ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart13c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009620.1| Triticum aestivum clone wre1n.pk0126.e11:fis, ful... 535 e-149
2dbj|AK111569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 1e-72
3gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic seque... 149 1e-32
4gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genom... 149 1e-32
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 149 1e-32
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
7gb|AY112561.1| Zea mays CL39582_1 mRNA sequence 139 1e-29
8dbj|AK111837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 6e-16
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
11emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 72 2e-09
12gb|AF475127.1| Triticum aestivum 18S subunit ribosomal protein m... 66 1e-07
13gb|AY112520.1| Zea mays CL889_1 mRNA sequence 52 0.002
14gb|AF453322.1| Brassica oleracea zinc finger protein LSD1 (LSD1)... 48 0.031
15gb|AC161205.3| Mus musculus chromosome 7, clone RP23-53C15, comp... 46 0.12
16gb|BC047471.1| Homo sapiens hypothetical LOC554208, mRNA (cDNA c... 44 0.49
17gb|BC031277.1| Homo sapiens hypothetical LOC554208, mRNA (cDNA c... 44 0.49
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
19dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
20dbj|AK109425.2| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
21dbj|AK098759.1| Homo sapiens cDNA FLJ25893 fis, clone CBR03492 44 0.49
22dbj|AK068813.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
23ref|XM_471505.1| Oryza sativa (japonica cultivar-group), predic... 42 1.9
24ref|XM_414246.1| PREDICTED: Gallus gallus similar to FELE-1 (LOC... 42 1.9
25dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
26gb|AF225314.1|AF225314 Bonasa umbellus clone A3 endogenous ASLV ... 42 1.9
27dbj|AK121455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
28gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 42 1.9
29emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on ch... 42 1.9
30emb|AL606602.2|OSJN00067 Oryza sativa genomic DNA, chromosome 4,... 42 1.9
31ref|XM_514782.1| PREDICTED: Pan troglodytes PPAR-alpha interacti... 40 7.7
32gb|DQ215779.1| Taeniopygia guttata clone 0058P0046G08 mitochondr... 40 7.7
33gb|DQ215778.1| Taeniopygia guttata clone 0058P0035E07 mitochondr... 40 7.7
34gb|DQ215777.1| Taeniopygia guttata clone 0058P0036C01 mitochondr... 40 7.7
35gb|DQ215776.1| Taeniopygia guttata clone 0058P0055C06 mitochondr... 40 7.7
36gb|DQ215775.1| Taeniopygia guttata clone 0058P0037B04 mitochondr... 40 7.7
37gb|DQ215774.1| Taeniopygia guttata clone 0061P0007H09 mitochondr... 40 7.7
38gb|DQ215773.1| Taeniopygia guttata clone 0058P0006E05 mitochondr... 40 7.7
39gb|DQ215772.1| Taeniopygia guttata clone 0058P0044F12 mitochondr... 40 7.7
40ref|XM_479207.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.7
41ref|NM_175332.2| Mus musculus RIKEN cDNA E130012A19 gene (E13001... 40 7.7
42gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence 40 7.7
43gb|AC166357.3| Mus musculus BAC clone RP23-360N1 from chromosome... 40 7.7
44gb|AF238380.3| Homo sapiens chromosome X multiple clones map p11... 40 7.7
45gb|BC055770.1| Mus musculus RIKEN cDNA E130012A19 gene, mRNA (cD... 40 7.7
46gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, com... 40 7.7
47ref|XM_543959.2| PREDICTED: Canis familiaris similar to Lysyl ox... 40 7.7
48gb|BC006054.1| Mus musculus RIKEN cDNA E130012A19 gene, mRNA (cD... 40 7.7
49gb|AC124926.7| Rattus norvegicus X BAC CH230-155H3 (Children's H... 40 7.7
50emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4,... 40 7.7
51emb|AJ289241.1|MMU289241 Mus musculus Capn12 gene for calpain 12... 40 7.7
52gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, co... 40 7.7
53dbj|AB206392.1| Zea mays ZmHK1b1' mRNA for histidine kinase, com... 40 7.7
54dbj|AB206391.1| Zea mays ZmHK1b1 mRNA for histidine kinase, comp... 40 7.7
55gb|AC103809.2| Homo sapiens chromosome 17, clone RP11-647F2, com... 40 7.7
56gb|AC160392.2| Mus musculus BAC clone RP23-240E9 from chromosome... 40 7.7
57dbj|AK029042.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 7.7
58gb|AC090054.2|AC090054 Oryza sativa chromosome 9 clone PAC0645D0... 40 7.7
59dbj|AK087411.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 7.7
60gb|AC000050.22| Homo sapiens Chromosome 22q13 Cosmid Clone n66c4... 40 7.7
61dbj|AK041440.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 7.7
62dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
63dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
64dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
65gb|AE009682.1| Brucella melitensis 16M chromosome II, section 44... 40 7.7
66gb|AC021659.16| Homo sapiens 3 BAC RP11-446K3 (Roswell Park Canc... 40 7.7
67gb|AC100791.15| Homo sapiens chromosome 17, clone RP11-353N14, c... 40 7.7
68gb|AC055863.16| Homo sapiens chromosome 17, clone RP11-478P5, co... 40 7.7
69gb|AF225338.1|AF225338 Dendragapus canadensis clone 5 endogenous... 40 7.7
70gb|AF225337.1|AF225337 Dendragapus canadensis clone 1 endogenous... 40 7.7
71gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 7.7
72dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
73dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
74dbj|AP006727.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
75dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
76dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
77ref|XM_564195.1| Anopheles gambiae str. PEST ENSANGP00000028864 ... 40 7.7
78ref|XM_564194.1| Anopheles gambiae str. PEST ENSANGP00000028392 ... 40 7.7
79dbj|AK105291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
80dbj|AK066454.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
81dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
82emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.7
83emb|AL137779.6|CNS01DWM Human chromosome 14 DNA sequence BAC C-2... 40 7.7
84emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II... 40 7.7
85dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.7
86emb|AL831722.8| Mouse DNA sequence from clone RP23-312D15 on chr... 40 7.7
87emb|AL596123.32| Mouse DNA sequence from clone RP23-94N18 on chr... 40 7.7 
>gb|BT009620.1| Triticum aestivum clone wre1n.pk0126.e11:fis, full insert mRNA
           sequence
          Length = 862

