ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart13d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466202.1| Oryza sativa (japonica cultivar-group), mRNA 430 e-117
2dbj|AK108057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
4dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
5dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
6gb|AY107498.1| Zea mays PCO134240 mRNA sequence 56 1e-04
7gb|AY108538.1| Zea mays PCO063014 mRNA sequence 52 0.002
8dbj|AK105408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
9dbj|AK103057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
10gb|BC061112.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B, m... 44 0.47
11gb|BC049591.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B, m... 44 0.47
12ref|NM_019964.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B,... 44 0.47
13ref|XM_742589.1| Aspergillus fumigatus Af293 phospholipid-transl... 44 0.47
14dbj|AK006026.1| Mus musculus adult male testis cDNA, RIKEN full-... 44 0.47
15gb|AC153927.6| Mus musculus 6 BAC RP23-74G1 (Roswell Park Cancer... 44 0.47
16dbj|AB028856.1| Mus musculus mRNA for mDj6, complete cds 44 0.47
17ref|NM_106353.2| Arabidopsis thaliana heat shock protein binding... 42 1.8
18ref|NM_113387.2| Arabidopsis thaliana unknown protein AT3G24750 ... 42 1.8
19ref|XM_483390.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
20emb|AJ720331.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.8
21gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Can... 42 1.8
22ref|NM_003471.2| Homo sapiens potassium voltage-gated channel, s... 42 1.8
23gb|AE004692.1| Pseudomonas aeruginosa PAO1, section 253 of 529 o... 42 1.8
24dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.8
25dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.8
26dbj|AK176262.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 1.8
27ref|NM_001012945.1| Gallus gallus DnaJ (Hsp40) homolog, subfamil... 42 1.8
28dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.8
29dbj|AK105364.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
30gb|U16953.1|HSU16953 Human potassium channel beta3 subunit mRNA,... 42 1.8
31gb|U17968.1|HSU17968 Human voltage-gated potassium channel beta ... 42 1.8
32gb|U17966.1|MPU17966 Mustela putorius voltage-gated potassium ch... 42 1.8
33gb|L39833.1|HUMKCHANNB Homo sapiens (clone hKvBeta3) K+ channel ... 42 1.8
34gb|AC107678.14| Mus musculus chromosome 1, clone RP23-252K18, co... 40 7.3
35gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.3
36gb|AC162944.4| Mus musculus BAC clone RP23-76L8 from chromosome ... 40 7.3
37gb|BC007577.1| Homo sapiens activating signal cointegrator 1 com... 40 7.3
38ref|XM_593945.2| PREDICTED: Bos taurus similar to tigger transpo... 40 7.3
39gb|AY572488.1| Homo sapiens 200 kDa U5 snRNP-specific spliceosom... 40 7.3
40gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 7.3
41gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome... 40 7.3
42ref|XM_859223.1| PREDICTED: Canis familiaris similar to activati... 40 7.3
43ref|XM_859204.1| PREDICTED: Canis familiaris similar to activati... 40 7.3
44ref|XM_859183.1| PREDICTED: Canis familiaris similar to activati... 40 7.3
45ref|XM_859159.1| PREDICTED: Canis familiaris similar to activati... 40 7.3
46ref|XM_859135.1| PREDICTED: Canis familiaris similar to activati... 40 7.3
47ref|XM_859107.1| PREDICTED: Canis familiaris similar to activati... 40 7.3
48ref|XM_859083.1| PREDICTED: Canis familiaris similar to activati... 40 7.3
49ref|XM_859064.1| PREDICTED: Canis familiaris similar to activati... 40 7.3
50ref|XM_532949.2| PREDICTED: Canis familiaris similar to activati... 40 7.3
51ref|XM_568298.1| Cryptococcus neoformans var. neoformans JEC21 c... 40 7.3
52ref|XM_539199.2| PREDICTED: Canis familiaris similar to tigger t... 40 7.3
53ref|XM_447789.1| Candida glabrata CBS138, CAGL0J01936g partial mRNA 40 7.3
54gb|AC126391.9| Homo sapiens chromosome 17, clone RP11-106A7, com... 40 7.3
55emb|CR714740.2|CNS0GEG0 Tetraodon nigroviridis full-length cDNA 40 7.3
56emb|CR700307.2|CNS0G3B3 Tetraodon nigroviridis full-length cDNA 40 7.3
57emb|CR690670.2|CNS0FVVE Tetraodon nigroviridis full-length cDNA 40 7.3
58emb|CR686149.2|CNS0FSDT Tetraodon nigroviridis full-length cDNA 40 7.3
59emb|CR679015.1|CNS0FMVN Tetraodon nigroviridis full-length cDNA 40 7.3
60ref|XM_544492.2| PREDICTED: Canis familiaris similar to runt-rel... 40 7.3
61ref|XM_847637.1| PREDICTED: Canis familiaris similar to runt-rel... 40 7.3
62emb|CR657451.1|CNS0F69D Tetraodon nigroviridis full-length cDNA 40 7.3
63ref|NM_032862.2| Homo sapiens tigger transposable element derive... 40 7.3
64gb|AC107703.10| Mus musculus, clone RP23-472H1, complete sequence 40 7.3
65emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 40 7.3
66emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.3
67emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 7.3
68emb|BX088707.15| Zebrafish DNA sequence from clone CH211-195B11 ... 40 7.3
69gb|AC067930.7| Homo sapiens chromosome 8, clone RP11-661A12, com... 40 7.3
70gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence 40 7.3
71emb|BX544890.7| Zebrafish DNA sequence from clone DKEY-240I4 in ... 40 7.3
72ref|NM_014014.2| Homo sapiens activating signal cointegrator 1 c... 40 7.3
73dbj|AK024391.1| Homo sapiens cDNA FLJ14329 fis, clone PLACE40002... 40 7.3
74dbj|AK023840.1| Homo sapiens cDNA FLJ13778 fis, clone PLACE40004... 40 7.3
75dbj|AK021418.1| Homo sapiens cDNA FLJ11356 fis, clone HEMBA10001... 40 7.3
76gb|AC021188.6| Homo sapiens BAC clone RP11-759A7 from 2, complet... 40 7.3
77dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
78dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
79gb|AC105210.10| Homo sapiens chromosome 8, clone RP11-118P12, co... 40 7.3
80dbj|AK223583.1| Homo sapiens mRNA for tigger transposable elemen... 40 7.3
81gb|AC016735.10| Homo sapiens BAC clone RP11-391M15 from 2, compl... 40 7.3
82gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 40 7.3
83gb|AC127521.11| Homo sapiens chromosome 17, clone RP13-580F15, c... 40 7.3
84dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
85dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
86dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
87dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
88gb|AF085356.1|AF085356 Homo sapiens putative RNA helicase mRNA, ... 40 7.3
89gb|BC065924.1| Homo sapiens activating signal cointegrator 1 com... 40 7.3
90emb|AL831994.1|HSM803301 Homo sapiens mRNA; cDNA DKFZp451J103 (f... 40 7.3
91dbj|AB018331.2| Homo sapiens mRNA for KIAA0788 protein, partial cds 40 7.3 
>ref|XM_466202.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1722

