ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart13d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_550191.1| Oryza sativa (japonica cultivar-group), mRNA 327 2e-86
2dbj|AK071635.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 2e-86
3dbj|AK060171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 2e-86
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
5dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
6dbj|AK103897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
7dbj|AK060437.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
9dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0... 100 8e-18
10gb|AY107198.1| Zea mays PCO093409 mRNA sequence 86 1e-13
11dbj|AK073348.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
12ref|XM_475641.1| Oryza sativa (japonica cultivar-group), predic... 74 5e-10
13ref|XM_470660.1| Oryza sativa (japonica cultivar-group), predic... 74 5e-10
14dbj|AK121854.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
15dbj|AK063518.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
16ref|NM_179949.2| Arabidopsis thaliana RSZ33; nucleic acid bindin... 72 2e-09
17ref|NM_115210.4| Arabidopsis thaliana RSZ32; nucleic acid bindin... 72 2e-09
18emb|AJ293801.1|ATH293801 Arabidopsis thaliana mRNA for splicing ... 72 2e-09
19gb|AY114563.1| Arabidopsis thaliana unknown protein (At2g37340) ... 72 2e-09
20gb|AY072315.1| Arabidopsis thaliana unknown protein (At2g37340) ... 72 2e-09
21emb|BX823008.1|CNS0A4UF Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
22emb|BX842469.1|CNS0A9NV Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
23dbj|AK176551.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 72 2e-09
24ref|NM_201891.1| Arabidopsis thaliana RSZ33; nucleic acid bindin... 66 1e-07
25ref|NM_180684.2| Arabidopsis thaliana RSZ32; nucleic acid bindin... 66 1e-07
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 66 1e-07
27gb|AY095996.1| Arabidopsis thaliana AT3g53500/F4P12_200 mRNA, co... 66 1e-07
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
29emb|BX824622.1|CNS0A6U2 Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
30emb|BX842466.1|CNS0A9HM Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
31emb|BX842463.1|CNS0A9GQ Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
32gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
33gb|DQ019628.1| Triticum aestivum alternative splicing regulator ... 66 1e-07
34dbj|AK176666.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 64 4e-07
35ref|NM_201890.1| Arabidopsis thaliana RSZ33; nucleic acid bindin... 62 2e-06
36gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ... 62 2e-06
37emb|BX842118.1|CNS09YBX Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
38emb|BX842467.1|CNS0A9JT Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
39gb|BT001034.1| Arabidopsis thaliana At3g53500/F4P12_200 mRNA, co... 58 3e-05
40emb|BX822765.1|CNS0A76B Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
41emb|BX822711.1|CNS0A76Y Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
42emb|BX823668.1|CNS0A4WJ Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
43emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BA... 58 3e-05
44gb|BT016393.1| Zea mays clone Contig226 mRNA sequence 48 0.026
45gb|BT017169.1| Zea mays clone EL01N0368H11.c mRNA sequence 46 0.10
46ref|XM_368131.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 46 0.10
47gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 gene se... 46 0.10
48emb|BX571971.4| Zebrafish DNA sequence from clone DKEY-227K11 in... 46 0.10
49gb|AY107211.1| Zea mays PCO136611 mRNA sequence 46 0.10
50gb|AY104051.1| Zea mays PCO093410 mRNA sequence 46 0.10
51ref|XM_960208.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.41
52ref|XM_330636.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.41
53gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.41
54dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.41
55gb|DQ202143.1| Uncultured bacterium clone CJRA29 16S ribosomal R... 42 1.6
56ref|XM_361555.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.6
57gb|AY307102.1| Erwinia amylovora putative repressor for the acrA... 42 1.6
58gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, comple... 42 1.6
59gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671... 42 1.6
60gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 42 1.6
61gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.6
62gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map... 42 1.6
63dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.6
64gb|AC006082.22| Mus musculus strain 129/Sv ES cell line CJ7 chro... 42 1.6
65gb|AC118542.20| Mus musculus strain C57BL/6J chromosome 16 clone... 42 1.6
66gb|AC096628.14| Mus musculus strain C57BL/6J chromosome 13 clone... 42 1.6
67emb|AL669965.13| Mouse DNA sequence from clone RP23-186F24 on ch... 42 1.6
68ref|XM_482855.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
69ref|XM_507589.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.3
70ref|XM_507265.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.3
71gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, com... 40 6.3
72gb|AC132245.3| Mus musculus BAC clone RP24-420M8 from chromosome... 40 6.3
73gb|AF411804.1| Lycopersicon esculentum BAC clone Clemson_ID 47I1... 40 6.3
74gb|AF517634.1| Drosophila melanogaster BIR-containing ubiquitin-... 40 6.3
75gb|AY119104.1| Drosophila melanogaster RE07981 full insert cDNA 40 6.3
76dbj|AB226186.1| Aspergillus oryzae cDNA, contig sequence: AoEST3045 40 6.3
77gb|AY628464.1| Coturnix coturnix chromosome Z ubiquitin-associat... 40 6.3
78dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 40 6.3
79ref|NM_141738.3| Drosophila melanogaster Bruce CG6303-RA (Bruce)... 40 6.3
80gb|AC008357.8| Drosophila melanogaster, chromosome 3R, region 86... 40 6.3
81gb|AC124526.6| Mus musculus BAC clone RP23-406P13 from chromosom... 40 6.3
82dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
83dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
84emb|BX825053.1|CNS0A6Q2 Arabidopsis thaliana Full-length cDNA Co... 40 6.3
85dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
86dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
87dbj|AK105607.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
88dbj|AK102279.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
89dbj|AK099519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
90dbj|AK070501.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
91dbj|AK062128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
92gb|AE003686.4| Drosophila melanogaster chromosome 3R, section 24... 40 6.3
93gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
94emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 40 6.3
95gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, compl... 40 6.3

>ref|XM_550191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1332

 Score =  327 bits (165), Expect = 2e-86
 Identities = 222/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 79  cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 138
           |||||||||||||| || ||||||||||| ||||||||| ||||||||||||| ||  ||
Sbjct: 160 cgttacggcggcaacacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 219

                                                                       
Query: 139 gaccttgaagacctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgag 198
           |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 220 gaccttgaagaccttttcggcagatatgggagagtgcgatatgtggatatgaagcacgag 279

                                                                       
Query: 199 tttgcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgat 258
           |||||||||||||| ||||||||| |  ||||||||||||| |||||||||||||| |||
Sbjct: 280 tttgcatttgttgaatttagtgatgctcgggatgctgatgaggcaaggtacaacctggat 339

                                                                       
Query: 259 ggtcgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtggc 318
           ||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 340 ggtcgggactttgatggaagccgcatgattgttgagtttgctaaaggggttccacgtggc 399

            
Query: 319 c 319
           |
Sbjct: 400 c 400



 Score =  125 bits (63), Expect = 1e-25
 Identities = 93/103 (90%)
 Strand = Plus / Plus

                                                                       
Query: 361 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
           ||||||||||||||| | || || || ||||||||||||||||||||||||||||| |||
Sbjct: 412 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 471

                                                      
Query: 421 gatggccattgggctcgtgactgcaaagctggcgactggaaaa 463
           ||||| || ||||| ||||||||||||||||| ||||||||||
Sbjct: 472 gatgggcactgggcccgtgactgcaaagctggagactggaaaa 514