 Score =  535 bits (270), Expect = e-149
 Identities = 297/306 (97%)
 Strand = Plus / Plus

                                                                       
Query: 259 ggtatgcagagccagatcgtgtgccaccgttgccggagggtgctggcctacccgtcaggg 318
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 28  ggtatgcagagccagatcgtgtgtcaccgttgccggagggtgctggcctacccttcaggg 87

                                                                       
Query: 319 gcgcccagcgtgtgctgcgccatgtgccgagccatcaccgccgtgccacccccagcgcca 378
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 88  gcgcccagcgtgtgctgcgccatgtgccgggccatcaccgccgtgccacccccggcgcca 147

                                                                       
Query: 379 gcagtggaaatggctcagcttatatgtggtggttgccgaactttgctgatgtacacccgt 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gcagtggaaatggctcagcttatatgtggtggttgccgaactttgctgatgtacacccgt 207

                                                                       
Query: 439 aatgcagacactgtgagatgctcatgttgcagtacagtcaatcttgtcagaccagccaat 498
           ||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 208 aatgcaggcaccgtgagatgctcatgttgcagtactgtcaatcttgtcagaccagtcaat 267

                                                                       
Query: 499 aatatagcccacgtgaattgtggtcggtgccggacaactttgatgtatccacatggagca 558
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aatatagcccacgtgaactgtggtcggtgccggacaactttgatgtatccacatggagca 327

                 
Query: 559 ccttct 564
           ||||||
Sbjct: 328 ccttct 333
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>dbj|AK111569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071E13, full
           insert sequence
          Length = 1089

 Score =  281 bits (142), Expect = 1e-72
 Identities = 265/306 (86%)
 Strand = Plus / Plus

                                                                       
Query: 259 ggtatgcagagccagatcgtgtgccaccgttgccggagggtgctggcctacccgtcaggg 318
           ||||||||||||||||||||||||||  | |||||||| ||||||   ||||||   |||
Sbjct: 220 ggtatgcagagccagatcgtgtgccatggctgccggagcgtgctgcggtacccgagcggg 279

                                                                       
Query: 319 gcgcccagcgtgtgctgcgccatgtgccgagccatcaccgccgtgccacccccagcgcca 378
           ||||||||||||||||||||  | ||||  ||||||||| ||||||| ||||| || |||
Sbjct: 280 gcgcccagcgtgtgctgcgcgctctgccaggccatcaccaccgtgccgccccctgcccca 339

                                                                       
Query: 379 gcagtggaaatggctcagcttatatgtggtggttgccgaactttgctgatgtacacccgt 438
           | | ||||||||||||| || |||||||||||||||||||| ||||||||||| || || 
Sbjct: 340 gtaatggaaatggctcatctaatatgtggtggttgccgaacattgctgatgtatactcgc 399

                                                                       
Query: 439 aatgcagacactgtgagatgctcatgttgcagtacagtcaatcttgtcagaccagccaat 498
           ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||  |||
Sbjct: 400 aatgcggacactgtgagatgttcatgttgcagtacagtcaatcttgttagaccagtgaat 459

                                                                       
Query: 499 aatatagcccacgtgaattgtggtcggtgccggacaactttgatgtatccacatggagca 558
           |||||||| || ||||  ||||| | ||||||||| ||||||||||||||| |||| |||
Sbjct: 460 aatatagcacatgtgagctgtggccagtgccggacgactttgatgtatccatatggcgca 519

                 
Query: 559 ccttct 564
           ||||||
Sbjct: 520 ccttct 525
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>gb|AC147427.2| Oryza sativa chromosome 3  B1394A07 genomic sequence, complete sequence
          Length = 175704

 Score =  149 bits (75), Expect = 1e-32
 Identities = 102/111 (91%)
 Strand = Plus / Plus

                                                                          
Query: 383    tggaaatggctcagcttatatgtggtggttgccgaactttgctgatgtacacccgtaatg 442
              ||||||||||||| || |||||||||||||||||||| ||||||||||| || || ||||
Sbjct: 171719 tggaaatggctcatctaatatgtggtggttgccgaacattgctgatgtatactcgcaatg 171778

                                                                 
Query: 443    cagacactgtgagatgctcatgttgcagtacagtcaatcttgtcagaccag 493
              | |||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 171779 cggacactgtgagatgttcatgttgcagtacagtcaatcttgttagaccag 171829



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                          
Query: 254    ttgcaggtatgcagagccagatcgtgtgccaccgttgccggagggtgctggcctacccgt 313
              |||||||||||||||||||||||||||||||  | |||||||| ||||||   |||||| 
Sbjct: 169714 ttgcaggtatgcagagccagatcgtgtgccatggctgccggagcgtgctgcggtacccga 169773

                                                                        
Query: 314    caggggcgcccagcgtgtgctgcgccatgtgccgagccatcaccgccgtgccaccccc 371
                |||||||||||||||||||||||  | ||||  ||||||||| ||||||| |||||
Sbjct: 169774 gcggggcgcccagcgtgtgctgcgcgctctgccaggccatcaccaccgtgccgccccc 169831



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                          
Query: 496    aataatatagcccacgtgaattgtggtcggtgccggacaactttgatgtatccacatgga 555
              ||||||||||| || ||||  ||||| | ||||||||| ||||||||||||||| |||| 
Sbjct: 172958 aataatatagcacatgtgagctgtggccagtgccggacgactttgatgtatccatatggc 173017

