ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13d04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479205.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1049 Score = 527 bits (266), Expect = e-146 Identities = 371/406 (91%) Strand = Plus / Plus Query: 173 ggaggtggttgctgagaacatgttgggtgactagaaagtcacagtagtatttgttcttgg 232 ||||| |||||||||||||||||||||||| ||||||| ||||| ||||||||||| || Sbjct: 187 ggagggggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttctagg 246 Query: 233 tggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcac 292 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 tggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattcac 306 Query: 293 ccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatggaac 352 ||| | ||||||||||| |||||||| || ||||| |||||||| |||||||||||||| Sbjct: 307 ccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatggaac 366 Query: 353 tatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataaagct 412 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 367 tatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataaagct 426 Query: 413 cttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttccaag 472 |||||| | |||||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 427 cttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcccaag 486 Query: 473 gaatgaagagaatcgtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgct 532 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 487 gaatgaagagaatcgtgctgccttcgagaatgttacaaaaatttcccctgcatttgtgct 546 Query: 533 attctttaattgttccgaggaagagatggaaagacgtcttttggga 578 ||| ||| | ||||| || ||||||||||||||||||||||||||| Sbjct: 547 attttttgactgttctgaagaagagatggaaagacgtcttttggga 592
>gb|AF187063.1|AF187063 Oryza sativa UMP/CMP kinase b (ura6) mRNA, complete cds Length = 1203 Score = 527 bits (266), Expect = e-146 Identities = 371/406 (91%) Strand = Plus / Plus Query: 173 ggaggtggttgctgagaacatgttgggtgactagaaagtcacagtagtatttgttcttgg 232 ||||| |||||||||||||||||||||||| ||||||| ||||| ||||||||||| || Sbjct: 179 ggagggggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttctagg 238 Query: 233 tggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcac 292 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 tggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattcac 298 Query: 293 ccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatggaac 352 ||| | ||||||||||| |||||||| || ||||| |||||||| |||||||||||||| Sbjct: 299 ccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatggaac 358 Query: 353 tatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataaagct 412 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 359 tatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataaagct 418 Query: 413 cttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttccaag 472 |||||| | |||||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 419 cttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcccaag 478 Query: 473 gaatgaagagaatcgtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgct 532 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 479 gaatgaagagaatcgtgctgccttcgagaatgttacaaaaatttcccctgcatttgtgct 538 Query: 533 attctttaattgttccgaggaagagatggaaagacgtcttttggga 578 ||| ||| | ||||| || ||||||||||||||||||||||||||| Sbjct: 539 attttttgactgttctgaagaagagatggaaagacgtcttttggga 584
>gb|AF187062.1|AF187062 Oryza sativa UMP/CMP kinase a (ura6) mRNA, complete cds Length = 1148 Score = 527 bits (266), Expect = e-146 Identities = 371/406 (91%) Strand = Plus / Plus Query: 173 ggaggtggttgctgagaacatgttgggtgactagaaagtcacagtagtatttgttcttgg 232 ||||| |||||||||||||||||||||||| ||||||| ||||| ||||||||||| || Sbjct: 172 ggagggggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttctagg 231 Query: 233 tggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcac 292 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 tggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattcac 291 Query: 293 ccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatggaac 352 ||| | ||||||||||| |||||||| || ||||| |||||||| |||||||||||||| Sbjct: 292 ccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatggaac 351 Query: 353 tatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataaagct 412 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 352 tatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataaagct 411 Query: 413 cttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttccaag 472 |||||| | |||||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 412 cttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcccaag 471 Query: 473 gaatgaagagaatcgtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgct 532 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 472 gaatgaagagaatcgtgctgccttcgagaatgttacaaaaatttcccctgcatttgtgct 531 Query: 533 attctttaattgttccgaggaagagatggaaagacgtcttttggga 578 ||| ||| | ||||| || ||||||||||||||||||||||||||| Sbjct: 532 attttttgactgttctgaagaagagatggaaagacgtcttttggga 577