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 55  atgcctcgctatgatgagcgtgatcgttacg 85
           ||||||||||||||||| |||||||| ||||
Sbjct: 124 atgcctcgctatgatgaccgtgatcgctacg 154



to top

>dbj|AK071635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100L15, full
           insert sequence
          Length = 1377

 Score =  327 bits (165), Expect = 2e-86
 Identities = 222/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 79  cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 138
           |||||||||||||| || ||||||||||| ||||||||| ||||||||||||| ||  ||
Sbjct: 205 cgttacggcggcaacacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 264

                                                                       
Query: 139 gaccttgaagacctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgag 198
           |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 265 gaccttgaagaccttttcggcagatatgggagagtgcgatatgtggatatgaagcacgag 324

                                                                       
Query: 199 tttgcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgat 258
           |||||||||||||| ||||||||| |  ||||||||||||| |||||||||||||| |||
Sbjct: 325 tttgcatttgttgaatttagtgatgctcgggatgctgatgaggcaaggtacaacctggat 384

                                                                       
Query: 259 ggtcgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtggc 318
           ||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 385 ggtcgggactttgatggaagccgcatgattgttgagtttgctaaaggggttccacgtggc 444

            
Query: 319 c 319
           |
Sbjct: 445 c 445



 Score =  125 bits (63), Expect = 1e-25
 Identities = 93/103 (90%)
 Strand = Plus / Plus

                                                                       
Query: 361 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
           ||||||||||||||| | || || || ||||||||||||||||||||||||||||| |||
Sbjct: 457 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 516

                                                      
Query: 421 gatggccattgggctcgtgactgcaaagctggcgactggaaaa 463
           ||||| || ||||| ||||||||||||||||| ||||||||||
Sbjct: 517 gatgggcactgggcccgtgactgcaaagctggagactggaaaa 559



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 55  atgcctcgctatgatgagcgtgatcgttacg 85
           ||||||||||||||||| |||||||| ||||
Sbjct: 169 atgcctcgctatgatgaccgtgatcgctacg 199



to top

>dbj|AK060171.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F07, full
           insert sequence
          Length = 1332

 Score =  327 bits (165), Expect = 2e-86
 Identities = 222/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 79  cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 138
           |||||||||||||| || ||||||||||| ||||||||| ||||||||||||| ||  ||
Sbjct: 160 cgttacggcggcaacacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 219

                                                                       
Query: 139 gaccttgaagacctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgag 198
           |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 220 gaccttgaagaccttttcggcagatatgggagagtgcgatatgtggatatgaagcacgag 279

                                                                       
Query: 199 tttgcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgat 258
           |||||||||||||| ||||||||| |  ||||||||||||| |||||||||||||| |||
Sbjct: 280 tttgcatttgttgaatttagtgatgctcgggatgctgatgaggcaaggtacaacctggat 339

                                                                       
Query: 259 ggtcgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtggc 318
           ||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 340 ggtcgggactttgatggaagccgcatgattgttgagtttgctaaaggggttccacgtggc 399

            
Query: 319 c 319
           |
Sbjct: 400 c 400



 Score =  125 bits (63), Expect = 1e-25
 Identities = 93/103 (90%)
 Strand = Plus / Plus

                                                                       
Query: 361 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
           ||||||||||||||| | || || || ||||||||||||||||||||||||||||| |||
Sbjct: 412 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 471

                                                      
Query: 421 gatggccattgggctcgtgactgcaaagctggcgactggaaaa 463
           ||||| || ||||| ||||||||||||||||| ||||||||||
Sbjct: 472 gatgggcactgggcccgtgactgcaaagctggagactggaaaa 514



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 55  atgcctcgctatgatgagcgtgatcgttacg 85
           ||||||||||||||||| |||||||| ||||
Sbjct: 124 atgcctcgctatgatgaccgtgatcgctacg 154



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  133 bits (67), Expect = 6e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                           
Query: 214     tttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgat 273
               ||||||||| |  ||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 2986890 tttagtgatgctcgggatgctgatgaggcaaggtacaacctggatggtcgggactttgat 2986831

                                                  
Query: 274     ggaagccgcatgattgtcgagtttgctaaaggggt 308
               ||||||||||||||||| |||||||||||||||||
Sbjct: 2986830 ggaagccgcatgattgttgagtttgctaaaggggt 2986796



 Score =  125 bits (63), Expect = 1e-25
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                           
Query: 361     cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
               ||||||||||||||| | || || || ||||||||||||||||||||||||||||| |||
Sbjct: 2986644 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 2986585

                                                          
Query: 421     gatggccattgggctcgtgactgcaaagctggcgactggaaaa 463
               ||||| || ||||| ||||||||||||||||| ||||||||||
Sbjct: 2986584 gatgggcactgggcccgtgactgcaaagctggagactggaaaa 2986542



 Score =  119 bits (60), Expect = 9e-24
 Identities = 84/92 (91%)
 Strand = Plus / Minus

                                                                           
Query: 79      cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 138
               |||||||||||||| || ||||||||||| ||||||||| ||||||||||||| ||  ||
Sbjct: 2987851 cgttacggcggcaacacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 2987792

                                               
Query: 139     gaccttgaagacctcttcggcagatatgggag 170
               |||||||||||||| |||||||||||||||||
Sbjct: 2987791 gaccttgaagaccttttcggcagatatgggag 2987760



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                          
Query: 169     agagtgcgacatgtggatatgaagcatgagtttgcatttgttg 211
               ||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 2987044 agagtgcgatatgtggatatgaagcacgagtttgcatttgttg 2987002



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 55      atgcctcgctatgatgagcgtgatcgttacg 85
               ||||||||||||||||| |||||||| ||||
Sbjct: 2987887 atgcctcgctatgatgaccgtgatcgctacg 2987857



to top

>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0011G08
          Length = 139490

 Score =  133 bits (67), Expect = 6e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                         
Query: 214   tttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgat 273
             ||||||||| |  ||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 68407 tttagtgatgctcgggatgctgatgaggcaaggtacaacctggatggtcgggactttgat 68348

                                                
Query: 274   ggaagccgcatgattgtcgagtttgctaaaggggt 308
             ||||||||||||||||| |||||||||||||||||
Sbjct: 68347 ggaagccgcatgattgttgagtttgctaaaggggt 68313



 Score =  125 bits (63), Expect = 1e-25
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                         
Query: 361   cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
             ||||||||||||||| | || || || ||||||||||||||||||||||||||||| |||
Sbjct: 68161 cgtgaatatatgggcagaggaccaccacctggttctggccgctgctttaactgtgggatt 68102

                                                        
Query: 421   gatggccattgggctcgtgactgcaaagctggcgactggaaaa 463
             ||||| || ||||| ||||||||||||||||| ||||||||||
Sbjct: 68101 gatgggcactgggcccgtgactgcaaagctggagactggaaaa 68059



 Score =  119 bits (60), Expect = 9e-24
 Identities = 84/92 (91%)
 Strand = Plus / Minus

                                                                         
Query: 79    cgttacggcggcaatacaaggctgtacgtgggtcgtcttccctcgcgcacccgcacaagg 138
             |||||||||||||| || ||||||||||| ||||||||| ||||||||||||| ||  ||
Sbjct: 69368 cgttacggcggcaacacgaggctgtacgtaggtcgtctttcctcgcgcacccggacccgg 69309