                       
Query: 556    gcaccttct 564
              |||||||||
Sbjct: 173018 gcaccttct 173026
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>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence,
            complete sequence
          Length = 120254

 Score =  149 bits (75), Expect = 1e-32
 Identities = 102/111 (91%)
 Strand = Plus / Plus

                                                                        
Query: 383  tggaaatggctcagcttatatgtggtggttgccgaactttgctgatgtacacccgtaatg 442
            ||||||||||||| || |||||||||||||||||||| ||||||||||| || || ||||
Sbjct: 9816 tggaaatggctcatctaatatgtggtggttgccgaacattgctgatgtatactcgcaatg 9875

                                                               
Query: 443  cagacactgtgagatgctcatgttgcagtacagtcaatcttgtcagaccag 493
            | |||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 9876 cggacactgtgagatgttcatgttgcagtacagtcaatcttgttagaccag 9926



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                        
Query: 254  ttgcaggtatgcagagccagatcgtgtgccaccgttgccggagggtgctggcctacccgt 313
            |||||||||||||||||||||||||||||||  | |||||||| ||||||   |||||| 
Sbjct: 7811 ttgcaggtatgcagagccagatcgtgtgccatggctgccggagcgtgctgcggtacccga 7870

                                                                      
Query: 314  caggggcgcccagcgtgtgctgcgccatgtgccgagccatcaccgccgtgccaccccc 371
              |||||||||||||||||||||||  | ||||  ||||||||| ||||||| |||||
Sbjct: 7871 gcggggcgcccagcgtgtgctgcgcgctctgccaggccatcaccaccgtgccgccccc 7928



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                         
Query: 496   aataatatagcccacgtgaattgtggtcggtgccggacaactttgatgtatccacatgga 555
             ||||||||||| || ||||  ||||| | ||||||||| ||||||||||||||| |||| 
Sbjct: 11055 aataatatagcacatgtgagctgtggccagtgccggacgactttgatgtatccatatggc 11114

                      
Query: 556   gcaccttct 564
             |||||||||
Sbjct: 11115 gcaccttct 11123
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  149 bits (75), Expect = 1e-32
 Identities = 102/111 (91%)
 Strand = Plus / Minus

                                                                            
Query: 383      tggaaatggctcagcttatatgtggtggttgccgaactttgctgatgtacacccgtaatg 442
                ||||||||||||| || |||||||||||||||||||| ||||||||||| || || ||||
Sbjct: 24464141 tggaaatggctcatctaatatgtggtggttgccgaacattgctgatgtatactcgcaatg 24464082

                                                                   
Query: 443      cagacactgtgagatgctcatgttgcagtacagtcaatcttgtcagaccag 493
                | |||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 24464081 cggacactgtgagatgttcatgttgcagtacagtcaatcttgttagaccag 24464031



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                            
Query: 254      ttgcaggtatgcagagccagatcgtgtgccaccgttgccggagggtgctggcctacccgt 313
                |||||||||||||||||||||||||||||||  | |||||||| ||||||   |||||| 
Sbjct: 24466146 ttgcaggtatgcagagccagatcgtgtgccatggctgccggagcgtgctgcggtacccga 24466087

                                                                          
Query: 314      caggggcgcccagcgtgtgctgcgccatgtgccgagccatcaccgccgtgccaccccc 371
                  |||||||||||||||||||||||  | ||||  ||||||||| ||||||| |||||
Sbjct: 24466086 gcggggcgcccagcgtgtgctgcgcgctctgccaggccatcaccaccgtgccgccccc 24466029



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                            
Query: 496      aataatatagcccacgtgaattgtggtcggtgccggacaactttgatgtatccacatgga 555
                ||||||||||| || ||||  ||||| | ||||||||| ||||||||||||||| |||| 
Sbjct: 24462902 aataatatagcacatgtgagctgtggccagtgccggacgactttgatgtatccatatggc 24462843

                         
Query: 556      gcaccttct 564
                |||||||||
Sbjct: 24462842 gcaccttct 24462834
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  149 bits (75), Expect = 1e-32
 Identities = 102/111 (91%)
 Strand = Plus / Minus

                                                                            
Query: 383      tggaaatggctcagcttatatgtggtggttgccgaactttgctgatgtacacccgtaatg 442
                ||||||||||||| || |||||||||||||||||||| ||||||||||| || || ||||
Sbjct: 24381610 tggaaatggctcatctaatatgtggtggttgccgaacattgctgatgtatactcgcaatg 24381551

                                                                   
Query: 443      cagacactgtgagatgctcatgttgcagtacagtcaatcttgtcagaccag 493
                | |||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 24381550 cggacactgtgagatgttcatgttgcagtacagtcaatcttgttagaccag 24381500



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                            
Query: 254      ttgcaggtatgcagagccagatcgtgtgccaccgttgccggagggtgctggcctacccgt 313
                |||||||||||||||||||||||||||||||  | |||||||| ||||||   |||||| 
Sbjct: 24383615 ttgcaggtatgcagagccagatcgtgtgccatggctgccggagcgtgctgcggtacccga 24383556

                                                                          
Query: 314      caggggcgcccagcgtgtgctgcgccatgtgccgagccatcaccgccgtgccaccccc 371
                  |||||||||||||||||||||||  | ||||  ||||||||| ||||||| |||||
Sbjct: 24383555 gcggggcgcccagcgtgtgctgcgcgctctgccaggccatcaccaccgtgccgccccc 24383498



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                            
Query: 496      aataatatagcccacgtgaattgtggtcggtgccggacaactttgatgtatccacatgga 555
                ||||||||||| || ||||  ||||| | ||||||||| ||||||||||||||| |||| 
Sbjct: 24380371 aataatatagcacatgtgagctgtggccagtgccggacgactttgatgtatccatatggc 24380312

