Clone Name | bart13c03 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK071558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J06, full insert sequence Length = 1668 Score = 488 bits (246), Expect = e-134 Identities = 416/474 (87%) Strand = Plus / Plus Query: 75 gaagcacttcaagtacatcgtcctcggcggcggcgtctcagggggctacgcggcgcggga 134 |||||||||||||||| || ||||||||||||||||| ||| ||| || ||||| ||||| Sbjct: 231 gaagcacttcaagtacgtcatcctcggcggcggcgtcgcagcgggatatgcggcacggga 290 Query: 135 gttcgccaagcagggcgtgcagccnggggagctcgccatcatctccnaggaggccgtggc 194 ||||||||||||||| || |||| ||||||||||||||||||||| ||||||||||||| Sbjct: 291 gttcgccaagcagggtgttaagccaggggagctcgccatcatctccaaggaggccgtggc 350 Query: 195 accttacgagcgccctgccctcagcaaggcgtacctgttccctcagagtcctgcaaggtt 254 ||||| ||||||||||| |||||||||| ||||| || ||||||| | ||||||| | Sbjct: 351 tccttatgagcgccctgctctcagcaagggatacctctttcctcagaatgctgcaagact 410 Query: 255 gccaggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactc 314 |||||||| |||||||| || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 411 cccaggatttcatgtgtgtgtcggcagtggaggagagaggcttttgcccgaatggtactc 470 Query: 315 agagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccna 374 ||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| | Sbjct: 471 agagaaaggcattgagttgatcctgagcactgaaattgtcaaagctgatcttgcctccaa 530 Query: 375 gaccctgactagttcagctggagcaacctttacatatgagattttgctaattgctactgg 434 ||| |||||||| ||| |||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 531 gactttgactagtgcagttggagcaacctttacatatgagattttgatcattgcaactgg 590 Query: 435 ctcctcggtcattaagctctctgattttggcactcaaggagctgattccaacaacattct 494 |||||| ||||| ||||| || |||||||| ||||||||||||||||||||||||||| | Sbjct: 591 ctcctcagtcatcaagctatcagattttggtactcaaggagctgattccaacaacatttt 650 Query: 495 gtacctaagggaagttgacgacgcggacaagctgtatgcagccatccnagcaaa 548 || ||||||||||| || || || ||||||||| |||||| |||| |||||| Sbjct: 651 atatctaagggaagtagatgatgctgacaagctggttgcagctatccaagcaaa 704
>dbj|D85764.1| Oryza sativa (japonica cultivar-group) mRNA for cytosolic monodehydroascorbate reductase, complete cds Length = 1570 Score = 488 bits (246), Expect = e-134 Identities = 416/474 (87%) Strand = Plus / Plus Query: 75 gaagcacttcaagtacatcgtcctcggcggcggcgtctcagggggctacgcggcgcggga 134 |||||||||||||||| || ||||||||||||||||| ||| ||| || ||||| ||||| Sbjct: 109 gaagcacttcaagtacgtcatcctcggcggcggcgtcgcagcgggatatgcggcacggga 168 Query: 135 gttcgccaagcagggcgtgcagccnggggagctcgccatcatctccnaggaggccgtggc 194 ||||||||||||||| || |||| ||||||||||||||||||||| ||||||||||||| Sbjct: 169 gttcgccaagcagggtgttaagccaggggagctcgccatcatctccaaggaggccgtggc 228 Query: 195 accttacgagcgccctgccctcagcaaggcgtacctgttccctcagagtcctgcaaggtt 254 ||||| ||||||||||| |||||||||| ||||| || ||||||| | ||||||| | Sbjct: 229 tccttatgagcgccctgctctcagcaagggatacctctttcctcagaatgctgcaagact 288 Query: 255 gccaggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactc 314 |||||||| |||||||| || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 289 cccaggatttcatgtgtgtgtcggcagtggaggagagaggcttttgcccgaatggtactc 348 Query: 315 agagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccna 374 ||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| | Sbjct: 349 agagaaaggcattgagttgatcctgagcactgaaattgtcaaagctgatcttgcctccaa 408 Query: 375 gaccctgactagttcagctggagcaacctttacatatgagattttgctaattgctactgg 434 ||| |||||||| ||| |||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 409 gactttgactagtgcagttggagcaacctttacatatgagattttgatcattgcaactgg 468 Query: 435 ctcctcggtcattaagctctctgattttggcactcaaggagctgattccaacaacattct 494 |||||| ||||| ||||| || |||||||| ||||||||||||||||||||||||||| | Sbjct: 469 ctcctcagtcatcaagctatcagattttggtactcaaggagctgattccaacaacatttt 528 Query: 495 gtacctaagggaagttgacgacgcggacaagctgtatgcagccatccnagcaaa 548 || ||||||||||| || || || ||||||||| |||||| |||| |||||| Sbjct: 529 atatctaagggaagtagatgatgctgacaagctggttgcagctatccaagcaaa 582
>gb|AY103967.1| Zea mays PCO066827 mRNA sequence Length = 1675 Score = 414 bits (209), Expect = e-112 Identities = 401/466 (86%) Strand = Plus / Plus Query: 76 aagcacttcaagtacatcgtcctcggcggcggcgtctcagggggctacgcggcgcgggag 135 ||||||||||||||| || ||||||||||||||||| | | ||| ||||||||||||||| Sbjct: 146 aagcacttcaagtacgtcatcctcggcggcggcgtcgcggcggggtacgcggcgcgggag 205 Query: 136 ttcgccaagcagggcgtgcagccnggggagctcgccatcatctccnaggaggccgtggca 195 |||||||||||||| || |||| |||||||| || ||||||||| ||||||| ||||| Sbjct: 206 ttcgccaagcagggagttaagcctggggagcttgcaatcatctccaaggaggctgtggct 265 Query: 196 ccttacgagcgccctgccctcagcaaggcgtacctgttccctcagagtcctgcaaggttg 255 ||||||||||| |||||||| ||||| | ||||| || ||| || | ||||||| | Sbjct: 266 ccttacgagcgtcctgccctaagcaaaggttacctctttcctacgaatgctgcaagactc 325 Query: 256 ccaggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactca 315 |||||||| |||| || ||||||||||| || |||| ||| |||||||| ||||||||| Sbjct: 326 ccaggattttatgtatgtgtgggaagtggtggagagaagctattgcctgagtggtactca 385 Query: 316 gagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccnag 375 |||||||| |||||||| ||||| || || ||||||||||||||||||||| || || || Sbjct: 386 gagaaaggcattgagctgatccttagtacagaaattgtcaaagctgatctttccaccaag 445 Query: 376 accctgactagttcagctggagcaacctttacatatgagattttgctaattgctactggc 435 || ||||||||| |||||||||||| ||||||||||||||| ||||| |||||||||||| Sbjct: 446 actctgactagtgcagctggagcaaactttacatatgagatcttgctcattgctactggc 505 Query: 436 tcctcggtcattaagctctctgattttggcactcaaggagctgattccaacaacattctg 495 ||||||||||| |||||| | ||||||||||| |||||||||||||| ||||||||||| Sbjct: 506 tcctcggtcataaagctcaccgattttggcacacaaggagctgattctaacaacattcta 565 Query: 496 tacctaagggaagttgacgacgcggacaagctgtatgcagccatcc 541 || ||||||||| |||| || || ||||||||| |||||| |||| Sbjct: 566 tatctaagggaaattgatgatgctgacaagctggttgcagctatcc 611
>ref|XM_483751.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1721 Score = 289 bits (146), Expect = 5e-75 Identities = 374/451 (82%) Strand = Plus / Plus Query: 75 gaagcacttcaagtacatcgtcctcggcggcggcgtctcagggggctacgcggcgcggga 134 ||||||||||| ||| || |||||||||| |||||| | | ||| ||||| |||||||| Sbjct: 109 gaagcacttcacctacgtcatcctcggcggaggcgtcgccgcgggatacgctgcgcggga 168 Query: 135 gttcgccaagcagggcgtgcagccnggggagctcgccatcatctccnaggaggccgtggc 194 |||||||||||||||||| |||| ||||| ||||||||||||||| |||| | ||||| Sbjct: 169 gttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaaggaatcggtggc 228 Query: 195 accttacgagcgccctgccctcagcaaggcgtacctgttccctcagagtcctgcaaggtt 254 || |||||||| ||||| |||||||||| ||||| || ||||||| | | || || | Sbjct: 229 tccctacgagcgtcctgctctcagcaagggatacctctttcctcagaatgcagccagact 288 Query: 255 gccaggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactc 314 || |||||||| ||||| || || || || ||||||||||||||||||||||| || Sbjct: 289 tccgggattccacacctgcgtcgggagcggcggagagaggctcttgcctgaatggtattc 348 Query: 315 agagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccna 374 ||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||| | Sbjct: 349 cgagaaaggtatcgagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaa 408 Query: 375 gaccctgactagttcagctggagcaacctttacatatgagattttgctaattgctactgg 434 ||| |||| |||||||||| ||||||||||| ||||| | |||||| ||||| ||||| Sbjct: 409 gacattgaccagttcagctgatgcaacctttacctatgacactttgctcattgccactgg 468 Query: 435 ctcctcggtcattaagctctctgattttggcactcaaggagctgattccaacaacattct 494 |||||||||||| |||||| |||| ||||| ||||||||| || ||||| |||| | Sbjct: 469 ctcctcggtcataaagctcactgactttggtgttcaaggagcagaggccaacgacatatt 528 Query: 495 gtacctaagggaagttgacgacgcggacaag 525 |||||| ||||| |||| ||||| |||||| Sbjct: 529 gtacctgagggatattgaggacgctgacaag 559
>dbj|AK102459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094C01, full insert sequence Length = 1720 Score = 289 bits (146), Expect = 5e-75 Identities = 374/451 (82%) Strand = Plus / Plus Query: 75 gaagcacttcaagtacatcgtcctcggcggcggcgtctcagggggctacgcggcgcggga 134 ||||||||||| ||| || |||||||||| |||||| | | ||| ||||| |||||||| Sbjct: 109 gaagcacttcacctacgtcatcctcggcggaggcgtcgccgcgggatacgctgcgcggga 168 Query: 135 gttcgccaagcagggcgtgcagccnggggagctcgccatcatctccnaggaggccgtggc 194 |||||||||||||||||| |||| ||||| ||||||||||||||| |||| | ||||| Sbjct: 169 gttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaaggaatcggtggc 228 Query: 195 accttacgagcgccctgccctcagcaaggcgtacctgttccctcagagtcctgcaaggtt 254 || |||||||| ||||| |||||||||| ||||| || ||||||| | | || || | Sbjct: 229 tccctacgagcgtcctgctctcagcaagggatacctctttcctcagaatgcagccagact 288 Query: 255 gccaggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactc 314 || |||||||| ||||| || || || || ||||||||||||||||||||||| || Sbjct: 289 tccgggattccacacctgcgtcgggagcggcggagagaggctcttgcctgaatggtattc 348 Query: 315 agagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccna 374 ||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||| | Sbjct: 349 cgagaaaggtatcgagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaa 408 Query: 375 gaccctgactagttcagctggagcaacctttacatatgagattttgctaattgctactgg 434 ||| |||| |||||||||| ||||||||||| ||||| | |||||| ||||| ||||| Sbjct: 409 gacattgaccagttcagctgatgcaacctttacctatgacactttgctcattgccactgg 468 Query: 435 ctcctcggtcattaagctctctgattttggcactcaaggagctgattccaacaacattct 494 |||||||||||| |||||| |||| ||||| ||||||||| || ||||| |||| | Sbjct: 469 ctcctcggtcataaagctcactgactttggtgttcaaggagcagaggccaacgacatatt 528 Query: 495 gtacctaagggaagttgacgacgcggacaag 525 |||||| ||||| |||| ||||| |||||| Sbjct: 529 gtacctgagggatattgaggacgctgacaag 559
