ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart13d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470697.1| Oryza sativa (japonica cultivar-group), mRNA 111 3e-21
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 111 3e-21
3gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genom... 111 3e-21
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
5dbj|AK120709.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 3e-21
6dbj|AK110542.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 3e-21
7gb|AC124502.4| Mus musculus BAC clone RP23-414G6 from chromosome... 46 0.13
8ref|NM_145495.1| Mus musculus Ras and Rab interactor 1 (Rin1), mRNA 46 0.13
9gb|BC011277.1| Mus musculus Ras and Rab interactor 1, mRNA (cDNA... 46 0.13
10ref|NM_193035.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
11emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 42 2.0
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
13dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
14dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
15dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
16dbj|AK066185.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
17dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
18ref|XM_470558.1| Oryza sativa (japonica cultivar-group), predic... 40 8.1
19gb|AC183962.3| Pan troglodytes BAC clone CH251-711F5 from chromo... 40 8.1
20ref|XM_606734.2| PREDICTED: Bos taurus similar to SH3 multiple d... 40 8.1
21gb|AC161276.2| Pan troglodytes BAC clone CH251-520C21 from chrom... 40 8.1
22gb|AC145377.2| Pan troglodytes BAC clone RP43-11P19 from 7, comp... 40 8.1
23gb|AF252832.4| Homo sapiens chromosome 8 clone CTD-2017E4 map ce... 40 8.1
24gb|AC084163.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.1
25gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete s... 40 8.1
26gb|AC006043.1| Homo sapiens BAC clone RP11-538D15 from 7, comple... 40 8.1
27gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CI... 40 8.1
28gb|AC107024.5| Homo sapiens 3 BAC RP11-447J13 (Roswell Park Canc... 40 8.1
29gb|AC126249.4| Mus musculus BAC clone RP23-412I9 from chromosome... 40 8.1
30gb|AC093743.2| Homo sapiens BAC clone RP11-24N19 from 7, complet... 40 8.1
31gb|AC145518.1| Pan troglodytes BAC clone RP43-21J10 from 7, comp... 40 8.1
32emb|BX546470.1| Human DNA sequence from clone WI2-88884H1 on chr... 40 8.1
33emb|Z81009.1|HS473J10 Human DNA sequence from clone RP3-473J10 o... 40 8.1
34emb|AL590227.13| Human DNA sequence from clone RP11-343D24 on ch... 40 8.1
35emb|AL590684.12| Human DNA sequence from clone RP11-168K19 on ch... 40 8.1
36ref|XM_499677.1| Yarrowia lipolytica CLIB122, YALI0A02134g predi... 40 8.1
37emb|AL445306.7| Human DNA sequence from clone RP11-62C22 on chro... 40 8.1
38emb|AL365222.24| Human DNA sequence from clone RP11-274E6 on chr... 40 8.1
39emb|AL365364.19| Human DNA sequence from clone RP11-624L12 on ch... 40 8.1
40emb|AL365184.12| Human DNA sequence from clone RP11-80B9 on chro... 40 8.1
41emb|AL359675.10| Human DNA sequence from clone RP11-767J14 on ch... 40 8.1
42emb|AL359077.10| Human DNA sequence from clone RP11-176B4 on chr... 40 8.1
43emb|AL161659.17| Human DNA sequence from clone RP11-526K24 on ch... 40 8.1
44gb|AC129471.1| Homo sapiens chromosome 5 clone RP11-352J21, comp... 40 8.1
45emb|AL121592.14|HSJ765D23 Human DNA sequence from clone RP4-765D... 40 8.1
46gb|AC099679.3| Homo sapiens chromosome 1 clone RP4-683M8, comple... 40 8.1
47gb|AC104150.6| Homo sapiens 3q BAC RP11-523G9 (Roswell Park Canc... 40 8.1
48gb|AC096541.2| Homo sapiens chromosome 1 clone RP11-330M19, comp... 40 8.1
49dbj|AB226251.1| Aspergillus oryzae cDNA, contig sequence: AoEST3110 40 8.1
50gb|AC099805.2| Homo sapiens chromosome 8, clone RP11-1102P16, co... 40 8.1
51dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 40 8.1
52gb|AC023796.22| Homo sapiens 12p BAC RP11-625L16 (Roswell Park C... 40 8.1
53gb|AC104640.3| Homo sapiens 3 BAC RP11-809F4 (Roswell Park Cance... 40 8.1
54gb|AC021427.10| Homo sapiens chromosome 11, clone RP11-399N15, c... 40 8.1
55gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, comple... 40 8.1
56gb|AC025538.6| Homo sapiens BAC clone RP11-274J2 from 4, complet... 40 8.1
57gb|AC008512.8| Homo sapiens chromosome 5 clone CTC-454K8, comple... 40 8.1
58gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, com... 40 8.1
59gb|AC016617.6| Homo sapiens chromosome 5 clone CTD-2239O16, comp... 40 8.1
60gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon... 40 8.1
61gb|AC073643.3| Homo sapiens BAC clone RP11-448J8 from 2, complet... 40 8.1
62gb|AC124290.5| Homo sapiens chromosome 8, clone RP11-89M20, comp... 40 8.1
63gb|AC124265.7| Homo sapiens chromosome 8, clone CTD-2017E4, comp... 40 8.1
64gb|AC008580.7| Homo sapiens chromosome 5 clone CTC-564J15, compl... 40 8.1
65gb|AC137549.1| Homo sapiens chromosome 5 clone RP11-159K7, compl... 40 8.1
66dbj|AK101949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
67dbj|AK060929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
68dbj|AK060527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
69dbj|AP001992.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.1
70dbj|AP006252.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 8.1
71gb|AC005760.1|AC005760 Homo sapiens chromosome 19, cosmid R31118... 40 8.1
72emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 8.1
73dbj|AP000083.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 8.1 
>ref|XM_470697.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                       
Query: 434 agcacatggccgagttccgggaggaggccctgctctgggtcgccaccaacgtggcgccgt 493
           |||||||||||||||||| ||||||||||  ||||||||||||| ||||||| |||| ||
Sbjct: 254 agcacatggccgagttcccggaggaggccgagctctgggtcgccgccaacgtcgcgcggt 313