 Score =  430 bits (217), Expect = e-117
 Identities = 366/415 (88%), Gaps = 3/415 (0%)
 Strand = Plus / Plus

                                                                       
Query: 123 catggcgaaggagaccgagtactacgacgcgctcggcgtcagccccgccgcctcggacga 182
           |||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 294 catggcgaaggagaccgagttctacgacgtgctcggcgtctgccccgccgcctccgacga 353

                                                                       
Query: 183 cgagatccgcaaggcctactacatcaaggcgaggcaggtgcaccctgacaagaaccccga 242
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 354 cgagatccgcaaggcctactacatcaaggcgaggcaggtgcatcctgacaagaaccccaa 413

                                                                       
Query: 243 cgatccgcaggcgtccgacaagtttcaggctcttggagaggcctaccaggtcctgagcga 302
            |||||||| ||  |||| || || |||||||| ||||||||||||||||| ||||| ||
Sbjct: 414 tgatccgcaagccgccgagaaattccaggctctcggagaggcctaccaggtgctgagtga 473

                                                                       
Query: 303 ccctttgcagagaaaggcctatgatggctatggcaagactagcatatccagggacaacat 362
            ||| | ||||| |||||||| ||||||||||||||||| ||||| |||| ||| |||||
Sbjct: 474 tcctcttcagaggaaggcctacgatggctatggcaagaccagcatttccaaggagaacat 533

                                                                       
Query: 363 tctggatggtgctctggtcttcaccctcctgttcgggagcgagctgttcgaggactacgt 422
            ||||||||  || |||| |||||||| || |||||||| |||||||| ||||||||| |
Sbjct: 534 gctggatggcactgtggtgttcacccttcttttcgggagtgagctgtttgaggactacat 593

                                                                       
Query: 423 tggacatcttgcaatggcaacaatggcttcctcagagatggccagtggcgacaacaacaa 482
           ||| || |||||||||||||||||||||||||| ||||||||||   |||||||  ||||
Sbjct: 594 tggccaccttgcaatggcaacaatggcttcctccgagatggcca---gcgacaatgacaa 650

                                                                  
Query: 483 cgccgagaagctccaggacaggctcaagggtgtacaaagggaacgagaagagaag 537
           | | || ||||| |||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 651 ccctgaaaagcttcaggacaggctcaagggtgtgcaaagggaaagagaagagaag 705
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>dbj|AK108057.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-A01, full
           insert sequence
          Length = 1722

 Score =  422 bits (213), Expect = e-115
 Identities = 365/415 (87%), Gaps = 3/415 (0%)
 Strand = Plus / Plus

                                                                       
Query: 123 catggcgaaggagaccgagtactacgacgcgctcggcgtcagccccgccgcctcggacga 182
           |||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 294 catggcgaaggagaccgagttctacgacgtgctcggcgtctgccccgccgcctccgacga 353

                                                                       
Query: 183 cgagatccgcaaggcctactacatcaaggcgaggcaggtgcaccctgacaagaaccccga 242
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 354 cgagatccgcaaggcctactacatcaaggcgaggcaggtgcatcctgacaagaaccccaa 413

                                                                       
Query: 243 cgatccgcaggcgtccgacaagtttcaggctcttggagaggcctaccaggtcctgagcga 302
            |||||||| ||  |||| || || |||||||| ||||||||||||||||| ||||| ||
Sbjct: 414 tgatccgcaagccgccgagaaattccaggctctcggagaggcctaccaggtgctgagtga 473

                                                                       
Query: 303 ccctttgcagagaaaggcctatgatggctatggcaagactagcatatccagggacaacat 362
            ||| | ||||| |||||||| ||||||||||||||||| ||||| |||| ||| |||||
Sbjct: 474 tcctcttcagaggaaggcctacgatggctatggcaagaccagcatttccaaggagaacat 533

                                                                       
Query: 363 tctggatggtgctctggtcttcaccctcctgttcgggagcgagctgttcgaggactacgt 422
            ||||||||  || |||| |||||||| || |||||||| |||||||| ||||||||| |
Sbjct: 534 gctggatggcactgtggtgttcacccttcttttcgggagtgagctgtttgaggactacat 593

                                                                       
Query: 423 tggacatcttgcaatggcaacaatggcttcctcagagatggccagtggcgacaacaacaa 482
           ||| || |||||||||||||||||||||||||| ||||||||||   |||||||  ||||
Sbjct: 594 tggccaccttgcaatggcaacaatggcttcctccgagatggcca---gcgacaatgacaa 650