>dbj|AB026731.1| Oryza sativa (japonica cultivar-group) mRNA for monodehydroascorbate reductase, partial cds Length = 1339 Score = 289 bits (146), Expect = 5e-75 Identities = 374/451 (82%) Strand = Plus / Plus Query: 75 gaagcacttcaagtacatcgtcctcggcggcggcgtctcagggggctacgcggcgcggga 134 ||||||||||| ||| || |||||||||| |||||| | | ||| ||||| |||||||| Sbjct: 157 gaagcacttcacctacgtcatcctcggcggaggcgtcgccgcgggatacgctgcgcggga 216 Query: 135 gttcgccaagcagggcgtgcagccnggggagctcgccatcatctccnaggaggccgtggc 194 |||||||||||||||||| |||| ||||| ||||||||||||||| |||| | ||||| Sbjct: 217 gttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaaggaatcggtggc 276 Query: 195 accttacgagcgccctgccctcagcaaggcgtacctgttccctcagagtcctgcaaggtt 254 || |||||||| ||||| |||||||||| ||||| || ||||||| | | || || | Sbjct: 277 tccctacgagcgtcctgctctcagcaagggatacctctttcctcagaatgcagccagact 336 Query: 255 gccaggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactc 314 || |||||||| ||||| || || || || ||||||||||||||||||||||| || Sbjct: 337 tccgggattccacacctgcgtcgggagcggcggagagaggctcttgcctgaatggtattc 396 Query: 315 agagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccna 374 ||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||| | Sbjct: 397 cgagaaaggtatcgagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaa 456 Query: 375 gaccctgactagttcagctggagcaacctttacatatgagattttgctaattgctactgg 434 ||| |||| |||||||||| ||||||||||| ||||| | |||||| ||||| ||||| Sbjct: 457 gacattgaccagttcagctgatgcaacctttacctatgacactttgctcattgccactgg 516 Query: 435 ctcctcggtcattaagctctctgattttggcactcaaggagctgattccaacaacattct 494 || ||||||||| |||||| |||| ||||| ||||||||| || ||||| |||| | Sbjct: 517 cttctcggtcataaagctcactgactttggtgttcaaggagcagaggccaacgacatatt 576 Query: 495 gtacctaagggaagttgacgacgcggacaag 525 |||||| ||||| |||| |||||||||||| Sbjct: 577 gtacctgagggatattgaggacgcggacaag 607
>gb|BT009287.1| Triticum aestivum clone wlm0.pk0014.b1:fis, full insert mRNA sequence Length = 1486 Score = 262 bits (132), Expect = 1e-66 Identities = 336/405 (82%) Strand = Plus / Plus Query: 121 tacgcggcgcgggagttcgccaagcagggcgtgcagccnggggagctcgccatcatctcc 180 ||||| ||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||| Sbjct: 20 tacgccgcgagggagttcggcaagcagggcgtccagcccggggagctcgccatcatctcc 79 Query: 181 naggaggccgtggcaccttacgagcgccctgccctcagcaaggcgtacctgttccctcag 240 ||||| ||||||| || || ||||| ||||| |||||||||| ||||| || || ||| Sbjct: 80 aaggagtccgtggctccgtatgagcgtcctgcgctcagcaagggctacctctttccccag 139 Query: 241 agtcctgcaaggttgccaggattccatgtgtgcgtgggaagtggaggcgagaggctcttg 300 | | | || ||| | ||||||||||| ||||| || || || || |||| ||||||| Sbjct: 140 aatgccgccaggcttccaggattccacacctgcgtcgggagcggcggggagaagctcttg 199 Query: 301 cctgaatggtactcagagaaaggtattgagcttatcctgagcactgaaattgtcaaagct 360 || ||||||||| | || ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 200 cccgaatggtacacggaaaaaggcattgagctgatcctgagcacggaaattgtcaaggct 259 Query: 361 gatcttgcctccnagaccctgactagttcagctggagcaacctttacatatgagattttg 420 |||||||||||| |||| |||| ||| |||||||||||||||| || ||||||| ||| Sbjct: 260 gatcttgcctccaagacattgaccagtgcagctggagcaaccttcacctatgagaccttg 319 Query: 421 ctaattgctactggctcctcggtcattaagctctctgattttggcactcaaggagctgat 480 || || || |||||||||||| ||| |||||| |||| |||||| ||||||||| || Sbjct: 320 ctcatcgccactggctcctcgaccataaagctcactgactttggcgttcaaggagcggaa 379 Query: 481 tccaacaacattctgtacctaagggaagttgacgacgcggacaag 525 || |||||||| |||| ||||||||| |||| ||||| |||||| Sbjct: 380 tcaaacaacatattgtatctaagggaaattgatgacgccgacaag 424
>gb|AY107597.1| Zea mays PCO071961 mRNA sequence Length = 1745 Score = 262 bits (132), Expect = 1e-66 Identities = 354/429 (82%) Strand = Plus / Plus Query: 78 gcacttcaagtacatcgtcctcggcggcggcgtctcagggggctacgcggcgcgggagtt 137 ||||||||||||| || ||||||||||||| ||| | | ||| ||||||||| ||||||| Sbjct: 222 gcacttcaagtacgtcatcctcggcggcggtgtcgcggcggggtacgcggcgagggagtt 281 Query: 138 cgccaagcagggcgtgcagccnggggagctcgccatcatctccnaggaggccgtggcacc 197 ||||||||||||||| | || || |||||||||||||||||| |||| | ||||| || Sbjct: 282 cgccaagcagggcgtcaaccccggcgagctcgccatcatctccaaggaaccagtggcccc 341 Query: 198 ttacgagcgccctgccctcagcaaggcgtacctgttccctcagagtcctgcaaggttgcc 257 ||| ||||||||||| |||||||||| ||||| |||||||||| ||||||| |||| Sbjct: 342 ttatgagcgccctgcactcagcaagggatacctcttccctcagaacgctgcaagactgcc 401 Query: 258 aggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactcaga 317 ||| ||||| ||| ||||| || || || ||||| || | |||||||||||||| || Sbjct: 402 aggcttccacacgtgtgtgggcagcggtggagagagactacttcctgaatggtactctga 461 Query: 318 gaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccnagac 377 |||||| ||||| || |||||||| ||||| ||||| || || || ||||| || |||| Sbjct: 462 gaaaggcattgaactgatcctgagtactgagattgtgaaggccgaccttgcttcaaagac 521 Query: 378 cctgactagttcagctggagcaacctttacatatgagattttgctaattgctactggctc 437 ||||| ||| |||||| | |||||| |||||||||| ||||| |||||||| ||||| Sbjct: 522 tctgaccagtgcagctgcggaaaccttcacatatgagaccttgctcattgctacgggctc 581 Query: 438 ctcggtcattaagctctctgattttggcactcaaggagctgattccaacaacattctgta 497 ||||||||| |||||| |||||||||| ||||||||| || ||||||||||| |||| Sbjct: 582 ctcggtcataaagctcactgattttggtgttcaaggagcagaatccaacaacatattgta 641 Query: 498 cctaaggga 506 |||||||| Sbjct: 642 tctaaggga 650
