Clone Information

BLAST Search Result

Clone Name	bart13c08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	H1_WHEAT (P27806) Histone H1	120	2e-27
2	H1_MAIZE (P23444) Histone H1	91	2e-18
3	H1_EUPES (Q9M5W4) Histone H1	76	5e-14
4	H1_LYCPN (P40267) Histone H1	72	1e-12
5	H1_LYCES (P37218) Histone H1	69	6e-12
6	H1_PEA (P08283) Histone H1 (PsH1b) (PsH1b-40)	69	6e-12
7	H12_ARATH (P26569) Histone H1.2	68	1e-11
8	H11_ARATH (P26568) Histone H1.1	67	2e-11
9	H11_VOLCA (Q08864) Histone H1-I	54	4e-07
10	H12_VOLCA (Q08865) Histone H1-II	46	8e-05
11	H13_WHEAT (P15872) Histone H1.3 (Fragments)	44	4e-04
12	H1_ASHGO (Q75C22) Histone H1	40	0.003
13	H1_DICDI (P54671) Histone H1	40	0.003
14	H1B_STRPU (P15869) Histone H1-beta, late embryonic	40	0.003
15	H1E_CHITE (P40278) Histone H1E	40	0.004
16	H1E_CHIPA (P40262) Histone H1E	40	0.004
17	H5_CHICK (P02259) Histone H5	40	0.006
18	H1_YEAST (P53551) Histone H1	40	0.006
19	H1O_CHITH (Q07134) Histone H1, orphon	40	0.006
20	H1_LYTPI (P06144) Late histone H1	39	0.007
21	H1_ASCIM (Q9UV33) Histone H1	39	0.012
22	H5_CAIMO (P06513) Histone H5	39	0.012
23	H1A_OLILU (P82898) Histone H1A (Fragment)	38	0.016
24	H1G_STRPU (P07796) Histone H1-gamma, late	38	0.021
25	H12_GLYBA (P40264) Histone H1-II	36	0.061
26	H1B_OLILU (P82899) Histone H1B (Fragment)	36	0.061
27	LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 prote...	36	0.061
28	H1_CANGA (Q6FJX6) Histone H1	36	0.061
29	H5_ANSAN (P02258) Histone H5	36	0.080
30	H13_GLYBA (P40265) Histone H1-III	35	0.10
31	H15_CAEEL (O01833) Histone H1.5 (Histone H1-like protein 5)	35	0.10
32	H1B_CHITE (P40276) Histone H1B	35	0.14
33	H1_DROHY (P17268) Histone H1	35	0.14
34	H13_DROVI (Q94972) Histone H1.3	35	0.18
35	H12_DROVI (Q94555) Histone H1.2	35	0.18
36	H11_WHEAT (P15871) Histone H1.1 (Fragment)	35	0.18
37	H1_TIGCA (P35060) Histone H1	35	0.18
38	H1C_CHITE (P40277) Histone H1C	35	0.18
39	H5A_XENLA (P22844) Histone H5A (XLH5A) (H1D) (H1-SA)	34	0.23
40	H1A_CHITE (P40275) Histone H1A	34	0.23
41	H1A_PLADU (P06894) Histone H1A, sperm	34	0.23
42	H1_CHITH (P21895) Histone H1	34	0.23
43	H5B_XENLA (P22845) Histone H5B (XLH5B) (H1E) (H1-SB)	34	0.30
44	H16_CAEEL (O16277) Putative histone H1.6 (Histone H1-like protei...	34	0.30
45	H1E_STRPU (P19375) Histone H1, early embryonic	34	0.30
46	H11_GLYSA (P40266) Histone H1-I	33	0.40
47	H11_GLYBA (P40263) Histone H1-I	33	0.40
48	H10_RAT (P43278) Histone H1.0 (H1(0)) (Histone H1')	33	0.40
49	H10_MOUSE (P10922) Histone H1' (H1.0) (H1(0))	33	0.40
50	H10_HUMAN (P07305) Histone H1.0 (H1(0)) (Histone H1')	33	0.40
51	H1_DROME (P02255) Histone H1	33	0.40
52	H12_CAEEL (P15796) Histone H1.2 (Histone H1-like protein 2)	33	0.52
53	I15RA_MOUSE (Q60819) Interleukin-15 receptor alpha chain precurs...	33	0.52
54	H1_NEUCR (Q8J0U2) Histone H1	33	0.67
55	H1L5_ENSMI (P27203) Histone H1-like protein EM5 (Fragment)	33	0.67
56	H11_CAEEL (P10771) Histone H1.1	33	0.67
57	H1_PARAN (P02256) Histone H1, gonadal	32	0.88
58	H13_CAEEL (Q19743) Histone H1.3 (Histone H1-like protein 3)	32	0.88
59	KCNN1_RAT (P70606) Small conductance calcium-activated potassium...	32	0.88
60	H1_EMENI (Q9P8F8) Histone H1	32	0.88
61	TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein ...	32	1.1
62	H11_DROVI (Q24704) Histone H1.1	32	1.1
63	TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorti...	32	1.1
64	H1_ECHCR (P02257) Histone H1, gonadal (Fragment)	32	1.5
65	H1D_STRPU (P15870) Histone H1-delta	32	1.5
66	K1949_PIG (Q767M0) Protein KIAA1949 homolog	32	1.5
67	CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)	32	1.5
68	BASP_MOUSE (Q91XV3) Brain acid soluble protein 1 (BASP1 protein)...	32	1.5
69	LIPA3_HUMAN (O75145) Liprin-alpha-3 (Protein tyrosine phosphatas...	32	1.5
70	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	32	1.5
71	NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Si...	31	2.0
72	H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)	31	2.0
73	H1L2_OSTED (Q86QI0) Sperm-specific H1/protamine-like protein typ...	31	2.6
74	IE18_PRVKA (P33479) Immediate-early protein IE180	30	3.3
75	H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm...	30	3.3
76	H1L1_OSTED (Q86QH9) Sperm-specific H1/protamine-like protein typ...	30	3.3
77	CCD71_RAT (Q4V7C4) Coiled-coil domain-containing protein 71	30	3.3
78	SECD_MYCTU (Q50634) Protein-export membrane protein secD	30	3.3
79	PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)	30	3.3
80	ZAN_MOUSE (O88799) Zonadhesin precursor	30	3.3
81	AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)	30	4.4
82	MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupl...	30	4.4
83	H1B_PLADU (P06895) Histone H1B, sperm	30	4.4
84	MPA5B_LOLPR (Q40237) Major pollen allergen Lol p 5b precursor (L...	30	4.4
85	IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 s...	30	4.4
86	CDT1_MOUSE (Q8R4E9) DNA replication factor Cdt1 (Double parked h...	30	4.4
87	IF2_PELLD (Q3B1Z8) Translation initiation factor IF-2	30	4.4
88	ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7...	30	5.7
89	SCG1_MOUSE (P16014) Secretogranin-1 precursor (Secretogranin I) ...	30	5.7
90	PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)	30	5.7
91	HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)	30	5.7
92	H103_CHICK (P08285) Histone H1.03	29	7.5
93	BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTP...	29	7.5
94	IF2_METCA (Q609C0) Translation initiation factor IF-2	29	7.5
95	TR10C_HUMAN (O14798) Tumor necrosis factor receptor superfamily ...	29	7.5
96	CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-ch...	29	7.5
97	HNRPU_HUMAN (Q00839) Heterogenous nuclear ribonucleoprotein U (h...	29	7.5
98	PEX14_HUMAN (O75381) Peroxisomal membrane protein PEX14 (Peroxin...	29	9.7
99	EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)	29	9.7
100	LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I)	29	9.7
101	Y1583_MYCTU (O06607) Hypothetical protein Rv1583c/MT3573.2	29	9.7
102	H1X_CAEEL (Q18336) Histone H1.X (Histone H1-like protein 1)	29	9.7
103	NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neur...	29	9.7
104	EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400...	29	9.7