                                                                  
Query: 483 cgccgagaagctccaggacaggctcaagggtgtacaaagggaacgagaagagaag 537
           | | ||  |||| |||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 651 ccctgaacagcttcaggacaggctcaagggtgtgcaaagggaaagagaagagaag 705
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  145 bits (73), Expect = 2e-31
 Identities = 85/89 (95%)
 Strand = Plus / Minus

                                                                            
Query: 123      catggcgaaggagaccgagtactacgacgcgctcggcgtcagccccgccgcctcggacga 182
                |||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 21016218 catggcgaaggagaccgagttctacgacgtgctcggcgtctgccccgccgcctccgacga 21016159

                                             
Query: 183      cgagatccgcaaggcctactacatcaagg 211
                |||||||||||||||||||||||||||||
Sbjct: 21016158 cgagatccgcaaggcctactacatcaagg 21016130



 Score =  133 bits (67), Expect = 7e-28
 Identities = 138/161 (85%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                            
Query: 351      cagggacaacattctggatggtgctctggtcttcaccctcctgttcgggagcgagctgtt 410
                |||||| ||||| ||||||||  || |||| |||||||| || |||||||| ||||||||
Sbjct: 21015676 cagggagaacatgctggatggcactgtggtgttcacccttcttttcgggagtgagctgtt 21015617

                                                                            
Query: 411      cgaggactacgttggacatcttgcaatggcaacaatggcttcctcagagatggccagtgg 470
                 ||||||||| |||| || |||||||||||||||||||||||||| ||||||||||   |
Sbjct: 21015616 tgaggactacattggccaccttgcaatggcaacaatggcttcctccgagatggcca---g 21015560

                                                         
Query: 471      cgacaacaacaacgccgagaagctccaggacaggctcaagg 511
                ||||||  ||||| | || ||||| ||||||||||||||||
Sbjct: 21015559 cgacaatgacaaccctgaaaagcttcaggacaggctcaagg 21015519



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 75/85 (88%)
 Strand = Plus / Minus

                                                                            
Query: 268      caggctcttggagaggcctaccaggtcctgagcgaccctttgcagagaaaggcctatgat 327
                |||||||| ||||||||||||||||| ||||| || ||| | ||||| |||||||| |||
Sbjct: 21015870 caggctctcggagaggcctaccaggtgctgagtgatcctcttcagaggaaggcctacgat 21015811

                                         
Query: 328      ggctatggcaagactagcatatcca 352
                |||||||||||||| ||||| ||||
Sbjct: 21015810 ggctatggcaagaccagcatttcca 21015786



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 209      aggcgaggcaggtgcaccctgacaagaaccccgacgatccgca 251
                |||||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 21016042 aggcgaggcaggtgcatcctgacaagaaccccaatgatccgca 21016000



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 508      aagggtgtacaaagggaacgagaagagaag 537
                |||||||| ||||||||| |||||||||||
Sbjct: 21015380 aagggtgtgcaaagggaaagagaagagaag 21015351
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>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0470G10
          Length = 145419

 Score =  145 bits (73), Expect = 2e-31
 Identities = 85/89 (95%)
 Strand = Plus / Minus

                                                                          
Query: 123    catggcgaaggagaccgagtactacgacgcgctcggcgtcagccccgccgcctcggacga 182
              |||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 139690 catggcgaaggagaccgagttctacgacgtgctcggcgtctgccccgccgcctccgacga 139631

                                           
Query: 183    cgagatccgcaaggcctactacatcaagg 211
              |||||||||||||||||||||||||||||
Sbjct: 139630 cgagatccgcaaggcctactacatcaagg 139602



 Score =  133 bits (67), Expect = 7e-28
 Identities = 138/161 (85%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                          
Query: 351    cagggacaacattctggatggtgctctggtcttcaccctcctgttcgggagcgagctgtt 410
              |||||| ||||| ||||||||  || |||| |||||||| || |||||||| ||||||||
Sbjct: 139148 cagggagaacatgctggatggcactgtggtgttcacccttcttttcgggagtgagctgtt 139089

                                                                          
Query: 411    cgaggactacgttggacatcttgcaatggcaacaatggcttcctcagagatggccagtgg 470
               ||||||||| |||| || |||||||||||||||||||||||||| ||||||||||   |
Sbjct: 139088 tgaggactacattggccaccttgcaatggcaacaatggcttcctccgagatggcca---g 139032

                                                       
Query: 471    cgacaacaacaacgccgagaagctccaggacaggctcaagg 511
              ||||||  ||||| | || ||||| ||||||||||||||||
Sbjct: 139031 cgacaatgacaaccctgaaaagcttcaggacaggctcaagg 138991



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 75/85 (88%)
 Strand = Plus / Minus

                                                                          
Query: 268    caggctcttggagaggcctaccaggtcctgagcgaccctttgcagagaaaggcctatgat 327
              |||||||| ||||||||||||||||| ||||| || ||| | ||||| |||||||| |||
Sbjct: 139342 caggctctcggagaggcctaccaggtgctgagtgatcctcttcagaggaaggcctacgat 139283

                                       
Query: 328    ggctatggcaagactagcatatcca 352
              |||||||||||||| ||||| ||||
Sbjct: 139282 ggctatggcaagaccagcatttcca 139258



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                         
Query: 209    aggcgaggcaggtgcaccctgacaagaaccccgacgatccgca 251
              |||||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 139514 aggcgaggcaggtgcatcctgacaagaaccccaatgatccgca 139472



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 508    aagggtgtacaaagggaacgagaagagaag 537
              |||||||| ||||||||| |||||||||||
Sbjct: 138852 aagggtgtgcaaagggaaagagaagagaag 138823
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>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_F08
          Length = 105979