                                             
Query: 139   gaccttgaagacctcttcggcagatatgggag 170
             |||||||||||||| |||||||||||||||||
Sbjct: 69308 gaccttgaagaccttttcggcagatatgggag 69277



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                        
Query: 169   agagtgcgacatgtggatatgaagcatgagtttgcatttgttg 211
             ||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 68561 agagtgcgatatgtggatatgaagcacgagtttgcatttgttg 68519



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 55    atgcctcgctatgatgagcgtgatcgttacg 85
             ||||||||||||||||| |||||||| ||||
Sbjct: 69404 atgcctcgctatgatgaccgtgatcgctacg 69374



to top

>dbj|AK103897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150I04, full
           insert sequence
          Length = 1306

 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                       
Query: 202 gcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggt 261
           |||||| ||||||| ||||||||| | |||||||| ||||||||||||| ||||||||| 
Sbjct: 208 gcatttattgagttcagtgatccccgtgatgctgaggaagcaaggtacagccttgatggc 267

                                                                   
Query: 262 cgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 317
            | ||  ||||||||||||||||  |||| |||||||||||||||||||| |||||
Sbjct: 268 agggatgttgatggaagccgcattcttgttgagtttgctaaaggggttccacgtgg 323



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 361 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
           ||||||||||||||  | || |||||||||||  | || || || ||||||||||| |||
Sbjct: 337 cgtgaatatatggggagaggacctcctcctggaacaggtcggtgttttaactgtgggatt 396

                                                    
Query: 421 gatggccattgggctcgtgactgcaaagctggcgactggaa 461
           ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 397 gatggtcactgggcaagagactgcaaggctggtgactggaa 437



to top

>dbj|AK060437.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-D02, full
           insert sequence
          Length = 1152

 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                       
Query: 202 gcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggt 261
           |||||| ||||||| ||||||||| | |||||||  ||||||||||||||||||||||| 
Sbjct: 103 gcatttattgagttcagtgatccccgtgatgctggggaagcaaggtacaaccttgatggc 162

                                                                   
Query: 262 cgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 317
            | ||  ||||||||||||||||  |||| |||||||||||||||||||| |||||
Sbjct: 163 agggatgttgatggaagccgcattcttgttgagtttgctaaaggggttccacgtgg 218



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 361 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
           ||||||||||||||  | || |||||||||||  | || || || ||||||||||| |||
Sbjct: 232 cgtgaatatatggggagaggacctcctcctggaacaggtcggtgttttaactgtgggatt 291

                                                    
Query: 421 gatggccattgggctcgtgactgcaaagctggcgactggaa 461
           ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 292 gatggtcactgggcaagagactgcaaggctggtgactggaa 332



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                          
Query: 211    gagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgacttt 270
              ||||| ||||||||| | |||||||| |||||||||||||||||||||||  | ||  ||
Sbjct: 986919 gagttcagtgatccccgtgatgctgaggaagcaaggtacaaccttgatggcagggatgtt 986860

                                                    
Query: 271    gatggaagccgcatgattgtcgagtttgctaaaggggt 308
              ||||||||||||||  |||| |||||||||||||||||
Sbjct: 986859 gatggaagccgcattcttgttgagtttgctaaaggggt 986822



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                          
Query: 361    cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
              ||||||||||||||  | || |||||||||||  | || || || ||||||||||| |||
Sbjct: 986670 cgtgaatatatggggagaggacctcctcctggaacaggtcggtgttttaactgtgggatt 986611

                                                       
Query: 421    gatggccattgggctcgtgactgcaaagctggcgactggaa 461
              ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 986610 gatggtcactgggcaagagactgcaaggctggtgactggaa 986570



to top

>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04
          Length = 175439

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                         
Query: 211   gagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgacttt 270
             ||||| ||||||||| | |||||||| |||||||||||||||||||||||  | ||  ||
Sbjct: 77316 gagttcagtgatccccgtgatgctgaggaagcaaggtacaaccttgatggcagggatgtt 77257

                                                   
Query: 271   gatggaagccgcatgattgtcgagtttgctaaaggggt 308
             ||||||||||||||  |||| |||||||||||||||||
Sbjct: 77256 gatggaagccgcattcttgttgagtttgctaaaggggt 77219



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                         
Query: 361   cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
             ||||||||||||||  | || |||||||||||  | || || || ||||||||||| |||
Sbjct: 77067 cgtgaatatatggggagaggacctcctcctggaacaggtcggtgttttaactgtgggatt 77008

                                                      
Query: 421   gatggccattgggctcgtgactgcaaagctggcgactggaa 461
             ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 77007 gatggtcactgggcaagagactgcaaggctggtgactggaa 76967



to top

>gb|AY107198.1| Zea mays PCO093409 mRNA sequence
          Length = 1566

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 145/179 (81%)
 Strand = Plus / Plus

                                                                       
Query: 139 gaccttgaagacctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgag 198
           ||||| ||| |||| ||| ||| |||||||||| | ||| | |||||  |||||| ||| 
Sbjct: 422 gacctagaataccttttcagcaaatatgggagaattcgagaagtggagttgaagcgtgac 481

                                                                       
Query: 199 tttgcatttgttgagtttagtgatcccagggatgctgatgaagcaaggtacaaccttgat 258
           | ||||||  |||| || ||||| ||| | ||||||||||| |||  ||||||||| |||
Sbjct: 482 tatgcattcattgaattcagtgacccccgtgatgctgatgatgcacagtacaacctagat 541

                                                                      
Query: 259 ggtcgtgactttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 317
           ||  | ||| | |||||||||||||| ||||| || ||||||||||||||||| |||||
Sbjct: 542 ggcagggacgtcgatggaagccgcattattgttgaatttgctaaaggggttcctcgtgg 600



to top

>dbj|AK073348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025D08, full
           insert sequence
          Length = 1306

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                       
Query: 217 agtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatgga 276
           ||||||||| | ||||||||||||||| |||| ||||| |||||  | ||  ||||||||
Sbjct: 266 agtgatccccgtgatgctgatgaagcacggtataacctagatggcagggatgttgatgga 325

                                                    
Query: 277 agccgcatgattgtcgagtttgctaaaggggttccgcgtgg 317
           ||||||||  |||| |||||||||||||| ||||| |||||
Sbjct: 326 agccgcattcttgttgagtttgctaaaggagttccacgtgg 366



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 361 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
           ||||||||||||||  | || |||||||| ||  | || ||||| ||||||||||| |||
Sbjct: 383 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 442

                                                    
Query: 421 gatggccattgggctcgtgactgcaaagctggcgactggaa 461
           ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 443 gatggtcactgggcaagagactgcaaggctggtgactggaa 483



to top

>ref|XM_475641.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1017

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                       
Query: 149 acctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttg 208
           |||| ||| ||||||||||||| ||||||  ||||||| ||||| |||| | ||  ||||
Sbjct: 107 acctgttcagcagatatgggagggtgcgatttgtggatctgaagaatgaatatggctttg 166

                                    
Query: 209 ttgagtttagtgatcccagggatgc 233
           ||||||||||||||||| |||||||
Sbjct: 167 ttgagtttagtgatccccgggatgc 191



to top

>ref|XM_470660.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1170

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                       
Query: 217 agtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatgga 276
           ||||||||| | ||||||||||||||  |||| ||||| |||||  | ||  ||||||||
Sbjct: 427 agtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgttgatgga 486

