ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13d08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-A08, full insert sequence Length = 1574 Score = 329 bits (166), Expect = 6e-87 Identities = 270/305 (88%), Gaps = 6/305 (1%) Strand = Plus / Plus Query: 185 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgt 244 |||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 216 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacgcgtgggttcacgtcggccgt 275 Query: 245 ggtcggcgagggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagct 304 |||||||||||| ||||||||||||||||||||| ||| ||||||||||| || Sbjct: 276 cgtcggcgagggcggcttcagcaccgtctacctcggccgcgtcgccggctcc------ct 329 Query: 305 cgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagct 364 ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 330 cgcggccgtcaaggtccaccgcagcagcgagcgcctccagcgcgccttccgccaggagct 389 Query: 365 ggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgacca 424 ||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 390 cgacgccctcctccgcgtccgccacccccacatcgtccgcctcctcgcgttctgcgacca 449 Query: 425 gcgcgacgagggcgtgctcgtcctcgagttcgcgcccaacggcagcctccacgaccacct 484 ||| |||||||||||||| || || ||||||||||| ||||| | ||| ||||| || || Sbjct: 450 gcgagacgagggcgtgctggtgctggagttcgcgccgaacgggaacctgcacgaacagct 509 Query: 485 ccacg 489 ||||| Sbjct: 510 ccacg 514 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||| | ||| ||||||||||||||||| Sbjct: 538 ccgtgggcgcggcgggtggcggtggcgctgcaggtggc 575
>dbj|AK071309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085P06, full insert sequence Length = 1610 Score = 329 bits (166), Expect = 6e-87 Identities = 270/305 (88%), Gaps = 6/305 (1%) Strand = Plus / Plus Query: 185 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgt 244 |||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 252 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacgcgtgggttcacgtcggccgt 311 Query: 245 ggtcggcgagggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagct 304 |||||||||||| ||||||||||||||||||||| ||| ||||||||||| || Sbjct: 312 cgtcggcgagggcggcttcagcaccgtctacctcggccgcgtcgccggctcc------ct 365 Query: 305 cgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagct 364 ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 366 cgcggccgtcaaggtccaccgcagcagcgagcgcctccagcgcgccttccgccaggagct 425 Query: 365 ggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgacca 424 ||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 426 cgacgccctcctccgcgtccgccacccccacatcgtccgcctcctcgcgttctgcgacca 485 Query: 425 gcgcgacgagggcgtgctcgtcctcgagttcgcgcccaacggcagcctccacgaccacct 484 ||| |||||||||||||| || || ||||||||||| ||||| | ||| ||||| || || Sbjct: 486 gcgagacgagggcgtgctggtgctggagttcgcgccgaacgggaacctgcacgaacagct 545 Query: 485 ccacg 489 ||||| Sbjct: 546 ccacg 550 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||| | ||| ||||||||||||||||| Sbjct: 574 ccgtgggcgcggcgggtggcggtggcgctgcaggtggc 611
>dbj|AK058286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E01, full insert sequence Length = 1638 Score = 329 bits (166), Expect = 6e-87 Identities = 270/305 (88%), Gaps = 6/305 (1%) Strand = Plus / Plus Query: 185 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgt 244 |||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 218 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacgcgtgggttcacgtcggccgt 277 Query: 245 ggtcggcgagggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagct 304 |||||||||||| ||||||||||||||||||||| ||| ||||||||||| || Sbjct: 278 cgtcggcgagggcggcttcagcaccgtctacctcggccgcgtcgccggctcc------ct 331 Query: 305 cgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagct 364 ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 332 cgcggccgtcaaggtccaccgcagcagcgagcgcctccagcgcgccttccgccaggagct 391 Query: 365 ggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgacca 424 ||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 392 cgacgccctcctccgcgtccgccacccccacatcgtccgcctcctcgcgttctgcgacca 451 Query: 425 gcgcgacgagggcgtgctcgtcctcgagttcgcgcccaacggcagcctccacgaccacct 484 ||| |||||||||||||| || || ||||||||||| ||||| | ||| ||||| || || Sbjct: 452 gcgagacgagggcgtgctggtgctggagttcgcgccgaacgggaacctgcacgaacagct 511 Query: 485 ccacg 489 ||||| Sbjct: 512 ccacg 516 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||| | ||| ||||||||||||||||| Sbjct: 540 ccgtgggcgcggcgggtggcggtggcgctgcaggtggc 577
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 285 bits (144), Expect = 8e-74 Identities = 218/243 (89%), Gaps = 6/243 (2%) Strand = Plus / Minus Query: 185 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgt 244 |||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 712344 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacgcgtgggttcacgtcggccgt 712285 Query: 245 ggtcggcgagggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagct 304 |||||||||||| ||||||||||||||||||||| ||| ||||||||||| || Sbjct: 712284 cgtcggcgagggcggcttcagcaccgtctacctcggccgcgtcgccggctcc------ct 712231 Query: 305 cgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagct 364 ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 712230 cgcggccgtcaaggtccaccgcagcagcgagcgcctccagcgcgccttccgccaggagct 712171 Query: 365 ggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgacca 424 ||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 712170 cgacgccctcctccgcgtccgccacccccacatcgtccgcctcctcgcgttctgcgacca 712111 Query: 425 gcg 427 ||| Sbjct: 712110 gcg 712108 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||| | ||| ||||||||||||||||| Sbjct: 711929 ccgtgggcgcggcgggtggcggtggcgctgcaggtggc 711892 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 384 cgccacccgcacatcgtccgcctcctcgccttctgcg 420 |||||||||||| |||||||||||| || |||||||| Sbjct: 33156079 cgccacccgcacctcgtccgcctccacggcttctgcg 33156115 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 429 gacgagggcgtgctcgtcctcgagttcgcgcccaacggcagcctccacgaccacctccac 488 |||||||||||||| || || ||||||||||| ||||| | ||| ||||| || |||||| Sbjct: 712013 gacgagggcgtgctggtgctggagttcgcgccgaacgggaacctgcacgaacagctccac 711954 Query: 489 g 489 | Sbjct: 711953 g 711953