>dbj|AK072973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149K03, full insert sequence Length = 1048 Score = 527 bits (266), Expect = e-146 Identities = 371/406 (91%) Strand = Plus / Plus Query: 173 ggaggtggttgctgagaacatgttgggtgactagaaagtcacagtagtatttgttcttgg 232 ||||| |||||||||||||||||||||||| ||||||| ||||| ||||||||||| || Sbjct: 187 ggagggggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttctagg 246 Query: 233 tggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcac 292 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 tggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattcac 306 Query: 293 ccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatggaac 352 ||| | ||||||||||| |||||||| || ||||| |||||||| |||||||||||||| Sbjct: 307 ccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatggaac 366 Query: 353 tatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataaagct 412 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 367 tatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataaagct 426 Query: 413 cttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttccaag 472 |||||| | |||||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 427 cttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcccaag 486 Query: 473 gaatgaagagaatcgtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgct 532 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 487 gaatgaagagaatcgtgctgccttcgagaatgttacaaaaatttcccctgcatttgtgct 546 Query: 533 attctttaattgttccgaggaagagatggaaagacgtcttttggga 578 ||| ||| | ||||| || ||||||||||||||||||||||||||| Sbjct: 547 attttttgactgttctgaagaagagatggaaagacgtcttttggga 592
>gb|BT017816.1| Zea mays clone EL01N0507E06.c mRNA sequence Length = 1311 Score = 500 bits (252), Expect = e-138 Identities = 401/451 (88%), Gaps = 6/451 (1%) Strand = Plus / Plus Query: 127 gagccatgggcacggttgtggatgctcccgcagctgtgactgagaaggaggtggttgctg 186 ||||||||||||| |||||||||||||| |||| |||| |||| ||| | ||| Sbjct: 135 gagccatgggcacagttgtggatgctccagcagttgtggctgaagagg------tcactg 188 Query: 187 agaacatgttgggtgactagaaagtcacagtagtatttgttcttggtggtcctggaagtg 246 ||||||||||||||| ||||||| |||| ||||||||||| |||||||||||||||| Sbjct: 189 agaacatgttgggtggtaagaaagttacagctgtatttgttctaggtggtcctggaagtg 248 Query: 247 gaaagggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgctg 306 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gaaaaggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgctg 308 Query: 307 gagatcttttgcgcgcggagattaaatctggctctgagaatggaactatgattgagaaca 366 ||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 309 gagatcttttgcgtgctgagattaaatctggctctgagaatggaaccatgattgaaaaca 368 Query: 367 tgataaaggagggaaagattgttccatcggaggtgactataaagctcttgcagcaagcca 426 |||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || | Sbjct: 369 tgataaaggagggaaagattgttccatcagaggtgactataaagctgttgcaggaggcaa 428 Query: 427 tgataaagaatgagaatgataagttcctcatcgacgggtttccaaggaatgaagagaatc 486 ||||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||| Sbjct: 429 tgataaaaaatgaaaatgacaaattcctgatcgacggatttccaaggaatgaggagaatc 488 Query: 487 gtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgctattctttaattgtt 546 |||| || || ||||||||||| |||||||| ||||||||||||||||||||| | |||| Sbjct: 489 gtgcagcatttgagaatgttaccaaaatttctcctgcatttgtgctattctttgactgtt 548 Query: 547 ccgaggaagagatggaaagacgtcttttggg 577 | ||| |||||||||| | |||||| ||||| Sbjct: 549 ctgagaaagagatggagaaacgtctcttggg 579
>ref|XM_468084.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1088 Score = 490 bits (247), Expect = e-135 Identities = 400/451 (88%) Strand = Plus / Plus Query: 128 agccatgggcacggttgtggatgctcccgcagctgtgactgagaaggaggtggttgctga 187 ||||||||| |||||||||||||||| ||| |||| ||| |||||| ||| |||| Sbjct: 43 agccatgggttcggttgtggatgctccaacagttgtggctggacaggaggaggtcactga 102 Query: 188 gaacatgttgggtgactagaaagtcacagtagtatttgttcttggtggtcctggaagtgg 247 ||||||||||||||| ||||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 103 caacatgttgggtgacaagaaagttacagttgtatttgttctaggtggtcctgggagtgg 162 Query: 248 aaagggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgctgg 307 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 163 aaagggcacacagtgtgccaacattgttgaacactttggattcattcatcttagtgctgg 222 Query: 308 agatcttttgcgcgcggagattaaatctggctctgagaatggaactatgattgagaacat 367 ||| |||||||| || ||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 223 agaccttttgcgtgcagagatcaaatctggctctgagaacggaactatgatcgagaacat 282 Query: 368 gataaaggagggaaagattgttccatcggaggtgactataaagctcttgcagcaagccat 427 ||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 283 gataaaggagggaaagattgttccatctgaggtaactataaaactcttgcaggaagccat 342 Query: 428 gataaagaatgagaatgataagttcctcatcgacgggtttccaaggaatgaagagaatcg 487 ||| || | || |||||||||||||| || || || ||||||||||| ||||||||||| Sbjct: 343 gattaaaagtggaaatgataagttccttattgatggatttccaaggaacgaagagaatcg 402 Query: 488 tgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgctattctttaattgttc 547 |||||| || ||||| ||||||||||| | ||||| |||||||||||||| ||||||| Sbjct: 403 tgctgcatttgagaacgttacaaaaataactcctgcgtttgtgctattcttcgattgttc 462 Query: 548 cgaggaagagatggaaagacgtcttttggga 578 |||||||||||||||||||||||||||||| Sbjct: 463 tgaggaagagatggaaagacgtcttttggga 493
>dbj|AK103372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127A22, full insert sequence Length = 1134 Score = 490 bits (247), Expect = e-135 Identities = 400/451 (88%) Strand = Plus / Plus Query: 128 agccatgggcacggttgtggatgctcccgcagctgtgactgagaaggaggtggttgctga 187 ||||||||| |||||||||||||||| ||| |||| ||| |||||| ||| |||| Sbjct: 90 agccatgggttcggttgtggatgctccaacagttgtggctggacaggaggaggtcactga 149 Query: 188 gaacatgttgggtgactagaaagtcacagtagtatttgttcttggtggtcctggaagtgg 247 ||||||||||||||| ||||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 150 caacatgttgggtgacaagaaagttacagttgtatttgttctaggtggtcctgggagtgg 209 Query: 248 aaagggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgctgg 307 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 210 aaagggcacacagtgtgccaacattgttgaacactttggattcattcatcttagtgctgg 269 Query: 308 agatcttttgcgcgcggagattaaatctggctctgagaatggaactatgattgagaacat 367 ||| |||||||| || ||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 270 agaccttttgcgtgcagagatcaaatctggctctgagaacggaactatgatcgagaacat 329 Query: 368 gataaaggagggaaagattgttccatcggaggtgactataaagctcttgcagcaagccat 427 ||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 330 gataaaggagggaaagattgttccatctgaggtaactataaaactcttgcaggaagccat 389 Query: 428 gataaagaatgagaatgataagttcctcatcgacgggtttccaaggaatgaagagaatcg 487 ||| || | || |||||||||||||| || || || ||||||||||| ||||||||||| Sbjct: 390 gattaaaagtggaaatgataagttccttattgatggatttccaaggaacgaagagaatcg 449 Query: 488 tgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgctattctttaattgttc 547 |||||| || ||||| ||||||||||| | ||||| |||||||||||||| ||||||| Sbjct: 450 tgctgcatttgagaacgttacaaaaataactcctgcgtttgtgctattcttcgattgttc 509 Query: 548 cgaggaagagatggaaagacgtcttttggga 578 |||||||||||||||||||||||||||||| Sbjct: 510 tgaggaagagatggaaagacgtcttttggga 540