                                                    
Query: 277 agccgcatgattgtcgagtttgctaaaggggttccgcgtgg 317
           ||||||||  |||| |||||||||||||| ||||| |||||
Sbjct: 487 agccgcattcttgttgagtttgctaaaggagttccacgtgg 527



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 361 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
           ||||||||||||||  | || |||||||| ||  | || ||||| ||||||||||| |||
Sbjct: 544 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 603

                                                    
Query: 421 gatggccattgggctcgtgactgcaaagctggcgactggaa 461
           ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 604 gatggtcactgggcaagagactgcaaggctggtgactggaa 644



to top

>dbj|AK121854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102C01, full
           insert sequence
          Length = 1464

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                       
Query: 149 acctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttg 208
           |||| ||| ||||||||||||| ||||||  ||||||| ||||| |||| | ||  ||||
Sbjct: 222 acctgttcagcagatatgggagggtgcgatttgtggatctgaagaatgaatatggctttg 281

                                    
Query: 209 ttgagtttagtgatcccagggatgc 233
           ||||||||||||||||| |||||||
Sbjct: 282 ttgagtttagtgatccccgggatgc 306



to top

>dbj|AK063518.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H05, full
           insert sequence
          Length = 1563

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                       
Query: 149 acctcttcggcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttg 208
           |||| ||| ||||||||||||| ||||||  ||||||| ||||| |||| | ||  ||||
Sbjct: 259 acctgttcagcagatatgggagggtgcgatttgtggatctgaagaatgaatatggctttg 318

                                    
Query: 209 ttgagtttagtgatcccagggatgc 233
           ||||||||||||||||| |||||||
Sbjct: 319 ttgagtttagtgatccccgggatgc 343



to top

>ref|NM_179949.2| Arabidopsis thaliana RSZ33; nucleic acid binding AT2G37340 (RSZ33)
           transcript variant AT2G37340.1 mRNA, complete cds
          Length = 1162

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 217
           ||||||| || ||||||||| |||||||||||||||  || | ||| || ||||| ||| 
Sbjct: 159 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 218

                                                                       
Query: 218 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 277
           |||||||| | ||||||||||| |||||  |  |||| || || || |||||||||||||
Sbjct: 219 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 278

                               
Query: 278 gccgcatgattgtcgagttt 297
           | ||||| | ||| ||||||
Sbjct: 279 gtcgcatcactgtggagttt 298



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 357 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 416

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 417 actggaa 423



to top

>ref|NM_115210.4| Arabidopsis thaliana RSZ32; nucleic acid binding AT3G53500 (RSZ32)
           transcript variant AT3G53500.2 mRNA, complete cds
          Length = 1139

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Plus

                                                                       
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 217
           ||||||| || ||||| ||| ||||||||||||||| ||| | ||| |||||||| ||||
Sbjct: 168 gcagatacggaagagtacgagatgtggatatgaagcgtgattatgcctttgttgaattta 227

                                       
Query: 218 gtgatcccagggatgctgatgaagcaag 245
           |||||||  | ||||||||||| |||||
Sbjct: 228 gtgatcctcgtgatgctgatgacgcaag 255



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 385 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
           |||||||||||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||
Sbjct: 356 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 415

                            
Query: 445 aaagctggcgactggaa 461
           | ||| || ||||||||
Sbjct: 416 acagcaggagactggaa 432



to top

>emb|AJ293801.1|ATH293801 Arabidopsis thaliana mRNA for splicing factor RSZ33
          Length = 1140

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 217
           ||||||| || ||||||||| |||||||||||||||  || | ||| || ||||| ||| 
Sbjct: 161 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 220

                                                                       
Query: 218 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 277
           |||||||| | ||||||||||| |||||  |  |||| || || || |||||||||||||
Sbjct: 221 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 280

                               
Query: 278 gccgcatgattgtcgagttt 297
           | ||||| | ||| ||||||
Sbjct: 281 gtcgcatcactgtggagttt 300



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 359 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 418

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 419 actggaa 425



to top

>gb|AY114563.1| Arabidopsis thaliana unknown protein (At2g37340) mRNA, complete cds
          Length = 1039

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 217
           ||||||| || ||||||||| |||||||||||||||  || | ||| || ||||| ||| 
Sbjct: 95  gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 154

                                                                       
Query: 218 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 277
           |||||||| | ||||||||||| |||||  |  |||| || || || |||||||||||||
Sbjct: 155 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 214

                               
Query: 278 gccgcatgattgtcgagttt 297
           | ||||| | ||| ||||||
Sbjct: 215 gtcgcatcactgtggagttt 234



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 293 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 352

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 353 actggaa 359



to top

>gb|AY072315.1| Arabidopsis thaliana unknown protein (At2g37340) mRNA, complete cds
          Length = 1137

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 217
           ||||||| || ||||||||| |||||||||||||||  || | ||| || ||||| ||| 
Sbjct: 157 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 216

                                                                       
Query: 218 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 277
           |||||||| | ||||||||||| |||||  |  |||| || || || |||||||||||||
Sbjct: 217 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 276

                               
Query: 278 gccgcatgattgtcgagttt 297
           | ||||| | ||| ||||||
Sbjct: 277 gtcgcatcactgtggagttt 296



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 355 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 414

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 415 actggaa 421



to top

>emb|BX823008.1|CNS0A4UF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB80ZA05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1054

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Plus

                                                                       
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 217
           ||||||| || ||||| ||| ||||||||||||||| ||| | ||| |||||||| ||||
Sbjct: 168 gcagatacggaagagtacgagatgtggatatgaagcgtgattatgcctttgttgaattta 227

                                       
Query: 218 gtgatcccagggatgctgatgaagcaag 245
           |||||||  | ||||||||||| |||||
Sbjct: 228 gtgatcctcgtgatgctgatgacgcaag 255



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 385 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
           |||||||||||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||
Sbjct: 356 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 415

                            
Query: 445 aaagctggcgactggaa 461
           | ||| || ||||||||
Sbjct: 416 acagcaggagactggaa 432



to top

>emb|BX842469.1|CNS0A9NV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH7ZF04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1091

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 217
           ||||||| || ||||||||| |||||||||||||||  || | ||| || ||||| ||| 
Sbjct: 159 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 218

                                                                       
Query: 218 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 277
           |||||||| | ||||||||||| |||||  |  |||| || || || |||||||||||||
Sbjct: 219 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 278

                               
Query: 278 gccgcatgattgtcgagttt 297
           | ||||| | ||| ||||||
Sbjct: 279 gtcgcatcactgtggagttt 298



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgca 445
           |||| ||||| |||||||||||  | ||||| |||||||||||||||||||
Sbjct: 357 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgca 407



to top

>dbj|AK176551.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-07-D13
          Length = 1108

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 217
           ||||||| || ||||||||| |||||||||||||||  || | ||| || ||||| ||| 
Sbjct: 164 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttg 223

                                                                       
Query: 218 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 277
           |||||||| | ||||||||||| |||||  |  |||| || || || |||||||||||||
Sbjct: 224 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 283

                               
Query: 278 gccgcatgattgtcgagttt 297
           | ||||| | ||| ||||||
Sbjct: 284 gtcgcatcactgtggagttt 303



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 362 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 421