                         
Query: 556      gcaccttct 564
                |||||||||
Sbjct: 24380311 gcaccttct 24380303
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>gb|AY112561.1| Zea mays CL39582_1 mRNA sequence
          Length = 749

 Score =  139 bits (70), Expect = 1e-29
 Identities = 148/174 (85%)
 Strand = Plus / Minus

                                                                       
Query: 390 ggctcagcttatatgtggtggttgccgaactttgctgatgtacacccgtaatgcagacac 449
           ||||||||||||||||||||| || ||||||||||||||||| || || | |||||||||
Sbjct: 715 ggctcagcttatatgtggtggctgtcgaactttgctgatgtatactcgcagtgcagacac 656

                                                                       
Query: 450 tgtgagatgctcatgttgcagtacagtcaatcttgtcagaccagccaataatatagccca 509
            || || || ||||||||||  ||||| || ||||| |||||||  ||||||||||| ||
Sbjct: 655 cgtaaggtgttcatgttgcaacacagtgaaccttgttagaccagtgaataatatagctca 596

                                                                 
Query: 510 cgtgaattgtggtcggtgccggacaactttgatgtatccacatggagcaccttc 563
            ||||| || || | ||||||||||||||||||||||||| | || ||||||||
Sbjct: 595 tgtgaactgcggccagtgccggacaactttgatgtatccatacggcgcaccttc 542
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>dbj|AK111837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139G05, full
           insert sequence
          Length = 1182

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 145/175 (82%), Gaps = 2/175 (1%)
 Strand = Plus / Plus

                                                                       
Query: 391 gctcagcttatatgtggtggttgccgaactttgctgatgtacacccgtaatgcagaca-c 449
           ||||| |||||||||||||| |||||||||||  ||||||| || || ||||| |||| |
Sbjct: 342 gctcatcttatatgtggtggatgccgaactttattgatgtatactcgcaatgc-gacatc 400

                                                                       
Query: 450 tgtgagatgctcatgttgcagtacagtcaatcttgtcagaccagccaataatatagccca 509
           ||| ||||| || || |||  |||||||||||||||||||||||  | || |||||| ||
Sbjct: 401 tgttagatgttcgtgctgcgatacagtcaatcttgtcagaccagtgagtagtatagctca 460

                                                                  
Query: 510 cgtgaattgtggtcggtgccggacaactttgatgtatccacatggagcaccttct 564
           | |||| ||||| | ||||| ||||   |||||||||||| | ||||||||||||
Sbjct: 461 cttgaactgtggccagtgccagacagtgttgatgtatccatacggagcaccttct 515



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 262 atgcagagccagatcgtgtgcca 284
           |||||||||||||||||||||||
Sbjct: 216 atgcagagccagatcgtgtgcca 238
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 89/104 (85%), Gaps = 2/104 (1%)
 Strand = Plus / Minus

                                                                            
Query: 391      gctcagcttatatgtggtggttgccgaactttgctgatgtacacccgtaatgcagaca-c 449
                ||||| |||||||||||||| |||||||||||  ||||||| || || ||||| |||| |
Sbjct: 25850750 gctcatcttatatgtggtggatgccgaactttattgatgtatactcgcaatgc-gacatc 25850692

                                                            
Query: 450      tgtgagatgctcatgttgcagtacagtcaatcttgtcagaccag 493
                ||| ||||| || || |||  |||||||||||||||||||||||
Sbjct: 25850691 tgttagatgttcgtgctgcgatacagtcaatcttgtcagaccag 25850648



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 256      gcaggtatgcagagccagatcgtgtgcca 284
                ||||| |||||||||||||||||||||||
Sbjct: 25851856 gcaggcatgcagagccagatcgtgtgcca 25851828



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                            
Query: 501      tatagcccacgtgaattgtggtcggtgccggacaactttgatgtatccacatggagcacc 560
                |||||| ||| |||| ||||| | ||||| ||||   |||||||||||| | ||||||||
Sbjct: 25849858 tatagctcacttgaactgtggccagtgccagacagtgttgatgtatccatacggagcacc 25849799

                    
Query: 561      ttct 564
                ||||
Sbjct: 25849798 ttct 25849795
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 89/104 (85%), Gaps = 2/104 (1%)
 Strand = Plus / Minus

                                                                            
Query: 391      gctcagcttatatgtggtggttgccgaactttgctgatgtacacccgtaatgcagaca-c 449
                ||||| |||||||||||||| |||||||||||  ||||||| || || ||||| |||| |
Sbjct: 25778926 gctcatcttatatgtggtggatgccgaactttattgatgtatactcgcaatgc-gacatc 25778868

                                                            
Query: 450      tgtgagatgctcatgttgcagtacagtcaatcttgtcagaccag 493
                ||| ||||| || || |||  |||||||||||||||||||||||
Sbjct: 25778867 tgttagatgttcgtgctgcgatacagtcaatcttgtcagaccag 25778824



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 256      gcaggtatgcagagccagatcgtgtgcca 284
                ||||| |||||||||||||||||||||||
Sbjct: 25780032 gcaggcatgcagagccagatcgtgtgcca 25780004



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                            
Query: 501      tatagcccacgtgaattgtggtcggtgccggacaactttgatgtatccacatggagcacc 560
                |||||| ||| |||| ||||| | ||||| ||||   |||||||||||| | ||||||||
Sbjct: 25778034 tatagctcacttgaactgtggccagtgccagacagtgttgatgtatccatacggagcacc 25777975

                    
Query: 561      ttct 564
                ||||
Sbjct: 25777974 ttct 25777971
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>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 89/104 (85%), Gaps = 2/104 (1%)
 Strand = Plus / Minus

                                                                         
Query: 391   gctcagcttatatgtggtggttgccgaactttgctgatgtacacccgtaatgcagaca-c 449
             ||||| |||||||||||||| |||||||||||  ||||||| || || ||||| |||| |
Sbjct: 72201 gctcatcttatatgtggtggatgccgaactttattgatgtatactcgcaatgc-gacatc 72143