>gb|AY105887.1| Zea mays PCO123975 mRNA sequence Length = 1471 Score = 458 bits (231), Expect = e-125 Identities = 342/379 (90%) Strand = Plus / Plus Query: 184 ctgagaacatgttgggtgactagaaagtcacagtagtatttgttcttggtggtcctggaa 243 |||||||||||||||||| | ||||||| ||||| |||||||| || ||||||||||||| Sbjct: 419 ctgagaacatgttgggtggcaagaaagttacagttgtatttgtcctaggtggtcctggaa 478 Query: 244 gtggaaagggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtg 303 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 479 gtggaaaaggcacacagtgtgccaacatcgtggagcactttggattcacccatcttagtg 538 Query: 304 ctggagatcttttgcgcgcggagattaaatctggctctgagaatggaactatgattgaga 363 ||||||||||| |||| || ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 539 ctggagatcttctgcgtgcagagattaaatctggctctgagaacggaaccatgattgaga 598 Query: 364 acatgataaaggagggaaagattgttccatcggaggtgactataaagctcttgcagcaag 423 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | Sbjct: 599 acatgataaaggagggaaagattgttccatcggaggtgactataaagcttttgcaggagg 658 Query: 424 ccatgataaagaatgagaatgataagttcctcatcgacgggtttccaaggaatgaagaga 483 | |||||||| | ||| ||||| || ||||| ||||| || |||||||||||||| |||| Sbjct: 659 caatgataaaaagtgaaaatgacaaattcctgatcgatggatttccaaggaatgaggaga 718 Query: 484 atcgtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgctattctttaatt 543 ||||||| || || ||||||||||| |||||||| ||||||||||||||||||||| | | Sbjct: 719 atcgtgcagcctttgagaatgttaccaaaatttctcctgcatttgtgctattctttgact 778 Query: 544 gttccgaggaagagatgga 562 |||| || ||||| ||||| Sbjct: 779 gttctgaagaagatatgga 797 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 127 gagccatgggcacggttgtggatgc 151 ||||||||||||| ||||||||||| Sbjct: 368 gagccatgggcacagttgtggatgc 392
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 202 bits (102), Expect = 9e-49 Identities = 144/158 (91%) Strand = Plus / Minus Query: 349 gaactatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataa 408 ||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 25826952 gaactatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataa 25826893 Query: 409 agctcttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttc 468 |||||||||| | |||||||| || ||||||||||||||||| || ||||| ||||| | Sbjct: 25826892 agctcttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcc 25826833 Query: 469 caaggaatgaagagaatcgtgctgcgttcgagaatgtt 506 ||||||||||||||||||||||||| |||||||||||| Sbjct: 25826832 caaggaatgaagagaatcgtgctgccttcgagaatgtt 25826795 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 25827178 ggtggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattc 25827119 Query: 291 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatgg 349 ||||| | ||||||||||| |||||||| || ||||| |||||||| ||||||||||| Sbjct: 25827118 acccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatgg 25827060 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 507 acaaaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaaga 566 ||||||||||| ||||||||||||||||| ||| | ||||| || ||||||||||||||| Sbjct: 25826635 acaaaaatttcccctgcatttgtgctattttttgactgttctgaagaagagatggaaaga 25826576 Query: 567 cgtcttttggga 578 |||||||||||| Sbjct: 25826575 cgtcttttggga 25826564 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 179 ggttgctgagaacatgttgggtgactagaaagtcacagtagtatttgttct 229 |||||||||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 25827337 ggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttct 25827287
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 202 bits (102), Expect = 9e-49 Identities = 144/158 (91%) Strand = Plus / Minus Query: 349 gaactatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataa 408 ||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 144114 gaactatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataa 144055 Query: 409 agctcttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttc 468 |||||||||| | |||||||| || ||||||||||||||||| || ||||| ||||| | Sbjct: 144054 agctcttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcc 143995 Query: 469 caaggaatgaagagaatcgtgctgcgttcgagaatgtt 506 ||||||||||||||||||||||||| |||||||||||| Sbjct: 143994 caaggaatgaagagaatcgtgctgccttcgagaatgtt 143957 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 144340 ggtggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattc 144281 Query: 291 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatgg 349 ||||| | ||||||||||| |||||||| || ||||| |||||||| ||||||||||| Sbjct: 144280 acccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatgg 144222 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 507 acaaaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaaga 566 ||||||||||| ||||||||||||||||| ||| | ||||| || ||||||||||||||| Sbjct: 143797 acaaaaatttcccctgcatttgtgctattttttgactgttctgaagaagagatggaaaga 143738 Query: 567 cgtcttttggga 578 |||||||||||| Sbjct: 143737 cgtcttttggga 143726 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 179 ggttgctgagaacatgttgggtgactagaaagtcacagtagtatttgttct 229 |||||||||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 144499 ggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttct 144449