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 422 actggaa 428



to top

>ref|NM_201891.1| Arabidopsis thaliana RSZ33; nucleic acid binding AT2G37340 (RSZ33)
           transcript variant AT2G37340.3 mRNA, complete cds
          Length = 1369

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 105/129 (81%)
 Strand = Plus / Plus

                                                                       
Query: 169 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 228
           ||||||||| |||||||||||||||  || | ||| || ||||| ||| |||||||| | 
Sbjct: 377 agagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttggtgatccccgt 436

                                                                       
Query: 229 gatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaagccgcatgatt 288
           ||||||||||| |||||  |  |||| || || || |||||||||||||| ||||| | |
Sbjct: 437 gatgctgatgatgcaagacattacctggacggacgagactttgatggaagtcgcatcact 496

                    
Query: 289 gtcgagttt 297
           || ||||||
Sbjct: 497 gtggagttt 505



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 564 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 623

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 624 actggaa 630



to top

>ref|NM_180684.2| Arabidopsis thaliana RSZ32; nucleic acid binding AT3G53500 (RSZ32)
           transcript variant AT3G53500.1 mRNA, complete cds
          Length = 1441

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 169 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 228
           ||||| ||| ||||||||||||||| ||| | ||| |||||||| |||||||||||  | 
Sbjct: 481 agagtacgagatgtggatatgaagcgtgattatgcctttgttgaatttagtgatcctcgt 540

                            
Query: 229 gatgctgatgaagcaag 245
           ||||||||||| |||||
Sbjct: 541 gatgctgatgacgcaag 557



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 385 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
           |||||||||||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||
Sbjct: 658 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 717

                            
Query: 445 aaagctggcgactggaa 461
           | ||| || ||||||||
Sbjct: 718 acagcaggagactggaa 734



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                           
Query: 217     agtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatgga 276
               ||||||||| | ||||||||||||||  |||| ||||| |||||  | ||  ||||||||
Sbjct: 9826208 agtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgttgatgga 9826149

                                            
Query: 277     agccgcatgattgtcgagtttgctaaagg 305
               ||||||||  |||| ||||||||||||||
Sbjct: 9826148 agccgcattcttgttgagtttgctaaagg 9826120



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                           
Query: 361     cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
               ||||||||||||||  | || |||||||| ||  | || ||||| ||||||||||| |||
Sbjct: 9825954 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 9825895

                                                        
Query: 421     gatggccattgggctcgtgactgcaaagctggcgactggaa 461
               ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 9825894 gatggtcactgggcaagagactgcaaggctggtgactggaa 9825854



to top

>gb|AY095996.1| Arabidopsis thaliana AT3g53500/F4P12_200 mRNA, complete cds
          Length = 1369

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 169 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 228
           ||||| ||| ||||||||||||||| ||| | ||| |||||||| |||||||||||  | 
Sbjct: 410 agagtacgagatgtggatatgaagcgtgattatgcctttgttgaatttagtgatcctcgt 469

                            
Query: 229 gatgctgatgaagcaag 245
           ||||||||||| |||||
Sbjct: 470 gatgctgatgacgcaag 486



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 385 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
           |||||||||||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||
Sbjct: 587 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 646

                            
Query: 445 aaagctggcgactggaa 461
           | ||| || ||||||||
Sbjct: 647 acagcaggagactggaa 663



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                           
Query: 217     agtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatgga 276
               ||||||||| | ||||||||||||||  |||| ||||| |||||  | ||  ||||||||
Sbjct: 9824329 agtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgttgatgga 9824270

                                            
Query: 277     agccgcatgattgtcgagtttgctaaagg 305
               ||||||||  |||| ||||||||||||||
Sbjct: 9824269 agccgcattcttgttgagtttgctaaagg 9824241



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                           
Query: 361     cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
               ||||||||||||||  | || |||||||| ||  | || ||||| ||||||||||| |||
Sbjct: 9824075 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 9824016

                                                        
Query: 421     gatggccattgggctcgtgactgcaaagctggcgactggaa 461
               ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 9824015 gatggtcactgggcaagagactgcaaggctggtgactggaa 9823975



to top

>emb|BX824622.1|CNS0A6U2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH60ZB09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1400

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 169 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 228
           ||||| ||| ||||||||||||||| ||| | ||| |||||||| |||||||||||  | 
Sbjct: 481 agagtacgagatgtggatatgaagcgtgattatgcctttgttgaatttagtgatcctcgt 540

                            
Query: 229 gatgctgatgaagcaag 245
           ||||||||||| |||||
Sbjct: 541 gatgctgatgacgcaag 557



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 385 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
           |||||||||||||| |||||  |||| |||||  | |||||| | ||||| || ||||||
Sbjct: 658 cctcctggttctggtcgctgtattaattgtggtgtcgatggcaactgggcccgagactgc 717

                            
Query: 445 aaagctggcgactggaa 461
           | ||| || ||||||||
Sbjct: 718 acagcaggagactggaa 734



to top

>emb|BX842466.1|CNS0A9HM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH11ZG06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1261

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 105/129 (81%)
 Strand = Plus / Plus

                                                                       
Query: 169 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 228
           ||||||||| |||||||||||||||  || | ||| || ||||| ||| |||||||| | 
Sbjct: 377 agagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttggtgatccccgt 436

                                                                       
Query: 229 gatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaagccgcatgatt 288
           ||||||||||| |||||  |  |||| || || || |||||||||||||| ||||| | |
Sbjct: 437 gatgctgatgatgcaagacattacctggacggacgagactttgatggaagtcgcatcact 496

                    
Query: 289 gtcgagttt 297
           || ||||||
Sbjct: 497 gtggagttt 505



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| ||||| |||||  | ||||| ||||||||||||||||| | ||| || |
Sbjct: 564 ctggtcgctgttttaattgtggtgtagatggtcattgggctcgtgactgaacagcagggg 623

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 624 actggaa 630



to top

>emb|BX842463.1|CNS0A9GQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS58ZG03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1317

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 105/129 (81%)
 Strand = Plus / Plus

                                                                       
Query: 169 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 228
           ||||||||| |||||||||||||||  || | ||| || ||||| ||| |||||||| | 
Sbjct: 370 agagtgcgagatgtggatatgaagcgagattatgctttcgttgaatttggtgatccccgt 429

                                                                       
Query: 229 gatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaagccgcatgatt 288
           ||||||||||| |||||  |  |||| || || || |||||||||||||| ||||| | |
Sbjct: 430 gatgctgatgatgcaagacattacctggacggacgagactttgatggaagtcgcatcact 489

                    
Query: 289 gtcgagttt 297
           || ||||||
Sbjct: 490 gtggagttt 498



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 557 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 616

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 617 actggaa 623



to top

>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0013D02, complete sequence
          Length = 131883

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                         
Query: 217   agtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatgga 276
             ||||||||| | ||||||||||||||  |||| ||||| |||||  | ||  ||||||||
Sbjct: 48289 agtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgttgatgga 48348

                                          
Query: 277   agccgcatgattgtcgagtttgctaaagg 305
             ||||||||  |||| ||||||||||||||
Sbjct: 48349 agccgcattcttgttgagtttgctaaagg 48377



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                         
Query: 361   cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
             ||||||||||||||  | || |||||||| ||  | || ||||| ||||||||||| |||
Sbjct: 48543 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 48602