                                                         
Query: 450   tgtgagatgctcatgttgcagtacagtcaatcttgtcagaccag 493
             ||| ||||| || || |||  |||||||||||||||||||||||
Sbjct: 72142 tgttagatgttcgtgctgcgatacagtcaatcttgtcagaccag 72099



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 256   gcaggtatgcagagccagatcgtgtgcca 284
             ||||| |||||||||||||||||||||||
Sbjct: 73307 gcaggcatgcagagccagatcgtgtgcca 73279



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                         
Query: 501   tatagcccacgtgaattgtggtcggtgccggacaactttgatgtatccacatggagcacc 560
             |||||| ||| |||| ||||| | ||||| ||||   |||||||||||| | ||||||||
Sbjct: 71309 tatagctcacttgaactgtggccagtgccagacagtgttgatgtatccatacggagcacc 71250

                 
Query: 561   ttct 564
             ||||
Sbjct: 71249 ttct 71246
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>gb|AF475127.1| Triticum aestivum 18S subunit ribosomal protein mRNA, partial cds
          Length = 465

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 90/109 (82%)
 Strand = Plus / Plus

                                                                       
Query: 386 aaatggctcagcttatatgtggtggttgccgaactttgctgatgtacacccgtaatgcag 445
           ||||||||||||||||||| |  || || ||||||||  ||||||| || || |||||| 
Sbjct: 44  aaatggctcagcttatatgcgtcggctgtcgaactttattgatgtatactcgcaatgcaa 103

                                                            
Query: 446 acactgtgagatgctcatgttgcagtacagtcaatcttgtcagaccagc 494
             ||||| ||||||||||||||   ||||||||| |||| |||||||||
Sbjct: 104 ctactgtcagatgctcatgttgtgatacagtcaaccttgccagaccagc 152
to top
>gb|AY112520.1| Zea mays CL889_1 mRNA sequence
          Length = 1158

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 95/118 (80%)
 Strand = Plus / Plus

                                                                       
Query: 376 ccagcagtggaaatggctcagcttatatgtggtggttgccgaactttgctgatgtacacc 435
           |||||| |||| |||||||  |||||||||||||| ||||  || ||  |||||||  | 
Sbjct: 245 ccagcaatggagatggctcgacttatatgtggtggctgccagacattattgatgtatgct 304

                                                                     
Query: 436 cgtaatgcagacactgtgagatgctcatgttgcagtacagtcaatcttgtcagaccag 493
           || | ||||   ||||| ||||||||||||||    ||||||||||||||||||||||
Sbjct: 305 cgcagtgcaacaactgtaagatgctcatgttgtgacacagtcaatcttgtcagaccag 362



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 262 atgcagagccagatcgtgtgccac 285
           |||||||||||||| |||||||||
Sbjct: 137 atgcagagccagatagtgtgccac 160
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>gb|AF453322.1| Brassica oleracea zinc finger protein LSD1 (LSD1) mRNA, complete
           cds
          Length = 1027

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 383 tggaaatggctcagcttatatgtggtggttgccgaactttgctgatgtacac 434
           |||| ||||||||  || ||||||||||||| |||||| |||| ||||||||
Sbjct: 316 tggacatggctcacattgtatgtggtggttgtcgaactatgcttatgtacac 367
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>gb|AC161205.3| Mus musculus chromosome 7, clone RP23-53C15, complete sequence
          Length = 244671

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 85     cttctccccctccgatcctctttctccccccttcc 119
              |||||||||||||  |||||| |||||||||||||
Sbjct: 141625 cttctccccctcccttcctctctctccccccttcc 141659
to top
>gb|BC047471.1| Homo sapiens hypothetical LOC554208, mRNA (cDNA clone MGC:48509
           IMAGE:5298290), complete cds
          Length = 2012

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 108 ctccccccttccccgccgcctccgcc 133
           |||||||||||||| |||||||||||
Sbjct: 159 ctccccccttcccccccgcctccgcc 184
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>gb|BC031277.1| Homo sapiens hypothetical LOC554208, mRNA (cDNA clone MGC:39769
           IMAGE:5295327), complete cds
          Length = 1936

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 108 ctccccccttccccgccgcctccgcc 133
           |||||||||||||| |||||||||||
Sbjct: 169 ctccccccttcccccccgcctccgcc 194
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 118      ccccgccgcctccgccggcgag 139
                ||||||||||||||||||||||
Sbjct: 11032012 ccccgccgcctccgccggcgag 11031991



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 114      ccttccccgccgcctccgcc 133
                ||||||||||||||||||||
Sbjct: 20026323 ccttccccgccgcctccgcc 20026304
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>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0501G08
          Length = 173505

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 118    ccccgccgcctccgccggcgag 139
              ||||||||||||||||||||||
Sbjct: 116094 ccccgccgcctccgccggcgag 116073
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>dbj|AK109425.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C05, full
           insert sequence
          Length = 1017

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 118 ccccgccgcctccgccggcgag 139
           ||||||||||||||||||||||
Sbjct: 163 ccccgccgcctccgccggcgag 184
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>dbj|AK098759.1| Homo sapiens cDNA FLJ25893 fis, clone CBR03492
          Length = 2344

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 108 ctccccccttccccgccgcctccgcc 133
           |||||||||||||| |||||||||||
Sbjct: 192 ctccccccttcccccccgcctccgcc 217
to top
>dbj|AK068813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159M08, full
           insert sequence
          Length = 1024

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 118 ccccgccgcctccgccggcgag 139
           ||||||||||||||||||||||
Sbjct: 170 ccccgccgcctccgccggcgag 191
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>ref|XM_471505.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1239