                                       
Query: 494 tcctcccggcgaccatgatcacgcacgt 521
           ||||||||||||| | ||||||||||||
Sbjct: 314 tcctcccggcgacgaggatcacgcacgt 341
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                            
Query: 434      agcacatggccgagttccgggaggaggccctgctctgggtcgccaccaacgtggcgccgt 493
                |||||||||||||||||| ||||||||||  ||||||||||||| ||||||| |||| ||
Sbjct: 14604055 agcacatggccgagttcccggaggaggccgagctctgggtcgccgccaacgtcgcgcggt 14604114

                                            
Query: 494      tcctcccggcgaccatgatcacgcacgt 521
                ||||||||||||| | ||||||||||||
Sbjct: 14604115 tcctcccggcgacgaggatcacgcacgt 14604142



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     ttcttggagccggccggcca 135
               ||||||||||||||||||||
Sbjct: 4332003 ttcttggagccggccggcca 4332022
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>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete
             sequence
          Length = 147130

 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                         
Query: 434   agcacatggccgagttccgggaggaggccctgctctgggtcgccaccaacgtggcgccgt 493
             |||||||||||||||||| ||||||||||  ||||||||||||| ||||||| |||| ||
Sbjct: 53656 agcacatggccgagttcccggaggaggccgagctctgggtcgccgccaacgtcgcgcggt 53597

                                         
Query: 494   tcctcccggcgaccatgatcacgcacgt 521
             ||||||||||||| | ||||||||||||
Sbjct: 53596 tcctcccggcgacgaggatcacgcacgt 53569
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                            
Query: 434      agcacatggccgagttccgggaggaggccctgctctgggtcgccaccaacgtggcgccgt 493
                |||||||||||||||||| ||||||||||  ||||||||||||| ||||||| |||| ||
Sbjct: 14599030 agcacatggccgagttcccggaggaggccgagctctgggtcgccgccaacgtcgcgcggt 14599089

                                            
Query: 494      tcctcccggcgaccatgatcacgcacgt 521
                ||||||||||||| | ||||||||||||
Sbjct: 14599090 tcctcccggcgacgaggatcacgcacgt 14599117



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     ttcttggagccggccggcca 135
               ||||||||||||||||||||
Sbjct: 4332118 ttcttggagccggccggcca 4332137
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>dbj|AK120709.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F15, full
           insert sequence
          Length = 1976

 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                       
Query: 434 agcacatggccgagttccgggaggaggccctgctctgggtcgccaccaacgtggcgccgt 493
           |||||||||||||||||| ||||||||||  ||||||||||||| ||||||| |||| ||
Sbjct: 510 agcacatggccgagttcccggaggaggccgagctctgggtcgccgccaacgtcgcgcggt 569

