Clone Information

BLAST Search Result

Clone Name	bart13b12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PPM1F_HUMAN (P49593) Ca(2+)/calmodulin-dependent protein kinase ...	42	0.002
2	PPM1F_MOUSE (Q8CGA0) Ca(2+)/calmodulin-dependent protein kinase ...	38	0.022
3	PP2CL_MOUSE (Q8BHN0) Protein phosphatase 2C isoform epsilon (EC ...	37	0.049
4	PP2CL_HUMAN (Q5SGD2) Protein phosphatase 2C isoform epsilon (EC ...	36	0.064
5	PPM1F_RAT (Q9WVR7) Ca(2+)/calmodulin-dependent protein kinase ph...	35	0.19
6	PTP1_ENCCU (O76942) Major polar tube protein precursor (Major PTP)	33	0.41
7	BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTP...	33	0.71
8	PP2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC...	33	0.71
9	VGLI_BHV1S (Q08102) Glycoprotein I	32	1.2
10	PP2C2_SCHPO (Q09172) Protein phosphatase 2C homolog 2 (EC 3.1.3....	32	1.2
11	T7L1C_XENLA (P70063) Transcription factor 7-like 1-C (HMG box tr...	31	2.1
12	T7L1B_XENLA (Q90ZB6) Transcription factor 7-like 1-B (HMG box tr...	31	2.1
13	TNR8_HUMAN (P28908) Tumor necrosis factor receptor superfamily m...	31	2.7
14	AMOT_HUMAN (Q4VCS5) Angiomotin	31	2.7
15	RNC_PELCD (Q3A4Q8) Ribonuclease III (EC 3.1.26.3) (RNase III)	31	2.7
16	RCOR1_HUMAN (Q9UKL0) REST corepressor 1 (Protein CoREST)	31	2.7
17	PP2C3_YEAST (P34221) Protein phosphatase 2C homolog 3 (EC 3.1.3....	31	2.7
18	TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (S...	31	2.7
19	SQHC_ZYMMO (P33990) Squalene--hopene cyclase (EC 5.4.99.17)	31	2.7
20	RL22_DROME (P50887) 60S ribosomal protein L22	30	3.5
21	VID21_GIBZE (Q4IB96) Chromatin modification-related protein VID21	30	3.5
22	KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-ass...	30	3.5
23	KCNQ1_HUMAN (P51787) Potassium voltage-gated channel subfamily K...	30	4.6
24	DHRS1_MOUSE (Q99L04) Dehydrogenase/reductase SDR family member 1...	30	4.6
25	MUTS_THIDA (Q3SJP0) DNA mismatch repair protein mutS	30	4.6
26	ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein ...	30	4.6
27	T7L1D_XENLA (P70064) Transcription factor 7-like 1-D (HMG box tr...	30	4.6
28	CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5...	30	4.6
29	AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clath...	30	4.6
30	KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-ass...	30	6.0
31	IE18_PRVKA (P33479) Immediate-early protein IE180	30	6.0
32	FOXO1_HUMAN (Q12778) Forkhead box protein O1A (Forkhead in rhabd...	30	6.0
33	VTDB_HUMAN (P02774) Vitamin D-binding protein precursor (DBP) (G...	29	7.8
34	MSH4_MOUSE (Q99MT2) MutS protein homolog 4 (mMsh4)	29	7.8
35	DHRS1_HUMAN (Q96LJ7) Dehydrogenase/reductase SDR family member 1...	29	7.8
36	VSP1_BOTJA (P81824) Platelet-aggregating proteinase PA-BJ (EC 3....	29	7.8
37	EVL_MOUSE (P70429) Ena/VASP-like protein (Ena/vasodilator stimul...	29	7.8
38	PDP2_RAT (O88484) [Pyruvate dehydrogenase [lipoamide]]-phosphata...	29	7.8
39	FOXF2_HUMAN (Q12947) Forkhead box protein F2 (Forkhead-related p...	29	7.8
40	CU38_LOCMI (P04375) Cuticle protein 38 (LM-38) (LM-ACP 38)	29	7.8
41	EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulat...	29	7.8
42	KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-ass...	29	7.8
43	M3K1_MOUSE (P53349) Mitogen-activated protein kinase kinase kina...	29	7.8
44	YGHU_ECOLI (Q46845) Hypothetical GST-like protein yghU	29	7.8
45	H14_RABIT (P02252) Histone H1.4 (Fragment)	29	7.8

>PPM1F_HUMAN (P49593) Ca(2+)/calmodulin-dependent protein kinase phosphatase (EC|
           3.1.3.16) (CaM-kinase phosphatase) (CaMKPase) (Partner
           of PIX 2) (hFEM-2) (Protein phosphatase 1F)
          Length = 454

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
 Frame = +1

Query: 154 GHWP---PGAAAADGMLWQTELRPHAAGEFSMAAAQANLVMEDQAQVLASPA-ATLVGVY 321
           G W    P AA A    W   +         M     +L   +Q   L+ P       V+
Sbjct: 138 GQWQKQVPLAARASQRQWLVSIHAIRNTRRKMEDRHVSLPSFNQLFGLSDPVNRAYFAVF 197