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 110 ccccccttccccgccgcctcc 130
           |||||||||||||||||||||
Sbjct: 270 ccccccttccccgccgcctcc 250
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>ref|XM_414246.1| PREDICTED: Gallus gallus similar to FELE-1 (LOC415894), mRNA
          Length = 7629

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 353  tcaccgccgtgccacccccag 373
            |||||||||||||||||||||
Sbjct: 6628 tcaccgccgtgccacccccag 6648
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 110      ccccccttccccgccgcctcc 130
                |||||||||||||||||||||
Sbjct: 11475029 ccccccttccccgccgcctcc 11475049



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 120      ccgccgcctccgccggcgag 139
                ||||||||||||||||||||
Sbjct: 32171449 ccgccgcctccgccggcgag 32171430
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>gb|AF225314.1|AF225314 Bonasa umbellus clone A3 endogenous ASLV retrovirus gag polyprotein
           (gag) gene, partial cds
          Length = 834

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 200 cggagccaccggagggctgggacgg 224
           |||||||||||| ||||||||||||
Sbjct: 600 cggagccaccggtgggctgggacgg 624
to top
>dbj|AK121455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142P15, full
           insert sequence
          Length = 1598

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 110 ccccccttccccgccgcctcc 130
           |||||||||||||||||||||
Sbjct: 481 ccccccttccccgccgcctcc 461
to top
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 316     ggggcgcccagcgtgtgctgc 336
               |||||||||||||||||||||
Sbjct: 1146477 ggggcgcccagcgtgtgctgc 1146497
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>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete
             sequence
          Length = 223059

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 108   ctccccccttccccgccgcctccgccggc 136
             ||||||||| |||| ||||||||||||||
Sbjct: 43516 ctcccccctccccctccgcctccgccggc 43544
to top
>emb|AL606602.2|OSJN00067 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0056F09,
              complete sequence
          Length = 148191

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 110    ccccccttccccgccgcctcc 130
              |||||||||||||||||||||
Sbjct: 100642 ccccccttccccgccgcctcc 100662
to top
>ref|XM_514782.1| PREDICTED: Pan troglodytes PPAR-alpha interacting complex protein 285
            (LOC458410), mRNA
          Length = 9036

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   cttccttcaccgcgtctcct 57
            ||||||||||||||||||||
Sbjct: 3979 cttccttcaccgcgtctcct 3960
to top
>gb|DQ215779.1| Taeniopygia guttata clone 0058P0046G08 mitochondrial ribosomal
           protein L50-like mRNA, complete sequence
          Length = 851

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 363 gccacccccagcgccagcag 382
           ||||||||||||||||||||
Sbjct: 61  gccacccccagcgccagcag 42
to top
>gb|DQ215778.1| Taeniopygia guttata clone 0058P0035E07 mitochondrial ribosomal
           protein L50-like mRNA, complete sequence
          Length = 837

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 363 gccacccccagcgccagcag 382
           ||||||||||||||||||||
Sbjct: 50  gccacccccagcgccagcag 31
to top
>gb|DQ215777.1| Taeniopygia guttata clone 0058P0036C01 mitochondrial ribosomal
           protein L50-like mRNA, complete sequence
          Length = 837

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 363 gccacccccagcgccagcag 382
           ||||||||||||||||||||
Sbjct: 50  gccacccccagcgccagcag 31
to top
>gb|DQ215776.1| Taeniopygia guttata clone 0058P0055C06 mitochondrial ribosomal
           protein L50-like mRNA, complete sequence
          Length = 837

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 363 gccacccccagcgccagcag 382
           ||||||||||||||||||||
Sbjct: 38  gccacccccagcgccagcag 19
to top
>gb|DQ215775.1| Taeniopygia guttata clone 0058P0037B04 mitochondrial ribosomal
           protein L50-like mRNA, complete sequence
          Length = 838

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 363 gccacccccagcgccagcag 382
           ||||||||||||||||||||
Sbjct: 39  gccacccccagcgccagcag 20
to top
>gb|DQ215774.1| Taeniopygia guttata clone 0061P0007H09 mitochondrial ribosomal
           protein L50-like mRNA, complete sequence
          Length = 932

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 363 gccacccccagcgccagcag 382
           ||||||||||||||||||||
Sbjct: 155 gccacccccagcgccagcag 136
to top
>gb|DQ215773.1| Taeniopygia guttata clone 0058P0006E05 mitochondrial ribosomal
           protein L50-like mRNA, complete sequence
          Length = 841

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 363 gccacccccagcgccagcag 382
           ||||||||||||||||||||
Sbjct: 37  gccacccccagcgccagcag 18
to top
>gb|DQ215772.1| Taeniopygia guttata clone 0058P0044F12 mitochondrial ribosomal
           protein L50-like mRNA, complete sequence
          Length = 836

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 363 gccacccccagcgccagcag 382
           ||||||||||||||||||||
Sbjct: 36  gccacccccagcgccagcag 17
to top
>ref|XM_479207.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 603

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 ccgccgcctccgccggcgagaatc 143
           |||||||| |||||||||||||||
Sbjct: 254 ccgccgccgccgccggcgagaatc 231
to top
>ref|NM_175332.2| Mus musculus RIKEN cDNA E130012A19 gene (E130012A19Rik), mRNA
          Length = 2316

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 gcgggcctctccccggagcc 206
           ||||||||||||||||||||
Sbjct: 969 gcgggcctctccccggagcc 988
to top
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 358    gccgtgccacccccagcgccagca 381
              ||||||||| ||||||||||||||
Sbjct: 814455 gccgtgccagccccagcgccagca 814478
to top
>gb|AC166357.3| Mus musculus BAC clone RP23-360N1 from chromosome 7, complete sequence
          Length = 220916

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   gacccaggagccctctgtca 183
             ||||||||||||||||||||
Sbjct: 92466 gacccaggagccctctgtca 92485
to top
>gb|AF238380.3| Homo sapiens chromosome X multiple clones map p11.23, complete sequence
          Length = 158698