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 170 bits (86), Expect = 3e-39 Identities = 137/154 (88%) Strand = Plus / Plus Query: 349 gaactatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataa 408 |||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 32971566 gaactatgatcgagaacatgataaaggagggaaagattgttccatctgaggtaactataa 32971625 Query: 409 agctcttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttc 468 | ||||||||| |||||||||| || | || |||||||||||||| || || || |||| Sbjct: 32971626 aactcttgcaggaagccatgattaaaagtggaaatgataagttccttattgatggatttc 32971685 Query: 469 caaggaatgaagagaatcgtgctgcgttcgagaa 502 ||||||| ||||||||||||||||| || ||||| Sbjct: 32971686 caaggaacgaagagaatcgtgctgcatttgagaa 32971719 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 32971299 ggtggtcctgggagtggaaagggcacacagtgtgccaacattgttgaacactttggattc 32971358 Query: 291 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaa 346 | ||||||||||||||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 32971359 attcatcttagtgctggagaccttttgcgtgcagagatcaaatctggctctgagaa 32971414 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 519 cctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgtcttttggga 578 ||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 32971902 cctgcgtttgtgctattcttcgattgttctgaggaagagatggaaagacgtcttttggga 32971961 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 184 ctgagaacatgttgggtgactagaaagtcacagtagtatttgttct 229 |||| ||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 32971066 ctgacaacatgttgggtgacaagaaagttacagttgtatttgttct 32971111
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 170 bits (86), Expect = 3e-39 Identities = 137/154 (88%) Strand = Plus / Plus Query: 349 gaactatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataa 408 |||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 17506 gaactatgatcgagaacatgataaaggagggaaagattgttccatctgaggtaactataa 17565 Query: 409 agctcttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttc 468 | ||||||||| |||||||||| || | || |||||||||||||| || || || |||| Sbjct: 17566 aactcttgcaggaagccatgattaaaagtggaaatgataagttccttattgatggatttc 17625 Query: 469 caaggaatgaagagaatcgtgctgcgttcgagaa 502 ||||||| ||||||||||||||||| || ||||| Sbjct: 17626 caaggaacgaagagaatcgtgctgcatttgagaa 17659 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 17239 ggtggtcctgggagtggaaagggcacacagtgtgccaacattgttgaacactttggattc 17298 Query: 291 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaa 346 | ||||||||||||||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 17299 attcatcttagtgctggagaccttttgcgtgcagagatcaaatctggctctgagaa 17354 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 519 cctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgtcttttggga 578 ||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 17842 cctgcgtttgtgctattcttcgattgttctgaggaagagatggaaagacgtcttttggga 17901 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 184 ctgagaacatgttgggtgactagaaagtcacagtagtatttgttct 229 |||| ||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 17006 ctgacaacatgttgggtgacaagaaagttacagttgtatttgttct 17051
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 126040 ggtggtcctgggagtggaaagggcacacagtgtgccaacattgttgaacactttggattc 126099 Query: 291 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaa 346 | ||||||||||||||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 126100 attcatcttagtgctggagaccttttgcgtgcagagatcaaatctggctctgagaa 126155 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 184 ctgagaacatgttgggtgactagaaagtcacagtagtatttgttct 229 |||| ||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 125807 ctgacaacatgttgggtgacaagaaagttacagttgtatttgttct 125852
>ref|NM_180536.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase AT5G26667 transcript variant AT5G26667.1 mRNA, complete cds Length = 875 Score = 121 bits (61), Expect = 3e-24 Identities = 160/193 (82%) Strand = Plus / Plus Query: 220 tatttgttcttggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaac 279 ||||||||||||||||||| ||||||||||| || || |||||||| | ||||| |||| Sbjct: 128 tatttgttcttggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaac 187 Query: 280 actttggattcacccatcttagtgctggagatcttttgcgcgcggagattaaatctggct 339 | | ||| | ||| ||||| ||||||||||||||| | | || ||||||||||| || | Sbjct: 188 attatggttacacacatctgagtgctggagatcttcttagagctgagattaaatcaggtt 247 Query: 340 ctgagaatggaactatgattgagaacatgataaaggagggaaagattgttccatcggagg 399 |||| |||||||||||||| |||| ||||| || ||||| |||||||| || || |||| Sbjct: 248 ctgaaaatggaactatgatccagaatatgattaaagaggggaagattgtaccttctgagg 307 Query: 400 tgactataaagct 412 | ||||| ||||| Sbjct: 308 ttactatcaagct 320
>ref|NM_180537.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase AT5G26667 transcript variant AT5G26667.2 mRNA, complete cds Length = 892 Score = 121 bits (61), Expect = 3e-24 Identities = 160/193 (82%) Strand = Plus / Plus Query: 220 tatttgttcttggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaac 279 ||||||||||||||||||| ||||||||||| || || |||||||| | ||||| |||| Sbjct: 128 tatttgttcttggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaac 187 Query: 280 actttggattcacccatcttagtgctggagatcttttgcgcgcggagattaaatctggct 339 | | ||| | ||| ||||| ||||||||||||||| | | || ||||||||||| || | Sbjct: 188 attatggttacacacatctgagtgctggagatcttcttagagctgagattaaatcaggtt 247 Query: 340 ctgagaatggaactatgattgagaacatgataaaggagggaaagattgttccatcggagg 399 |||| |||||||||||||| |||| ||||| || ||||| |||||||| || || |||| Sbjct: 248 ctgaaaatggaactatgatccagaatatgattaaagaggggaagattgtaccttctgagg 307 Query: 400 tgactataaagct 412 | ||||| ||||| Sbjct: 308 ttactatcaagct 320