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 153 bits (77), Expect = 7e-34 Identities = 106/116 (91%) Strand = Plus / Plus Query: 325 attgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccnagaccctgact 384 |||||| | ||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 22344902 attgagttgatcctgagcactgaaattgtcaaagctgatcttgcctccaagactttgact 22344961 Query: 385 agttcagctggagcaacctttacatatgagattttgctaattgctactggctcctc 440 ||| ||| |||||||||||||||||||||||||||| | ||||| ||||||||||| Sbjct: 22344962 agtgcagttggagcaacctttacatatgagattttgatcattgcaactggctcctc 22345017 Score = 97.6 bits (49), Expect = 4e-17 Identities = 93/108 (86%) Strand = Plus / Plus Query: 441 ggtcattaagctctctgattttggcactcaaggagctgattccaacaacattctgtacct 500 |||||| ||||| || |||||||| ||||||||||||||||||||||||||| | || || Sbjct: 22345113 ggtcatcaagctatcagattttggtactcaaggagctgattccaacaacattttatatct 22345172 Query: 501 aagggaagttgacgacgcggacaagctgtatgcagccatccnagcaaa 548 ||||||||| || || || ||||||||| |||||| |||| |||||| Sbjct: 22345173 aagggaagtagatgatgctgacaagctggttgcagctatccaagcaaa 22345220 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 256 ccaggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactca 315 |||||||| |||||||| || || |||||||| |||||||| ||||| |||||||||||| Sbjct: 22344652 ccaggatttcatgtgtgtgtcggcagtggaggagagaggcttttgcccgaatggtactca 22344711 Query: 316 gagaaaggtattga 329 |||||||||||||| Sbjct: 22344712 gagaaaggtattga 22344725 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/68 (91%) Strand = Plus / Plus Query: 124 gcggcgcgggagttcgccaagcagggcgtgcagccnggggagctcgccatcatctccnag 183 ||||| |||||||||||||||||||| || |||| ||||||||||||||||||||| || Sbjct: 22343795 gcggcacgggagttcgccaagcagggtgttaagccaggggagctcgccatcatctccaag 22343854 Query: 184 gaggccgt 191 |||||||| Sbjct: 22343855 gaggccgt 22343862 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 75 gaagcacttcaagtacatcgtcctcggcggcggcgtc 111 |||||||||||||||| || ||||||||||||||||| Sbjct: 22343519 gaagcacttcaagtacgtcatcctcggcggcggcgtc 22343555 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 190 gtggcaccttacgagcgccctgccctcagcaaggcgtacctgttccctcagagt 243 ||||| ||||| ||||||||||| |||||||||| ||||| || ||||||||| Sbjct: 22344466 gtggctccttatgagcgccctgctctcagcaagggatacctctttcctcagagt 22344519
>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1155_H10 Length = 140475 Score = 153 bits (77), Expect = 7e-34 Identities = 106/116 (91%) Strand = Plus / Plus Query: 325 attgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccnagaccctgact 384 |||||| | ||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 106910 attgagttgatcctgagcactgaaattgtcaaagctgatcttgcctccaagactttgact 106969 Query: 385 agttcagctggagcaacctttacatatgagattttgctaattgctactggctcctc 440 ||| ||| |||||||||||||||||||||||||||| | ||||| ||||||||||| Sbjct: 106970 agtgcagttggagcaacctttacatatgagattttgatcattgcaactggctcctc 107025 Score = 97.6 bits (49), Expect = 4e-17 Identities = 93/108 (86%) Strand = Plus / Plus Query: 441 ggtcattaagctctctgattttggcactcaaggagctgattccaacaacattctgtacct 500 |||||| ||||| || |||||||| ||||||||||||||||||||||||||| | || || Sbjct: 107121 ggtcatcaagctatcagattttggtactcaaggagctgattccaacaacattttatatct 107180 Query: 501 aagggaagttgacgacgcggacaagctgtatgcagccatccnagcaaa 548 ||||||||| || || || ||||||||| |||||| |||| |||||| Sbjct: 107181 aagggaagtagatgatgctgacaagctggttgcagctatccaagcaaa 107228 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 256 ccaggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactca 315 |||||||| |||||||| || || |||||||| |||||||| ||||| |||||||||||| Sbjct: 106660 ccaggatttcatgtgtgtgtcggcagtggaggagagaggcttttgcccgaatggtactca 106719 Query: 316 gagaaaggtattga 329 |||||||||||||| Sbjct: 106720 gagaaaggtattga 106733 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/68 (91%) Strand = Plus / Plus Query: 124 gcggcgcgggagttcgccaagcagggcgtgcagccnggggagctcgccatcatctccnag 183 ||||| |||||||||||||||||||| || |||| ||||||||||||||||||||| || Sbjct: 105803 gcggcacgggagttcgccaagcagggtgttaagccaggggagctcgccatcatctccaag 105862 Query: 184 gaggccgt 191 |||||||| Sbjct: 105863 gaggccgt 105870 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 75 gaagcacttcaagtacatcgtcctcggcggcggcgtc 111 |||||||||||||||| || ||||||||||||||||| Sbjct: 105527 gaagcacttcaagtacgtcatcctcggcggcggcgtc 105563 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 190 gtggcaccttacgagcgccctgccctcagcaaggcgtacctgttccctcagagt 243 ||||| ||||| ||||||||||| |||||||||| ||||| || ||||||||| Sbjct: 106474 gtggctccttatgagcgccctgctctcagcaagggatacctctttcctcagagt 106527
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 127 bits (64), Expect = 4e-26 Identities = 108/123 (87%) Strand = Plus / Plus Query: 321 aggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccnagaccct 380 |||||| ||||| ||||||||||| ||||||||||| ||||||||||||||| |||| | Sbjct: 27893766 aggtatcgagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaagacatt 27893825 Query: 381 gactagttcagctggagcaacctttacatatgagattttgctaattgctactggctcctc 440 ||| |||||||||| ||||||||||| ||||| | |||||| ||||| ||||||||||| Sbjct: 27893826 gaccagttcagctgatgcaacctttacctatgacactttgctcattgccactggctcctc 27893885 Query: 441 ggt 443 ||| Sbjct: 27893886 ggt 27893888 Score = 85.7 bits (43), Expect = 1e-13 Identities = 59/65 (90%) Strand = Plus / Plus Query: 121 tacgcggcgcgggagttcgccaagcagggcgtgcagccnggggagctcgccatcatctcc 180 ||||| |||||||||||||||||||||||||| |||| ||||| ||||||||||||||| Sbjct: 27892878 tacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctcc 27892937 Query: 181 nagga 185 |||| Sbjct: 27892938 aagga 27892942 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 289 gagaggctcttgcctgaatggtactcagagaaaggta 325 ||||||||||||||||||||||| || |||||||||| Sbjct: 27893272 gagaggctcttgcctgaatggtattccgagaaaggta 27893308