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    ccttccccgccgcctccgcc 133
              ||||||||||||||||||||
Sbjct: 102838 ccttccccgccgcctccgcc 102819



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    ccttccccgccgcctccgcc 133
              ||||||||||||||||||||
Sbjct: 102820 ccttccccgccgcctccgcc 102801
to top
>gb|BC055770.1| Mus musculus RIKEN cDNA E130012A19 gene, mRNA (cDNA clone MGC:67345
            IMAGE:6403695), complete cds
          Length = 2349

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 187  gcgggcctctccccggagcc 206
            ||||||||||||||||||||
Sbjct: 982  gcgggcctctccccggagcc 1001
to top
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    tgccacccccagcgccagca 381
              ||||||||||||||||||||
Sbjct: 124725 tgccacccccagcgccagca 124706
to top
>ref|XM_543959.2| PREDICTED: Canis familiaris similar to Lysyl oxidase homolog 4
           precursor (Lysyl oxidase-like protein 4) (Lysyl oxidase
           related protein C) (LOC486830), mRNA
          Length = 2467

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gtgccacccccagcgccagc 380
           ||||||||||||||||||||
Sbjct: 510 gtgccacccccagcgccagc 529
to top
>gb|BC006054.1| Mus musculus RIKEN cDNA E130012A19 gene, mRNA (cDNA clone
           IMAGE:3591061), partial cds
          Length = 1787

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 gcgggcctctccccggagcc 206
           ||||||||||||||||||||
Sbjct: 421 gcgggcctctccccggagcc 440
to top
>gb|AC124926.7| Rattus norvegicus X BAC CH230-155H3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 217309

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   tcctctttctccccccttcc 119
             ||||||||||||||||||||
Sbjct: 45910 tcctctttctccccccttcc 45891
to top
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13,
             complete sequence
          Length = 127135

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ccgccgcctccgccggcgag 139
             ||||||||||||||||||||
Sbjct: 67138 ccgccgcctccgccggcgag 67119
to top
>emb|AJ289241.1|MMU289241 Mus musculus Capn12 gene for calpain 12, exons 1-21, three alternative
             transcipts
          Length = 13116

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   gacccaggagccctctgtca 183
             ||||||||||||||||||||
Sbjct: 10374 gacccaggagccctctgtca 10355
to top
>gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, complete sequence
          Length = 229633

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    ctctttctccccccttcccc 121
              ||||||||||||||||||||
Sbjct: 208512 ctctttctccccccttcccc 208531
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>dbj|AB206392.1| Zea mays ZmHK1b1' mRNA for histidine kinase, complete cds
          Length = 3046

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 114 ccttccccgccgcctccgccggcg 137
           ||||||||||| ||||||||||||
Sbjct: 91  ccttccccgcctcctccgccggcg 68
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>dbj|AB206391.1| Zea mays ZmHK1b1 mRNA for histidine kinase, complete cds
          Length = 3046

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 114 ccttccccgccgcctccgccggcg 137
           ||||||||||| ||||||||||||
Sbjct: 91  ccttccccgcctcctccgccggcg 68
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>gb|AC103809.2| Homo sapiens chromosome 17, clone RP11-647F2, complete sequence
          Length = 198764

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   tccccccttccccgccgcctccgc 132
             |||||||| |||||||||||||||
Sbjct: 16528 tcccccctcccccgccgcctccgc 16505
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>gb|AC160392.2| Mus musculus BAC clone RP23-240E9 from chromosome 9, complete sequence
          Length = 199695

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   gtgctgcgccatgtgccgag 349
             ||||||||||||||||||||
Sbjct: 59042 gtgctgcgccatgtgccgag 59023
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>dbj|AK029042.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732483O06 product:calpain 12, full
           insert sequence
          Length = 2445

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 164 gacccaggagccctctgtca 183
           ||||||||||||||||||||
Sbjct: 697 gacccaggagccctctgtca 678
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>gb|AC090054.2|AC090054 Oryza sativa chromosome 9 clone PAC0645D04, complete sequence
          Length = 139050

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   cccccttccccgccgcctccgccg 134
             ||||||||||||||||| ||||||
Sbjct: 84353 cccccttccccgccgccgccgccg 84330
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>dbj|AK087411.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130012A19 product:hypothetical protein,
           full insert sequence
          Length = 2316

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 gcgggcctctccccggagcc 206
           ||||||||||||||||||||
Sbjct: 969 gcgggcctctccccggagcc 988
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>gb|AC000050.22| Homo sapiens Chromosome 22q13 Cosmid Clone n66c4, complete sequence
          Length = 42167

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 112   ccccttccccgccgcctccgccgg 135
             ||||| ||||||||||||||||||
Sbjct: 11006 cccctcccccgccgcctccgccgg 11029
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>dbj|AK041440.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630009D04 product:unclassifiable, full
            insert sequence
          Length = 3215

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  gtgctgcgccatgtgccgag 349
            ||||||||||||||||||||
Sbjct: 2016 gtgctgcgccatgtgccgag 1997
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 111     cccccttccccgccgcctccgccg 134
               ||||||||||||||||| ||||||
Sbjct: 5977192 cccccttccccgccgccgccgccg 5977169
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 120      ccgccgcctccgccggcgagaatc 143
                |||||||| |||||||||||||||
Sbjct: 25831091 ccgccgccgccgccggcgagaatc 25831068
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 120     ccgccgcctccgccggcgagaatcgccg 147
               |||||||| ||| |||||||||||||||
Sbjct: 2153275 ccgccgccaccggcggcgagaatcgccg 2153302
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>gb|AE009682.1| Brucella melitensis 16M chromosome II, section 44 of 107 of the
            complete sequence
          Length = 10758