                                                      
Query: 421   gatggccattgggctcgtgactgcaaagctggcgactggaa 461
             ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 48603 gatggtcactgggcaagagactgcaaggctggtgactggaa 48643



to top

>gb|DQ019628.1| Triticum aestivum alternative splicing regulator (RSZ38) mRNA,
           complete cds
          Length = 1255

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 361 cgtgaatatatgggccgggggcctcctcctggttctggccgctgctttaactgtggcatt 420
           ||||||||| ||||  | ||||||||||| ||  | ||||| || || |||||||| |||
Sbjct: 329 cgtgaatatgtgggaagagggcctcctccaggaacaggccgttgtttcaactgtggtatt 388

                                                    
Query: 421 gatggccattgggctcgtgactgcaaagctggcgactggaa 461
           ||||| ||||||||  | |||||||||||||| ||||||||
Sbjct: 389 gatggtcattgggccagggactgcaaagctggtgactggaa 429



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 269 ttgatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 317
           ||||||| |||||||| ||||| |||||||||||||||||||| |||||
Sbjct: 261 ttgatgggagccgcattattgttgagtttgctaaaggggttccacgtgg 309



to top

>dbj|AK176666.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-20-J02
          Length = 1149

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 113/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagcatgagtttgcatttgttgagttta 217
           ||||||| || ||||||||| |||||||||||||||  || | ||| || ||||  ||| 
Sbjct: 160 gcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgttgtatttg 219

                                                                       
Query: 218 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 277
           |||||||| | ||||||||||| |||||  |  |||| || || || |||||||||||||
Sbjct: 220 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 279

                               
Query: 278 gccgcatgattgtcgagttt 297
           | ||||| | ||| ||||||
Sbjct: 280 gtcgcatcactgtggagttt 299



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 358 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 417

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 418 actggaa 424



to top

>ref|NM_201890.1| Arabidopsis thaliana RSZ33; nucleic acid binding AT2G37340 (RSZ33)
           transcript variant AT2G37340.2 mRNA, complete cds
          Length = 1306

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 501 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 560

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 561 actggaa 567



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagc 193
           ||||||| || ||||||||| |||||||||||||||
Sbjct: 163 gcagatacggaagagtgcgagatgtggatatgaagc 198



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 218 gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 277
           |||||||| | ||||||||||| |||||  |  |||| || || || |||||||||||||
Sbjct: 363 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 422

                               
Query: 278 gccgcatgattgtcgagttt 297
           | ||||| | ||| ||||||
Sbjct: 423 gtcgcatcactgtggagttt 442



to top

>gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete
             sequence
          Length = 119001

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 395   ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
             |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 40384 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 40325

                    
Query: 455   actggaa 461
             |||||||
Sbjct: 40324 actggaa 40318



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 169   agagtgcgacatgtggatatgaagc 193
             ||||||||| |||||||||||||||
Sbjct: 40816 agagtgcgagatgtggatatgaagc 40792



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                         
Query: 218   gtgatcccagggatgctgatgaagcaaggtacaaccttgatggtcgtgactttgatggaa 277
             |||||||| | ||||||||||| |||||  |  |||| || || || |||||||||||||
Sbjct: 40627 gtgatccccgtgatgctgatgatgcaagacattacctggacggacgagactttgatggaa 40568

                                 
Query: 278   gccgcatgattgtcgagttt 297
             | ||||| | ||| ||||||
Sbjct: 40567 gtcgcatcactgtggagttt 40548



to top

>emb|BX842118.1|CNS09YBX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB65ZA05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1317

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 169 agagtgcgacatgtggatatgaagcatgagtttgcatttgttgagtttagtgatcccagg 228
           ||||| ||| ||||||||||||||| ||| | ||| |||||||| |||||||||||  | 
Sbjct: 395 agagtacgagatgtggatatgaagcgtgattatgcctttgttgaatttagtgatcctcgt 454

                      
Query: 229 gatgctgatga 239
           |||||||||||
Sbjct: 455 gatgctgatga 465



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 385 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
           |||||||||||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||
Sbjct: 572 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 631

                            
Query: 445 aaagctggcgactggaa 461
           | ||| || ||||||||
Sbjct: 632 acagcaggagactggaa 648



to top

>emb|BX842467.1|CNS0A9JT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH29ZA08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1232

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 395 ctggccgctgctttaactgtggcattgatggccattgggctcgtgactgcaaagctggcg 454
           |||| ||||| |||||||||||  | ||||| ||||||||||||||||||| ||| || |
Sbjct: 501 ctggtcgctgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcagggg 560

                  
Query: 455 actggaa 461
           |||||||
Sbjct: 561 actggaa 567



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 158 gcagatatgggagagtgcgacatgtggatatgaagc 193
           ||||||| || ||||||||| |||||||||||||||
Sbjct: 163 gcagatacggaagagtgcgagatgtggatatgaagc 198



to top

>gb|BT001034.1| Arabidopsis thaliana At3g53500/F4P12_200 mRNA, complete cds
          Length = 732

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 385 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
           |||||||||||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||
Sbjct: 160 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 219

                            
Query: 445 aaagctggcgactggaa 461
           | ||| || ||||||||
Sbjct: 220 acagcaggagactggaa 236



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 187 atgaagcatgagtttgcatttgttgagtttagtgatcccagggatgctgatgaagcaag 245
           ||||||| ||| | ||| |||||||| |||||||||||  | ||||||||||| |||||
Sbjct: 1   atgaagcgtgattatgcctttgttgaatttagtgatcctcgtgatgctgatgacgcaag 59



to top

>emb|BX822765.1|CNS0A76B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB63ZA04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1703

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                        
Query: 385  cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
            |||||||||||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||
Sbjct: 958  cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 1017

                             
Query: 445  aaagctggcgactggaa 461
            | ||| || ||||||||
Sbjct: 1018 acagcaggagactggaa 1034



to top

>emb|BX822711.1|CNS0A76Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB59ZG11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1708

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                        
Query: 385  cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
            |||||||||||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||
Sbjct: 959  cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 1018

                             
Query: 445  aaagctggcgactggaa 461
            | ||| || ||||||||
Sbjct: 1019 acagcaggagactggaa 1035



to top

>emb|BX823668.1|CNS0A4WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS64ZE12 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1446

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 385 cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
           |||||||||||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||
Sbjct: 693 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 752

                            
Query: 445 aaagctggcgactggaa 461
           | ||| || ||||||||
Sbjct: 753 acagcaggagactggaa 769



to top

>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12
          Length = 144628

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 385   cctcctggttctggccgctgctttaactgtggcattgatggccattgggctcgtgactgc 444
             |||||||||||||| ||||| ||||| |||||  | |||||||| ||||| || ||||||
Sbjct: 76194 cctcctggttctggtcgctgttttaattgtggtgtcgatggccactgggcccgagactgc 76135

                              
Query: 445   aaagctggcgactggaa 461
             | ||| || ||||||||
Sbjct: 76134 acagcaggagactggaa 76118



to top

>gb|BT016393.1| Zea mays clone Contig226 mRNA sequence
          Length = 1003

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 278 gccgcatgattgtcgagtttgctaaaggggttccgcgtgg 317
           ||||||| ||||| || ||||||||||||||||| |||||
Sbjct: 8   gccgcattattgttgaatttgctaaaggggttcctcgtgg 47



to top

>gb|BT017169.1| Zea mays clone EL01N0368H11.c mRNA sequence
          Length = 1011