                                       
Query: 494 tcctcccggcgaccatgatcacgcacgt 521
           ||||||||||||| | ||||||||||||
Sbjct: 570 tcctcccggcgacgaggatcacgcacgt 597
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>dbj|AK110542.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B04, full
           insert sequence
          Length = 1467

 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                       
Query: 434 agcacatggccgagttccgggaggaggccctgctctgggtcgccaccaacgtggcgccgt 493
           |||||||||||||||||| ||||||||||  ||||||||||||| ||||||| |||| ||
Sbjct: 109 agcacatggccgagttcccggaggaggccgagctctgggtcgccgccaacgtcgcgcggt 168

                                       
Query: 494 tcctcccggcgaccatgatcacgcacgt 521
           ||||||||||||| | ||||||||||||
Sbjct: 169 tcctcccggcgacgaggatcacgcacgt 196
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>gb|AC124502.4| Mus musculus BAC clone RP23-414G6 from chromosome 19, complete sequence
          Length = 219212

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 155   ctcagctcaggcaggagaaagaa 177
             |||||||||||||||||||||||
Sbjct: 67805 ctcagctcaggcaggagaaagaa 67783
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>ref|NM_145495.1| Mus musculus Ras and Rab interactor 1 (Rin1), mRNA
          Length = 4216

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 155  ctcagctcaggcaggagaaagaa 177
            |||||||||||||||||||||||
Sbjct: 2888 ctcagctcaggcaggagaaagaa 2910
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>gb|BC011277.1| Mus musculus Ras and Rab interactor 1, mRNA (cDNA clone MGC:12160
            IMAGE:3711198), complete cds
          Length = 4216

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 155  ctcagctcaggcaggagaaagaa 177
            |||||||||||||||||||||||
Sbjct: 2888 ctcagctcaggcaggagaaagaa 2910
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>ref|NM_193035.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1422

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 473  tcgccaccaacgtggcgccgt 493
            |||||||||||||||||||||
Sbjct: 1061 tcgccaccaacgtggcgccgt 1081
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>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 567    cgccgcctactcgctggtccc 587
              |||||||||||||||||||||
Sbjct: 110437 cgccgcctactcgctggtccc 110417
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 487      gcgccgttcctcccggcgaccatgatcacgcac 519
                |||| ||||||||||||||| | ||||||||||
Sbjct: 15691788 gcgcggttcctcccggcgactaggatcacgcac 15691756
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 473      tcgccaccaacgtggcgccgt 493
                |||||||||||||||||||||
Sbjct: 25913000 tcgccaccaacgtggcgccgt 25912980
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>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0404D10
          Length = 155069

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 487  gcgccgttcctcccggcgaccatgatcacgcac 519
            |||| ||||||||||||||| | ||||||||||
Sbjct: 6244 gcgcggttcctcccggcgactaggatcacgcac 6212
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>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0410E11
          Length = 150200

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 487    gcgccgttcctcccggcgaccatgatcacgcac 519
              |||| ||||||||||||||| | ||||||||||
Sbjct: 125943 gcgcggttcctcccggcgactaggatcacgcac 125911
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>dbj|AK066185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056F23, full
           insert sequence
          Length = 1313

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 tcgccaccaacgtggcgccgt 493
           |||||||||||||||||||||
Sbjct: 833 tcgccaccaacgtggcgccgt 853
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>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1339_F05
          Length = 132708

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 473   tcgccaccaacgtggcgccgt 493
             |||||||||||||||||||||
Sbjct: 83448 tcgccaccaacgtggcgccgt 83428
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>ref|XM_470558.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 116 ttcttggagccggccggcca 135
           ||||||||||||||||||||
Sbjct: 107 ttcttggagccggccggcca 88
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>gb|AC183962.3| Pan troglodytes BAC clone CH251-711F5 from chromosome 6, complete
              sequence
          Length = 196547

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    ctcaggcaggagaaagaaat 179
              ||||||||||||||||||||
Sbjct: 107253 ctcaggcaggagaaagaaat 107272
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>ref|XM_606734.2| PREDICTED: Bos taurus similar to SH3 multiple domains 2 (LOC528315),
            mRNA
          Length = 2220

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 441  ggccgagttccgggaggaggccctgctctggg 472
            |||||||| | ||||||||||||||| |||||
Sbjct: 1971 ggccgagtccagggaggaggccctgcgctggg 1940
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>gb|AC161276.2| Pan troglodytes BAC clone CH251-520C21 from chromosome 7, complete
              sequence
          Length = 210088