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 127 bits (64), Expect = 4e-26 Identities = 108/123 (87%) Strand = Plus / Plus Query: 321 aggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgcctccnagaccct 380 |||||| ||||| ||||||||||| ||||||||||| ||||||||||||||| |||| | Sbjct: 101844 aggtatcgagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaagacatt 101903 Query: 381 gactagttcagctggagcaacctttacatatgagattttgctaattgctactggctcctc 440 ||| |||||||||| ||||||||||| ||||| | |||||| ||||| ||||||||||| Sbjct: 101904 gaccagttcagctgatgcaacctttacctatgacactttgctcattgccactggctcctc 101963 Query: 441 ggt 443 ||| Sbjct: 101964 ggt 101966 Score = 85.7 bits (43), Expect = 1e-13 Identities = 59/65 (90%) Strand = Plus / Plus Query: 121 tacgcggcgcgggagttcgccaagcagggcgtgcagccnggggagctcgccatcatctcc 180 ||||| |||||||||||||||||||||||||| |||| ||||| ||||||||||||||| Sbjct: 100956 tacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctcc 101015 Query: 181 nagga 185 |||| Sbjct: 101016 aagga 101020 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 289 gagaggctcttgcctgaatggtactcagagaaaggta 325 ||||||||||||||||||||||| || |||||||||| Sbjct: 101350 gagaggctcttgcctgaatggtattccgagaaaggta 101386
>gb|AY024075.1| Oryza sativa microsatellite MRG6400 containing (GATG)X6, closest to marker R662, genomic sequence Length = 224 Score = 85.7 bits (43), Expect = 1e-13 Identities = 59/65 (90%) Strand = Plus / Minus Query: 121 tacgcggcgcgggagttcgccaagcagggcgtgcagccnggggagctcgccatcatctcc 180 ||||| |||||||||||||||||||||||||| |||| ||||| ||||||||||||||| Sbjct: 199 tacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctcc 140 Query: 181 nagga 185 |||| Sbjct: 139 aagga 135
>gb|AY039786.1| Brassica rapa subsp. pekinensis monodehydroascorbate reductase mRNA, complete cds Length = 1564 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 81 cttcaagtacatcgtcctcggcggcggcgtctcag 115 ||||||||||||| ||||||||||||||||||||| Sbjct: 50 cttcaagtacatcatcctcggcggcggcgtctcag 84
>gb|L41345.1|TOMAFRR Lycopersicon esculentum ascorbate free radical reductase (AFRR), complete cds Length = 1709 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 256 ccaggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactca 315 |||||||| |||||||| || ||||||||||| ||||| | | ||||| ||||| || Sbjct: 238 ccaggatttcatgtgtgtgttggaagtggaggagagagacagcttcctgagtggtatgca 297 Query: 316 gagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgc 368 |||||||| ||| | | |||||||| |||||||| || ||||| |||||||| Sbjct: 298 gagaaaggcatttcgttgatcctgagtactgaaatagtgaaagcagatcttgc 350
>ref|NM_120444.2| Arabidopsis thaliana disulfide oxidoreductase/ oxidoreductase AT5G03630 mRNA, complete cds Length = 1581 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 305 aatggtactcagagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatc 364 |||||||| |||||||||||||||||| || || |||| || ||||||||||| |||| Sbjct: 303 aatggtacaaagagaaaggtattgagctgattttgggcacagagattgtcaaagcagatc 362 Query: 365 ttgc 368 |||| Sbjct: 363 ttgc 366
>gb|AY142000.1| Arabidopsis thaliana At5g03630/F17C15_50 mRNA, complete cds Length = 1308 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 305 aatggtactcagagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatc 364 |||||||| |||||||||||||||||| || || |||| || ||||||||||| |||| Sbjct: 242 aatggtacaaagagaaaggtattgagctgattttgggcacagagattgtcaaagcagatc 301 Query: 365 ttgc 368 |||| Sbjct: 302 ttgc 305
>gb|AY057628.1| Arabidopsis thaliana AT5g03630/F17C15_50 mRNA, complete cds Length = 1577 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 305 aatggtactcagagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatc 364 |||||||| |||||||||||||||||| || || |||| || ||||||||||| |||| Sbjct: 294 aatggtacaaagagaaaggtattgagctgattttgggcacagagattgtcaaagcagatc 353 Query: 365 ttgc 368 |||| Sbjct: 354 ttgc 357
>gb|AF428317.1|AF428317 Arabidopsis thaliana AT5g03630/F17C15_50 mRNA, complete cds Length = 1526 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 305 aatggtactcagagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatc 364 |||||||| |||||||||||||||||| || || |||| || ||||||||||| |||| Sbjct: 291 aatggtacaaagagaaaggtattgagctgattttgggcacagagattgtcaaagcagatc 350 Query: 365 ttgc 368 |||| Sbjct: 351 ttgc 354