 Score =  145 bits (73), Expect = 2e-31
 Identities = 85/89 (95%)
 Strand = Plus / Minus

                                                                         
Query: 123   catggcgaaggagaccgagtactacgacgcgctcggcgtcagccccgccgcctcggacga 182
             |||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||
Sbjct: 17963 catggcgaaggagaccgagttctacgacgtgctcggcgtctgccccgccgcctccgacga 17904

                                          
Query: 183   cgagatccgcaaggcctactacatcaagg 211
             |||||||||||||||||||||||||||||
Sbjct: 17903 cgagatccgcaaggcctactacatcaagg 17875



 Score =  133 bits (67), Expect = 7e-28
 Identities = 138/161 (85%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                         
Query: 351   cagggacaacattctggatggtgctctggtcttcaccctcctgttcgggagcgagctgtt 410
             |||||| ||||| ||||||||  || |||| |||||||| || |||||||| ||||||||
Sbjct: 17421 cagggagaacatgctggatggcactgtggtgttcacccttcttttcgggagtgagctgtt 17362

                                                                         
Query: 411   cgaggactacgttggacatcttgcaatggcaacaatggcttcctcagagatggccagtgg 470
              ||||||||| |||| || |||||||||||||||||||||||||| ||||||||||   |
Sbjct: 17361 tgaggactacattggccaccttgcaatggcaacaatggcttcctccgagatggcca---g 17305

                                                      
Query: 471   cgacaacaacaacgccgagaagctccaggacaggctcaagg 511
             ||||||  ||||| | || ||||| ||||||||||||||||
Sbjct: 17304 cgacaatgacaaccctgaaaagcttcaggacaggctcaagg 17264



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 75/85 (88%)
 Strand = Plus / Minus

                                                                         
Query: 268   caggctcttggagaggcctaccaggtcctgagcgaccctttgcagagaaaggcctatgat 327
             |||||||| ||||||||||||||||| ||||| || ||| | ||||| |||||||| |||
Sbjct: 17615 caggctctcggagaggcctaccaggtgctgagtgatcctcttcagaggaaggcctacgat 17556

                                      
Query: 328   ggctatggcaagactagcatatcca 352
             |||||||||||||| ||||| ||||
Sbjct: 17555 ggctatggcaagaccagcatttcca 17531



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 209   aggcgaggcaggtgcaccctgacaagaaccccgacgatccgca 251
             |||||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 17787 aggcgaggcaggtgcatcctgacaagaaccccaatgatccgca 17745



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 508   aagggtgtacaaagggaacgagaagagaag 537
             |||||||| ||||||||| |||||||||||
Sbjct: 17125 aagggtgtgcaaagggaaagagaagagaag 17096
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>gb|AY107498.1| Zea mays PCO134240 mRNA sequence
          Length = 692

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 193 aaggcctactacatcaaggcgaggcaggtgcaccctgacaagaaccccgacgatcc 248
           ||||| |||||| |||||||||||||||| || || ||||||||||| || |||||
Sbjct: 310 aaggcatactacgtcaaggcgaggcaggtccatccggacaagaacccagatgatcc 365
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>gb|AY108538.1| Zea mays PCO063014 mRNA sequence
          Length = 842

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 193 aaggcctactacatcaaggcgaggcaggtgcaccctgacaagaaccccgacgatccgcag 252
           ||||| |||||| |||||||||||| ||| ||||| || ||||||||  | |||||||||
Sbjct: 294 aaggcgtactacgtcaaggcgaggctggtccaccccgataagaacccgaatgatccgcag 353

             
Query: 253 gc 254
           ||
Sbjct: 354 gc 355
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>dbj|AK105408.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F06, full
           insert sequence
          Length = 1670

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 193 aaggcctactacatcaaggcgaggcaggtgcaccctgacaagaaccc 239
           ||||| |||||||| ||||||||| | ||||| || |||||||||||
Sbjct: 207 aaggcgtactacatgaaggcgaggaaagtgcatccggacaagaaccc 253
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>dbj|AK103057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117K03, full
           insert sequence
          Length = 1729

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 193 aaggcctactacatcaaggcgaggcaggtgcaccctgacaagaaccc 239
           ||||| |||||||| ||||||||| | ||||| || |||||||||||
Sbjct: 267 aaggcgtactacatgaaggcgaggaaagtgcatccggacaagaaccc 313
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>gb|BC061112.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 8, mRNA
           (cDNA clone MGC:74233 IMAGE:6772873), complete cds
          Length = 1000

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 222 gcaccctgacaagaaccccgac 243
           ||||||||||||||||||||||
Sbjct: 289 gcaccctgacaagaaccccgac 310
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>gb|BC049591.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 8, mRNA
           (cDNA clone MGC:58232 IMAGE:6773959), complete cds
          Length = 997

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 222 gcaccctgacaagaaccccgac 243
           ||||||||||||||||||||||
Sbjct: 284 gcaccctgacaagaaccccgac 305
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>ref|NM_019964.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 8 (Dnajb8),
           mRNA
          Length = 989

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 222 gcaccctgacaagaaccccgac 243
           ||||||||||||||||||||||
Sbjct: 306 gcaccctgacaagaaccccgac 327
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>ref|XM_742589.1| Aspergillus fumigatus Af293 phospholipid-translocating P-type ATPase
            (Afu6g03950) partial mRNA
          Length = 3834

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 482  acgccgagaagctccaggacaggctcaagg 511
            |||||||||||||||||| || ||||||||
Sbjct: 2630 acgccgagaagctccaggtcacgctcaagg 2601
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>dbj|AK006026.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700016F14 product:DnaJ (Hsp40) homolog,
           subfamily B, member 8, full insert sequence
          Length = 973