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 285 bits (144), Expect = 8e-74 Identities = 218/243 (89%), Gaps = 6/243 (2%) Strand = Plus / Minus Query: 185 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgt 244 |||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 712342 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacgcgtgggttcacgtcggccgt 712283 Query: 245 ggtcggcgagggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagct 304 |||||||||||| ||||||||||||||||||||| ||| ||||||||||| || Sbjct: 712282 cgtcggcgagggcggcttcagcaccgtctacctcggccgcgtcgccggctcc------ct 712229 Query: 305 cgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagct 364 ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 712228 cgcggccgtcaaggtccaccgcagcagcgagcgcctccagcgcgccttccgccaggagct 712169 Query: 365 ggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgacca 424 ||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 712168 cgacgccctcctccgcgtccgccacccccacatcgtccgcctcctcgcgttctgcgacca 712109 Query: 425 gcg 427 ||| Sbjct: 712108 gcg 712106 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||| | ||| ||||||||||||||||| Sbjct: 711927 ccgtgggcgcggcgggtggcggtggcgctgcaggtggc 711890 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 384 cgccacccgcacatcgtccgcctcctcgccttctgcg 420 |||||||||||| |||||||||||| || |||||||| Sbjct: 33246589 cgccacccgcacctcgtccgcctccacggcttctgcg 33246625 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 429 gacgagggcgtgctcgtcctcgagttcgcgcccaacggcagcctccacgaccacctccac 488 |||||||||||||| || || ||||||||||| ||||| | ||| ||||| || |||||| Sbjct: 712011 gacgagggcgtgctggtgctggagttcgcgccgaacgggaacctgcacgaacagctccac 711952 Query: 489 g 489 | Sbjct: 711951 g 711951
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 285 bits (144), Expect = 8e-74 Identities = 218/243 (89%), Gaps = 6/243 (2%) Strand = Plus / Minus Query: 185 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgt 244 |||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 7889 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacgcgtgggttcacgtcggccgt 7830 Query: 245 ggtcggcgagggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagct 304 |||||||||||| ||||||||||||||||||||| ||| ||||||||||| || Sbjct: 7829 cgtcggcgagggcggcttcagcaccgtctacctcggccgcgtcgccggctcc------ct 7776 Query: 305 cgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagct 364 ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 7775 cgcggccgtcaaggtccaccgcagcagcgagcgcctccagcgcgccttccgccaggagct 7716 Query: 365 ggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgacca 424 ||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 7715 cgacgccctcctccgcgtccgccacccccacatcgtccgcctcctcgcgttctgcgacca 7656 Query: 425 gcg 427 ||| Sbjct: 7655 gcg 7653 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||| | ||| ||||||||||||||||| Sbjct: 7474 ccgtgggcgcggcgggtggcggtggcgctgcaggtggc 7437 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 429 gacgagggcgtgctcgtcctcgagttcgcgcccaacggcagcctccacgaccacctccac 488 |||||||||||||| || || ||||||||||| ||||| | ||| ||||| || |||||| Sbjct: 7558 gacgagggcgtgctggtgctggagttcgcgccgaacgggaacctgcacgaacagctccac 7499 Query: 489 g 489 | Sbjct: 7498 g 7498
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 285 bits (144), Expect = 8e-74 Identities = 218/243 (89%), Gaps = 6/243 (2%) Strand = Plus / Minus Query: 185 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgt 244 |||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 98225 cgcgaggcagctgtcgtgggcgcaggtggaggccatgacgcgtgggttcacgtcggccgt 98166 Query: 245 ggtcggcgagggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagct 304 |||||||||||| ||||||||||||||||||||| ||| ||||||||||| || Sbjct: 98165 cgtcggcgagggcggcttcagcaccgtctacctcggccgcgtcgccggctcc------ct 98112 Query: 305 cgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagct 364 ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 98111 cgcggccgtcaaggtccaccgcagcagcgagcgcctccagcgcgccttccgccaggagct 98052 Query: 365 ggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgacca 424 ||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 98051 cgacgccctcctccgcgtccgccacccccacatcgtccgcctcctcgcgttctgcgacca 97992 Query: 425 gcg 427 ||| Sbjct: 97991 gcg 97989 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||| | ||| ||||||||||||||||| Sbjct: 97810 ccgtgggcgcggcgggtggcggtggcgctgcaggtggc 97773 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 429 gacgagggcgtgctcgtcctcgagttcgcgcccaacggcagcctccacgaccacctccac 488 |||||||||||||| || || ||||||||||| ||||| | ||| ||||| || |||||| Sbjct: 97894 gacgagggcgtgctggtgctggagttcgcgccgaacgggaacctgcacgaacagctccac 97835 Query: 489 g 489 | Sbjct: 97834 g 97834
>ref|NM_197350.1| Oryza sativa (japonica cultivar-group) putative receptor protein kinase (OSJNBa0076F20.2), mRNA Length = 1706 Score = 234 bits (118), Expect = 2e-58 Identities = 228/265 (86%), Gaps = 6/265 (2%) Strand = Plus / Plus Query: 194 gctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgtggtcggcga 253 |||||||||||||||||||||||| ||||||| || |||||||| || ||||||||||| Sbjct: 281 gctgtcgtgggcgcaggtggaggcgatgacgggcgggttcacgtcggcggtggtcggcga 340 Query: 254 gggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagctcgccgccgt 313 |||| | |||||||| || |||||||| ||| |||||||| | |||||||||||| Sbjct: 341 gggcgggttcagcacggtgtacctcgcccgcgtcgccggcgc------gctcgccgccgt 394 Query: 314 caaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagctggacgcgct 373 |||||| ||||||||||||||||| |||| ||||| |||||||||||||| ||||| || Sbjct: 395 caaggtccaccgcagcagcgagcggctccaccgcgtgttccgccaggagctcgacgctct 454 Query: 374 gctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgaccagcgcgacga 433 |||||||||||||| || ||||||||||||||||||||||||||||| |||| || || Sbjct: 455 cctccgcgtccgccatcctcacatcgtccgcctcctcgccttctgcgagcagcaagagga 514 Query: 434 gggcgtgctcgtcctcgagttcgcg 458 |||||||| || || ||||||||| Sbjct: 515 aggcgtgctggtgctggagttcgcg 539 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||||||| | ||||||||||||||||| Sbjct: 597 ccgtgggcgcggcgcgcgtcggtggcgctgcaggtggc 634
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 226 bits (114), Expect = 6e-56 Identities = 203/233 (87%), Gaps = 6/233 (2%) Strand = Plus / Minus Query: 194 gctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgtggtcggcga 253 |||||||||||||||||||||||| ||||||| || |||||||| || ||||||||||| Sbjct: 9335 gctgtcgtgggcgcaggtggaggcgatgacgggcgggttcacgtcggcggtggtcggcga 9276 Query: 254 gggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagctcgccgccgt 313 |||| | |||||||| || |||||||| ||| |||||||| | |||||||||||| Sbjct: 9275 gggcgggttcagcacggtgtacctcgcccgcgtcgccggcgc------gctcgccgccgt 9222 Query: 314 caaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagctggacgcgct 373 |||||| ||||||||||||||||| |||| ||||| |||||||||||||| ||||| || Sbjct: 9221 caaggtccaccgcagcagcgagcggctccaccgcgtgttccgccaggagctcgacgctct 9162 Query: 374 gctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgaccagc 426 |||||||||||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 9161 cctccgcgtccgccatcctcacatcgtccgcctcctcgccttctgcgagcagc 9109 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||||||| | ||||||||||||||||| Sbjct: 8906 ccgtgggcgcggcgcgcgtcggtggcgctgcaggtggc 8869