Query: 322 DGHGGPDASRFLRSALFPHVQRFAKEQGGVTAE---AIRRAFGAAEEDFLHEVRQAWPKR 492
           DGHGG DA+R+       HV   A  Q  +  +   A+R AF   ++ FL   R+A  +R
Sbjct: 198 DGHGGVDAARYAA----VHVHTNAARQPELPTDPEGALREAFRRTDQMFL---RKAKRER 250

Query: 493 PRMAAVGSCCLLGAIAGDTLYV 558
            +    G C L   IAG TL+V
Sbjct: 251 LQSGTTGVCAL---IAGATLHV 269

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>PPM1F_MOUSE (Q8CGA0) Ca(2+)/calmodulin-dependent protein kinase phosphatase (EC|
           3.1.3.16) (CaM-kinase phosphatase) (CaMKPase) (Protein
           phosphatase 1F)
          Length = 452

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = +1

Query: 316 VYDGHGGPDASRFLRSALFPHVQRFAKEQGGV---TAEAIRRAFGAAEEDFLHEVRQAWP 486
           V+DGHGG DA+R+       HV   A  Q  +    A A++ AF   +E FL + ++   
Sbjct: 193 VFDGHGGVDAARYAS----VHVHTNASHQPELRTNPAAALKEAFRLTDEMFLQKAKR--- 245

Query: 487 KRPRMAAVGSCCLLGAIAGDTLYV 558
           +R +    G C L   IAG  L+V
Sbjct: 246 ERLQSGTTGVCAL---IAGAALHV 266

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>PP2CL_MOUSE (Q8BHN0) Protein phosphatase 2C isoform epsilon (EC 3.1.3.16)|
           (PP2C-epsilon) (Protein phosphatase 1L) (Protein
           phosphatase 1-like)
          Length = 360

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
 Frame = +1

Query: 205 ELRPHAAGEFSMAAAQANLVMEDQAQVLASPA----ATLVGVYDGHGGPDASRFLRS--- 363
           E + H    +S+   + +  MED+ +VL   A     ++ G++DGHGG  A+ +++S   
Sbjct: 87  EFKSHNVAVYSIQGRRDH--MEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLP 144

Query: 364 -ALFPHVQRFAKEQ 402
            AL  H+Q + K++
Sbjct: 145 EALKQHLQDYEKDK 158

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>PP2CL_HUMAN (Q5SGD2) Protein phosphatase 2C isoform epsilon (EC 3.1.3.16)|
           (PP2C-epsilon) (Protein phosphatase 1L) (Protein
           phosphatase 1-like)
          Length = 360

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
 Frame = +1

Query: 205 ELRPHAAGEFSMAAAQANLVMEDQAQVLASPA----ATLVGVYDGHGGPDASRFLRS--- 363
           E + H    +S+   + +  MED+ +VL   A     ++ G++DGHGG  A+ +++S   
Sbjct: 87  EFKNHNVAVYSIQGRRDH--MEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLP 144

Query: 364 -ALFPHVQRFAKEQ 402
            AL  H+Q + K++
Sbjct: 145 EALKQHLQDYEKDK 158

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>PPM1F_RAT (Q9WVR7) Ca(2+)/calmodulin-dependent protein kinase phosphatase (EC|
           3.1.3.16) (CaM-kinase phosphatase) (CaMKPase) (Partner
           of PIX 2) (Protein phosphatase 1F)
          Length = 450

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = +1

Query: 316 VYDGHGGPDASRFLRSALFPHVQRFAKEQGGV---TAEAIRRAFGAAEEDFLHEVRQAWP 486
           V+DGHGG DA+R+       HV   A  Q  +    A A++ AF   ++ FL + ++   
Sbjct: 192 VFDGHGGVDAARYAS----VHVHTNASHQPELLTDPAAALKEAFRHTDQMFLQKAKR--- 244

Query: 487 KRPRMAAVGSCCLLGAIAGDTLYV 558
           +R +    G C L   I G  L+V
Sbjct: 245 ERLQSGTTGVCAL---ITGAALHV 265

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>PTP1_ENCCU (O76942) Major polar tube protein precursor (Major PTP)|
          Length = 395

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 28/100 (28%), Positives = 41/100 (41%)
 Frame = -3

Query: 455 SSSAAPNALRIASAVTPPCSLAKRWTWGKRAERRKREASGPPCPSYTPTSVAAGEASTCA 276
           S+S A   L    + T  CS A   T G++   ++        PSY       G  + CA
Sbjct: 9   SASIALMKLENVYSATALCSNAYGLTPGQQGMAQQ--------PSYVLIPSTPGTIANCA 60

Query: 275 WSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAAPGGQC 156
             S    + + A   SP   G++S  ++ PSA A   G C
Sbjct: 61  SGSQDTYSPSPAAPTSPVTPGKTSENETSPSAPAEDVGTC 100