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 222 gcaccctgacaagaaccccgac 243
           ||||||||||||||||||||||
Sbjct: 290 gcaccctgacaagaaccccgac 311
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>gb|AC153927.6| Mus musculus 6 BAC RP23-74G1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 211584

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 222    gcaccctgacaagaaccccgac 243
              ||||||||||||||||||||||
Sbjct: 146851 gcaccctgacaagaaccccgac 146872
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>dbj|AB028856.1| Mus musculus mRNA for mDj6, complete cds
          Length = 989

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 222 gcaccctgacaagaaccccgac 243
           ||||||||||||||||||||||
Sbjct: 306 gcaccctgacaagaaccccgac 327
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>ref|NM_106353.2| Arabidopsis thaliana heat shock protein binding / unfolded protein
           binding AT1G77020 mRNA, complete cds
          Length = 1315

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 184 gagatccgcaaggcctactacatcaaggcgaggcaggtgcaccctgacaagaa 236
           ||||| |||||||| || ||||||||||| || || || || |||||||||||
Sbjct: 61  gagattcgcaaggcttattacatcaaggcaagacaagttcatcctgacaagaa 113
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>ref|NM_113387.2| Arabidopsis thaliana unknown protein AT3G24750 mRNA, complete cds
          Length = 937

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 3   tcttcctccaccagaccaccactcc 27
           ||||| |||||||||||||||||||
Sbjct: 812 tcttcatccaccagaccaccactcc 788
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>ref|XM_483390.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1782

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 102/129 (79%)
 Strand = Plus / Plus

                                                                       
Query: 112 gcggctgccgccatggcgaaggagaccgagtactacgacgcgctcggcgtcagccccgcc 171
           ||||| || ||||||| ||||||||| | ||||||||||| ||| || || |||||  ||
Sbjct: 256 gcggcggcggccatggtgaaggagacggggtactacgacgtgctaggggtgagcccgacc 315

                                                                       
Query: 172 gcctcggacgacgagatccgcaaggcctactacatcaaggcgaggcaggtgcaccctgac 231
           ||| | ||   |||||||   ||||| || ||||| |||||| ||||||| || || || 
Sbjct: 316 gccaccgagtccgagatcaagaaggcgtattacatgaaggcgcggcaggtccatccggat 375

                    
Query: 232 aagaacccc 240
           |||||||||
Sbjct: 376 aagaacccc 384
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>emb|AJ720331.1| Gallus gallus mRNA for hypothetical protein, clone 15h2
          Length = 2602

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 122 ccatggcgaaggagaccgagtactacgacgcgctcggcgtcagccccgccgcctcgg 178
           |||||| ||||||||||  ||||||||||| ||| || || ||||||  ||||||||
Sbjct: 106 ccatggtgaaggagaccacgtactacgacgtgctgggagtgagccccaacgcctcgg 162
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>gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 175447

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    ctctgctctggtggtttcctg 78
             |||||||||||||||||||||
Sbjct: 31598 ctctgctctggtggtttcctg 31578
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>ref|NM_003471.2| Homo sapiens potassium voltage-gated channel, shaker-related
           subfamily, beta member 1 (KCNAB1), transcript variant 2,
           mRNA
          Length = 3301

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  ctctgctctggtggtttcctg 78
           |||||||||||||||||||||
Sbjct: 442 ctctgctctggtggtttcctg 422
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>gb|AE004692.1| Pseudomonas aeruginosa PAO1, section 253 of 529 of the complete
            genome
          Length = 10256

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 401  gcgagctgttcgaggactacg 421
            |||||||||||||||||||||
Sbjct: 9656 gcgagctgttcgaggactacg 9676
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 186     gatccgcaaggcctactacatcaag 210
               ||||||||||||| |||||||||||
Sbjct: 8000784 gatccgcaaggccaactacatcaag 8000760



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 169     gccgcctcggacgacgagatccgc 192
               ||||| ||||||||||||||||||
Sbjct: 3448891 gccgcatcggacgacgagatccgc 3448914
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 232     aagaaccccgacgatccgcag 252
               |||||||||||||||||||||
Sbjct: 5096100 aagaaccccgacgatccgcag 5096120
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>dbj|AK176262.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL23-16-N20
          Length = 980

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 3   tcttcctccaccagaccaccactcc 27
           ||||| |||||||||||||||||||
Sbjct: 812 tcttcatccaccagaccaccactcc 788
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>ref|NM_001012945.1| Gallus gallus DnaJ (Hsp40) homolog, subfamily A, member 1 (DNAJA1),
           mRNA
          Length = 2602

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 122 ccatggcgaaggagaccgagtactacgacgcgctcggcgtcagccccgccgcctcgg 178
           |||||| ||||||||||  ||||||||||| ||| || || ||||||  ||||||||
Sbjct: 106 ccatggtgaaggagaccacgtactacgacgtgctgggagtgagccccaacgcctcgg 162
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>dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8
          Length = 78529

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 3    tcttcctccaccagaccaccactcc 27
            ||||| |||||||||||||||||||
Sbjct: 9251 tcttcatccaccagaccaccactcc 9227
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>dbj|AK105364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E12, full
           insert sequence
          Length = 1782

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 102/129 (79%)
 Strand = Plus / Plus

                                                                       
Query: 112 gcggctgccgccatggcgaaggagaccgagtactacgacgcgctcggcgtcagccccgcc 171
           ||||| || ||||||| ||||||||| | ||||||||||| ||| || || |||||  ||
Sbjct: 256 gcggcggcggccatggtgaaggagacggggtactacgacgtgctaggggtgagcccgacc 315