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 226 bits (114), Expect = 6e-56 Identities = 203/233 (87%), Gaps = 6/233 (2%) Strand = Plus / Minus Query: 194 gctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgtggtcggcga 253 |||||||||||||||||||||||| ||||||| || |||||||| || ||||||||||| Sbjct: 19381469 gctgtcgtgggcgcaggtggaggcgatgacgggcgggttcacgtcggcggtggtcggcga 19381410 Query: 254 gggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagctcgccgccgt 313 |||| | |||||||| || |||||||| ||| |||||||| | |||||||||||| Sbjct: 19381409 gggcgggttcagcacggtgtacctcgcccgcgtcgccggcgc------gctcgccgccgt 19381356 Query: 314 caaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagctggacgcgct 373 |||||| ||||||||||||||||| |||| ||||| |||||||||||||| ||||| || Sbjct: 19381355 caaggtccaccgcagcagcgagcggctccaccgcgtgttccgccaggagctcgacgctct 19381296 Query: 374 gctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgaccagc 426 |||||||||||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 19381295 cctccgcgtccgccatcctcacatcgtccgcctcctcgccttctgcgagcagc 19381243 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||||||| | ||||||||||||||||| Sbjct: 19381040 ccgtgggcgcggcgcgcgtcggtggcgctgcaggtggc 19381003
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 226 bits (114), Expect = 6e-56 Identities = 203/233 (87%), Gaps = 6/233 (2%) Strand = Plus / Minus Query: 194 gctgtcgtgggcgcaggtggaggccatgacggcgggcttcacgtccgccgtggtcggcga 253 |||||||||||||||||||||||| ||||||| || |||||||| || ||||||||||| Sbjct: 19392745 gctgtcgtgggcgcaggtggaggcgatgacgggcgggttcacgtcggcggtggtcggcga 19392686 Query: 254 gggcagcttcagcaccgtctacctcgcgcgcctcgccggctcctcccagctcgccgccgt 313 |||| | |||||||| || |||||||| ||| |||||||| | |||||||||||| Sbjct: 19392685 gggcgggttcagcacggtgtacctcgcccgcgtcgccggcgc------gctcgccgccgt 19392632 Query: 314 caaggtgcaccgcagcagcgagcgcctccgccgcgccttccgccaggagctggacgcgct 373 |||||| ||||||||||||||||| |||| ||||| |||||||||||||| ||||| || Sbjct: 19392631 caaggtccaccgcagcagcgagcggctccaccgcgtgttccgccaggagctcgacgctct 19392572 Query: 374 gctccgcgtccgccacccgcacatcgtccgcctcctcgccttctgcgaccagc 426 |||||||||||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 19392571 cctccgcgtccgccatcctcacatcgtccgcctcctcgccttctgcgagcagc 19392519 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgcaggtggc 556 |||||||||||||||||| | ||||||||||||||||| Sbjct: 19392316 ccgtgggcgcggcgcgcgtcggtggcgctgcaggtggc 19392279
>ref|XM_467048.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1328 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 293 ctcctcccagctcgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgcctt 352 |||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 269 ctcctcccgcctcggcgccgtcaaggtgcagcgcagcagcgagcgcctccaccgcgcctt 328 Query: 353 ccgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgc 412 | ||||||||| |||| ||| ||| | |||||||||| ||| ||||||||||||||| Sbjct: 329 ctgccaggagcgcgacgtgctcctctccctccgccacccccacgtcgtccgcctcctcgg 388 Query: 413 cttctgcgac 422 || ||||||| Sbjct: 389 ctactgcgac 398
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Minus Query: 293 ctcctcccagctcgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgcctt 352 |||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 26110098 ctcctcccgcctcggcgccgtcaaggtgcagcgcagcagcgagcgcctccaccgcgcctt 26110039 Query: 353 ccgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgc 412 | ||||||||| |||| ||| ||| | |||||||||| ||| ||||||||||||||| Sbjct: 26110038 ctgccaggagcgcgacgtgctcctctccctccgccacccccacgtcgtccgcctcctcgg 26109979 Query: 413 cttctgcgac 422 || ||||||| Sbjct: 26109978 ctactgcgac 26109969 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 345 cgcgccttccgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgc 404 ||||| ||||| |||||||| ||| ||| | |||| |||||||||| ||||||||| | Sbjct: 406171 cgcgcgttccggcaggagctcgacctgctccgccgcctccgccacccccacatcgtctcc 406112 Query: 405 ctcctcgcct 414 |||||||||| Sbjct: 406111 ctcctcgcct 406102
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Minus Query: 293 ctcctcccagctcgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgcctt 352 |||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 6925 ctcctcccgcctcggcgccgtcaaggtgcagcgcagcagcgagcgcctccaccgcgcctt 6866 Query: 353 ccgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgc 412 | ||||||||| |||| ||| ||| | |||||||||| ||| ||||||||||||||| Sbjct: 6865 ctgccaggagcgcgacgtgctcctctccctccgccacccccacgtcgtccgcctcctcgg 6806 Query: 413 cttctgcgac 422 || ||||||| Sbjct: 6805 ctactgcgac 6796
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Minus Query: 293 ctcctcccagctcgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgcctt 352 |||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 117544 ctcctcccgcctcggcgccgtcaaggtgcagcgcagcagcgagcgcctccaccgcgcctt 117485 Query: 353 ccgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgc 412 | ||||||||| |||| ||| ||| | |||||||||| ||| ||||||||||||||| Sbjct: 117484 ctgccaggagcgcgacgtgctcctctccctccgccacccccacgtcgtccgcctcctcgg 117425 Query: 413 cttctgcgac 422 || ||||||| Sbjct: 117424 ctactgcgac 117415
>dbj|AK111267.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-F08, full insert sequence Length = 1328 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 293 ctcctcccagctcgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgcctt 352 |||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 269 ctcctcccgcctcggcgccgtcaaggtgcagcgcagcagcgagcgcctccaccgcgcctt 328 Query: 353 ccgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgc 412 | ||||||||| |||| ||| ||| | |||||||||| ||| ||||||||||||||| Sbjct: 329 ctgccaggagcgcgacgtgctcctctccctccgccacccccacgtcgtccgcctcctcgg 388 Query: 413 cttctgcgac 422 || ||||||| Sbjct: 389 ctactgcgac 398
>ref|XM_473357.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 294 tcctcccagctcgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttc 353 ||||||| |||| |||||||||||| ||| |||||||||||||||| | |||||||||| Sbjct: 262 tcctcccgcctcggcgccgtcaaggtccactgcagcagcgagcgcctgcaccgcgccttc 321 Query: 354 cgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgcc 413 ||||||||||| || | ||| ||| | ||||||||||||||||||||||||| |||| | Sbjct: 322 cgccaggagctcgaggtgctcctctccctccgccacccgcacatcgtccgcctgctcggc 381 Query: 414 ttctgcgac 422 | ||||||| Sbjct: 382 tactgcgac 390
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 294 tcctcccagctcgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttc 353 ||||||| |||| |||||||||||| ||| |||||||||||||||| | |||||||||| Sbjct: 100700 tcctcccgcctcggcgccgtcaaggtccactgcagcagcgagcgcctgcaccgcgccttc 100641 Query: 354 cgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgcc 413 ||||||||||| || | ||| ||| | ||||||||||||||||||||||||| |||| | Sbjct: 100640 cgccaggagctcgaggtgctcctctccctccgccacccgcacatcgtccgcctgctcggc 100581 Query: 414 ttctgcgac 422 | ||||||| Sbjct: 100580 tactgcgac 100572
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 294 tcctcccagctcgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttc 353 ||||||| |||| |||||||||||| ||| |||||||||||||||| | |||||||||| Sbjct: 27032999 tcctcccgcctcggcgccgtcaaggtccactgcagcagcgagcgcctgcaccgcgccttc 27032940 Query: 354 cgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgcc 413 ||||||||||| || | ||| ||| | ||||||||||||||||||||||||| |||| | Sbjct: 27032939 cgccaggagctcgaggtgctcctctccctccgccacccgcacatcgtccgcctgctcggc 27032880 Query: 414 ttctgcgac 422 | ||||||| Sbjct: 27032879 tactgcgac 27032871 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 399 gtccgcctcctcgccttctgcgaccagcgcgacgagggcgtgctcgtcctcgagttcgcg 458 ||||||||||||| |||||||| | | ||| |||| || | |||||| ||||||| | Sbjct: 21888383 gtccgcctcctcggcttctgcgccgacggcggcgagcgcatcctcgtctacgagttcatg 21888324 Query: 459 cccaacggcagcctccacgaccacctccac 488 |||||||||| ||||||||||||||||||| Sbjct: 21888323 cccaacggcaccctccacgaccacctccac 21888294