>H1_WHEAT (P27806) Histone H1|
          Length = 238

 Score =  120 bits (301), Expect = 2e-27
 Identities = 73/126 (57%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
 Frame = +3

Query: 78  MSTD-AAADIPVPQVEATADPVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 254
           MSTD AAADIPVPQVE  AD  V+                                    
Sbjct: 1   MSTDVAAADIPVPQVEVAADAAVDTPAAKPAKAPKAAKAKKSTPGPKKPRVTPAHPS--- 57

Query: 255 XXXXXXXYAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAA 434
                  YAEMVSEAI ALKER GSST+AIGKFIEDKHKAHLPANFRKI+LTQIKKLVAA
Sbjct: 58  -------YAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAA 110

Query: 435 GKLTKV 452
           GKLTKV
Sbjct: 111 GKLTKV 116

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>H1_MAIZE (P23444) Histone H1|
          Length = 245

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKV 452
           YAEMVSEAIT+LKER GSS+ AI KF+EDKHKA LP NFRK++  Q+KKLVA GKLTKV
Sbjct: 52  YAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKV 110

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>H1_EUPES (Q9M5W4) Histone H1|
          Length = 229

 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 38/59 (64%), Positives = 48/59 (81%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKV 452
           + EM+S+AI+ LKER GSS  AI KF+EDKHK  LP+NFRK++L  +KKLVA+GKL KV
Sbjct: 54  FFEMISDAISTLKERTGSSQYAINKFVEDKHK-QLPSNFRKLLLFHLKKLVASGKLVKV 111

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>H1_LYCPN (P40267) Histone H1|
          Length = 202

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKV 452
           Y +M+ EA+ AL E+GGSS  A+ K++EDKHK  LPANFRKI+  Q+K   A GKL K+
Sbjct: 52  YFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKI 110

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>H1_LYCES (P37218) Histone H1|
          Length = 287

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 36/59 (61%), Positives = 46/59 (77%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKV 452
           Y EM+ +AI  LKER GSS  AI KFIE+K K+ LP+NF+K++LTQ+KK VA+ KL KV
Sbjct: 59  YFEMIKDAIVTLKERTGSSQHAITKFIEEKQKS-LPSNFKKLLLTQLKKFVASEKLVKV 116

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>H1_PEA (P08283) Histone H1 (PsH1b) (PsH1b-40)|
          Length = 265

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 35/59 (59%), Positives = 45/59 (76%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKV 452
           Y EM+ +AI +LKE+ GSS  AI KFIE+K K  LPANF+K++L  +KK VA+GKL KV
Sbjct: 65  YEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK-QLPANFKKLLLQNLKKNVASGKLIKV 122

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>H12_ARATH (P26569) Histone H1.2|
          Length = 273

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 35/59 (59%), Positives = 44/59 (74%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKV 452
           Y EM+ +AI  LKER GSS  AI KFIE+KHK+ LP  FRK++L  +K+LVA+ KL KV
Sbjct: 65  YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKS-LPPTFRKLLLVNLKRLVASEKLVKV 122

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>H11_ARATH (P26568) Histone H1.1|
          Length = 274

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 35/59 (59%), Positives = 43/59 (72%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKV 452
           Y EM+ +AI  LKER GSS  AI KFIE+K K  LP  FRK++L  +K+LVA+GKL KV
Sbjct: 65  YEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-ELPPTFRKLLLLNLKRLVASGKLVKV 122

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>H11_VOLCA (Q08864) Histone H1-I|
          Length = 260

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL-PANFRKIMLTQIKKLVAAGKLTKV 452
           Y EMV +AIT LKER GSS  A+ KFIE+K+   +   NF K +   +K  V  GKL KV
Sbjct: 61  YIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKV 120

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>H12_VOLCA (Q08865) Histone H1-II|
          Length = 240

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL-PANFRKIMLTQIKKLVAAGKLTKV 452
           Y +MV++AI +LKER GSS  A+ KFIE K+   +    F K +   +K  V  GKL KV
Sbjct: 27  YIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKV 86

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>H13_WHEAT (P15872) Histone H1.3 (Fragments)|
          Length = 31

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 30/55 (54%), Positives = 30/55 (54%)
 Frame = +3

Query: 285 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 449
           MVSEAITALKER GS                        MLTQIKKLVAAGKLTK
Sbjct: 1   MVSEAITALKERTGS------------------------MLTQIKKLVAAGKLTK 31

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>H1_ASHGO (Q75C22) Histone H1|
          Length = 225

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/58 (39%), Positives = 35/58 (60%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 449
           Y +++ EA+ +L ERGGSS  AI KFI DK+   + A F       +K+ + AG+L +
Sbjct: 27  YKDLIVEAVVSLAERGGSSRQAIKKFIRDKYA--VGAKFDGQFNLAVKRGLEAGELAQ 82