                                                                       
Query: 172 gcctcggacgacgagatccgcaaggcctactacatcaaggcgaggcaggtgcaccctgac 231
           ||| | ||   |||||||   ||||| || ||||| |||||| ||||||| || || || 
Sbjct: 316 gccaccgagtccgagatcaagaaggcgtattacatgaaggcgcggcaggtccatccggat 375

                    
Query: 232 aagaacccc 240
           |||||||||
Sbjct: 376 aagaacccc 384
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>gb|U16953.1|HSU16953 Human potassium channel beta3 subunit mRNA, complete cds
          Length = 1560

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  ctctgctctggtggtttcctg 78
           |||||||||||||||||||||
Sbjct: 292 ctctgctctggtggtttcctg 272
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>gb|U17968.1|HSU17968 Human voltage-gated potassium channel beta subunit mRNA, partial
           cds
          Length = 400

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  ctctgctctggtggtttcctg 78
           |||||||||||||||||||||
Sbjct: 217 ctctgctctggtggtttcctg 197
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>gb|U17966.1|MPU17966 Mustela putorius voltage-gated potassium channel beta-subunit mRNA,
           complete cds
          Length = 1426

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  ctctgctctggtggtttcctg 78
           |||||||||||||||||||||
Sbjct: 288 ctctgctctggtggtttcctg 268
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>gb|L39833.1|HUMKCHANNB Homo sapiens (clone hKvBeta3) K+ channel beta subunit mRNA,
           complete cds
          Length = 3176

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  ctctgctctggtggtttcctg 78
           |||||||||||||||||||||
Sbjct: 313 ctctgctctggtggtttcctg 293
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>gb|AC107678.14| Mus musculus chromosome 1, clone RP23-252K18, complete sequence
          Length = 169766

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 373   gctctggtcttcaccctcctgttc 396
             ||||||||||||||||||| ||||
Sbjct: 33000 gctctggtcttcaccctccagttc 33023
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>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete
              sequence
          Length = 787999

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    gcaccctgacaagaaccccg 241
              ||||||||||||||||||||
Sbjct: 339161 gcaccctgacaagaaccccg 339180
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>gb|AC162944.4| Mus musculus BAC clone RP23-76L8 from chromosome 13, complete sequence
          Length = 155927

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     ttcttcctccaccagaccaccact 25
             |||||||||||| |||||||||||
Sbjct: 28824 ttcttcctccacaagaccaccact 28801
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>gb|BC007577.1| Homo sapiens activating signal cointegrator 1 complex subunit 3-like
            1, mRNA (cDNA clone IMAGE:3139787), partial cds
          Length = 4220

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 1698 cgagaagttccaggacaggctcaa 1721
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>ref|XM_593945.2| PREDICTED: Bos taurus similar to tigger transposable element
           derived 5 (LOC540422), mRNA
          Length = 2299

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 188 tccgcaaggcctactacatcaagg 211
           ||||||||||||||| ||||||||
Sbjct: 101 tccgcaaggcctactccatcaagg 124
to top
>gb|AY572488.1| Homo sapiens 200 kDa U5 snRNP-specific spliceosomal protein (BRR2)
            mRNA, complete cds
          Length = 6769

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4260 cgagaagttccaggacaggctcaa 4283
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    ggagcggctgccgccatggc 128
              ||||||||||||||||||||
Sbjct: 223645 ggagcggctgccgccatggc 223626
to top
>gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome 13, complete sequence
          Length = 241514

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     ttcttcctccaccagaccaccact 25
             |||||||||||| |||||||||||
Sbjct: 36189 ttcttcctccacaagaccaccact 36212
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>ref|XM_859223.1| PREDICTED: Canis familiaris similar to activating signal cointegrator
            1 complex subunit 3-like 1, transcript variant 12
            (LOC475742), mRNA
          Length = 6794

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4240 cgagaagttccaggacaggctcaa 4263
to top
>ref|XM_859204.1| PREDICTED: Canis familiaris similar to activating signal cointegrator
            1 complex subunit 3-like 1, transcript variant 11
            (LOC475742), mRNA
          Length = 6818

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4264 cgagaagttccaggacaggctcaa 4287
to top
>ref|XM_859183.1| PREDICTED: Canis familiaris similar to activating signal cointegrator
            1 complex subunit 3-like 1, transcript variant 10
            (LOC475742), mRNA
          Length = 6725

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4171 cgagaagttccaggacaggctcaa 4194
to top
>ref|XM_859159.1| PREDICTED: Canis familiaris similar to activating signal cointegrator
            1 complex subunit 3-like 1, transcript variant 9
            (LOC475742), mRNA
          Length = 6788

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4234 cgagaagttccaggacaggctcaa 4257
to top
>ref|XM_859135.1| PREDICTED: Canis familiaris similar to activating signal cointegrator
            1 complex subunit 3-like 1, transcript variant 8
            (LOC475742), mRNA
          Length = 6770

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4216 cgagaagttccaggacaggctcaa 4239
to top
>ref|XM_859107.1| PREDICTED: Canis familiaris similar to activating signal cointegrator
            1 complex subunit 3-like 1, transcript variant 7
            (LOC475742), mRNA
          Length = 6803

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4246 cgagaagttccaggacaggctcaa 4269
to top
>ref|XM_859083.1| PREDICTED: Canis familiaris similar to activating signal cointegrator
            1 complex subunit 3-like 1, transcript variant 6
            (LOC475742), mRNA
          Length = 6827

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4249 cgagaagttccaggacaggctcaa 4272
to top
>ref|XM_859064.1| PREDICTED: Canis familiaris similar to activating signal cointegrator
            1 complex subunit 3-like 1, transcript variant 5
            (LOC475742), mRNA
          Length = 6812