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 271 gatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 317
           ||||||||||| || ||||| || ||||||||||| ||||| |||||
Sbjct: 68  gatggaagccgtattattgttgaatttgctaaaggagttcctcgtgg 114



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 406 tttaactgtggcattgatggccattgggctcgtgactgcaaagctggcgactggaa 461
           ||||||||||| || ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 173 tttaactgtggaatggatggtcactgggcaagggactgcaaggctggtgactggaa 228



to top

>ref|XM_368131.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG01113.4) partial mRNA
          Length = 513

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 342 ccgtggccgtggtggtgaccgtg 364
           |||||||||||||||||||||||
Sbjct: 354 ccgtggccgtggtggtgaccgtg 376



to top

>gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 gene sequence
          Length = 110467

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 342  ccgtggccgtggtggtgaccgtg 364
            |||||||||||||||||||||||
Sbjct: 3526 ccgtggccgtggtggtgaccgtg 3504



to top

>emb|BX571971.4| Zebrafish DNA sequence from clone DKEY-227K11 in linkage group 18,
             complete sequence
          Length = 153139

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 195   tgagtttgcatttgttgagttta 217
             |||||||||||||||||||||||
Sbjct: 48330 tgagtttgcatttgttgagttta 48308



to top

>gb|AY107211.1| Zea mays PCO136611 mRNA sequence
          Length = 1362

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 271 gatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 317
           |||||||| |||||  |||| ||||||||||||||||| || |||||
Sbjct: 308 gatggaagtcgcattgttgttgagtttgctaaaggggtcccacgtgg 354



to top

>gb|AY104051.1| Zea mays PCO093410 mRNA sequence
          Length = 1288

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 271 gatggaagccgcatgattgtcgagtttgctaaaggggttccgcgtgg 317
           ||||||||||| || ||||| || ||||||||||| ||||| |||||
Sbjct: 327 gatggaagccgtattattgttgaatttgctaaaggagttcctcgtgg 373



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 406 tttaactgtggcattgatggccattgggctcgtgactgcaaagctggcgactggaa 461
           ||||||||||| || ||||| || |||||  | |||||||| ||||| ||||||||
Sbjct: 432 tttaactgtggaatggatggtcactgggcaagggactgcaaggctggtgactggaa 487



to top

>ref|XM_960208.1| Neurospora crassa OR74A hypothetical protein (NCU03201.1) partial
           mRNA
          Length = 258

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 332 gtgaccgtgaccgtggccgtgg 353
           ||||||||||||||||||||||
Sbjct: 114 gtgaccgtgaccgtggccgtgg 93



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 332 gtgaccgtgaccgtggccgtggtggtgaccgtga 365
           ||||||||| ||||||||||||  ||||||||||
Sbjct: 108 gtgaccgtggccgtggccgtggccgtgaccgtga 75



to top

>ref|XM_330636.1| Neurospora crassa OR74A hypothetical protein (NCU03201.1) partial
           mRNA
          Length = 258

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 332 gtgaccgtgaccgtggccgtgg 353
           ||||||||||||||||||||||
Sbjct: 114 gtgaccgtgaccgtggccgtgg 93



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 332 gtgaccgtgaccgtggccgtggtggtgaccgtga 365
           ||||||||| ||||||||||||  ||||||||||
Sbjct: 108 gtgaccgtggccgtggccgtggccgtgaccgtga 75



to top

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 332     gtgaccgtgaccgtggccgtgg 353
               ||||||||||||||||||||||
Sbjct: 3067576 gtgaccgtgaccgtggccgtgg 3067597



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 328     ggaggtgaccgtgaccgtggcc 349
               ||||||||||||||||||||||
Sbjct: 2543367 ggaggtgaccgtgaccgtggcc 2543388



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 332     gtgaccgtgaccgtggccgtggtg 355
               |||||||||||||||||| |||||
Sbjct: 2275379 gtgaccgtgaccgtggccttggtg 2275356



to top

>gb|DQ202143.1| Uncultured bacterium clone CJRA29 16S ribosomal RNA gene, partial
           sequence
          Length = 1364

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 428 attgggctcgtgactgcaaagctgg 452
           |||||||| ||||||||||||||||
Sbjct: 609 attgggcttgtgactgcaaagctgg 633



to top

>ref|XM_361555.1| Magnaporthe grisea 70-15 hypothetical protein (MG04029.4) partial
            mRNA
          Length = 3027

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 332  gtgaccgtgaccgtggccgtggtgg 356
            ||||||||||||||| |||||||||
Sbjct: 1358 gtgaccgtgaccgtgaccgtggtgg 1382



to top

>gb|AY307102.1| Erwinia amylovora putative repressor for the acrAB genes (acrR),
            membrane-fusion protein (acrA), and multidrug efflux
            transporter (acrB) genes, complete cds
          Length = 6580

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 284  tgattgtcgagtttgctaaag 304
            |||||||||||||||||||||
Sbjct: 5835 tgattgtcgagtttgctaaag 5855



to top

>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence
          Length = 190816

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 332    gtgaccgtgaccgtggccgtg 352
              |||||||||||||||||||||
Sbjct: 151365 gtgaccgtgaccgtggccgtg 151385



to top

>gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671i11 map 16, complete
            sequence
          Length = 186272

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 218  gtgatcccagggatgctgatg 238
            |||||||||||||||||||||
Sbjct: 4994 gtgatcccagggatgctgatg 4974



to top

>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 339     tgaccgtggccgtggtggtga 359
               |||||||||||||||||||||
Sbjct: 2113386 tgaccgtggccgtggtggtga 2113366



to top

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 339     tgaccgtggccgtggtggtga 359
               |||||||||||||||||||||
Sbjct: 3771540 tgaccgtggccgtggtggtga 3771560



to top

>gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map 16, complete sequence
          Length = 217939

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 218    gtgatcccagggatgctgatg 238
              |||||||||||||||||||||
Sbjct: 135066 gtgatcccagggatgctgatg 135086



to top

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 337    cgtgaccgtggccgtggtggtgacc 361
              |||||||||||||||| ||||||||
Sbjct: 331866 cgtgaccgtggccgtgatggtgacc 331842



to top

>gb|AC006082.22| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 16 clone
             ct7-342a4, complete sequence
          Length = 154201

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   gtgatcccagggatgctgatg 238
             |||||||||||||||||||||
Sbjct: 26615 gtgatcccagggatgctgatg 26635



to top

>gb|AC118542.20| Mus musculus strain C57BL/6J chromosome 16 clone rp23-117j21, complete
             sequence
          Length = 215057

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   gtgatcccagggatgctgatg 238
             |||||||||||||||||||||
Sbjct: 29227 gtgatcccagggatgctgatg 29247



to top

>gb|AC096628.14| Mus musculus strain C57BL/6J chromosome 13 clone rp23-81n4, complete
             sequence
          Length = 194818

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 332   gtgaccgtgaccgtggccgtg 352
             |||||||||||||||||||||
Sbjct: 88453 gtgaccgtgaccgtggccgtg 88433



to top

>emb|AL669965.13| Mouse DNA sequence from clone RP23-186F24 on chromosome 4, complete
              sequence
          Length = 181196