>ref|NM_001036865.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase AT5G26667 transcript variant AT5G26667.3 mRNA, complete cds Length = 1059 Score = 121 bits (61), Expect = 3e-24 Identities = 160/193 (82%) Strand = Plus / Plus Query: 220 tatttgttcttggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaac 279 ||||||||||||||||||| ||||||||||| || || |||||||| | ||||| |||| Sbjct: 188 tatttgttcttggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaac 247 Query: 280 actttggattcacccatcttagtgctggagatcttttgcgcgcggagattaaatctggct 339 | | ||| | ||| ||||| ||||||||||||||| | | || ||||||||||| || | Sbjct: 248 attatggttacacacatctgagtgctggagatcttcttagagctgagattaaatcaggtt 307 Query: 340 ctgagaatggaactatgattgagaacatgataaaggagggaaagattgttccatcggagg 399 |||| |||||||||||||| |||| ||||| || ||||| |||||||| || || |||| Sbjct: 308 ctgaaaatggaactatgatccagaatatgattaaagaggggaagattgtaccttctgagg 367 Query: 400 tgactataaagct 412 | ||||| ||||| Sbjct: 368 ttactatcaagct 380
>gb|AF000147.1|ATAF000147 Arabidopsis thaliana UMP/CMP kinase (pyr6) mRNA, complete cds Length = 895 Score = 121 bits (61), Expect = 3e-24 Identities = 160/193 (82%) Strand = Plus / Plus Query: 220 tatttgttcttggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaac 279 ||||||||||||||||||| ||||||||||| || || |||||||| | ||||| |||| Sbjct: 110 tatttgttcttggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaac 169 Query: 280 actttggattcacccatcttagtgctggagatcttttgcgcgcggagattaaatctggct 339 | | ||| | ||| ||||| ||||||||||||||| | | || ||||||||||| || | Sbjct: 170 attatggttacacacatctgagtgctggagatcttcttagagctgagattaaatcaggtt 229 Query: 340 ctgagaatggaactatgattgagaacatgataaaggagggaaagattgttccatcggagg 399 |||| |||||||||||||| |||| ||||| || ||||| |||||||| || || |||| Sbjct: 230 ctgaaaatggaactatgatccagaatatgattaaagaggggaagattgtaccttctgagg 289 Query: 400 tgactataaagct 412 | ||||| ||||| Sbjct: 290 ttactatcaagct 302
>dbj|AK106691.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-C08, full insert sequence Length = 1595 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Plus Query: 185 tgagaacatgttgggtgactagaaagtcacagtagtatttgttcttggtggtcctggaag 244 ||||||||||||||||| | ||||||| | | | |||||||||| |||||||||||||| Sbjct: 198 tgagaacatgttgggtggcaagaaagttaaaattatatttgttctaggtggtcctggaag 257 Query: 245 tggaaagggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgc 304 |||||| || || ||||| ||| ||||| || || ||||| || | ||||||||| || Sbjct: 258 tggaaaaggaactcagtgcagcaatattgtagagcattttggttttatccatcttagcgc 317 Query: 305 tggagatcttttgcgcgcggagattaaatctggctctgagaatggaactatgattga 361 ||| || || ||||| || || || || ||||| || ||||| ||||| |||||||| Sbjct: 318 tggtgaactcttgcgtgcagaaatcaattctggttcagagaacggaaccatgattga 374
>gb|DQ430579.1| Sorghum propinquum locus S02089 genomic sequence Length = 737 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430578.1| Sorghum bicolor voucher PI585454 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430577.1| Sorghum bicolor voucher PI267539 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430576.1| Sorghum bicolor voucher PI267408 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430575.1| Sorghum bicolor voucher PI221607 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430574.1| Sorghum bicolor voucher PI152702 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430573.1| Sorghum bicolor voucher NSL87902b locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430572.1| Sorghum bicolor voucher NSL87902a locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430571.1| Sorghum bicolor voucher NSL87666 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430570.1| Sorghum bicolor voucher NSL77217 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430569.1| Sorghum bicolor voucher NSL77034 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430568.1| Sorghum bicolor voucher NSL56174 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430567.1| Sorghum bicolor voucher NSL56003 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430566.1| Sorghum bicolor voucher NSL55243 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430565.1| Sorghum bicolor voucher NSL51365 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430564.1| Sorghum bicolor voucher NSL51030 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430563.1| Sorghum bicolor voucher NSL50875 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|DQ430562.1| Sorghum bicolor voucher BTx623 locus S02089 genomic sequence Length = 725 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 510 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 569 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 570 cttttggg 577 || ||||| Sbjct: 166 ctcttggg 173
>gb|AC137518.1| Genomic sequence for Arabidopsis thaliana, clone T7I7, from chromosome 5, complete sequence Length = 22832 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||| ||||||||||| || || |||||||| | ||||| ||||| | ||| | | Sbjct: 10856 ggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaacattatggttac 10915 Query: 291 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatgg 349 || ||||| ||||||||||||||| | | || ||||||||||| || ||||| ||||| Sbjct: 10916 acacatctgagtgctggagatcttcttagagctgagattaaatcaggttctgaaaatgg 10974
>gb|AF086603.1|AF086603 Ceratopteris richardii adenylate kinase (ADK1) mRNA, complete cds Length = 1104 Score = 60.0 bits (30), Expect = 8e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 215 agtagtatttgttcttggtggtcctggaagtggaaagggcacacagtgtgccaacattgt 274 |||||| ||||||||||| || ||||| ||||| |||||||| |||||||| ||||| Sbjct: 259 agtagtttttgttcttgggggacctggcagtggtaagggcacccagtgtgcatctattgt 318 Query: 275 ggaacactttggattcacccatcttagtgctggagatcttttgcgcgcggagat 328 ||| || |||| ||| || ||||| ||||| || || |||||||| || ||||| Sbjct: 319 ggagcaatttgcatttacacatctgagtgcaggggaccttttgcgtgctgagat 372 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 468 ccaaggaatgaagagaatcgtgc 490 ||||||||||||||||||||||| Sbjct: 512 ccaaggaatgaagagaatcgtgc 534