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 358  gccgtgccacccccagcgccagca 381
            ||||||||| ||||||||||||||
Sbjct: 7195 gccgtgccagccccagcgccagca 7172
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>gb|AC021659.16| Homo sapiens 3 BAC RP11-446K3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 101800

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   ctctttctccccccttcccc 121
             ||||||||||||||||||||
Sbjct: 73729 ctctttctccccccttcccc 73748
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>gb|AC100791.15| Homo sapiens chromosome 17, clone RP11-353N14, complete sequence
          Length = 215313

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 166   cccaggagccctctgtcacgggcg 189
             ||||||||||| ||||||||||||
Sbjct: 76582 cccaggagcccgctgtcacgggcg 76605
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>gb|AC055863.16| Homo sapiens chromosome 17, clone RP11-478P5, complete sequence
          Length = 152348

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 109   tccccccttccccgccgcctccgc 132
             |||||||| |||||||||||||||
Sbjct: 82638 tcccccctcccccgccgcctccgc 82661
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>gb|AF225338.1|AF225338 Dendragapus canadensis clone 5 endogenous ASLV retrovirus gag
           polyprotein (gag) gene, partial cds
          Length = 867

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 200 cggagccaccggagggctgggacg 223
           |||||||||||| |||||||||||
Sbjct: 624 cggagccaccggtgggctgggacg 647
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>gb|AF225337.1|AF225337 Dendragapus canadensis clone 1 endogenous ASLV retrovirus gag
           polyprotein (gag) gene, partial cds
          Length = 1306

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 200 cggagccaccggagggctgggacg 223
           |||||||||||| |||||||||||
Sbjct: 624 cggagccaccggtgggctgggacg 647
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>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 358    gccgtgccacccccagcgccagca 381
              ||||||||| ||||||||||||||
Sbjct: 402662 gccgtgccagccccagcgccagca 402639
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>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1068H08
          Length = 152794

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   ccttccccgccgcctccgcc 133
             ||||||||||||||||||||
Sbjct: 14597 ccttccccgccgcctccgcc 14578
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>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1018E06
          Length = 178499

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    ccttccccgccgcctccgcc 133
              ||||||||||||||||||||
Sbjct: 164663 ccttccccgccgcctccgcc 164644
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>dbj|AP006727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0645D04
          Length = 142890

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   cccccttccccgccgcctccgccg 134
             ||||||||||||||||| ||||||
Sbjct: 88123 cccccttccccgccgccgccgccg 88100
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>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1679_B08
          Length = 142529

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 120   ccgccgcctccgccggcgagaatcgccg 147
             |||||||| ||| |||||||||||||||
Sbjct: 67968 ccgccgccaccggcggcgagaatcgccg 67995
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0524E08
          Length = 154696

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 120    ccgccgcctccgccggcgagaatc 143
              |||||||| |||||||||||||||
Sbjct: 148253 ccgccgccgccgccggcgagaatc 148230
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>ref|XM_564195.1| Anopheles gambiae str. PEST ENSANGP00000028864
           (ENSANGG00000012526), mRNA
          Length = 2980

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cggccagtctcgtccagagc 245
           ||||||||||||||||||||
Sbjct: 542 cggccagtctcgtccagagc 523
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>ref|XM_564194.1| Anopheles gambiae str. PEST ENSANGP00000028392
           (ENSANGG00000012526), mRNA
          Length = 2954

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cggccagtctcgtccagagc 245
           ||||||||||||||||||||
Sbjct: 516 cggccagtctcgtccagagc 497
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>dbj|AK105291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-G05, full
           insert sequence
          Length = 1527

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 cccccttccccgccgcctccgccg 134
           ||||||||||||||||| ||||||
Sbjct: 168 cccccttccccgccgccgccgccg 145
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>dbj|AK066454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065K03, full
           insert sequence
          Length = 1815

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 120 ccgccgcctccgccggcgagaatcgccg 147
           |||||||| ||| |||||||||||||||
Sbjct: 85  ccgccgccaccggcggcgagaatcgccg 58
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>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1339_F05
          Length = 132708

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  ccgccgcctccgccggcgagaatc 143
            |||||||| |||||||||||||||
Sbjct: 1539 ccgccgccgccgccggcgagaatc 1516
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>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete
             sequence
          Length = 62215

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ccgccgcctccgccggcgag 139
             ||||||||||||||||||||
Sbjct: 22703 ccgccgcctccgccggcgag 22684
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>emb|AL137779.6|CNS01DWM Human chromosome 14 DNA sequence BAC C-2017C7 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 189116

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ctctttctccccccttcccc 121
             ||||||||||||||||||||
Sbjct: 96318 ctctttctccccccttcccc 96299
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>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence,
              strain 2308
          Length = 1156948

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 358    gccgtgccacccccagcgccagca 381
              ||||||||| ||||||||||||||
Sbjct: 402732 gccgtgccagccccagcgccagca 402709
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 118     ccccgccgcctccgccggcg 137
               ||||||||||||||||||||
Sbjct: 1081663 ccccgccgcctccgccggcg 1081682
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>emb|AL831722.8| Mouse DNA sequence from clone RP23-312D15 on chromosome X, complete
             sequence
          Length = 148564

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   cctctttctccccccttccc 120
             ||||||||||||||||||||
Sbjct: 43836 cctctttctccccccttccc 43855
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>emb|AL596123.32| Mouse DNA sequence from clone RP23-94N18 on chromosome 11, complete
             sequence
          Length = 165196

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   gcgggcctctccccggagcc 206
             ||||||||||||||||||||
Sbjct: 70447 gcgggcctctccccggagcc 70428


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,047,108
Number of Sequences: 3902068
Number of extensions: 4047108
Number of successful extensions: 85933
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85046
Number of HSP's gapped (non-prelim): 877
length of query: 564
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 541
effective length of database: 17,143,297,704
effective search space: 9274524057864
effective search space used: 9274524057864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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