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 250    aaccttgatggtcgtgactttgatg 274
              |||||||||||| ||||||||||||
Sbjct: 130622 aaccttgatggttgtgactttgatg 130646



to top

>ref|XM_482855.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1787

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ccgtgaccgtggccgtggtggtga 359
           ||||| ||||||||||||||||||
Sbjct: 260 ccgtggccgtggccgtggtggtga 237



to top

>ref|XM_507589.1| PREDICTED Oryza sativa (japonica cultivar-group), P0104B02.41 mRNA
          Length = 1972

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ccgtgaccgtggccgtggtggtga 359
           ||||| ||||||||||||||||||
Sbjct: 263 ccgtggccgtggccgtggtggtga 240



to top

>ref|XM_507265.2| PREDICTED Oryza sativa (japonica cultivar-group), P0104B02.41 mRNA
          Length = 2555

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ccgtgaccgtggccgtggtggtga 359
           ||||| ||||||||||||||||||
Sbjct: 264 ccgtggccgtggccgtggtggtga 241



to top

>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    ggaggaggtgaccgtgaccg 344
              ||||||||||||||||||||
Sbjct: 320882 ggaggaggtgaccgtgaccg 320901



to top

>gb|AC132245.3| Mus musculus BAC clone RP24-420M8 from chromosome 13, complete sequence
          Length = 148654

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   tggccgtggtggtgaccgtg 364
             ||||||||||||||||||||
Sbjct: 34443 tggccgtggtggtgaccgtg 34462



to top

>gb|AF411804.1| Lycopersicon esculentum BAC clone Clemson_ID 47I13, complete sequence
          Length = 100810

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   catttgttgagtttagtgat 222
             ||||||||||||||||||||
Sbjct: 97390 catttgttgagtttagtgat 97371



to top

>gb|AF517634.1| Drosophila melanogaster BIR-containing ubiquitin-conjugating enzyme
            (Bruce) mRNA, complete cds
          Length = 14794

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  cgtggccaaggaggaggagg 332
            ||||||||||||||||||||
Sbjct: 2446 cgtggccaaggaggaggagg 2465



to top

>gb|AY119104.1| Drosophila melanogaster RE07981 full insert cDNA
          Length = 3617

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  cgtggccaaggaggaggagg 332
            ||||||||||||||||||||
Sbjct: 2446 cgtggccaaggaggaggagg 2465



to top

>dbj|AB226186.1| Aspergillus oryzae cDNA, contig sequence: AoEST3045
          Length = 1121

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 331 ggtgaccgtgaccgtggccgtggt 354
           |||||||||| |||||||||||||
Sbjct: 164 ggtgaccgtggccgtggccgtggt 187



to top

>gb|AY628464.1| Coturnix coturnix chromosome Z ubiquitin-associated protein 2 (UBAP2)
            gene, intron 1
          Length = 1223

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  gacatgtggatatgaagcat 195
            ||||||||||||||||||||
Sbjct: 1041 gacatgtggatatgaagcat 1060



to top

>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 331    ggtgaccgtgaccgtggccgtggt 354
              |||||||||| |||||||||||||
Sbjct: 590816 ggtgaccgtggccgtggccgtggt 590793



to top

>ref|NM_141738.3| Drosophila melanogaster Bruce CG6303-RA (Bruce), mRNA
          Length = 14793

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  cgtggccaaggaggaggagg 332
            ||||||||||||||||||||
Sbjct: 2445 cgtggccaaggaggaggagg 2464



to top

>gb|AC008357.8| Drosophila melanogaster, chromosome 3R, region 86A-86A, BAC clone
             BACR03L12, complete sequence
          Length = 190672

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   cgtggccaaggaggaggagg 332
             ||||||||||||||||||||
Sbjct: 62091 cgtggccaaggaggaggagg 62072



to top

>gb|AC124526.6| Mus musculus BAC clone RP23-406P13 from chromosome 18, complete
             sequence
          Length = 203854

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ttgcatttgttgagtttagt 219
             ||||||||||||||||||||
Sbjct: 38939 ttgcatttgttgagtttagt 38920



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 333      tgaccgtgaccgtggccgtg 352
                ||||||||||||||||||||
Sbjct: 27301534 tgaccgtgaccgtggccgtg 27301515



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 336      ccgtgaccgtggccgtggtggtga 359
                ||||| ||||||||||||||||||
Sbjct: 22987465 ccgtggccgtggccgtggtggtga 22987488



to top

>emb|BX825053.1|CNS0A6Q2 Arabidopsis thaliana Full-length cDNA Complete sequence from
          clone GSLTPGH91ZG09 of Hormone Treated Callus of strain
          col-0 of Arabidopsis thaliana (thale cress)
          Length = 1425

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 52 agaatgcctcgctatgatga 71
          ||||||||||||||||||||
Sbjct: 68 agaatgcctcgctatgatga 87



to top

>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0104B02
          Length = 169588

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 336    ccgtgaccgtggccgtggtggtga 359
              ||||| ||||||||||||||||||
Sbjct: 161303 ccgtggccgtggccgtggtggtga 161326



to top

>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 336   ccgtgaccgtggccgtggtggtga 359
             ||||| ||||||||||||||||||
Sbjct: 47193 ccgtggccgtggccgtggtggtga 47216



to top

>dbj|AK105607.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B01, full
           insert sequence
          Length = 1786

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ccgtgaccgtggccgtggtggtga 359
           ||||| ||||||||||||||||||
Sbjct: 260 ccgtggccgtggccgtggtggtga 237



to top

>dbj|AK102279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089E10, full
           insert sequence
          Length = 1972

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ccgtgaccgtggccgtggtggtga 359
           ||||| ||||||||||||||||||
Sbjct: 263 ccgtggccgtggccgtggtggtga 240



to top

>dbj|AK099519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030E05, full
           insert sequence
          Length = 1092

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 333 tgaccgtgaccgtggccgtg 352
           ||||||||||||||||||||
Sbjct: 645 tgaccgtgaccgtggccgtg 626



to top

>dbj|AK070501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054A11, full
           insert sequence
          Length = 2555

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 ccgtgaccgtggccgtggtggtga 359
           ||||| ||||||||||||||||||
Sbjct: 264 ccgtggccgtggccgtggtggtga 241



to top

>dbj|AK062128.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D12, full
           insert sequence
          Length = 1156

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 333 tgaccgtgaccgtggccgtg 352
           ||||||||||||||||||||
Sbjct: 642 tgaccgtgaccgtggccgtg 623



to top

>gb|AE003686.4| Drosophila melanogaster chromosome 3R, section 24 of 118 of the complete
              sequence
          Length = 223505

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    cgtggccaaggaggaggagg 332
              ||||||||||||||||||||
Sbjct: 166427 cgtggccaaggaggaggagg 166408



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 333      tgaccgtgaccgtggccgtg 352
                ||||||||||||||||||||
Sbjct: 27227134 tgaccgtgaccgtggccgtg 27227115



to top

>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146585

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 333    tgaccgtgaccgtggccgtg 352
              ||||||||||||||||||||
Sbjct: 114566 tgaccgtgaccgtggccgtg 114547



to top

>gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, complete sequence
          Length = 181443

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 182   tggatatgaagcatgagtttgcat 205
             ||||| ||||||||||||||||||
Sbjct: 74852 tggatctgaagcatgagtttgcat 74829


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,906,872
Number of Sequences: 3902068
Number of extensions: 3906872
Number of successful extensions: 84281
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83497
Number of HSP's gapped (non-prelim): 755
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top