>ref|NM_180395.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase AT3G60180 transcript variant AT3G60180.2 mRNA, complete cds Length = 696 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 122 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 181 Query: 291 acccatcttagtgctggagatctt 314 |||||| |||||||||| |||||| Sbjct: 182 acccattttagtgctggtgatctt 205
>ref|NM_115881.2| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase AT3G60180 transcript variant AT3G60180.1 mRNA, complete cds Length = 844 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 122 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 181 Query: 291 acccatcttagtgctggagatctt 314 |||||| |||||||||| |||||| Sbjct: 182 acccattttagtgctggtgatctt 205
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5 Length = 88548 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 18757 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 18698 Query: 291 acccatcttagtgctggagatctt 314 |||||| |||||||||| |||||| Sbjct: 18697 acccattttagtgctggtgatctt 18674
>emb|AL138658.1|ATT2O9 Arabidopsis thaliana DNA chromosome 3, BAC clone T2O9 Length = 90823 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 81194 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 81135 Query: 291 acccatcttagtgctggagatctt 314 |||||| |||||||||| |||||| Sbjct: 81134 acccattttagtgctggtgatctt 81111
>gb|AY114727.1| Arabidopsis thaliana uridylate kinase-like protein (At3g60180) mRNA, complete cds Length = 655 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 82 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 141 Query: 291 acccatcttagtgctggagatctt 314 |||||| |||||||||| |||||| Sbjct: 142 acccattttagtgctggtgatctt 165
>gb|AY072358.1| Arabidopsis thaliana uridylate kinase-like protein (At3g60180) mRNA, complete cds Length = 843 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 121 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 180 Query: 291 acccatcttagtgctggagatctt 314 |||||| |||||||||| |||||| Sbjct: 181 acccattttagtgctggtgatctt 204
>gb|AY085667.1| Arabidopsis thaliana clone 16800 mRNA, complete sequence Length = 828 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 122 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 181 Query: 291 acccatcttagtgctggagatctt 314 |||||| |||||||||| |||||| Sbjct: 182 acccattttagtgctggtgatctt 205
>ref|XM_811305.1| Trypanosoma cruzi strain CL Brener RuvB-like DNA helicase (Tc00.1047053510877.60) partial mRNA Length = 1425 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 atgataaaggagggaaagattg 387 |||||||||||||||||||||| Sbjct: 178 atgataaaggagggaaagattg 199
>dbj|AB224027.1| Aspergillus oryzae cDNA, contig sequence: AoEST0868 Length = 617 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 208 aagtcacagtagtatttgttcttggtggtcctggaagtggaaaggg 253 |||||||||| || || ||||||||||||| |||||||| ||||| Sbjct: 380 aagtcacagttgttttccttcttggtggtcccggaagtggcaaggg 425
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 208 aagtcacagtagtatttgttcttggtggtcctggaagtggaaaggg 253 |||||||||| || || ||||||||||||| |||||||| ||||| Sbjct: 2225345 aagtcacagttgttttccttcttggtggtcccggaagtggcaaggg 2225390
>ref|XM_845499.1| PREDICTED: Canis familiaris similar to gene model 631, (NCBI) (predicted) (LOC608471), mRNA Length = 1726 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 agaacatgataaaggagggaa 381 ||||||||||||||||||||| Sbjct: 1692 agaacatgataaaggagggaa 1672
>gb|AC133139.23| Medicago truncatula clone mth1-8d23, complete sequence Length = 121016 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Minus Query: 237 cctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcacccat 296 ||||| |||||||| || ||||| ||||| | ||||| ||| |||||||| | ||| Sbjct: 16813 cctggtagtggaaaaggtacacaatgtgcaagaattgttgaaacatttggatttaagcat 16754 Query: 297 cttagtgctggagatcttttg 317 || |||||||||||||||||| Sbjct: 16753 ctgagtgctggagatcttttg 16733
>gb|AC122727.24| Medicago truncatula clone mth2-13b8, complete sequence Length = 128564 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 237 cctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcacccat 296 ||||| |||||||| || ||||| ||||| | ||||| ||| |||||||| | ||| Sbjct: 111752 cctggtagtggaaaaggtacacaatgtgcaagaattgttgaaacatttggatttaagcat 111811 Query: 297 cttagtgctggagatcttttg 317 || |||||||||||||||||| Sbjct: 111812 ctgagtgctggagatcttttg 111832
>ref|XM_788037.1| PREDICTED: Strongylocentrotus purpuratus similar to adenylate kinase 5 isoform 1 (LOC588348), mRNA Length = 2571 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 237 cctggaagtggaaagggcacacagtgtgc 265 ||||| |||||||||||||| |||||||| Sbjct: 382 cctggcagtggaaagggcacgcagtgtgc 410
>ref|XM_967357.1| PREDICTED: Tribolium castaneum similar to CG8714-PA (LOC661178), mRNA Length = 1533 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 gtgactgagaaggaggtggtt 182 ||||||||||||||||||||| Sbjct: 1510 gtgactgagaaggaggtggtt 1530
>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145 biosynthetic gene cluster, complete sequence Length = 126933 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 30 accacgcgccctcccgccccgtgatcgccgccg 62 |||| ||||||| ||||| |||||||||||||| Sbjct: 16392 accaggcgcccttccgccgcgtgatcgccgccg 16424
>emb|CR759739.2| Human DNA sequence from clone XX-NCIH2171_18I22, complete sequence Length = 252905 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ttgttcttggtggtcctggaa 243 ||||||||||||||||||||| Sbjct: 1508 ttgttcttggtggtcctggaa 1488
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 accaccaccgcagcacgcacc 32 ||||||||||||||||||||| Sbjct: 437499 accaccaccgcagcacgcacc 437479