>gb|AY087318.1| Arabidopsis thaliana clone 34156 mRNA, complete sequence Length = 1538 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 305 aatggtactcagagaaaggtattgagcttatcctgagcactgaaattgtcaaagctgatc 364 |||||||| |||||||||||||||||| || || |||| || ||||||||||| |||| Sbjct: 304 aatggtacaaagagaaaggtattgagctgattttgggcacagagattgtcaaagcagatc 363 Query: 365 ttgc 368 |||| Sbjct: 364 ttgc 367
>emb|AJ301553.1|MCR301553 Mesembryanthemum crystallinum mRNA for monodehydroascorbate reductase (mdhar1 gene) Length = 1592 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 259 ggattccatgtgtgcgtgggaagtggaggcgagaggctcttgcctgaatggtactcagag 318 ||||||||||| || || ||||| ||||| ||||| || | ||||| ||||| ||| Sbjct: 342 ggattccatgtttgtgtaggaagcggaggggagagacttgttcctgactggtataaggag 401 Query: 319 aaaggtattgagcttatcctgagcactgaaattgtcaaagctgatctt 366 |||||||| ||| | || |||||||| ||||| ||||||||||||||| Sbjct: 402 aaaggtatagagttgattctgagcacagaaatagtcaaagctgatctt 449
>ref|NM_115148.2| Arabidopsis thaliana disulfide oxidoreductase/ oxidoreductase AT3G52880 mRNA, complete cds Length = 1657 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 106 aagtacatcatcctcggcggcggcgtctc 134
>gb|AY125492.1| Arabidopsis thaliana putative monodehydroascorbate reductase protein (At3g52880) mRNA, complete cds Length = 1557 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 71 aagtacatcatcctcggcggcggcgtctc 99
>gb|AY091403.1| Arabidopsis thaliana putative monodehydroascorbate reductase (At3g52880) mRNA, complete cds Length = 1336 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 19 aagtacatcatcctcggcggcggcgtctc 47
>gb|AY057576.1| Arabidopsis thaliana putative (NADH) monodehydroascorbate reductase (At3g52880) mRNA, complete cds Length = 1551 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 101 aagtacatcatcctcggcggcggcgtctc 129
>gb|AF360197.1| Arabidopsis thaliana putative (NADH) monodehydroascorbate reductase (At3g52880) mRNA, complete cds Length = 1527 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 45 aagtacatcatcctcggcggcggcgtctc 73
>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2 Length = 99814 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 27728 aagtacatcatcctcggcggcggcgtctc 27700
>gb|AY070718.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, complete cds Length = 1642 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 92 aagtacatcatcctcggcggcggcgtctc 120
>gb|AY060525.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, complete cds Length = 1305 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 19 aagtacatcatcctcggcggcggcgtctc 47
>gb|AY045666.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, complete cds Length = 1546 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 73 aagtacatcatcctcggcggcggcgtctc 101
>emb|BX823908.1|CNS0A6NU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1480 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 48 aagtacatcatcctcggcggcggcgtctc 76
>gb|AY086968.1| Arabidopsis thaliana clone 30012 mRNA, complete sequence Length = 1575 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 85 aagtacatcgtcctcggcggcggcgtctc 113 ||||||||| ||||||||||||||||||| Sbjct: 106 aagtacatcatcctcggcggcggcgtctc 134
>gb|BT009417.1| Triticum aestivum clone wlmk1.pk0007.f9:fis, full insert mRNA sequence Length = 1821 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 87 gtacatcgtcctcggcggcggcgtctcagggggctacgcggcgcgggagttcgcc 141 |||| ||||||| ||||||||||| | | |||||||||||||| ||||||||| Sbjct: 170 gtacgtcgtcctgggcggcggcgtggccgcgggctacgcggcgctcgagttcgcc 224
>gb|DQ159869.1| Physcomitrella patens monodehydroascorbate reductase I (Mdhar1) gene, promoter region and complete cds Length = 6026 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 243 tcctgcaaggttgccaggattccatgtgtgcgtgggaagtggaggcgaga 292 |||||| ||| | ||||| || |||||||||||||| |||||||| |||| Sbjct: 3603 tcctgctaggcttccaggctttcatgtgtgcgtggggagtggaggagaga 3652
>ref|NM_101898.2| Arabidopsis thaliana 4-coumarate-CoA ligase AT1G20480 mRNA, complete cds Length = 2457 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 1473 ctagttcagctggagcaacct 1453
>ref|NM_116755.4| Arabidopsis thaliana 4-coumarate-CoA ligase/ fatty-acyl-CoA synthase AT4G05160 mRNA, complete cds Length = 1861 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 1435 ctagttcagctggagcaacct 1415
>ref|XM_507362.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.127 mRNA Length = 1121 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cgccgtcgtcaccagccagccagccatgg 67 ||||| |||| |||||||||||||||||| Sbjct: 28 cgccgccgtcgccagccagccagccatgg 56
>ref|XM_477674.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1099 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cgccgtcgtcaccagccagccagccatgg 67 ||||| |||| |||||||||||||||||| Sbjct: 29 cgccgccgtcgccagccagccagccatgg 57
>ref|XM_506288.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.127 mRNA Length = 1103 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cgccgtcgtcaccagccagccagccatgg 67 ||||| |||| |||||||||||||||||| Sbjct: 30 cgccgccgtcgccagccagccagccatgg 58