>dbj|AK066397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061M19, full insert sequence Length = 1494 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 294 tcctcccagctcgccgccgtcaaggtgcaccgcagcagcgagcgcctccgccgcgccttc 353 ||||||| |||| |||||||||||| ||| |||||||||||||||| | |||||||||| Sbjct: 408 tcctcccgcctcggcgccgtcaaggtccactgcagcagcgagcgcctgcaccgcgccttc 467 Query: 354 cgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgcctcctcgcc 413 ||||||||||| || | ||| ||| | ||||||||||||||||||||||||| |||| | Sbjct: 468 cgccaggagctcgaggtgctcctctccctccgccacccgcacatcgtccgcctgctcggc 527 Query: 414 ttctgcgac 422 | ||||||| Sbjct: 528 tactgcgac 536
>ref|XM_472608.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 399 gtccgcctcctcgccttctgcgaccagcgcgacgagggcgtgctcgtcctcgagttcgcg 458 ||||||||||||| |||||||| | | ||| |||| || | |||||| ||||||| | Sbjct: 1648 gtccgcctcctcggcttctgcgccgacggcggcgagcgcatcctcgtctacgagttcatg 1707 Query: 459 cccaacggcagcctccacgaccacctccac 488 |||||||||| ||||||||||||||||||| Sbjct: 1708 cccaacggcaccctccacgaccacctccac 1737
>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01, complete sequence Length = 127713 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 399 gtccgcctcctcgccttctgcgaccagcgcgacgagggcgtgctcgtcctcgagttcgcg 458 ||||||||||||| |||||||| | | ||| |||| || | |||||| ||||||| | Sbjct: 72984 gtccgcctcctcggcttctgcgccgacggcggcgagcgcatcctcgtctacgagttcatg 72925 Query: 459 cccaacggcagcctccacgaccacctccac 488 |||||||||| ||||||||||||||||||| Sbjct: 72924 cccaacggcaccctccacgaccacctccac 72895
>dbj|AK109788.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D03, full insert sequence Length = 2846 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 399 gtccgcctcctcgccttctgcgaccagcgcgacgagggcgtgctcgtcctcgagttcgcg 458 ||||||||||||| |||||||| | | ||| |||| || | |||||| ||||||| | Sbjct: 1745 gtccgcctcctcggcttctgcgccgacggcggcgagcgcatcctcgtctacgagttcatg 1804 Query: 459 cccaacggcagcctccacgaccacctccac 488 |||||||||| ||||||||||||||||||| Sbjct: 1805 cccaacggcaccctccacgaccacctccac 1834
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 382 tccgccacccgcacatcgtccgcctcctcgccttctgc 419 ||||||||| | |||||||||||||||||||||||||| Sbjct: 154129 tccgccaccggaacatcgtccgcctcctcgccttctgc 154166
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 382 tccgccacccgcacatcgtccgcctcctcgccttctgc 419 ||||||||| | |||||||||||||||||||||||||| Sbjct: 7028871 tccgccaccggaacatcgtccgcctcctcgccttctgc 7028908 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 441 ctcgtcctcgagttcgcgcccaacggcagcctc 473 ||||||||||| ||| |||||||||||||||| Sbjct: 360059 ctcgtcctcgacttcatgcccaacggcagcctc 360091 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cgtctacctcgcgcgcctcg 288 |||||||||||||||||||| Sbjct: 19922513 cgtctacctcgcgcgcctcg 19922494 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 462 aacggcagcctccacgaccacctccacg 489 ||||||| |||||||||||| ||||||| Sbjct: 6305845 aacggcaccctccacgaccagctccacg 6305818
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 382 tccgccacccgcacatcgtccgcctcctcgccttctgc 419 ||||||||| | |||||||||||||||||||||||||| Sbjct: 7095338 tccgccaccggaacatcgtccgcctcctcgccttctgc 7095375 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 441 ctcgtcctcgagttcgcgcccaacggcagcctc 473 ||||||||||| ||| |||||||||||||||| Sbjct: 360059 ctcgtcctcgacttcatgcccaacggcagcctc 360091 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cgtctacctcgcgcgcctcg 288 |||||||||||||||||||| Sbjct: 20207492 cgtctacctcgcgcgcctcg 20207473 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 462 aacggcagcctccacgaccacctccacg 489 ||||||| |||||||||||| ||||||| Sbjct: 6372312 aacggcaccctccacgaccagctccacg 6372285
>ref|XM_968050.1| PREDICTED: Tribolium castaneum similar to 3-phosphoinositide-dependent protein kinase 1 (hPDK1) (LOC661920), mRNA Length = 1702 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 247 tcggcgagggcagcttcagcaccgtctacctcgc 280 |||| ||||||||||||||||| ||||||||||| Sbjct: 342 tcggggagggcagcttcagcacggtctacctcgc 375
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 345 cgcgccttccgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgc 404 ||||| ||||| |||||||| ||| ||| | |||| |||||||||| ||||||||| | Sbjct: 134955 cgcgcgttccggcaggagctcgacctgctccgccgcctccgccacccccacatcgtctcc 134896 Query: 405 ctcctcgcct 414 |||||||||| Sbjct: 134895 ctcctcgcct 134886
>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017C12 Length = 135356 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 345 cgcgccttccgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgc 404 ||||| ||||| |||||||| ||| ||| | |||| |||||||||| ||||||||| | Sbjct: 2412 cgcgcgttccggcaggagctcgacctgctccgccgcctccgccacccccacatcgtctcc 2353 Query: 405 ctcctcgcct 414 |||||||||| Sbjct: 2352 ctcctcgcct 2343
>dbj|AK099892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113C03, full insert sequence Length = 1492 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 345 cgcgccttccgccaggagctggacgcgctgctccgcgtccgccacccgcacatcgtccgc 404 ||||| ||||| |||||||| ||| ||| | |||| |||||||||| ||||||||| | Sbjct: 505 cgcgcgttccggcaggagctcgacctgctccgccgcctccgccacccccacatcgtctcc 564 Query: 405 ctcctcgcct 414 |||||||||| Sbjct: 565 ctcctcgcct 574
>ref|XM_469978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1308 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 384 cgccacccgcacatcgtccgcctcctcgccttctgcg 420 |||||||||||| |||||||||||| || |||||||| Sbjct: 547 cgccacccgcacctcgtccgcctccacggcttctgcg 583
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 384 cgccacccgcacatcgtccgcctcctcgccttctgcg 420 |||||||||||| |||||||||||| || |||||||| Sbjct: 88476 cgccacccgcacctcgtccgcctccacggcttctgcg 88440
>ref|NM_188346.1| Oryza sativa (japonica cultivar-group), Ozsa8097 predicted mRNA Length = 1434 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 378 cgcgtccgccacccgcacatcgt 400 ||||||||||||||||||||||| Sbjct: 226 cgcgtccgccacccgcacatcgt 248
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 378 cgcgtccgccacccgcacatcgt 400 ||||||||||||||||||||||| Sbjct: 5798841 cgcgtccgccacccgcacatcgt 5798863
>gb|AF204400.1|AF204400 Myxococcus xanthus FrgA (frgA), FrgB (frgB), and FrgC (frgC) genes, complete cds Length = 6461 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 511 ctcctcttccgtgggcgcggcgcgcggccgtggcg 545 |||||||||||||| ||||||| ||||| |||||| Sbjct: 638 ctcctcttccgtggccgcggcgggcggcggtggcg 604
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 378 cgcgtccgccacccgcacatcgt 400 ||||||||||||||||||||||| Sbjct: 2582 cgcgtccgccacccgcacatcgt 2604