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    ctcaggcaggagaaagaaat 179
              ||||||||||||||||||||
Sbjct: 161205 ctcaggcaggagaaagaaat 161186
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>gb|AC145377.2| Pan troglodytes BAC clone RP43-11P19 from 7, complete sequence
          Length = 194463

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 64894 tcaggcaggagaaagaaatg 64913
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>gb|AF252832.4| Homo sapiens chromosome 8 clone CTD-2017E4 map cen, complete sequence
          Length = 139288

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ctcaggcaggagaaagaaat 179
             ||||||||||||||||||||
Sbjct: 71349 ctcaggcaggagaaagaaat 71368
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>gb|AC084163.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-287D23, complete
              sequence
          Length = 214292

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    gcaggagaaagaaatgttgc 184
              ||||||||||||||||||||
Sbjct: 131115 gcaggagaaagaaatgttgc 131134
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>gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete sequence
          Length = 75970

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    ccaggagaagcaagcaagct 110
             ||||||||||||||||||||
Sbjct: 34605 ccaggagaagcaagcaagct 34624
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>gb|AC006043.1| Homo sapiens BAC clone RP11-538D15 from 7, complete sequence
          Length = 189036

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    tcaggcaggagaaagaaatg 180
              ||||||||||||||||||||
Sbjct: 160214 tcaggcaggagaaagaaatg 160233
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>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence
          Length = 213541

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  tcaggcaggagaaagaaatg 180
            ||||||||||||||||||||
Sbjct: 9757 tcaggcaggagaaagaaatg 9776
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>gb|AC107024.5| Homo sapiens 3 BAC RP11-447J13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180216

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 93536 tcaggcaggagaaagaaatg 93517



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 39674 tcaggcaggagaaagaaatg 39655
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>gb|AC126249.4| Mus musculus BAC clone RP23-412I9 from chromosome 15, complete sequence
          Length = 190037

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 92     caggagaagcaagcaagctctagc 115
              ||||||| ||||||||||||||||
Sbjct: 116111 caggagatgcaagcaagctctagc 116088
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>gb|AC093743.2| Homo sapiens BAC clone RP11-24N19 from 7, complete sequence
          Length = 76471

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   tcaggcacttctctggggga 257
             ||||||||||||||||||||
Sbjct: 44039 tcaggcacttctctggggga 44020
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>gb|AC145518.1| Pan troglodytes BAC clone RP43-21J10 from 7, complete sequence
          Length = 178086

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 21437 tcaggcaggagaaagaaatg 21418
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>emb|BX546470.1| Human DNA sequence from clone WI2-88884H1 on chromosome X Contains the
             5' end of a aldo-keto reductase family 1 member B1 (aldose
             reductase) (AKR1B1) pseudogene, complete sequence
          Length = 42449

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 12927 tcaggcaggagaaagaaatg 12908
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>emb|Z81009.1|HS473J10 Human DNA sequence from clone RP3-473J10 on chromosome X, complete
             sequence
          Length = 68842

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 45358 tcaggcaggagaaagaaatg 45377
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>emb|AL590227.13| Human DNA sequence from clone RP11-343D24 on chromosome 6 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
             and a novel gene, complete sequence
          Length = 138027

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ctcaggcaggagaaagaaat 179
             ||||||||||||||||||||
Sbjct: 11134 ctcaggcaggagaaagaaat 11153
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>emb|AL590684.12| Human DNA sequence from clone RP11-168K19 on chromosome 6 Contains the
             5' end of a novel gene, complete sequence
          Length = 24401

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 10604 tcaggcaggagaaagaaatg 10585
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>ref|XM_499677.1| Yarrowia lipolytica CLIB122, YALI0A02134g predicted mRNA
          Length = 4101

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  aagcagaccaagcaggcgca 344
            ||||||||||||||||||||
Sbjct: 3862 aagcagaccaagcaggcgca 3881
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>emb|AL445306.7| Human DNA sequence from clone RP11-62C22 on chromosome X Contains a
             telomeric repeat binding factor (NIMA-interacting) 1
             (TERF1) pseudogene and a novel gene, complete sequence
          Length = 158022

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 38391 tcaggcaggagaaagaaatg 38372
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>emb|AL365222.24| Human DNA sequence from clone RP11-274E6 on chromosome 6, complete
             sequence
          Length = 166244