>gb|AY250839.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At4g05160) mRNA, complete cds Length = 1635 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 1369 ctagttcagctggagcaacct 1349
>gb|AY250833.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At1g20480) mRNA, complete cds Length = 1698 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 1432 ctagttcagctggagcaacct 1412
>gb|AY122950.1| Arabidopsis thaliana putative 4-coumarate--CoA ligase (At4g05160) mRNA, complete cds Length = 1666 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 1369 ctagttcagctggagcaacct 1349
>gb|AY091079.1| Arabidopsis thaliana putative 4-coumarate--CoA ligase (At4g05160) mRNA, complete cds Length = 1788 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 1411 ctagttcagctggagcaacct 1391
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15 Length = 199987 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 4580 ctagttcagctggagcaacct 4560
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14 Length = 198563 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 198143 ctagttcagctggagcaacct 198123
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 aagctctctgattttggcact 468 ||||||||||||||||||||| Sbjct: 771557 aagctctctgattttggcact 771577
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cgccgtcgtcaccagccagccagccatgg 67 ||||| |||| |||||||||||||||||| Sbjct: 13045097 cgccgccgtcgccagccagccagccatgg 13045125
>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds Length = 20754 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gccatggccaccgggaagcac 81 ||||||||||||||||||||| Sbjct: 16869 gccatggccaccgggaagcac 16849
>emb|BX814177.1|CNS0ADT8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1851 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 1470 ctagttcagctggagcaacct 1450
>emb|BX816812.1|CNS0AD1Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1811 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 1473 ctagttcagctggagcaacct 1453
>emb|BX827081.1|CNS0A38R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB93ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1821 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 1394 ctagttcagctggagcaacct 1374
>gb|AF197897.1|AF197897 Takifugu rubripes Nemo-like kinase (NLK) and FN5 protein (FN5) genes, complete cds; and neurofibromatosis type 1 neurofibromin (NF1) gene, partial cds Length = 16370 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 ggcggcgtctcagggggctac 123 ||||||||||||||||||||| Sbjct: 3632 ggcggcgtctcagggggctac 3652
>gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana BAC F5M15 from chromosome I, complete sequence Length = 99231 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 69212 ctagttcagctggagcaacct 69192
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cgccgtcgtcaccagccagccagccatgg 67 ||||| |||| |||||||||||||||||| Sbjct: 119394 cgccgccgtcgccagccagccagccatgg 119422
>dbj|AB125637.1| Brassica oleracea BO-MDAR 2 mRNA for monodehydroascorbate reductase, complete cds Length = 1543 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 81 cttcaagtacatcgtcctcggcggcggcgtctc 113 |||||| |||||| ||||||||||||| ||||| Sbjct: 65 cttcaaatacatcatcctcggcggcggagtctc 97 Score = 40.1 bits (20), Expect = 7.4 Identities = 49/59 (83%) Strand = Plus / Plus Query: 175 atctccnaggaggccgtggcaccttacgagcgccctgccctcagcaaggcgtacctgtt 233 |||||| | ||||||||||| || || || |||||||| || ||||||| ||| ||||| Sbjct: 159 atctccaaagaggccgtggctccatatgaacgccctgcacttagcaaggggtatctgtt 217
>dbj|AK104106.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D02, full insert sequence Length = 1099 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cgccgtcgtcaccagccagccagccatgg 67 ||||| |||| |||||||||||||||||| Sbjct: 29 cgccgccgtcgccagccagccagccatgg 57
>dbj|AK101796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066C05, full insert sequence Length = 1122 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cgccgtcgtcaccagccagccagccatgg 67 ||||| |||| |||||||||||||||||| Sbjct: 28 cgccgccgtcgccagccagccagccatgg 56
>gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana Clone C6L9, Chromosome IV, complete sequence Length = 145453 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 110716 ctagttcagctggagcaacct 110736
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV, complete sequence Length = 183147 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 ctagttcagctggagcaacct 403 ||||||||||||||||||||| Sbjct: 54967 ctagttcagctggagcaacct 54987
>dbj|AK061243.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D04, full insert sequence Length = 1103 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cgccgtcgtcaccagccagccagccatgg 67 ||||| |||| |||||||||||||||||| Sbjct: 30 cgccgccgtcgccagccagccagccatgg 58
>gb|AC102535.17| Mus musculus chromosome 7, clone RP23-61O11, complete sequence Length = 220003 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tgggaagtggaggcgagagg 294 |||||||||||||||||||| Sbjct: 165595 tgggaagtggaggcgagagg 165576
