ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13c02 |
|---|---|
| Clone Library Name | barley_pub |
>CY561_PIG (Q95245) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 99.4 bits (246), Expect = 7e-21 Identities = 48/106 (45%), Positives = 66/106 (62%) Frame = +3 Query: 282 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLIL 461 W +RGG+A+E+A L FNVHP+ M+IG + L +A++VY+VF T K+ H +L Sbjct: 35 WLGAYRGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKILHGLL 91 Query: 462 HAIAIVLGAVGIYCAFKFHNDSGIAXLYSLHSWLGIGAISLYGIQW 599 H +A V+ VG+ F +H GIA LYSLHSW GI L+ QW Sbjct: 92 HVLAFVIALVGLVAVFDYHRKKGIADLYSLHSWCGILVFVLFLAQW 137
>CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 97.4 bits (241), Expect = 3e-20 Identities = 48/110 (43%), Positives = 66/110 (60%) Frame = +3 Query: 270 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 449 M W +RGG+A+E+ +L FN HP+ M+IG I L +A++VY+VF T K+ Sbjct: 30 MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFLQGDALLVYRVFRNEAKRTTKVL 86 Query: 450 HLILHAIAIVLGAVGIYCAFKFHNDSGIAXLYSLHSWLGIGAISLYGIQW 599 H +LH A+V+ VG+ F +H G A LYSLHSW GI LY +QW Sbjct: 87 HGLLHIFALVIALVGLVAVFDYHRKEGYADLYSLHSWCGILVFVLYFVQW 136
>CY561_BOVIN (P10897) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 97.4 bits (241), Expect = 3e-20 Identities = 48/110 (43%), Positives = 66/110 (60%) Frame = +3 Query: 270 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 449 M W +RGG+A+E+A L FNVHP+ M+IG + L +A++VY+VF T K+ Sbjct: 31 MTGAWLGMYRGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKVL 87 Query: 450 HLILHAIAIVLGAVGIYCAFKFHNDSGIAXLYSLHSWLGIGAISLYGIQW 599 H +LH A V+ VG+ F+ H G A LYSLHSW GI +L+ QW Sbjct: 88 HGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALFFAQW 137
>CY561_MOUSE (Q60720) Cytochrome b561 (Cytochrome b-561)| Length = 250 Score = 97.4 bits (241), Expect = 3e-20 Identities = 47/106 (44%), Positives = 65/106 (61%) Frame = +3 Query: 282 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLIL 461 W +RGG+A+E++ L FNVHP+ M+IG I L +A++VY+VF T K+ H +L Sbjct: 33 WLGLYRGGIAWESS---LQFNVHPLCMVIGMIFLQGDALLVYRVFRREAKRTTKILHGLL 89 Query: 462 HAIAIVLGAVGIYCAFKFHNDSGIAXLYSLHSWLGIGAISLYGIQW 599 H A ++ VG+ F +H G A LYSLHSW GI LY +QW Sbjct: 90 HVFAFIIALVGLVAVFDYHKKKGYADLYSLHSWCGILVFVLYFVQW 135
>CY561_SHEEP (Q95204) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 97.1 bits (240), Expect = 4e-20 Identities = 48/110 (43%), Positives = 66/110 (60%) Frame = +3 Query: 270 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 449 M W +RGG+A+E+A L FNVHP+ M+IG + L +A++VY+VF T K+ Sbjct: 31 MTGAWLGMYRGGIAWESA---LQFNVHPLCMVIGLVFLQGDALLVYRVFRNEAKRTTKVL 87 Query: 450 HLILHAIAIVLGAVGIYCAFKFHNDSGIAXLYSLHSWLGIGAISLYGIQW 599 H +LH A V+ VG+ F+ H G A LYSLHSW GI +L+ QW Sbjct: 88 HGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALFFAQW 137
>CY561_HUMAN (P49447) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 96.7 bits (239), Expect = 5e-20 Identities = 48/110 (43%), Positives = 65/110 (59%) Frame = +3 Query: 270 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 449 M W +RGG+A+E+ +L FN HP+ M+IG I L A++VY+VF T K+ Sbjct: 30 MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFLQGNALLVYRVFRNEAKRTTKVL 86 Query: 450 HLILHAIAIVLGAVGIYCAFKFHNDSGIAXLYSLHSWLGIGAISLYGIQW 599 H +LH A+V+ VG+ F +H G A LYSLHSW GI LY +QW Sbjct: 87 HGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQW 136