>gb|AF503335.1| Mus musculus strain 129/Sv gamma casein gene, complete cds Length = 30958 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 tgattgagaacatgataaagg 375 ||||||||||||||||||||| Sbjct: 13298 tgattgagaacatgataaagg 13278
>gb|AC006576.15| Homo sapiens Chromosome 12p13.3 BAC Clone 762c12, complete sequence Length = 116840 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ttgttcttggtggtcctggaa 243 ||||||||||||||||||||| Sbjct: 99121 ttgttcttggtggtcctggaa 99101
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| || || ||||| ||| ||||| || || ||||| || Sbjct: 5233542 ggtggtcctggaagtggaaaaggaactcagtgcagcaatattgtagagcattttggtttt 5233601 Query: 291 acccatcttagtgctgg 307 | ||||||||| ||||| Sbjct: 5233602 atccatcttagcgctgg 5233618
>gb|AC074046.9|AC074046 Mus musculus 5 BAC RP23-440C1 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 182534 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 tgattgagaacatgataaagg 375 ||||||||||||||||||||| Sbjct: 71548 tgattgagaacatgataaagg 71568
>gb|AC005846.1| Homo sapiens 12 PAC RPCI3-467F14 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 111904 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 ttgttcttggtggtcctggaa 243 ||||||||||||||||||||| Sbjct: 58161 ttgttcttggtggtcctggaa 58181
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 231 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 290 |||||||||||||||||||| || || ||||| ||| ||||| || || ||||| || Sbjct: 100264 ggtggtcctggaagtggaaaaggaactcagtgcagcaatattgtagagcattttggtttt 100323 Query: 291 acccatcttagtgctgg 307 | ||||||||| ||||| Sbjct: 100324 atccatcttagcgctgg 100340
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 accaccaccgcagcacgcacc 32 ||||||||||||||||||||| Sbjct: 449577 accaccaccgcagcacgcacc 449557
>gb|AC165433.5| Mus musculus chromosome 5, clone RP23-442L7, complete sequence Length = 202557 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gagaaggaggtggttgctga 187 |||||||||||||||||||| Sbjct: 162240 gagaaggaggtggttgctga 162221
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ccgccccgtgatcgccgccg 62 |||||||||||||||||||| Sbjct: 885109 ccgccccgtgatcgccgccg 885090 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gatcgccgccgtctcgccgc 71 |||||||||||||||||||| Sbjct: 843407 gatcgccgccgtctcgccgc 843388
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ccgccccgtgatcgccgccg 62 |||||||||||||||||||| Sbjct: 1901761 ccgccccgtgatcgccgccg 1901742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gatcgccgccgtctcgccgc 71 |||||||||||||||||||| Sbjct: 1859860 gatcgccgccgtctcgccgc 1859841
>gb|AF165424.6| Homo sapiens chromosome 8 clone CTB-402F2 map q21.3, complete sequence Length = 111736 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 agccatgataaagaatgaga 441 |||||||||||||||||||| Sbjct: 24137 agccatgataaagaatgaga 24118
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cgcagcacgcaccacgcgcc 39 |||||||||||||||||||| Sbjct: 11915861 cgcagcacgcaccacgcgcc 11915842
>gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosome 8, complete sequence Length = 212579 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gcagctgtgactgagaagga 175 |||||||||||||||||||| Sbjct: 59511 gcagctgtgactgagaagga 59530
>gb|AC127349.3| Mus musculus BAC clone RP23-62M5 from chromosome 13, complete sequence Length = 193255 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tgttgggtgactagaaagtc 212 |||||||||||||||||||| Sbjct: 66686 tgttgggtgactagaaagtc 66705
>gb|AC016946.15| Homo sapiens 3 BAC RP11-268F24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161123 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tggaacactttggattcacc 293 |||||||||||||||||||| Sbjct: 137460 tggaacactttggattcacc 137479
>gb|AC122438.2| Mus musculus BAC clone RP24-216M6 from 5, complete sequence Length = 193659 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gagaaggaggtggttgctga 187 |||||||||||||||||||| Sbjct: 108421 gagaaggaggtggttgctga 108440
>ref|XM_760066.1| Theileria parva strain Muguga hypothetical protein (TP02_0593) partial mRNA Length = 3249 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 cagtagtatttgttcttggtggtc 237 |||| ||||||||||||||||||| Sbjct: 124 cagtggtatttgttcttggtggtc 147
>emb|AL359816.16| Human DNA sequence from clone RP11-37P5 on chromosome 10 Contains a ferritin light polypeptide (FTL) pseudogene, complete sequence Length = 102101 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 agccatgataaagaatgaga 441 |||||||||||||||||||| Sbjct: 56482 agccatgataaagaatgaga 56501
>gb|AC115283.3| Homo sapiens chromosome 3 clone RP11-632K8, complete sequence Length = 193486 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 attaaatctggctctgagaa 346 |||||||||||||||||||| Sbjct: 123270 attaaatctggctctgagaa 123251
>emb|AL136531.16| Human DNA sequence from clone RP11-314N13 on chromosome 20 Contains the SNPH gene for syntaphilin, the 3' end of the RAD21L1 gene for RAD21-like 1 (S. pombe), the SDCBP2 gene for syndecan binding protein (syntenin) 2, a novel gene, the 5' end of a novel gene, the 3' end of the FKBP1A gene for FK506 binding protein 1A (12kDa) and three CpG islands, complete sequence Length = 119072 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 gaagagatggaaagacgtct 571 |||||||||||||||||||| Sbjct: 75989 gaagagatggaaagacgtct 76008
>emb|AL023553.5|HS347H13 Human DNA sequence from clone RP3-347H13 on chromosome 22 Contains the 3' end of the ACO2 gene for mitochondrial aconitase 2, the gene for a novel protein similar to yeast DNA-directed RNA Polymerase III 25 kD Polypeptide, the gene for the human ortholog of rat Pippin, the PMM1 gene for phosphomannomutase 1 (PMMH-22, yeast SEC53 ortholog), and two novel genes. Contains ESTs, STSs, GSSs and two putative CpG islands, complete sequence Length = 107818 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 aagccatgataaagaatgagaatg 444 ||||||||| |||||||||||||| Sbjct: 53757 aagccatgaaaaagaatgagaatg 53780