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>H1_DICDI (P54671) Histone H1|
          Length = 179

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 25/59 (42%), Positives = 33/59 (55%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKV 452
           Y  M+S AI   K+R GSS  AI K+IE  +    P  F+  +   +K+LVA G LT V
Sbjct: 26  YQVMISTAIAHYKDRTGSSQPAIIKYIEANYNV-APDTFKTQLKLALKRLVAKGTLTMV 83

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>H1B_STRPU (P15869) Histone H1-beta, late embryonic|
          Length = 211

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPAN---FRKIMLTQIKK 422
           +EMV  AITALKERGGSS  AI K+IE  +   +       ++ ++T ++K
Sbjct: 22  SEMVLAAITALKERGGSSAQAIRKYIEKNYTVDIKKQAIFIKRALITGVEK 72

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>H1E_CHITE (P40278) Histone H1E|
          Length = 237

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHK 371
           +EMV  AIT LKERGGSS +AI KF+  ++K
Sbjct: 55  SEMVVNAITTLKERGGSSLIAIKKFVAAQYK 85

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>H1E_CHIPA (P40262) Histone H1E|
          Length = 235

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHK 371
           +EMV  AIT LKERGGSS +AI KF+  ++K
Sbjct: 55  SEMVVNAITTLKERGGSSLIAIKKFVAAQYK 85

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>H5_CHICK (P02259) Histone H5|
          Length = 189

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           Y+EM++ AI A K RGGSS  +I K+I+  +K    A+ +  +   I++L+AAG L
Sbjct: 28  YSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVGHNADLQ--IKLSIRRLLAAGVL 81

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>H1_YEAST (P53551) Histone H1|
          Length = 258

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK-AHLPANFRKIMLTQIKKLVAAG 437
           Y E++ E +TALKER GSS  A+ KFI++ +      +NF       IKK V AG
Sbjct: 47  YRELIIEGLTALKERKGSSRPALKKFIKENYPIVGSASNFDLYFNNAIKKGVEAG 101



 Score = 33.9 bits (76), Expect = 0.30
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL--PANFRKIMLTQIKKLVAAGKLTK 449
           Y EM+ +++  L +  GSS + + K+++D   + L   +NF  +  + IKK V  G+L +
Sbjct: 180 YKEMILKSMPQLNDGKGSSRIVLKKYVKDTFSSKLKTSSNFDYLFNSAIKKCVENGELVQ 239

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>H1O_CHITH (Q07134) Histone H1, orphon|
          Length = 244

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHK 371
           +EMV  A+T LKERGGSS +AI KF+  ++K
Sbjct: 58  SEMVVNAVTTLKERGGSSLIAIKKFVAAQYK 88

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>H1_LYTPI (P06144) Late histone H1|
          Length = 210

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL--PANFRKIMLTQIKKLVAAGKLTKV 452
           ++MV  AITALKERGGSS  AI K+I   +K  +   A F K     +K  VA G L +V
Sbjct: 22  SQMVVAAITALKERGGSSNQAIKKYIAANYKVDINKQATFIK---RALKAGVANGTLVQV 78

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>H1_ASCIM (Q9UV33) Histone H1|
          Length = 213

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK 371
           Y EM+++AIT LKER GSS  AI KFI+   K
Sbjct: 30  YKEMLTKAITELKERNGSSRQAIKKFIQSNFK 61

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>H5_CAIMO (P06513) Histone H5|
          Length = 193

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 22/56 (39%), Positives = 35/56 (62%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           Y+EM+  AI A K RGGSS  +I K+++  +K    A+ +  +   I++L+AAG L
Sbjct: 29  YSEMIVAAIRAEKSRGGSSRQSIQKYVKSHYKVGQHADLQ--IKLSIRRLLAAGVL 82

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>H1A_OLILU (P82898) Histone H1A (Fragment)|
          Length = 47

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIML 407
           Y +MV +AI ALK+R GSS  AI K+IE   K     ++ +  L
Sbjct: 3   YYDMVKDAIVALKDRNGSSMQAIKKYIEANQKVEFKQHYLRAAL 46

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>H1G_STRPU (P07796) Histone H1-gamma, late|
          Length = 217

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 24/57 (42%), Positives = 33/57 (57%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 449
           ++MV  A+TALKERGGSST AI K+I   +   +      I    +K  VA+G L +
Sbjct: 22  SQMVVAAVTALKERGGSSTQAIKKYIAANYTVDMTKQGPFIRRALVKG-VASGALVQ 77

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>H12_GLYBA (P40264) Histone H1-II|
          Length = 232

 Score = 36.2 bits (82), Expect = 0.061
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 449
           +EMV  AI  LKERGGSS  AI KF+  ++K  +     + +   IKK +  G + K
Sbjct: 44  SEMVVNAIKTLKERGGSSLQAIKKFLVAQYKVDV-----EKLAPFIKKYLKGGAVVK 95

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>H1B_OLILU (P82899) Histone H1B (Fragment)|
          Length = 42

 Score = 36.2 bits (82), Expect = 0.061
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANF 392
           Y E++  AI ALKER GSS  AI K+I + +K      F
Sbjct: 2   YYELIKAAILALKERNGSSAQAIKKYILENNKIEFQQTF 40

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>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 36.2 bits (82), Expect = 0.061
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +2

Query: 401 HADADQEAGRRRQADQGQGLLQARQGPRSPQEAQDQGASQEEARRE 538
           HA   Q+A +  QA Q Q   QA+Q P++PQ  Q Q A Q +  ++
Sbjct: 680 HAQPPQQAQKAPQAQQAQQAQQAQQAPQAPQTPQPQQAPQVQQAQQ 725

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>H1_CANGA (Q6FJX6) Histone H1|
          Length = 229

 Score = 36.2 bits (82), Expect = 0.061
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLP--ANFRKIMLTQIKKLVAAGKLTK 449
           Y EM+   + ++    G+S +A+ KFI+DK+  ++    NF  ++   IKK V +G+L++
Sbjct: 149 YREMILTGVLSMNNGKGASRMALKKFIKDKYPTNVEKVVNFDYLVNNAIKKGVESGELSQ 208



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKH 368
           Y  ++ E + AL    G+S VA+ K+I+D H
Sbjct: 14  YKNLIIEGLKALNNGKGASRVALKKYIKDNH 44