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 378 cgcgtccgccacccgcacatcgt 400 ||||||||||||||||||||||| Sbjct: 123543 cgcgtccgccacccgcacatcgt 123565
>ref|XM_790081.1| PREDICTED: Strongylocentrotus purpuratus similar to Mitogen-activated protein kinase kinase kinase 1 (MAPK/ERK kinase kinase 1) (MEK kinase 1) (MEKK 1) (LOC590478), mRNA Length = 3477 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 ccacccgcacatcgtccgcctc 407 |||||||||||||||||||||| Sbjct: 2841 ccacccgcacatcgtccgcctc 2862
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 425 gcgcgacgagggcgtgctcgtcctcg 450 |||||||||||||||||||| ||||| Sbjct: 81713 gcgcgacgagggcgtgctcgacctcg 81738
>emb|AL935055.8| Mouse DNA sequence from clone RP23-131J21 on chromosome 2, complete sequence Length = 210691 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 494 caaggcctctgtttctcctcctcttc 519 ||||||||||||||||| |||||||| Sbjct: 77327 caaggcctctgtttctcatcctcttc 77352
>ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3262 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 458 gcccaacggcagcctccacgaccacctccacgccagcaagg 498 |||||||||||||||| ||||| |||||||| | |||||| Sbjct: 2343 gcccaacggcagcctcggcgacctcctccacggcggcaagg 2383
>ref|XM_479825.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2841 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 527 gcggcgcgcggccgtggcgctgcaggtgg 555 ||||||||||||||||||| || |||||| Sbjct: 67 gcggcgcgcggccgtggcggtggaggtgg 95
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 gggcgcaggtggaggccatgacggc 226 |||| |||||||||||||||||||| Sbjct: 137851 gggcacaggtggaggccatgacggc 137875
>ref|XM_854075.1| PREDICTED: Canis familiaris similar to metallothionein-like 5, testis-specific (tesmin) (predicted), transcript variant 2 (LOC478454), mRNA Length = 1926 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 gcggcaccggcggcgtcgccacccg 136 |||||| |||||||||||||||||| Sbjct: 100 gcggcagcggcggcgtcgccacccg 124
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 161 gcagcagcccggcaaggtcggcggc 185 ||||||||||||| ||||||||||| Sbjct: 234477 gcagcagcccggccaggtcggcggc 234453
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 ctcctcttccgtgggcgcggc 531 ||||||||||||||||||||| Sbjct: 5036726 ctcctcttccgtgggcgcggc 5036746
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 tcggcgagggcagcttcagcaccgtctac 275 ||||||||||| ||||| ||||||||||| Sbjct: 20552090 tcggcgagggcggcttcggcaccgtctac 20552062
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 458 gcccaacggcagcctccacgaccacctccacgccagcaagg 498 |||||||||||||||| ||||| |||||||| | |||||| Sbjct: 17644304 gcccaacggcagcctcggcgacctcctccacggcggcaagg 17644264 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 527 gcggcgcgcggccgtggcgctgcaggtgg 555 ||||||||||||||||||| || |||||| Sbjct: 1105035 gcggcgcgcggccgtggcggtggaggtgg 1105063 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 458 gcccaacggcagcctccacgaccacctccacg 489 |||||||||||||||| |||| | |||||||| Sbjct: 2767113 gcccaacggcagcctcgacgagctcctccacg 2767144
>gb|AC019252.10| Homo sapiens chromosome 8, clone RP11-390M9, complete sequence Length = 137135 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 ctctgtttctcctcctcttcc 520 ||||||||||||||||||||| Sbjct: 107684 ctctgtttctcctcctcttcc 107664
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 527 gcggcgcgcggccgtggcgctgcaggtgg 555 ||||||||||||||||||| || |||||| Sbjct: 18272 gcggcgcgcggccgtggcggtggaggtgg 18300
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1254_E07 Length = 124028 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 tcggcgagggcagcttcagcaccgtctac 275 ||||||||||| ||||| ||||||||||| Sbjct: 69737 tcggcgagggcggcttcggcaccgtctac 69709
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 tcggcgagggcagcttcagcaccgtctac 275 ||||||||||| ||||| ||||||||||| Sbjct: 17748 tcggcgagggcggcttcggcaccgtctac 17720
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 ctccacgaccacctccacgcc 491 ||||||||||||||||||||| Sbjct: 1116200 ctccacgaccacctccacgcc 1116180
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 527 gcggcgcgcggccgtggcgctgcaggtgg 555 ||||||||||||||||||| || |||||| Sbjct: 133562 gcggcgcgcggccgtggcggtggaggtgg 133590
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 458 gcccaacggcagcctccacgaccacctccacgccagcaagg 498 |||||||||||||||| ||||| |||||||| | |||||| Sbjct: 120954 gcccaacggcagcctcggcgacctcctccacggcggcaagg 120914
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 458 gcccaacggcagcctccacgaccacctccacgccagcaagg 498 |||||||||||||||| ||||| |||||||| | |||||| Sbjct: 29693 gcccaacggcagcctcggcgacctcctccacggcggcaagg 29653
>dbj|AK109643.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-G09, full insert sequence Length = 1938 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 441 ctcgtcctcgagttcgcgcccaacggcagcctc 473 ||||||||||| ||| |||||||||||||||| Sbjct: 1746 ctcgtcctcgacttcatgcccaacggcagcctc 1778
>dbj|AK105326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A02, full insert sequence Length = 858 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 527 gcggcgcgcggccgtggcgctgcaggtgg 555 ||||||||||||||||||| || |||||| Sbjct: 344 gcggcgcgcggccgtggcggtggaggtgg 372
>dbj|AK103562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132K03, full insert sequence Length = 2839 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 527 gcggcgcgcggccgtggcgctgcaggtgg 555 ||||||||||||||||||| || |||||| Sbjct: 67 gcggcgcgcggccgtggcggtggaggtgg 95
>dbj|AK073061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021A01, full insert sequence Length = 2391 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 441 ctcgtcctcgagttcgcgcccaacggcagcctc 473 ||||||||||| ||| |||||||||||||||| Sbjct: 1427 ctcgtcctcgacttcatgcccaacggcagcctc 1459
>dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050N03, full insert sequence Length = 3262 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 458 gcccaacggcagcctccacgaccacctccacgccagcaagg 498 |||||||||||||||| ||||| |||||||| | |||||| Sbjct: 2343 gcccaacggcagcctcggcgacctcctccacggcggcaagg 2383
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 cggcaccggcggcgtcgccacccga 137 |||||||||||||| |||||||||| Sbjct: 467972 cggcaccggcggcgacgccacccga 467948
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 441 ctcgtcctcgagttcgcgcccaacggcagcctc 473 ||||||||||| ||| |||||||||||||||| Sbjct: 67377 ctcgtcctcgacttcatgcccaacggcagcctc 67409
>gb|U11693.1|ASU11693 Avena sativa victorin binding protein mRNA, complete cds Length = 3408 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 cgcaggtggaggccatgacgg 225 ||||||||||||||||||||| Sbjct: 341 cgcaggtggaggccatgacgg 321
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ccggcaaggtcggcggcgcg 188 |||||||||||||||||||| Sbjct: 41016 ccggcaaggtcggcggcgcg 41035
>gb|AC165224.9| Mus musculus chromosome 5, clone RP24-389L10, complete sequence Length = 155046 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tctgtttctcctcctcttcc 520 |||||||||||||||||||| Sbjct: 66368 tctgtttctcctcctcttcc 66349