>CY561_XENLA (Q91577) Cytochrome b561 (Cytochrome b-561)| Length = 247 Score = 88.2 bits (217), Expect = 2e-17 Identities = 38/89 (42%), Positives = 58/89 (65%) Frame = +3 Query: 333 LIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLILHAIAIVLGAVGIYCAFK 512 L FNVHP+ M++G + L EA++VY+VF + K+ H +LH +A+V+ VG+ F+ Sbjct: 48 LQFNVHPLCMVLGMVFLCGEALLVYRVFRHETKRSTKILHGVLHIMALVISLVGVIAVFQ 107 Query: 513 FHNDSGIAXLYSLHSWLGIGAISLYGIQW 599 +H +G +YSLHSW GI +LY +QW Sbjct: 108 YHQANGYPDMYSLHSWCGIVTFTLYILQW 136
>CY561_CAEEL (P34465) Putative cytochrome b561 (Cytochrome b-561)| Length = 266 Score = 74.3 bits (181), Expect = 2e-13 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 8/118 (6%) Frame = +3 Query: 270 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 449 +V +W F G A+ + + FN HP M++G + L EA++VY+VF +K Sbjct: 38 LVTIWMSKFESGFAWNE-DPDKEFNYHPTFMIMGMVFLFGEALLVYRVFRNERKKFSKTL 96 Query: 450 HLILHAIAIVLGAVGIYCAFKFH--------NDSGIAXLYSLHSWLGIGAISLYGIQW 599 H+ILH+ +V + + F +H N + I L SLHSW+G+ + LY Q+ Sbjct: 97 HVILHSCVLVFMLMALKAVFDYHNLHKDPSGNPAPIVNLVSLHSWIGLSVVILYFAQY 154
>C56D2_HUMAN (O14569) Cytochrome b561 domain-containing protein 2 (Putative| tumor suppressor protein 101F6) Length = 222 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Frame = +3 Query: 336 IFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAK----LTHLILHAIAIVLGAVGIYC 503 +F+ HPVLM + F L +EA++V+ L H ++ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARCHWVLQLLALLCALLGLGL 103 Query: 504 AFKFHNDSGIAXLYSLHSWLGIGAISLYGIQ 596 G A L + H G+ A+ G+Q Sbjct: 104 VILHKEQLGKAHLVTRHGQAGLLAVLWAGLQ 134
>C56D1_HUMAN (Q8N8Q1) Cytochrome b561 domain-containing protein 1| Length = 229 Score = 39.3 bits (90), Expect = 0.009 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Frame = +3 Query: 336 IFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLILH----AIAIVLGAVGIYC 503 +F+ HPV M + F + +EAI+++ L ++ + LH +AI+ A+G+ Sbjct: 51 LFSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGF 110 Query: 504 AFKFHNDSGIAXLYSLHSWLG 566 S + L S HSW+G Sbjct: 111 IISSRTRSELPHLVSWHSWVG 131
>C56D2_RAT (Q641Y1) Cytochrome b561 domain-containing protein 2| Length = 222 Score = 38.5 bits (88), Expect = 0.015 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%) Frame = +3 Query: 336 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGIYC 503 +F+ HPVLM + F L +EA++++ + L+ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLMFSPESSLLRSLSRKVRARCHWVLQLLALLCALLGLGL 103 Query: 504 AFKFHNDSGIAXLYSLHSWLGIGAISLYGIQ 596 G A L + H G+ A+ G+Q Sbjct: 104 VILHKEQLGKAHLATRHGQAGLLAVLWAGLQ 134
>C56D2_MOUSE (Q9WUE3) Cytochrome b561 domain-containing protein 2 (Putative| tumor suppressor protein 101F6) Length = 222 Score = 38.5 bits (88), Expect = 0.015 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%) Frame = +3 Query: 336 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGIYC 503 +F+ HPVLM + F L +EA++++ + L+ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLMFSPESSLLRSLSRKVRARCHWVLQLLALLCALLGLGL 103 Query: 504 AFKFHNDSGIAXLYSLHSWLGIGAISLYGIQ 596 G A L + H G+ A+ G+Q Sbjct: 104 VILHKEQLGKAHLTTRHGQAGLLAVLWAGLQ 134