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>H5_ANSAN (P02258) Histone H5|
          Length = 193

 Score = 35.8 bits (81), Expect = 0.080
 Identities = 20/56 (35%), Positives = 34/56 (60%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           Y+EM++ AI A K RGGSS  +I K+++  +K    A+ +  +   I++L+  G L
Sbjct: 29  YSEMIAAAIRADKSRGGSSRQSIQKYVKSHYKVGQHADLQ--IKLAIRRLLTTGVL 82

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>H13_GLYBA (P40265) Histone H1-III|
          Length = 228

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHK 371
           +EMV  AI  LKERGGSS  AI KF+  ++K
Sbjct: 44  SEMVVNAIKTLKERGGSSLQAIKKFLAAQYK 74

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>H15_CAEEL (O01833) Histone H1.5 (Histone H1-like protein 5)|
          Length = 224

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 9/56 (16%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKH---------KAHLPANFRKIMLTQI 416
           +  M++EA++ LK+R GSS VAI KFI  K+          AHL +  +K +++++
Sbjct: 40  FINMITEAVSNLKDRKGSSRVAIFKFITAKYTLGDQVNKTNAHLRSALKKGVVSKV 95

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>H1B_CHITE (P40276) Histone H1B|
          Length = 232

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           +EMV  A+  LKERGGSS  AI KF+  ++K  +       +   +K  V  G+L
Sbjct: 44  SEMVVNAVKTLKERGGSSLQAIKKFLVAQYKVDVD-KLAPFIKKYLKSAVEKGQL 97

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>H1_DROHY (P17268) Histone H1|
          Length = 249

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +3

Query: 282 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           +MV  +I  LKERGGSS +AI K+I   +K          +   +K  VA GKL
Sbjct: 51  QMVDASIQNLKERGGSSLLAIKKYISATYKCD-AQKLAPFIKKYLKNSVANGKL 103

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>H13_DROVI (Q94972) Histone H1.3|
          Length = 250

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +3

Query: 282 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           +MV  +I  LKERGGSS +AI K+I   +K          +   +K  VA GKL
Sbjct: 50  QMVDASIKNLKERGGSSLLAIKKYIGATYKCD-AQKLAPFIKKYLKNAVANGKL 102

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>H12_DROVI (Q94555) Histone H1.2|
          Length = 250

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +3

Query: 282 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           +MV  +I  LKERGGSS +AI K+I   +K          +   +K  VA GKL
Sbjct: 50  QMVDASIKNLKERGGSSLLAIKKYIGATYKCD-AQKLAPFIKKYLKNAVANGKL 102

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>H11_WHEAT (P15871) Histone H1.1 (Fragment)|
          Length = 25

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 18/22 (81%), Positives = 18/22 (81%)
 Frame = +3

Query: 285 MVSEAITALKERGGSSTVAIGK 350
           MVSEAI ALKER GSS  AIGK
Sbjct: 1   MVSEAIAALKEREGSSEFAIGK 22

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>H1_TIGCA (P35060) Histone H1|
          Length = 181

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 24/55 (43%), Positives = 29/55 (52%)
 Frame = +3

Query: 285 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 449
           MV  AI ALKER GSS  AI K+I   +K  +  N   I    +K LV   KL +
Sbjct: 27  MVMAAIKALKERNGSSLPAIKKYIAANYKVDVVKNAHFIK-KALKSLVEKKKLVQ 80

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>H1C_CHITE (P40277) Histone H1C|
          Length = 221

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 19/77 (24%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKA-----------HLPANFRKIMLTQIK-- 419
           +EMV  A+  LKERGGSS  AI KF+  ++K            +L +   K  L Q K  
Sbjct: 43  SEMVFNAVKTLKERGGSSLQAIKKFLIAQYKVDVDKLDTFIKKYLKSAVEKGQLLQTKGK 102

Query: 420 ------KLVAAGKLTKV 452
                 KL AA K  KV
Sbjct: 103 GALGSFKLPAAAKKEKV 119

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>H5A_XENLA (P22844) Histone H5A (XLH5A) (H1D) (H1-SA)|
          Length = 196

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 20/56 (35%), Positives = 33/56 (58%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           Y++M+  A+ A K R GSS  +I K+I++ +K  +  N    +   IK+LV +G L
Sbjct: 28  YSDMILAAVQAEKSRSGSSRQSIQKYIKNHYK--VGENADSQIKLSIKRLVTSGAL 81

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>H1A_CHITE (P40275) Histone H1A|
          Length = 232

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           ++MV  A+  LKERGGSS  AI KF+  ++K  +       +   +K  V  G+L
Sbjct: 44  SDMVVNAVKTLKERGGSSVQAIKKFLVAQYKVDVD-KLSPFIKKYLKSAVEKGQL 97

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>H1A_PLADU (P06894) Histone H1A, sperm|
          Length = 121

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHK---AHLPANFRKIMLTQIKKLVAAG 437
           A MV  AI  LKER GSS VAI K+I   ++   A L    RK +   +K+    G
Sbjct: 15  ATMVVTAILGLKERKGSSMVAIKKYIAANYRVDVARLAPFIRKFIRKAVKQTKGTG 70

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>H1_CHITH (P21895) Histone H1|
          Length = 231

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 19/77 (24%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKA-----------HLPANFRKIMLTQIK-- 419
           ++M+  AI  LKERGGSS  AI KF+  ++K            +L +   K  L Q K  
Sbjct: 43  SDMIVNAIKTLKERGGSSVQAIKKFLVAQYKVDTDKLSPFIKKYLKSAVEKGQLLQTKGK 102

Query: 420 ------KLVAAGKLTKV 452
                 KL AA K  KV
Sbjct: 103 GASGSFKLPAAAKKEKV 119

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>H5B_XENLA (P22845) Histone H5B (XLH5B) (H1E) (H1-SB)|
          Length = 194

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 19/56 (33%), Positives = 33/56 (58%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           Y++M+ +A+ A K R GSS  +I K+I++ +   +  N    +   IK+LV +G L
Sbjct: 26  YSDMILDAVQAKKSRSGSSRQSIQKYIKNNYT--VGENADSQIKLSIKRLVTSGTL 79

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>H16_CAEEL (O16277) Putative histone H1.6 (Histone H1-like protein 6)|
          Length = 189