>ref|XM_550648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1867 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 cacatcgtccgcctcctcgccttctgcg 420 ||||||||||||||||| | |||||||| Sbjct: 827 cacatcgtccgcctccttggcttctgcg 854
>ref|XM_510189.1| PREDICTED: Pan troglodytes X-ray repair cross complementing protein 3 (LOC453191), mRNA Length = 1337 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 581 gctggacgcgctgctccgcg 600
>ref|XM_480099.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2274 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 458 gcccaacggcagcctccacgaccacctccacg 489 |||||||||||||||| |||| | |||||||| Sbjct: 1979 gcccaacggcagcctcgacgagctcctccacg 2010
>ref|NM_001031233.1| Gallus gallus tripartite motif-containing 8 (TRIM8), mRNA Length = 2443 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cccgcacatcgtccgcctcc 408 |||||||||||||||||||| Sbjct: 552 cccgcacatcgtccgcctcc 533
>gb|BC103771.1| Mus musculus RIKEN cDNA 7420416P09 gene, mRNA (cDNA clone MGC:117755 IMAGE:30935479), complete cds Length = 3054 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ggagatgctgctgcacaggc 84 |||||||||||||||||||| Sbjct: 380 ggagatgctgctgcacaggc 399
>gb|BC001036.1| Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 3, mRNA (cDNA clone MGC:1435 IMAGE:3139703), complete cds Length = 2593 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 616 gctggacgcgctgctccgcg 635
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ccgtgggcgcggcgcgcggc 538 |||||||||||||||||||| Sbjct: 1197127 ccgtgggcgcggcgcgcggc 1197108
>gb|AC138741.7| Mus musculus chromosome 1, clone RP24-260D21, complete sequence Length = 161846 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 479 ccacctccacgccagcaaggcctctgtt 506 |||||||||| ||||||||||| ||||| Sbjct: 75613 ccacctccacaccagcaaggccgctgtt 75586
>ref|XM_364350.1| Magnaporthe grisea 70-15 hypothetical protein (MG09195.4) partial mRNA Length = 966 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 cctccacgaccacctccacg 489 |||||||||||||||||||| Sbjct: 146 cctccacgaccacctccacg 127
>ref|XM_323780.1| Neurospora crassa OR74A hypothetical protein (NCU04428.1) partial mRNA Length = 2478 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 cctcccagctcgccgccgtcaagg 318 |||||||||||||||||| ||||| Sbjct: 1817 cctcccagctcgccgccgccaagg 1840
>ref|XM_952412.1| Neurospora crassa OR74A hypothetical protein (NCU04428.1) partial mRNA Length = 2478 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 cctcccagctcgccgccgtcaagg 318 |||||||||||||||||| ||||| Sbjct: 1817 cctcccagctcgccgccgccaagg 1840
>ref|NM_001033776.1| Mus musculus RIKEN cDNA 7420416P09 gene (7420416P09Rik), mRNA Length = 3054 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ggagatgctgctgcacaggc 84 |||||||||||||||||||| Sbjct: 380 ggagatgctgctgcacaggc 399
>gb|AY518936.1| Toxoplasma gondii eukaryotic initiation factor-2 alpha kinase-A mRNA, complete cds Length = 15219 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cgcgcctcgccggctcctcc 299 |||||||||||||||||||| Sbjct: 6832 cgcgcctcgccggctcctcc 6813
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ccgtgggcgcggcgcgcggc 538 |||||||||||||||||||| Sbjct: 2318958 ccgtgggcgcggcgcgcggc 2318977
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 tcaaggtgcaccgcagcagcgagc 336 |||||||||||| ||||||||||| Sbjct: 210533 tcaaggtgcaccacagcagcgagc 210510
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cgtctacctcgcgcgcctcg 288 |||||||||||||||||||| Sbjct: 99580 cgtctacctcgcgcgcctcg 99561
>gb|AC159641.2| Mus musculus BAC clone RP23-465F1 from chromosome 12, complete sequence Length = 176949 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ggagatgctgctgcacaggc 84 |||||||||||||||||||| Sbjct: 97873 ggagatgctgctgcacaggc 97854
>gb|AC153919.8| Mus musculus 10 BAC RP23-91E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 264561 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gaggccggagatgctgctgcacag 82 |||||| ||||||||||||||||| Sbjct: 115736 gaggcctgagatgctgctgcacag 115713
>ref|XM_545737.1| PREDICTED: Canis familiaris similar to olfactory receptor 433 (LOC488620), mRNA Length = 945 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgagggcagcttcagcaccg 270 |||||||||||||||||||| Sbjct: 687 cgagggcagcttcagcaccg 668
>ref|XM_545738.2| PREDICTED: Canis familiaris similar to olfactory receptor 433 (LOC488621), mRNA Length = 1302 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgagggcagcttcagcaccg 270 |||||||||||||||||||| Sbjct: 1044 cgagggcagcttcagcaccg 1025
>emb|CR954257.1| Anopheles gambiae Pen-1 region; BAC clone 32F02 from library NotreDame1 of Anopheles gambiae (African malaria mosquito) strain PEST Length = 137277 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cagcagcagcccggcaaggt 178 |||||||||||||||||||| Sbjct: 134888 cagcagcagcccggcaaggt 134869
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 gctcgtcctcgagttcgcgc 459 |||||||||||||||||||| Sbjct: 59167 gctcgtcctcgagttcgcgc 59148
>gb|AC123809.3| Mus musculus BAC clone RP24-174M12 from chromosome 10, complete sequence Length = 157123 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 tctgtttctcctcctcttcc 520 |||||||||||||||||||| Sbjct: 31663 tctgtttctcctcctcttcc 31682
>gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, complete sequence Length = 221920 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 tttctcctcctcttccgtgg 524 |||||||||||||||||||| Sbjct: 93437 tttctcctcctcttccgtgg 93456
>emb|CR700683.2|CNS0G3LJ Tetraodon nigroviridis full-length cDNA Length = 607 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 caggagctggacgcgctgct 376 |||||||||||||||||||| Sbjct: 27 caggagctggacgcgctgct 46
>emb|CR699592.2|CNS0G2R8 Tetraodon nigroviridis full-length cDNA Length = 1240 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 caggagctggacgcgctgct 376 |||||||||||||||||||| Sbjct: 711 caggagctggacgcgctgct 730
>emb|CR696407.2|CNS0G0AR Tetraodon nigroviridis full-length cDNA Length = 1287 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 caggagctggacgcgctgct 376 |||||||||||||||||||| Sbjct: 715 caggagctggacgcgctgct 734
>emb|CR684774.2|CNS0FRBM Tetraodon nigroviridis full-length cDNA Length = 1350 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 caggagctggacgcgctgct 376 |||||||||||||||||||| Sbjct: 775 caggagctggacgcgctgct 794
>gb|AC159474.9| Mus musculus 10 BAC RP23-28P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230201 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gaggccggagatgctgctgcacag 82 |||||| ||||||||||||||||| Sbjct: 34884 gaggcctgagatgctgctgcacag 34861
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ccggcaaggtcggcggcgcg 188 |||||||||||||||||||| Sbjct: 76666 ccggcaaggtcggcggcgcg 76647
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 462 aacggcagcctccacgaccacctccacg 489 ||||||| |||||||||||| ||||||| Sbjct: 89123 aacggcaccctccacgaccagctccacg 89096