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4249 cgagaagttccaggacaggctcaa 4272
to top
>ref|XM_532949.2| PREDICTED: Canis familiaris similar to activating signal cointegrator
            1 complex subunit 3-like 1, transcript variant 1
            (LOC475742), mRNA
          Length = 6803

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4249 cgagaagttccaggacaggctcaa 4272
to top
>ref|XM_568298.1| Cryptococcus neoformans var. neoformans JEC21 chaperone regulator
           (CNM01120) partial mRNA
          Length = 1310

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 gcaccctgacaagaaccccg 241
           ||||||||||||||||||||
Sbjct: 176 gcaccctgacaagaaccccg 195
to top
>ref|XM_539199.2| PREDICTED: Canis familiaris similar to tigger transposable element
           derived 5 (LOC482078), mRNA
          Length = 2544

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 188 tccgcaaggcctactacatcaagg 211
           ||||||||||||||| ||||||||
Sbjct: 761 tccgcaaggcctactccatcaagg 784
to top
>ref|XM_447789.1| Candida glabrata CBS138, CAGL0J01936g partial mRNA
          Length = 1278

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 217 caggtgcaccctgacaagaaccccgacgatcc 248
           |||| ||||||||||||||| ||| |||||||
Sbjct: 94  caggagcaccctgacaagaatcccaacgatcc 125
to top
>gb|AC126391.9| Homo sapiens chromosome 17, clone RP11-106A7, complete sequence
          Length = 56981

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   cctcagagatggccagtggc 471
             ||||||||||||||||||||
Sbjct: 40890 cctcagagatggccagtggc 40871
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>emb|CR714740.2|CNS0GEG0 Tetraodon nigroviridis full-length cDNA
          Length = 860

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 agaggcctaccaggtcctgagcgaccct 306
           |||||| |||||| ||||||||||||||
Sbjct: 375 agaggcgtaccagttcctgagcgaccct 402
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>emb|CR700307.2|CNS0G3B3 Tetraodon nigroviridis full-length cDNA
          Length = 1074

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 agaggcctaccaggtcctgagcgaccct 306
           |||||| |||||| ||||||||||||||
Sbjct: 505 agaggcgtaccagttcctgagcgaccct 532
to top
>emb|CR690670.2|CNS0FVVE Tetraodon nigroviridis full-length cDNA
          Length = 1074

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 agaggcctaccaggtcctgagcgaccct 306
           |||||| |||||| ||||||||||||||
Sbjct: 506 agaggcgtaccagttcctgagcgaccct 533
to top
>emb|CR686149.2|CNS0FSDT Tetraodon nigroviridis full-length cDNA
          Length = 1049

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 agaggcctaccaggtcctgagcgaccct 306
           |||||| |||||| ||||||||||||||
Sbjct: 495 agaggcgtaccagttcctgagcgaccct 522
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>emb|CR679015.1|CNS0FMVN Tetraodon nigroviridis full-length cDNA
          Length = 840

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 agaggcctaccaggtcctgagcgaccct 306
           |||||| |||||| ||||||||||||||
Sbjct: 359 agaggcgtaccagttcctgagcgaccct 386
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>ref|XM_544492.2| PREDICTED: Canis familiaris similar to runt-related transcription
           factor 3, transcript variant 1 (LOC487366), mRNA
          Length = 1245

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 gggagcggctgccgccatgg 127
           ||||||||||||||||||||
Sbjct: 554 gggagcggctgccgccatgg 573
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>ref|XM_847637.1| PREDICTED: Canis familiaris similar to runt-related transcription
           factor 3, transcript variant 2 (LOC487366), mRNA
          Length = 1239

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 gggagcggctgccgccatgg 127
           ||||||||||||||||||||
Sbjct: 554 gggagcggctgccgccatgg 573
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>emb|CR657451.1|CNS0F69D Tetraodon nigroviridis full-length cDNA
          Length = 925

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 agaggcctaccaggtcctgagcgaccct 306
           |||||| |||||| ||||||||||||||
Sbjct: 364 agaggcgtaccagttcctgagcgaccct 391
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>ref|NM_032862.2| Homo sapiens tigger transposable element derived 5 (TIGD5), mRNA
          Length = 2264

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 188 tccgcaaggcctactacatcaagg 211
           ||||||||||||||| ||||||||
Sbjct: 8   tccgcaaggcctactccatcaagg 31
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>gb|AC107703.10| Mus musculus, clone RP23-472H1, complete sequence
          Length = 215019

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     attccatgctctgctctggt 69
              ||||||||||||||||||||
Sbjct: 119603 attccatgctctgctctggt 119584
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>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 217    caggtgcaccctgacaagaaccccgacgatcc 248
              |||| ||||||||||||||| ||| |||||||
Sbjct: 191365 caggagcaccctgacaagaatcccaacgatcc 191334
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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   ggacgacgagatccgcaagg 196
             ||||||||||||||||||||
Sbjct: 33639 ggacgacgagatccgcaagg 33620
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>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    ggacgacgagatccgcaagg 196
              ||||||||||||||||||||
Sbjct: 277114 ggacgacgagatccgcaagg 277095
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>emb|BX088707.15| Zebrafish DNA sequence from clone CH211-195B11 in linkage group 14,
              complete sequence
          Length = 137128

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 427    catcttgcaatggcaacaat 446
              ||||||||||||||||||||
Sbjct: 124155 catcttgcaatggcaacaat 124174
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>gb|AC067930.7| Homo sapiens chromosome 8, clone RP11-661A12, complete sequence
          Length = 174906

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 188    tccgcaaggcctactacatcaagg 211
              ||||||||||||||| ||||||||
Sbjct: 136223 tccgcaaggcctactccatcaagg 136246
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>gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence
          Length = 185378