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKI---MLTQIKKLVAAGKLT 446
           +  MV+ AI++LKER GSS +AI K+I   +K  L    +KI   + + +KK VA+  L 
Sbjct: 37  FINMVTAAISSLKERKGSSKIAILKYITANYK--LGDQVKKINSNLRSALKKGVASKALV 94

Query: 447 K 449
           +
Sbjct: 95  Q 95

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>H1E_STRPU (P19375) Histone H1, early embryonic|
          Length = 205

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 23/57 (40%), Positives = 29/57 (50%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 449
           AEMV+ AIT LK+R GSS  AI K+I       +      I    +K  V  GKL +
Sbjct: 22  AEMVATAITELKDRNGSSLQAIKKYIATNFDVQMDRQLLFIK-RALKSGVEKGKLVQ 77

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>H11_GLYSA (P40266) Histone H1-I|
          Length = 233

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL 380
           +EMV  A+  L E+GGSS +AI KF+   +K  +
Sbjct: 56  SEMVVNALKTLNEKGGSSVIAIKKFLVATYKVEI 89

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>H11_GLYBA (P40263) Histone H1-I|
          Length = 233

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL 380
           +EMV  A+  L E+GGSS +AI KF+   +K  +
Sbjct: 56  SEMVVNALKTLNEKGGSSVIAIKKFLVATYKVEI 89

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>H10_RAT (P43278) Histone H1.0 (H1(0)) (Histone H1')|
          Length = 193

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           Y++M+  AI A K R GSS  +I K+I+  +K  +  N    +   IK+LV  G L
Sbjct: 27  YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYK--VGENADSQIKLSIKRLVTTGVL 80

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>H10_MOUSE (P10922) Histone H1' (H1.0) (H1(0))|
          Length = 193

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           Y++M+  AI A K R GSS  +I K+I+  +K  +  N    +   IK+LV  G L
Sbjct: 27  YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYK--VGENADSQIKLSIKRLVTTGVL 80

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>H10_HUMAN (P07305) Histone H1.0 (H1(0)) (Histone H1')|
          Length = 193

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           Y++M+  AI A K R GSS  +I K+I+  +K  +  N    +   IK+LV  G L
Sbjct: 27  YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYK--VGENADSQIKLSIKRLVTTGVL 80

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>H1_DROME (P02255) Histone H1|
          Length = 256

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = +3

Query: 282 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKL 443
           +MV  +I  LKERGGSS +AI K+I   +K          +   +K  V  GKL
Sbjct: 51  QMVDASIKNLKERGGSSLLAIKKYITATYKCD-AQKLAPFIKKYLKSAVVNGKL 103

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>H12_CAEEL (P15796) Histone H1.2 (Histone H1-like protein 2)|
          Length = 190

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK 371
           +  MV+ AI++LKER GSS +AI K+I   +K
Sbjct: 40  FINMVTAAISSLKERKGSSKIAILKYITANYK 71

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>I15RA_MOUSE (Q60819) Interleukin-15 receptor alpha chain precursor|
           (IL-15R-alpha) (IL-15RA)
          Length = 263

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 15  PASPSPPAKDTPARSPRSPAAMSTDAA 95
           P SPSP AK+  A SP+S  AM+T+ A
Sbjct: 120 PESPSPSAKEPEAFSPKSDTAMTTETA 146

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>H1_NEUCR (Q8J0U2) Histone H1|
          Length = 236

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFI 356
           Y +M+++AI ALK+R GSS  A+ K++
Sbjct: 40  YLDMITDAIVALKDRAGSSRQALKKYV 66

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>H1L5_ENSMI (P27203) Histone H1-like protein EM5 (Fragment)|
          Length = 36

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +3

Query: 285 MVSEAITALKERGGSSTVAIGKFIEDKHK 371
           M++ A+ ALKERGGSS  AI K+I+   K
Sbjct: 1   MITAAVGALKERGGSSRQAILKYIQANFK 29

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>H11_CAEEL (P10771) Histone H1.1|
          Length = 207

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK 371
           Y  M+ EAI  LK+R G+S  AI KFI   +K
Sbjct: 40  YINMIKEAIKQLKDRKGASKQAILKFISQNYK 71

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>H1_PARAN (P02256) Histone H1, gonadal|
          Length = 248

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
 Frame = +3

Query: 282 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFR---KIMLTQIKKL----VAAGK 440
           EMV  AITA+KER GSS   I        K+++ AN+R    ++   +++     VA+G 
Sbjct: 47  EMVQAAITAMKERKGSSAAKI--------KSYMAANYRVDMNVLAPHVRRALRNGVASGA 98

Query: 441 LTKV 452
           L +V
Sbjct: 99  LKQV 102

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>H13_CAEEL (Q19743) Histone H1.3 (Histone H1-like protein 3)|
          Length = 207

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFI 356
           Y  MV+ AI  LKER GSS +AI K+I
Sbjct: 40  YINMVTAAINGLKERKGSSKIAILKYI 66

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>KCNN1_RAT (P70606) Small conductance calcium-activated potassium channel|
           protein 1 (SK1)
          Length = 536

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +2

Query: 413 DQEAGRRRQADQGQGL-LQARQGPRSPQEAQDQGASQEEARREEE 544
           D EAGR RQ  QG GL + A+  P     +  +G SQ +   EEE
Sbjct: 27  DPEAGRPRQPTQGPGLQMMAKGQPAGLSPSGPRGHSQAQEEEEEE 71

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>H1_EMENI (Q9P8F8) Histone H1|
          Length = 200

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 20/54 (37%), Positives = 31/54 (57%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAG 437
           Y +M+ +AI  LKER GSS  +I K++   +K   PA+ +    +Q  K + AG
Sbjct: 22  YRDMIKDAILNLKERNGSSRQSIKKYVLANNKL-APAS-QNAFDSQFNKAIKAG 73

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>TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein tatB homolog|
          Length = 141

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 137
           +P+ P+PP   TPA  P   AA    AA+  P P  E   +P
Sbjct: 100 APSVPTPPPTSTPAVPPADAAAPPAVAASTPPSPPSETPRNP 141



 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +3

Query: 6   QLSPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVV 143
           Q  P    PPA ++PA S  +P   ST A     VP  +A A P V
Sbjct: 85  QNPPQETPPPAAESPAPSVPTPPPTSTPA-----VPPADAAAPPAV 125