>gb|AY260902.1| Rhodospirillum centenum che2 gene cluster, complete sequence Length = 11332 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgccaagcagggcgtgcagc 157 |||||||||||||||||||| Sbjct: 3326 cgccaagcagggcgtgcagc 3345
>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome Length = 920079 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 tgaaattgtcaaagctgatcttgc 368 ||||||||||||||||| |||||| Sbjct: 462627 tgaaattgtcaaagctggtcttgc 462650
>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome Length = 897405 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 tgaaattgtcaaagctgatcttgc 368 ||||||||||||||||| |||||| Sbjct: 446088 tgaaattgtcaaagctggtcttgc 446111
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cgcggcgcgggagttcgccaagca 146 ||||||||| |||||||||||||| Sbjct: 2272021 cgcggcgcgcgagttcgccaagca 2272044
>gb|AY302547.1| Human echovirus 21 strain Farina complete genome Length = 7426 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cagccatggccaccgggaag 78 |||||||||||||||||||| Sbjct: 2099 cagccatggccaccgggaag 2118
>gb|AC125087.2| Mus musculus BAC clone RP24-143E18 from chromosome 14, complete sequence Length = 180794 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 agctctctgattttggcactcaag 472 ||||||||| |||||||||||||| Sbjct: 134923 agctctctgtttttggcactcaag 134900
>gb|AC124521.2| Mus musculus BAC clone RP23-395M9 from 5, complete sequence Length = 184380 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ttgagcttatcctgagcact 345 |||||||||||||||||||| Sbjct: 50745 ttgagcttatcctgagcact 50764
>gb|AC110259.17| Mus musculus chromosome 5, clone RP23-287A8, complete sequence Length = 230585 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ttgagcttatcctgagcact 345 |||||||||||||||||||| Sbjct: 3867 ttgagcttatcctgagcact 3848
>emb|AL591167.6| Human DNA sequence from clone RP11-25O10 on chromosome 1 Contains the 5' end of gene KIAA0191, a pseudogene similar to part of eukaryotic translation elongation factor 1 gamma (EEF1G) and a CpG island, complete sequence Length = 60185 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tgggaagtggaggcgagagg 294 |||||||||||||||||||| Sbjct: 10923 tgggaagtggaggcgagagg 10904
>gb|AC091520.10| Mus musculus strain 129/SvJ clone mgs1-480e13, complete sequence Length = 105813 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 agctctctgattttggcactcaag 472 ||||||||| |||||||||||||| Sbjct: 54361 agctctctgtttttggcactcaag 54338
>gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome 14, complete sequence Length = 242759 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 449 agctctctgattttggcactcaag 472 ||||||||| |||||||||||||| Sbjct: 219654 agctctctgtttttggcactcaag 219677
>emb|AL162506.1|ATF17C15 Arabidopsis thaliana DNA chromosome 5, BAC clone F17C15 (ESSA project) Length = 102897 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 321 aggtattgagcttatcctgagcactgaaattgtcaaagctgatcttgc 368 |||||||||||| || || |||| || ||||||||||| |||||||| Sbjct: 19149 aggtattgagctgattttgggcacagagattgtcaaagcagatcttgc 19102
>gb|AC020779.10| Homo sapiens chromosome 15, clone RP11-2I17, complete sequence Length = 171123 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccagccagccagccatggcc 69 |||||||||||||||||||| Sbjct: 93340 ccagccagccagccatggcc 93321
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 catcgtcctcggcggcggcg 109 |||||||||||||||||||| Sbjct: 3572295 catcgtcctcggcggcggcg 3572314
>gb|AC132096.4| Mus musculus BAC clone RP24-392H7 from chromosome 7, complete sequence Length = 114183 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 tgggaagtggaggcgagagg 294 |||||||||||||||||||| Sbjct: 86535 tgggaagtggaggcgagagg 86554
>gb|AE005081.1| Halobacterium sp. NRC-1 section 112 of 170 of the complete genome Length = 19293 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcgtcctcggcggcggcgtc 111 |||||||||||||||||||| Sbjct: 6327 tcgtcctcggcggcggcgtc 6346
>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome Length = 892758 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 tgaaattgtcaaagctgatcttgc 368 ||||||||||||||||| |||||| Sbjct: 452557 tgaaattgtcaaagctggtcttgc 452580
>gb|DQ002886.1| Oryzias latipes somatolactin receptor (SLR) mRNA, complete cds Length = 2961 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 gttccctcagagtcctgcaaggtt 254 ||||||||||||| |||||||||| Sbjct: 2317 gttccctcagagtgctgcaaggtt 2294 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,214,094 Number of Sequences: 3902068 Number of extensions: 4214094 Number of successful extensions: 93169 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92814 Number of HSP's gapped (non-prelim): 351 length of query: 548 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 525 effective length of database: 17,143,297,704 effective search space: 9000231294600 effective search space used: 9000231294600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)