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 31504 tcaggcaggagaaagaaatg 31523
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>emb|AL365364.19| Human DNA sequence from clone RP11-624L12 on chromosome 10 Contains a
              ribosomal protein L17 (RPL17) pseudogene and the 3'end of
              the FER1L3 gene for fer-1-like 3, myoferlin (C. elegans),
              complete sequence
          Length = 173864

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    gctcaggcaggagaaagaaa 178
              ||||||||||||||||||||
Sbjct: 103488 gctcaggcaggagaaagaaa 103469
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>emb|AL365184.12| Human DNA sequence from clone RP11-80B9 on chromosome 1 Contains two
              novel genes, a protein-kinase interferon-inducible double
              stranded RNA dependent inhibitor repressor of (P58
              repressor) (PRKRIR) pseudogene, a riboflavin kinase (RFK)
              pseudogene and the 3' end of the RGS7 gene for regulator of
              G-protein signalling 7, complete sequence
          Length = 173634

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    ctcaggcaggagaaagaaat 179
              ||||||||||||||||||||
Sbjct: 169702 ctcaggcaggagaaagaaat 169683
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>emb|AL359675.10| Human DNA sequence from clone RP11-767J14 on chromosome 6, complete
             sequence
          Length = 110901

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ctcaggcaggagaaagaaat 179
             ||||||||||||||||||||
Sbjct: 75561 ctcaggcaggagaaagaaat 75542
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>emb|AL359077.10| Human DNA sequence from clone RP11-176B4 on chromosome 9 Contains part of
              a novel protein similar to coactivator-associated arginine
              methyltransferase-1 (CARM1), complete sequence
          Length = 182506

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    tcaggcaggagaaagaaatg 180
              ||||||||||||||||||||
Sbjct: 178944 tcaggcaggagaaagaaatg 178963
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>emb|AL161659.17| Human DNA sequence from clone RP11-526K24 on chromosome 20 Contains a
             novel gene, the 5' end of the C20orf7 gene for chromosome
             20 open reading frame 7 (FLJ22324) and two CpG islands,
             complete sequence
          Length = 101789

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 16082 tcaggcaggagaaagaaatg 16101
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>gb|AC129471.1| Homo sapiens chromosome 5 clone RP11-352J21, complete sequence
          Length = 180334

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ctcaggcaggagaaagaaat 179
             ||||||||||||||||||||
Sbjct: 86564 ctcaggcaggagaaagaaat 86583
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>emb|AL121592.14|HSJ765D23 Human DNA sequence from clone RP4-765D23 on chromosome 20 Contains
            STSs and GSSs, complete sequence
          Length = 30996

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  tcaggcaggagaaagaaatg 180
            ||||||||||||||||||||
Sbjct: 4223 tcaggcaggagaaagaaatg 4204
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>gb|AC099679.3| Homo sapiens chromosome 1 clone RP4-683M8, complete sequence
          Length = 106610

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  tcaggcaggagaaagaaatg 180
            ||||||||||||||||||||
Sbjct: 1102 tcaggcaggagaaagaaatg 1121
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>gb|AC104150.6| Homo sapiens 3q BAC RP11-523G9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160850

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 14603 tcaggcaggagaaagaaatg 14584
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>gb|AC096541.2| Homo sapiens chromosome 1 clone RP11-330M19, complete sequence
          Length = 200368

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    tcaggcaggagaaagaaatg 180
              ||||||||||||||||||||
Sbjct: 196330 tcaggcaggagaaagaaatg 196349
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>dbj|AB226251.1| Aspergillus oryzae cDNA, contig sequence: AoEST3110
          Length = 950

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 453 ggaggaggccctgctctggg 472
           ||||||||||||||||||||
Sbjct: 410 ggaggaggccctgctctggg 391
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>gb|AC099805.2| Homo sapiens chromosome 8, clone RP11-1102P16, complete sequence
          Length = 178448

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    tcaggcaggagaaagaaatg 180
              ||||||||||||||||||||
Sbjct: 105260 tcaggcaggagaaagaaatg 105241
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    ggaggaggccctgctctggg 472
              ||||||||||||||||||||
Sbjct: 522963 ggaggaggccctgctctggg 522944
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>gb|AC023796.22| Homo sapiens 12p BAC RP11-625L16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 173342

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  ctcaggcaggagaaagaaat 179
            ||||||||||||||||||||
Sbjct: 4646 ctcaggcaggagaaagaaat 4627
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>gb|AC104640.3| Homo sapiens 3 BAC RP11-809F4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181345