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>H11_DROVI (Q24704) Histone H1.1|
          Length = 250

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = +3

Query: 282 EMVSEAITALKERGGSSTVAIGKFIEDKHK 371
           +MV  +I  LKERGGSS +AI K+I   +K
Sbjct: 50  QMVDASIKNLKERGGSSLLAIKKYIGATYK 79

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>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)|
          Length = 1287

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
 Frame = +3

Query: 15  PASPSPPA-------KDTP-ARSPRSPAAMSTDAAADIPVPQVEATADPVVE 146
           PASP+PPA       + TP A SPR P + ++ AA DI  P   +    V+E
Sbjct: 758 PASPAPPAPASAFPPRVTPQAISPRGPTSPASPAALDISEPLAVSVPPAVLE 809

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>H1_ECHCR (P02257) Histone H1, gonadal (Fragment)|
          Length = 171

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +3

Query: 282 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPA---NFRKIMLTQIK 419
           +M++ AI A KER GSS   I  +I  K++  + A   + R+ +  Q+K
Sbjct: 43  DMITAAIAAQKERRGSSVAKIQSYIAAKYRCDINALNPHIRRALKNQVK 91

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>H1D_STRPU (P15870) Histone H1-delta|
          Length = 185

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 19/59 (32%), Positives = 34/59 (57%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKV 452
           Y++M++ A+ +LKE+ GSS  AI K+++        AN    +   +K+ V +G+L  V
Sbjct: 36  YSDMIASALESLKEKKGSSRQAILKYVKANFTVGDNANVH--IKQALKRGVTSGQLRHV 92

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>K1949_PIG (Q767M0) Protein KIAA1949 homolog|
          Length = 618

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 416 QEAGRRRQADQGQGLLQARQGPRSPQEAQDQGASQEEARRE 538
           Q+      A++  GLL+AR+   SP E +DQ   + E+R E
Sbjct: 108 QQRSEELLAERRPGLLEAREWRSSPGEMRDQSPKERESREE 148

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>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 15   PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATAD 134
            P SP  PA   PA+ PR+ AA +  AAA    P+  +  D
Sbjct: 1328 PPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGD 1367

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>BASP_MOUSE (Q91XV3) Brain acid soluble protein 1 (BASP1 protein) (Neuronal|
           axonal membrane protein NAP-22) (22 kDa neuronal
           tissue-enriched acidic protein)
          Length = 225

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 146
           S A P+P +K+TPA      A+ +  +AA  P P   A A+P  E
Sbjct: 171 SSAEPAPSSKETPA------ASEAPSSAAKAPAPAAPAAAEPQAE 209

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>LIPA3_HUMAN (O75145) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-3)
           (PTPRF-interacting protein alpha-3)
          Length = 1194

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 18  ASPSPPAK--DTPARSPRSPAAMSTDAAADIPVPQVEA 125
           ASPSPP+    TP  +P SPA   TD A  +P  +  A
Sbjct: 665 ASPSPPSSGHSTPRLAPPSPAREGTDKANHVPKEEAGA 702

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 137
           SPA PSPP+   P+ SP +P + S  + A  P+P   A   P
Sbjct: 115 SPAPPSPPSPAPPSPSPPAPPSPSPPSPAP-PLPPSPAPPSP 155



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 137
           SPA PSPP+   P+ +P SPA  S   A   P P   A   P
Sbjct: 72  SPAPPSPPSPAPPSPAPPSPAPPS--PAPPSPAPPSPAPPSP 111



 Score = 29.6 bits (65), Expect = 5.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVP 113
           SP+ P+PP+   P+ +P SPA  S    A  P P
Sbjct: 235 SPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPP 268



 Score = 29.6 bits (65), Expect = 5.7
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 12  SPASPSPPAKDTPA-RSPRSPAAMSTDAAADIPVPQVEATADPV 140
           +P SP+PP   +PA  SP SPA  S  + A  P P   A   PV
Sbjct: 203 APPSPAPPVPPSPAPPSPPSPAPPSPPSPAP-PSPSPPAPPSPV 245



 Score = 29.6 bits (65), Expect = 5.7
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPA-AMSTDAAADIPVPQVEATADPVV 143
           +P SPSPPA  +P  SP SPA  +    A   P P V  +  P V
Sbjct: 125 APPSPSPPAPPSP--SPPSPAPPLPPSPAPPSPSPPVPPSPSPPV 167



 Score = 29.6 bits (65), Expect = 5.7
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 137
           +P SP+PP+   P+ +P SPA  S  + A  P P   A   P
Sbjct: 97  APPSPAPPSPAPPSPAPPSPAPPSPPSPAP-PSPSPPAPPSP 137



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 15  PASPSPPAKDTPA-RSPRSPAAMS-TDAAADIPVPQVEATADP 137
           P SP+PP+  +PA  SP SPA  S +  A   PVP   A   P
Sbjct: 212 PPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSP 254



 Score = 28.9 bits (63), Expect = 9.7
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 15  PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 137
           P  P+PP+   P+  P SPA +    A   P P    +  P
Sbjct: 300 PTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAP 340



 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 137
           +P SP+PP+   P+ +P SPA  S   A   P P   A   P
Sbjct: 82  APPSPAPPSPAPPSPAPPSPAPPS--PAPPSPAPPSPAPPSP 121

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>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing|
           mediator of retinoic acid and thyroid hormone receptor)
           (SMRT) (SMRTe) (Thyroid-,
           retinoic-acid-receptor-associated corepressor) (T3
           receptor-associating factor) (TRAC) (CTG repeat p
          Length = 2517

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 428 RRRQADQGQGLLQARQGPRSPQEAQDQGASQEEARREEE 544
           +++Q  Q Q   Q +  PRS QE +D+   ++EA +EEE
Sbjct: 496 QQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEE 534



 Score = 28.9 bits (63), Expect = 9.7
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 15  PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVV 143
           P  P+PP + + A    +PA+ +T A    P P   +   PVV
Sbjct: 780 PGPPTPPRRTSRAPIEPTPASEATGAPTPPPAPPSPSAPPPVV 822

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>H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)|
          Length = 252

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPAN 389
           +  MV+EAI+++K+R G S  AI K+I  K+     AN
Sbjct: 54  FINMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQAN 91