>C56D2_BOVIN (Q5E965) Cytochrome b561 domain-containing protein 2| Length = 222 Score = 38.5 bits (88), Expect = 0.015 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%) Frame = +3 Query: 336 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGIYC 503 +F+ HPVLM + F L +EA++V+ + L+ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLVFSPESSLLRSLSRKGRARCHWVLQLLALLCALLGLGL 103 Query: 504 AFKFHNDSGIAXLYSLHSWLGIGAISLYGIQ 596 G A L + H G+ A+ G+Q Sbjct: 104 VILHKEQLGKAHLATWHGRAGLLAVLWAGLQ 134
>5HT2C_RAT (P08909) 5-hydroxytryptamine 2C receptor (5-HT-2C) (Serotonin| receptor 2C) (5-HT2C) (5-HTR2C) (5HT-1C) Length = 460 Score = 30.8 bits (68), Expect = 3.1 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%) Frame = +3 Query: 114 GRECAAPAPTGDQRKKKKEEDAGVRGEMAIALGVKATPFTYXXXXXXXXXXXMVLVWCIH 293 G E AP P DQ+ ++K+++ RG M K +++WC Sbjct: 275 GEEENAPNPNPDQKPRRKKKEKRPRGTMQAINNEKK-----ASKVLGIVFFVFLIMWCPF 329 Query: 294 F----RGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVF 416 F L +A N+ L+ + V + IG++ G +VY +F Sbjct: 330 FITNILSVLCGKACNQKLMEKLLNVFVWIGYVCSGINP-LVYTLF 373
>MRAY_PELUB (Q4FPK2) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 361 Score = 29.6 bits (65), Expect = 6.9 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +3 Query: 477 VLGAVGIYCAFKFHNDSGIAXLYSLHSWLGIGAISLYGI 593 +LGA Y KF N SG++ + + S + I + +YG+ Sbjct: 111 LLGAYDDYKKIKFKNSSGVSFKFKIISQILIAIVGIYGL 149
>RPOP_MAIZE (P10581) Probable DNA-directed RNA polymerase (EC 2.7.7.6) (S-2 DNA| ORF1) Length = 1098 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/48 (29%), Positives = 26/48 (54%) Frame = -2 Query: 458 DQVGQLGSIVVQSRKYLVDHYGFTAEDNETDQHKNRVDVEDEVLVGRL 315 D + ++G ++ K+L DH A NE Q+K+ VE+ ++ R+ Sbjct: 933 DSIFRMGHPLIIINKFLFDHILIPAIQNEHPQNKHLFSVEERSMLDRM 980
>PTTBC_ECOLI (P36672) PTS system trehalose-specific EIIBC component (EIIBC-Tre)| (EII-Tre) [Includes: Trehalose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system trehalose-specific EIIB component); Trehalose permease IIC component Length = 473 Score = 29.3 bits (64), Expect = 9.1 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +3 Query: 453 LILHAIAIVLGAVGIYCAFKFHNDSGIAXLYSLHSWLGIGAISLYGI 593 + L IA +GI + + HN+ I+ ++ +WLG+ ++YGI Sbjct: 345 IALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGI 391
>APOB_HUMAN (P04114) Apolipoprotein B-100 precursor (Apo B-100) [Contains:| Apolipoprotein B-48 (Apo B-48)] Length = 4563 Score = 29.3 bits (64), Expect = 9.1 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -2 Query: 416 KYLVDHYGFTAEDNETDQHKNRVDVEDEVLVGRLEGEAAAEVDA 285 K LVDH+G+T +D N + + E L+ L+ + E A Sbjct: 732 KVLVDHFGYTKDDKHEQDMVNGIMLSVEKLIKDLKSKEVPEARA 775 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,755,154 Number of Sequences: 219361 Number of extensions: 1118421 Number of successful extensions: 3660 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3585 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3654 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