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gatcgccgccgtctcgccgc 71 |||||||||||||||||||| Sbjct: 2505042 gatcgccgccgtctcgccgc 2505061 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ccgccccgtgatcgccgccg 62 |||||||||||||||||||| Sbjct: 2463144 ccgccccgtgatcgccgccg 2463163
>emb|AL833433.1|HSM804746 Homo sapiens genomic DNA; cDNA DKFZp313O2039 (from clone DKFZp313O2039) Length = 2086 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 gaagagatggaaagacgtct 571 |||||||||||||||||||| Sbjct: 204 gaagagatggaaagacgtct 185
>gb|DQ068068.1| Uncultured bacterium BAC17H8, complete sequence Length = 135294 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gtgatcgccgccgtctcgcc 69 |||||||||||||||||||| Sbjct: 8658 gtgatcgccgccgtctcgcc 8677
>gb|AC084128.6| Homo sapiens chromosome 8, clone CTD-3118D11, complete sequence Length = 129240 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 agccatgataaagaatgaga 441 |||||||||||||||||||| Sbjct: 116458 agccatgataaagaatgaga 116439
>gb|AC103760.2| Homo sapiens chromosome 8, clone CTD-2284J15, complete sequence Length = 112655 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 agccatgataaagaatgaga 441 |||||||||||||||||||| Sbjct: 99088 agccatgataaagaatgaga 99107
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 cagcccgtccggcggcgcggagcc 131 ||||||||| |||||||||||||| Sbjct: 4483463 cagcccgtcaggcggcgcggagcc 4483440
>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, complete sequence Length = 152272 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 ccgtgatcgccgccgtctcgccgc 71 |||||| ||||||||||||||||| Sbjct: 117478 ccgtgaccgccgccgtctcgccgc 117501
>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, sequencing in progress, complete sequence Length = 152272 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 ccgtgatcgccgccgtctcgccgc 71 |||||| ||||||||||||||||| Sbjct: 117478 ccgtgaccgccgccgtctcgccgc 117501
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 ccgtgatcgccgccgtctcgccgc 71 |||||| ||||||||||||||||| Sbjct: 21115163 ccgtgaccgccgccgtctcgccgc 21115186
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cgcagcacgcaccacgcgcc 39 |||||||||||||||||||| Sbjct: 11912624 cgcagcacgcaccacgcgcc 11912605
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tatgattgagaacatgataa 372 |||||||||||||||||||| Sbjct: 19269361 tatgattgagaacatgataa 19269342
>gb|AC068724.7|AC068724 Homo sapiens chromosome 15 clone RP11-473C18 map 15q15, complete sequence Length = 190727 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 accacagaccaccaccgcagcacg 28 |||||||||||||||| ||||||| Sbjct: 73942 accacagaccaccaccacagcacg 73919
>dbj|AB029073.2| Mus musculus Kkm gene for Ser/Thr kinase KKIAMRE, complete cds Length = 30852 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gagaaggaggtggttgctga 187 |||||||||||||||||||| Sbjct: 10938 gagaaggaggtggttgctga 10957
>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1619_F12 Length = 133028 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tatgattgagaacatgataa 372 |||||||||||||||||||| Sbjct: 88982 tatgattgagaacatgataa 88963
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cgccgacccctccaccggca 93 |||||||||||||||||||| Sbjct: 757144 cgccgacccctccaccggca 757163
>gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2, complete sequence Length = 189949 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 tttccaaggaatgaagagaa 484 |||||||||||||||||||| Sbjct: 160684 tttccaaggaatgaagagaa 160665
>gb|AC006499.13|AC006499 Homo sapiens chromosome 4 clone C0494H11, complete sequence Length = 195384 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tagtatttgttcttggtggt 236 |||||||||||||||||||| Sbjct: 137608 tagtatttgttcttggtggt 137627
>gb|AC155176.6| Mus musculus 10 BAC RP24-219F17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186725 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 aaagaatgagaatgataagt 450 |||||||||||||||||||| Sbjct: 7141 aaagaatgagaatgataagt 7122
>gb|AC005922.1|AC005922 Homo sapiens chromosome 17, clone hRPK.235_I_10, complete sequence Length = 140677 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 agtcacagtagtatttgttc 228 |||||||||||||||||||| Sbjct: 3948 agtcacagtagtatttgttc 3967
>gb|AC153830.5| Mus musculus 10 BAC RP23-299H19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200647 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 aaagaatgagaatgataagt 450 |||||||||||||||||||| Sbjct: 170340 aaagaatgagaatgataagt 170321
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 ccgtgatcgccgccgtctcgccgc 71 |||||| ||||||||||||||||| Sbjct: 21425404 ccgtgaccgccgccgtctcgccgc 21425427
>gb|AC140844.3| Mus musculus BAC clone RP24-361P18 from 13, complete sequence Length = 132297 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tgttgggtgactagaaagtc 212 |||||||||||||||||||| Sbjct: 107834 tgttgggtgactagaaagtc 107853
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 gtctcgccgctgcgccgacccctc 85 ||||||||||||||||| |||||| Sbjct: 2708558 gtctcgccgctgcgccggcccctc 2708581
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cgcagcacgcaccacgcgcc 39 |||||||||||||||||||| Sbjct: 17123 cgcagcacgcaccacgcgcc 17104 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,186,874 Number of Sequences: 3902068 Number of extensions: 5186874 Number of successful extensions: 108741 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107793 Number of HSP's gapped (non-prelim): 947 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