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>H1L2_OSTED (Q86QI0) Sperm-specific H1/protamine-like protein type 2 precursor|
           [Contains: Sperm-specific protein OE2 (Sperm-specific
           linker histone H1-like protein OE2); Sperm-specific
           protein OE3 (Protamine-like OS3)] (Fragment)
          Length = 126

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = +3

Query: 285 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKV 452
           M+  AITA+K R GSS  AI K+I   +K    ++    M     K + +G L ++
Sbjct: 12  MIVAAITAMKNRKGSSVQAIRKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVRL 67

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>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 24  PSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 137
           PSPPA   PA +PR  A+ ++ +AA  P P  E    P
Sbjct: 418 PSPPA---PAAAPRPSASSASSSAAASPAPAPEPARPP 452

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>H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific|
           linker histone H1-like protein) [Contains:
           Sperm-specific protein PHI-3 (Protamine-like protein
           PHI-3) (PL-IV)]
          Length = 202

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 285 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 449
           M+  AITA+K R GSS  AI K+I   +K    ++    M     K + +G L +
Sbjct: 47  MIVAAITAMKNRKGSSVQAIRKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVR 101

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>H1L1_OSTED (Q86QH9) Sperm-specific H1/protamine-like protein type 1 precursor|
           [Contains: Sperm-specific protein OE1 (Sperm-specific
           linker histone H1-like protein OE1); Sperm-specific
           protein OE3 (Protamine-like OS3)]
          Length = 202

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 285 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 449
           M+  AITA+K R GSS  AI K+I   +K    ++    M     K + +G L +
Sbjct: 48  MIVAAITAMKNRKGSSVQAIRKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVR 102

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>CCD71_RAT (Q4V7C4) Coiled-coil domain-containing protein 71|
          Length = 436

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 3   TQLSPASPSPPAKDTPARSPRSPAAMSTDAAADIPVP 113
           T+L   + +PPA   PAR+P++  ++ T     +PVP
Sbjct: 84  TKLQARTINPPATSLPARAPQTAKSVPTGQTTLLPVP 120

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>SECD_MYCTU (Q50634) Protein-export membrane protein secD|
          Length = 573

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATA-DP 137
           +PASP P A+  P     +P+   T  A+  P P  EA A DP
Sbjct: 158 APASPQPGAQPRPYPQDPAPSPNPTSPASPPPAPPAEAPATDP 200

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>PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 239

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 146
           S  +  PPAK TPAR+   PA  ++ A A  P+P   +    +V+
Sbjct: 193 STGTGRPPAK-TPARAEEPPAPAASPAPATAPLPDARSPLQKLVD 236

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>ZAN_MOUSE (O88799) Zonadhesin precursor|
          Length = 5376

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 3   TQLSPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 146
           T +SP   S P ++T +    + +   T    ++P+  +EATA P  E
Sbjct: 724 TNVSPEETSVPTEETISTEVTTVSPEETTVPTEVPIVLIEATASPTGE 771

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>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)|
          Length = 926

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 9   LSPASPSPPAKDTPARSPRSP-AAMSTDAAADIPVPQVEATA 131
           +SPA+P  PA   P  +P SP AA+   AAA +    V  TA
Sbjct: 746 ISPAAPVAPAAVVPPAAPVSPAAAVQIPAAASLTPATVSPTA 787

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>MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupled receptor 50)|
           (H9)
          Length = 613

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 9   LSPASPSPPAKDTPARSPRSPAA--MSTDAAADIPVPQVEATA 131
           +S  S  P +  +PA  P  PAA  + +D  AD+P P V  T+
Sbjct: 550 VSDDSDLPESASSPAAGPTKPAASQLESDTIADLPDPTVVTTS 592

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>H1B_PLADU (P06895) Histone H1B, sperm|
          Length = 119

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = +3

Query: 279 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 449
           A  V  AI  LK+R GSS VAI K++   +   + A     +   ++K VA G L +
Sbjct: 13  ATAVVAAILGLKDRKGSSMVAIKKYLAANYNVDV-ARLGPFIRRFVRKAVAEGMLVQ 68

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>MPA5B_LOLPR (Q40237) Major pollen allergen Lol p 5b precursor (Lol p Vb)|
          Length = 339

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATAD 134
           +PA+P+ PA    A +P +PA  +T AA    VP  +AT +
Sbjct: 31  APATPATPAAPATAATPATPATPATPAA----VPSGKATTE 67

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>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 361

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 18  ASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEA 125
           ASP+ PA   PA +  +PA + T A A  P P   A
Sbjct: 2   ASPAVPANVPPATAAAAPAPVVTAAPASAPTPSTPA 37

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>CDT1_MOUSE (Q8R4E9) DNA replication factor Cdt1 (Double parked homolog) (DUP)|
           (Retroviral insertion site 2 protein)
          Length = 557

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPAAMS 83
           SPA PSPPA  +P   P SP   S
Sbjct: 84  SPAEPSPPADPSPPADPGSPVCPS 107

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>IF2_PELLD (Q3B1Z8) Translation initiation factor IF-2|
          Length = 915

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 21  SPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 146
           SP+PP  + P R+   PA +   AA + P P    T  P  E
Sbjct: 101 SPAPPVHEPPVRAAAQPAPVPV-AAGEAPSPLAPETPAPATE 141



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 9   LSPASPSPPAKDTPARSPRS-PAAMSTDAAADIPVPQVEATADPVVE 146
           L+P +P+P  +  PA +P   PAA     A   P+P  E   +PV E
Sbjct: 131 LAPETPAPATESAPAVAPAGVPAAEPVSEALSAPLP--EPVPEPVPE 175

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>ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)|
           (Unc-51-like kinase 1)
          Length = 1050

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 21  SPSPPAKDTPARSPRSPAAMSTDAAADIPVP 113
           SPSPP   +P+ S R+    S+   A +P+P
Sbjct: 403 SPSPPCSSSPSPSGRAGPFSSSRCGASVPIP 433

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>SCG1_MOUSE (P16014) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB)
          Length = 677

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 407 DADQEAGRRRQADQGQGLLQARQGPRSPQEAQDQGASQEEARREEE 544
           + +++   R Q+ Q  G    RQ    PQE  DQ  SQEE++  EE
Sbjct: 222 ELEEKTHSREQSSQESGEETRRQ--EKPQELTDQDQSQEESQEGEE 265