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    tcaggcaggagaaagaaatg 180
              ||||||||||||||||||||
Sbjct: 168066 tcaggcaggagaaagaaatg 168047
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>gb|AC021427.10| Homo sapiens chromosome 11, clone RP11-399N15, complete sequence
          Length = 174147

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 51215 tcaggcaggagaaagaaatg 51234
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>gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, complete sequence
          Length = 173794

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    ctcaggcaggagaaagaaat 179
              ||||||||||||||||||||
Sbjct: 150906 ctcaggcaggagaaagaaat 150887
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>gb|AC025538.6| Homo sapiens BAC clone RP11-274J2 from 4, complete sequence
          Length = 161478

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 36526 tcaggcaggagaaagaaatg 36545
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>gb|AC008512.8| Homo sapiens chromosome 5 clone CTC-454K8, complete sequence
          Length = 110931

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 15480 tcaggcaggagaaagaaatg 15461
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>gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, complete sequence
          Length = 93288

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 28897 tcaggcaggagaaagaaatg 28916
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>gb|AC016617.6| Homo sapiens chromosome 5 clone CTD-2239O16, complete sequence
          Length = 114972

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ctcaggcaggagaaagaaat 179
             ||||||||||||||||||||
Sbjct: 34318 ctcaggcaggagaaagaaat 34337
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>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   ttcttggagccggccggcca 135
             ||||||||||||||||||||
Sbjct: 94494 ttcttggagccggccggcca 94475
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>gb|AC073643.3| Homo sapiens BAC clone RP11-448J8 from 2, complete sequence
          Length = 44171

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 24910 tcaggcaggagaaagaaatg 24929
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>gb|AC124290.5| Homo sapiens chromosome 8, clone RP11-89M20, complete sequence
          Length = 198642

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    ctcaggcaggagaaagaaat 179
              ||||||||||||||||||||
Sbjct: 162953 ctcaggcaggagaaagaaat 162934
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>gb|AC124265.7| Homo sapiens chromosome 8, clone CTD-2017E4, complete sequence
          Length = 139288

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ctcaggcaggagaaagaaat 179
             ||||||||||||||||||||
Sbjct: 71348 ctcaggcaggagaaagaaat 71367
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>gb|AC008580.7| Homo sapiens chromosome 5 clone CTC-564J15, complete sequence
          Length = 122322

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 87289 tcaggcaggagaaagaaatg 87308
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>gb|AC137549.1| Homo sapiens chromosome 5 clone RP11-159K7, complete sequence
          Length = 138494

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    ctcaggcaggagaaagaaat 179
              ||||||||||||||||||||
Sbjct: 127101 ctcaggcaggagaaagaaat 127120
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>dbj|AK101949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075D23, full
           insert sequence
          Length = 1575

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 116 ttcttggagccggccggcca 135
           ||||||||||||||||||||
Sbjct: 200 ttcttggagccggccggcca 181
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>dbj|AK060929.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-A09, full
           insert sequence
          Length = 1195

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 116 ttcttggagccggccggcca 135
           ||||||||||||||||||||
Sbjct: 173 ttcttggagccggccggcca 154
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>dbj|AK060527.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F02, full
           insert sequence
          Length = 1249

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 116 ttcttggagccggccggcca 135
           ||||||||||||||||||||
Sbjct: 201 ttcttggagccggccggcca 182
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>dbj|AP001992.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-147I3, complete
             sequence
          Length = 169454

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 34528 tcaggcaggagaaagaaatg 34547
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>dbj|AP006252.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-771I6, complete
             sequence
          Length = 153493

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ctcaggcaggagaaagaaat 179
             ||||||||||||||||||||
Sbjct: 35690 ctcaggcaggagaaagaaat 35709
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>gb|AC005760.1|AC005760 Homo sapiens chromosome 19, cosmid R31118, complete sequence
          Length = 39731

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcaggcaggagaaagaaatg 180
             ||||||||||||||||||||
Sbjct: 35039 tcaggcaggagaaagaaatg 35020
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    aagcagaccaagcaggcgca 344
              ||||||||||||||||||||
Sbjct: 263872 aagcagaccaagcaggcgca 263853
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>dbj|AP000083.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 19/19
          Length = 102456

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ctcaggcaggagaaagaaat 179
             ||||||||||||||||||||
Sbjct: 15395 ctcaggcaggagaaagaaat 15376


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,648,240
Number of Sequences: 3902068
Number of extensions: 4648240
Number of successful extensions: 86388
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86058
Number of HSP's gapped (non-prelim): 330
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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