>emb|AL031717.11|HS361A3 Human DNA sequence from clone LA16c-361A3 on chromosome 16 Contains part of gene simliar to murine JNK/SAPK-associated protein-1, STSs, GSSs and CpG islands, complete sequence Length = 43288 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 accagcagcagcccggcaag 176 |||||||||||||||||||| Sbjct: 6513 accagcagcagcccggcaag 6494
>gb|BT009182.1| Triticum aestivum clone wl1n.pk0124.e2:fis, full insert mRNA sequence Length = 1340 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 acatcgtccgcctcctcgcc 413 |||||||||||||||||||| Sbjct: 320 acatcgtccgcctcctcgcc 339
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 tccgccacccgcacatcgtc 401 |||||||||||||||||||| Sbjct: 1157229 tccgccacccgcacatcgtc 1157248
>gb|AE008710.1| Salmonella typhimurium LT2, section 18 of 220 of the complete genome Length = 20047 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 tttctcctcctcttccgtgggcgc 528 |||||||||| ||||||||||||| Sbjct: 10539 tttctcctccgcttccgtgggcgc 10562
>emb|BX908808.1| Neurospora crassa DNA linkage group IV Cosmid contig G21B4 Length = 177225 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 cctcccagctcgccgccgtcaagg 318 |||||||||||||||||| ||||| Sbjct: 115570 cctcccagctcgccgccgccaagg 115593
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ccgtgggcgcggcgcgcggc 538 |||||||||||||||||||| Sbjct: 2066133 ccgtgggcgcggcgcgcggc 2066114
>emb|AL627266.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 2/20 Length = 268050 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 tttctcctcctcttccgtgggcgc 528 |||||||||| ||||||||||||| Sbjct: 128114 tttctcctccgcttccgtgggcgc 128137
>gb|BT007697.1| Synthetic construct Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 3 mRNA, partial cds Length = 1041 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 264 gctggacgcgctgctccgcg 283
>gb|BT007417.1| Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 3 mRNA, complete cds Length = 1041 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 264 gctggacgcgctgctccgcg 283
>emb|AJ719866.1| Gallus gallus mRNA for hypothetical protein, clone 7g13 Length = 2443 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cccgcacatcgtccgcctcc 408 |||||||||||||||||||| Sbjct: 552 cccgcacatcgtccgcctcc 533
>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence Length = 222520 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 tttctcctcctcttccgtgg 524 |||||||||||||||||||| Sbjct: 85910 tttctcctcctcttccgtgg 85929
>gb|AE006639.1| Homo sapiens 16p13.3 sequence section 7 of 8 Length = 270150 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 accagcagcagcccggcaag 176 |||||||||||||||||||| Sbjct: 120332 accagcagcagcccggcaag 120313
>dbj|AK126706.1| Homo sapiens cDNA FLJ44752 fis, clone BRACE3030057, highly similar to Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 3 (XRCC3) Length = 3670 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 1713 gctggacgcgctgctccgcg 1732
>dbj|AK124498.1| Homo sapiens cDNA FLJ42507 fis, clone BRACE2040514, highly similar to Homo sapiens X-ray repair cross-complementing protein 3 (XRCC3) mRNA Length = 3018 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 1061 gctggacgcgctgctccgcg 1080
>emb|CR622268.1| full-length cDNA clone CS0DC027YM22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2512 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 583 gctggacgcgctgctccgcg 602
>emb|CR613005.1| full-length cDNA clone CS0DI070YP11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2439 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 558 gctggacgcgctgctccgcg 577
>emb|CR610241.1| full-length cDNA clone CS0DC013YC22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2549 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 591 gctggacgcgctgctccgcg 610
>emb|CR605233.1| full-length cDNA clone CS0DG006YD18 of B cells (Ramos cell line) of Homo sapiens (human) Length = 2514 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 593 gctggacgcgctgctccgcg 612
>emb|CR603680.1| full-length cDNA clone CS0DC016YO20 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2450 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 526 gctggacgcgctgctccgcg 545
>dbj|AK023646.1| Homo sapiens cDNA FLJ13584 fis, clone PLACE1009113, highly similar to Homo sapiens X-ray repair cross-complementing protein 3 (XRCC3) mRNA Length = 2574 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 617 gctggacgcgctgctccgcg 636
>dbj|AK022829.1| Homo sapiens cDNA FLJ12767 fis, clone NT2RP2001536, highly similar to Homo sapiens X-ray repair cross-complementing protein 3 (XRCC3) mRNA Length = 2539 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 573 gctggacgcgctgctccgcg 592
>gb|AF508041.1| Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 3 (XRCC3) gene, complete cds Length = 21670 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 10354 gctggacgcgctgctccgcg 10373
>gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, complete sequence Length = 157442 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gctcctcccagctcgccgcc 311 |||||||||||||||||||| Sbjct: 55092 gctcctcccagctcgccgcc 55111
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cccgcacatcgtccgcctcc 408 |||||||||||||||||||| Sbjct: 1068542 cccgcacatcgtccgcctcc 1068523
>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222553 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tctgtttctcctcctcttcc 520 |||||||||||||||||||| Sbjct: 11512 tctgtttctcctcctcttcc 11493
>gb|AC150899.3| Mus musculus BAC clone RP23-179F8 from chromosome 10, complete sequence Length = 202346 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 tttctcctcctcttccgtgg 524 |||||||||||||||||||| Sbjct: 139854 tttctcctcctcttccgtgg 139873
>gb|AF035586.1| Homo sapiens X-ray repair cross-complementing protein 3 (XRCC3) mRNA, complete cds Length = 2570 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 572 gctggacgcgctgctccgcg 591
>gb|AF037222.1| Human DNA from chromosome 14-specific cosmid containing XRCC3 DNA repair gene, genomic sequence, complete sequence Length = 36628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 10338 gctggacgcgctgctccgcg 10357
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 cgcgcctcgccggctcctcc 299 |||||||||||||||||||| Sbjct: 29756734 cgcgcctcgccggctcctcc 29756753 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 tccgccacccgcacatcgtccgcctcctcgccttct 417 ||||||||||| ||||| ||||||||| || ||||| Sbjct: 25563999 tccgccacccgaacatcctccgcctccgcggcttct 25563964 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 393 cacatcgtccgcctcctcgccttctgcg 420 ||||||||||||||||| | |||||||| Sbjct: 2661351 cacatcgtccgcctccttggcttctgcg 2661324
>gb|AC078988.18| Homo sapiens X BAC RP11-169J21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169849 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tctgtttctcctcctcttcc 520 |||||||||||||||||||| Sbjct: 17257 tctgtttctcctcctcttcc 17238