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>PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)|
          Length = 2135

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +3

Query: 21  SPSPPAKDTPARS-PRSPAAMSTDAAADIPV-PQVEATA 131
           SP PPA+  P+ S P +P A++T A   +PV P   +TA
Sbjct: 681 SPDPPARGGPSPSPPTAPKALATPAPDTLPVEPGAPSTA 719

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>HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)|
          Length = 176

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/57 (31%), Positives = 32/57 (56%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLT 446
           Y EM+ + + AL E  GS+  AI K+IE  +   LP     ++ + + K+  +G+L+
Sbjct: 15  YPEMIVKTLEALNEPNGSNKSAISKYIETTY-GELPD--ATVLGSHLNKMKDSGELS 68

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>H103_CHICK (P08285) Histone H1.03|
          Length = 223

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = +3

Query: 33  PAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 137
           P K TPA  P+ PAA    AAA  P   V     P
Sbjct: 122 PKKKTPAAKPKKPAAKKPAAAAKKPKKAVAVKKSP 156

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>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum|
           protein MSE55)
          Length = 391

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 27  SPPAKDTPARSPRSPAAMSTDAAADIPVPQVEAT 128
           +PPA   PA +P +PAA  T  AA+ P P   +T
Sbjct: 251 NPPA---PAANPSAPAATPTGPAANPPAPAASST 281

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>IF2_METCA (Q609C0) Translation initiation factor IF-2|
          Length = 868

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +2

Query: 410 ADQEAGRRRQADQGQGLLQARQGPRSPQEAQDQGASQEEARREEE 544
           ++ E  RR   +Q Q  L  ++  R  +E   + A++EE RR+EE
Sbjct: 114 SEAEQARRALEEQQQRELAEQEARRQQEEMLREQAAEEERRRQEE 158

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>TR10C_HUMAN (O14798) Tumor necrosis factor receptor superfamily member 10C|
           precursor (Decoy receptor 1) (DcR1) (Decoy TRAIL
           receptor without death domain) (TNF-related
           apoptosis-inducing ligand receptor 3) (TRAIL receptor 3)
           (TRAIL-R3) (Trail receptor wi
          Length = 259

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSPRSPA-----AMSTDAAADIPVPQVEATADP 137
           SP +P+P A++T   SP +PA      M+T      P  +   T  P
Sbjct: 186 SPGTPAPAAEETMTTSPGTPAPAAEETMTTSPGTPAPAAEETMTTSP 232

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>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel|
           [Contains: Glutamic acid-rich protein (GARP);
           Cyclic-nucleotide-gated cation channel 4 (CNG channel 4)
           (CNG-4) (Cyclic nucleotide-gated cation channel
           modulatory subunit)]
          Length = 1394

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +2

Query: 407 DADQEAGRRRQADQGQGLLQARQGPRSPQEAQDQGASQEEARREEE 544
           + + E GR ++ ++G+G  +   G +  +E + +G  + E R EEE
Sbjct: 415 EKEDEEGREKEEEEGRGKEEEEGGEK--EEEEGRGKEEVEGREEEE 458

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>HNRPU_HUMAN (Q00839) Heterogenous nuclear ribonucleoprotein U (hnRNP U)|
           (Scaffold attachment factor A) (SAF-A) (p120) (pp120)
          Length = 824

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
 Frame = +2

Query: 413 DQEAGRRRQADQGQGLLQ------ARQGPRSPQEAQDQGASQEEARREEE 544
           D+EAG R   + G G L        R G    QEA   G  +EE   EEE
Sbjct: 44  DEEAGGRPAMEPGNGSLDLGGDSAGRSGAGLEQEAAAGGDEEEEEEEEEE 93

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>PEX14_HUMAN (O75381) Peroxisomal membrane protein PEX14 (Peroxin-14)|
           (Peroxisomal membrane anchor protein PEX14) (PTS1
           receptor docking protein)
          Length = 377

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +3

Query: 12  SPASPSPPAKDTPAR--SPRSPAAMSTDAAADI-PVPQVEATADP 137
           SP++P  P+   P +  SP SPAA++  +++DI PV     ++ P
Sbjct: 232 SPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSP 276

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>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)|
          Length = 2414

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 6   QLSPASPSPPAKDTPARSPRSPAAMSTDAAADIPVP 113
           Q+ P+ P+ P+ D P + PRS        AA +P P
Sbjct: 896 QVQPSLPAAPSADQPQQQPRS----QQSTAASVPTP 927

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>LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I)|
          Length = 323

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 15  PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQ 116
           P SP PP+   P+ SP  P A        +P PQ
Sbjct: 179 PPSPPPPSPPPPSPSPPPPPASPPPPPPALPYPQ 212

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>Y1583_MYCTU (O06607) Hypothetical protein Rv1583c/MT3573.2|
          Length = 132

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 18  ASPSPPAKDTPARSPRSPAAMSTDAAAD 101
           A  SPP +  PA   R+PA ++T ++AD
Sbjct: 5   AGGSPPTRRCPATEDRAPATVATPSSAD 32

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>H1X_CAEEL (Q18336) Histone H1.X (Histone H1-like protein 1)|
          Length = 232

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +3

Query: 276 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKI---MLTQIKKLVAAGKL 443
           Y +M+  AI A+    GSS  AI K+I   +  H+  N  K+   + + +KK V +G +
Sbjct: 40  YMDMIKGAIQAIDNGTGSSKAAILKYIAQNY--HVGENLPKVNNHLRSVLKKAVDSGDI 96

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>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
          Length = 925

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +3

Query: 12  SPASPSPPAKDTPARSP--RSPAAMSTDAAADIPVPQVE 122
           SP + SP AK   A+SP  +SP A S  A +  P   VE
Sbjct: 659 SPTAKSPEAKSPEAKSPTAKSPTAKSPAAKSPAPKSPVE 697

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>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
            SWI2/SNF2-related protein) (Domino homolog) (mDomino)
          Length = 3072

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +3

Query: 15   PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPV 140
            P  P PP     A S ++PA     A    P PQV+A   PV
Sbjct: 2484 PQQPPPPVPQPQAASSQTPAGQP--AVQPQPQPQVQAQPQPV 2523


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,070,172
Number of Sequences: 219361
Number of extensions: 478855
Number of successful extensions: 5158
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 4009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5042
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result