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    cctcagagatggccagtggc 471
              ||||||||||||||||||||
Sbjct: 168553 cctcagagatggccagtggc 168572
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>emb|BX544890.7| Zebrafish DNA sequence from clone DKEY-240I4 in linkage group 14,
             complete sequence
          Length = 93993

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   catcttgcaatggcaacaat 446
             ||||||||||||||||||||
Sbjct: 28118 catcttgcaatggcaacaat 28137
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>ref|NM_014014.2| Homo sapiens activating signal cointegrator 1 complex subunit 3-like
            1 (ASCC3L1), mRNA
          Length = 7184

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 4268 cgagaagttccaggacaggctcaa 4291
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>dbj|AK024391.1| Homo sapiens cDNA FLJ14329 fis, clone PLACE4000259, highly similar to
            H.sapiens gene for U5 snRNP-specific 200kD protein
          Length = 5898

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 3395 cgagaagttccaggacaggctcaa 3418
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>dbj|AK023840.1| Homo sapiens cDNA FLJ13778 fis, clone PLACE4000431, highly similar to
            H.sapiens gene for U5 snRNP-specific 200kD protein
          Length = 5834

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 3325 cgagaagttccaggacaggctcaa 3348
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>dbj|AK021418.1| Homo sapiens cDNA FLJ11356 fis, clone HEMBA1000150, highly similar
           to Homo sapiens putative RNA helicase mRNA
          Length = 3409

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 486 cgagaagctccaggacaggctcaa 509
           ||||||| ||||||||||||||||
Sbjct: 307 cgagaagttccaggacaggctcaa 330
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>gb|AC021188.6| Homo sapiens BAC clone RP11-759A7 from 2, complete sequence
          Length = 236486

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 486   cgagaagctccaggacaggctcaa 509
             ||||||| ||||||||||||||||
Sbjct: 18988 cgagaagttccaggacaggctcaa 18965
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 121     gccatggcgaaggagaccga 140
               ||||||||||||||||||||
Sbjct: 9823435 gccatggcgaaggagaccga 9823454
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 112      gcggctgccgccatggcgaaggagaccgagtactacgacg 151
                ||||| || ||||||| ||||||||| | |||||||||||
Sbjct: 25972484 gcggcggcggccatggtgaaggagacggggtactacgacg 25972523
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>gb|AC105210.10| Homo sapiens chromosome 8, clone RP11-118P12, complete sequence
          Length = 101777

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 188   tccgcaaggcctactacatcaagg 211
             ||||||||||||||| ||||||||
Sbjct: 28659 tccgcaaggcctactccatcaagg 28682
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>dbj|AK223583.1| Homo sapiens mRNA for tigger transposable element derived 5
           variant, clone: FCC130C09
          Length = 2001

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 188 tccgcaaggcctactacatcaagg 211
           ||||||||||||||| ||||||||
Sbjct: 154 tccgcaaggcctactccatcaagg 177
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>gb|AC016735.10| Homo sapiens BAC clone RP11-391M15 from 2, complete sequence
          Length = 182730

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   ggacaacattctggatggtg 373
             ||||||||||||||||||||
Sbjct: 70693 ggacaacattctggatggtg 70712
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    tcttgcaatggcaacaatgg 448
              ||||||||||||||||||||
Sbjct: 241097 tcttgcaatggcaacaatgg 241078
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>gb|AC127521.11| Homo sapiens chromosome 17, clone RP13-580F15, complete sequence
          Length = 31450

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 452  cctcagagatggccagtggc 471
            ||||||||||||||||||||
Sbjct: 1539 cctcagagatggccagtggc 1558
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>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0040N23
          Length = 101061

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   gccatggcgaaggagaccga 140
             ||||||||||||||||||||
Sbjct: 95854 gccatggcgaaggagaccga 95873
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>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OSJNBb0095I04
          Length = 138924

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gccatggcgaaggagaccga 140
            ||||||||||||||||||||
Sbjct: 6122 gccatggcgaaggagaccga 6141
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>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1186_G01
          Length = 112077

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 112  gcggctgccgccatggcgaaggagaccgagtactacgacg 151
            ||||| || ||||||| ||||||||| | |||||||||||
Sbjct: 8045 gcggcggcggccatggtgaaggagacggggtactacgacg 8084
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>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1081_B12
          Length = 124741

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 112   gcggctgccgccatggcgaaggagaccgagtactacgacg 151
             ||||| || ||||||| ||||||||| | |||||||||||
Sbjct: 57361 gcggcggcggccatggtgaaggagacggggtactacgacg 57400
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>gb|AF085356.1|AF085356 Homo sapiens putative RNA helicase mRNA, complete cds
          Length = 2686

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 486 cgagaagctccaggacaggctcaa 509
           ||||||| ||||||||||||||||
Sbjct: 156 cgagaagttccaggacaggctcaa 179
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>gb|BC065924.1| Homo sapiens activating signal cointegrator 1 complex subunit 3-like
            1, mRNA (cDNA clone IMAGE:6048229), partial cds
          Length = 5755

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 3237 cgagaagttccaggacaggctcaa 3260
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>emb|AL831994.1|HSM803301 Homo sapiens mRNA; cDNA DKFZp451J103 (from clone DKFZp451J103)
          Length = 5556

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 3030 cgagaagttccaggacaggctcaa 3053
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>dbj|AB018331.2| Homo sapiens mRNA for KIAA0788 protein, partial cds
          Length = 6754

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  cgagaagctccaggacaggctcaa 509
            ||||||| ||||||||||||||||
Sbjct: 3852 cgagaagttccaggacaggctcaa 3875


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,800,959
Number of Sequences: 3902068
Number of extensions: 4800959
Number of successful extensions: 79730
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79301
Number of HSP's gapped (non-prelim): 424
length of query: 537
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 514
effective length of database: 17,143,297,704
effective search space: 8811655019856
effective search space used: 8811655019856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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