>ref|NM_005432.2| Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 3 (XRCC3), mRNA Length = 2615 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 617 gctggacgcgctgctccgcg 636
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 acctcgcgcgcctcgccggc 293 |||||||||||||||||||| Sbjct: 4474519 acctcgcgcgcctcgccggc 4474500
>ref|XM_230849.3| PREDICTED: Rattus norvegicus similar to KIAA0681 protein (predicted) (LOC311613), mRNA Length = 3204 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 ggccgtggcgctgcaggtgg 555 |||||||||||||||||||| Sbjct: 144 ggccgtggcgctgcaggtgg 163
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 393 cacatcgtccgcctcctcgccttctgcg 420 ||||||||||||||||| | |||||||| Sbjct: 116692 cacatcgtccgcctccttggcttctgcg 116665
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 393 cacatcgtccgcctcctcgccttctgcg 420 ||||||||||||||||| | |||||||| Sbjct: 73098 cacatcgtccgcctccttggcttctgcg 73071
>dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_F03 Length = 110783 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 cgcgcctcgccggctcctcc 299 |||||||||||||||||||| Sbjct: 54864 cgcgcctcgccggctcctcc 54883
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 382 tccgccacccgcacatcgtccgcctcctcgccttct 417 ||||||||||| ||||| ||||||||| || ||||| Sbjct: 82316 tccgccacccgaacatcctccgcctccgcggcttct 82281
>dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015A04 Length = 152058 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 458 gcccaacggcagcctccacgaccacctccacg 489 |||||||||||||||| |||| | |||||||| Sbjct: 30262 gcccaacggcagcctcgacgagctcctccacg 30293
>gb|AY891812.1| Synthetic construct Homo sapiens clone FLH110864.01L X-ray repair complementing defective repair in Chinese hamster cells 3 (XRCC3) mRNA, partial cds Length = 1041 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 264 gctggacgcgctgctccgcg 283
>gb|AY891811.1| Synthetic construct Homo sapiens clone FLH110863.01L X-ray repair complementing defective repair in Chinese hamster cells 3 (XRCC3) mRNA, partial cds Length = 1041 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 264 gctggacgcgctgctccgcg 283
>gb|AY889325.1| Synthetic construct Homo sapiens clone FLH110868.01X X-ray repair complementing defective repair in Chinese hamster cells 3 (XRCC3) mRNA, complete cds Length = 1041 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 264 gctggacgcgctgctccgcg 283
>gb|AY889324.1| Synthetic construct Homo sapiens clone FLH110867.01X X-ray repair complementing defective repair in Chinese hamster cells 3 (XRCC3) mRNA, complete cds Length = 1041 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 264 gctggacgcgctgctccgcg 283
>gb|AE004990.1| Halobacterium sp. NRC-1 section 21 of 170 of the complete genome Length = 12326 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 cgcgcggccgtggcgctgca 550 |||||||||||||||||||| Sbjct: 1455 cgcgcggccgtggcgctgca 1436
>dbj|AK109679.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C06, full insert sequence Length = 1950 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 393 cacatcgtccgcctcctcgccttctgcg 420 ||||||||||||||||| | |||||||| Sbjct: 843 cacatcgtccgcctccttggcttctgcg 816
>dbj|AK106925.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B09, full insert sequence Length = 1867 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 393 cacatcgtccgcctcctcgccttctgcg 420 ||||||||||||||||| | |||||||| Sbjct: 827 cacatcgtccgcctccttggcttctgcg 854
>dbj|AK105581.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E05, full insert sequence Length = 1568 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 458 gcccaacggcagcctccacgaccacctccacg 489 |||||||||||||||| |||| | |||||||| Sbjct: 808 gcccaacggcagcctcgacgagctcctccacg 839
>gb|BC011725.2| Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 3, mRNA (cDNA clone MGC:19630 IMAGE:4138588), complete cds Length = 2520 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 547 gctggacgcgctgctccgcg 566
>gb|AY106440.1| Zea mays PCO134290 mRNA sequence Length = 1542 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 acatcgtccgcctcctcgcc 413 |||||||||||||||||||| Sbjct: 549 acatcgtccgcctcctcgcc 568
>gb|AY729856.1| Isochrysis galbana heat shock protein 90 gene, partial cds Length = 1728 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 tggaggccatgacggcgggc 230 |||||||||||||||||||| Sbjct: 266 tggaggccatgacggcgggc 285
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 505 tttctcctcctcttccgtgggcgc 528 |||||||||| ||||||||||||| Sbjct: 2601999 tttctcctccgcttccgtgggcgc 2601976
>emb|AL139022.4|CNS01DX4 Human chromosome 14 DNA sequence BAC R-840I19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 190517 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 aggcctctgtttctcctcct 515 |||||||||||||||||||| Sbjct: 140205 aggcctctgtttctcctcct 140224
>emb|AL049840.8|CNS0000K Human chromosome 14 DNA sequence BAC R-73M18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165617 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 139660 gctggacgcgctgctccgcg 139679
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gggcgcggcgcgcggccgtg 542 |||||||||||||||||||| Sbjct: 1578100 gggcgcggcgcgcggccgtg 1578081
>gb|AC003106.1|AC003106 Homo sapiens Xp22 GS-524I1 (Genome Systems Human BAC library), complete sequence Length = 128888 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 tctgtttctcctcctcttcc 520 |||||||||||||||||||| Sbjct: 114207 tctgtttctcctcctcttcc 114226
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cagcagcccggcaaggtcgg 181 |||||||||||||||||||| Sbjct: 910540 cagcagcccggcaaggtcgg 910559
>gb|AY364601.1| Ralstonia sp. M1 hypothetical transmembrane protein, lipase, and lipase chaperone genes, complete cds; and hypothetical glutaminyl tRNA synthetase gene, partial cds Length = 4772 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ccgacgaggaccagcagcagcccg 171 ||||||||| |||||||||||||| Sbjct: 597 ccgacgaggcccagcagcagcccg 574
>emb|BX161398.1|CNSLT1IAF human full-length cDNA clone CS0DC014YE11 of Neuroblastoma of Homo sapiens (human) Length = 2483 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gctggacgcgctgctccgcg 381 |||||||||||||||||||| Sbjct: 556 gctggacgcgctgctccgcg 575
>dbj|D89822.1| Streptomyces sp. xyoA gene for xylitol oxidase, complete cds Length = 2794 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 519 ccgtgggcgcggcgcgcggccgtggcgctgca 550 ||||||||||||| ||| ||||||||||||| Sbjct: 2034 ccgtgggcgcggccggcgaccgtggcgctgca 2065 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,757,223 Number of Sequences: 3902068 Number of extensions: 4757223 Number of successful extensions: 131303 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125003 Number of HSP's gapped (non-prelim): 6296 length of query: 556 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 533 effective length of database: 17,143,297,704 effective search space: 9137377676232 effective search space used: 9137377676232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