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>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum|
           protein MSE55)
          Length = 391

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -3

Query: 344 ASGPPCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQ-SMPSAAAAP 168
           A+ PP P+  PT  AA   +T A          AA  ++PAA           P+A++ P
Sbjct: 228 AANPPAPTANPTGPAANPPATTA-----NPPAPAANPSAPAATPTGPAANPPAPAASSTP 282

Query: 167 GGQCP 153
            G CP
Sbjct: 283 HGHCP 287

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>PP2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC 3.1.3.16)|
           (PP2C)
          Length = 491

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 307 LVGVYDGHGGPDASRFLRSALFPHVQRFAKEQGGVTAEAIRRAF 438
           + GVYDGHGG + S+F  + L   ++     +    AE +++AF
Sbjct: 52  MFGVYDGHGGTEVSKFTSAKLPDFLKERKFWEADDVAECLQKAF 95

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>VGLI_BHV1S (Q08102) Glycoprotein I|
          Length = 380

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 34/127 (26%), Positives = 45/127 (35%)
 Frame = -3

Query: 533 APSRQQEPTAAIRGRLGQAWRTSCRKSSSAAPNALRIASAVTPPCSLAKRWTWGKRAERR 354
           APSRQ  P A+               S+S    AL  +    PP           R    
Sbjct: 184 APSRQSRPAAS-----------GLTSSASLYDRALARSPQAPPP-----------RPAPP 221

Query: 353 KREASGPPCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAA 174
           +   +GP  P     +    EA+T A S+       A    SPAA    +   + P+AAA
Sbjct: 222 RAARAGPRRPERVDETTEV-EAATRAGSAFALTTPPAGPTASPAASPSRAFSAAAPAAAA 280

Query: 173 APGGQCP 153
            P G  P
Sbjct: 281 QPAGDTP 287

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>PP2C2_SCHPO (Q09172) Protein phosphatase 2C homolog 2 (EC 3.1.3.16) (PP2C-2)|
          Length = 370

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = +1

Query: 289 ASPAATLVGVYDGHGGPDASRFLRSALFPHVQRFAKEQGGVTAEAIRRAFGAAEEDFLHE 468
           ++P  +  GV+DGHGG   +++ R  L   ++       G   EA++  F AA+   + +
Sbjct: 52  SNPPTSFFGVFDGHGGDRVAKYCRQHLPDIIKSQPSFWKGNYDEALKSGFLAADNALMQD 111

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>T7L1C_XENLA (P70063) Transcription factor 7-like 1-C (HMG box transcription|
           factor 3-C) (TCF-3-C) (xTcf-3c)
          Length = 550

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
 Frame = -3

Query: 509 TAAIRGRLGQAWRTSCRKSSSA----APNALRIASAVTPPCSLAKRWTWGKRAERRKREA 342
           +AAI   LG+ W +  R+  +     A    ++ S + P  S + R  +GK+ ++RKRE 
Sbjct: 350 SAAINQILGRRWHSLSREEQAKYYELARKERQLHSQLYP--SWSARDNYGKK-KKRKREK 406

Query: 341 SGPPCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAA 171
             P   +YT T     +      S  +  +   +M +SPA     S   + P+A AA
Sbjct: 407 QSPEMENYTKTKKMCVQHFPSDKSCDSPASSHGSMLDSPAT---PSAALASPAAPAA 460

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>T7L1B_XENLA (Q90ZB6) Transcription factor 7-like 1-B (HMG box transcription|
           factor 3-B) (TCF-3-B) (xTcf-3)
          Length = 551

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
 Frame = -3

Query: 509 TAAIRGRLGQAWRTSCRKSSSA----APNALRIASAVTPPCSLAKRWTWGKRAERRKREA 342
           +AAI   LG+ W +  R+  +     A    ++ S + P  S + R  +GK+ ++RKRE 
Sbjct: 351 SAAINQILGRRWHSLSREEQAKYYELARKERQLHSQLYP--SWSARDNYGKK-KKRKREK 407

Query: 341 SGPPCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAA 171
             P   +YT T     +      S  +  +   +M +SPA     S   + P+A AA
Sbjct: 408 QSPEMENYTKTKKMCVQHFPSDKSCDSPASSHGSMLDSPAT---PSAALASPAAPAA 461

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>TNR8_HUMAN (P28908) Tumor necrosis factor receptor superfamily member 8|
           precursor (CD30L receptor) (Lymphocyte activation
           antigen CD30) (KI-1 antigen)
          Length = 595

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -3

Query: 362 ERRKREASGP-PCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMP 186
           E  K  +SG  P    TP S A   AST      TRLA  AA + + A    SSV +   
Sbjct: 164 ENCKEPSSGTIPQAKPTPVSPATSSASTMPVRGGTRLAQEAASKLTRAPDSPSSVGRPSS 223

Query: 185 SAAAAPGGQCPQ 150
               +P   CP+
Sbjct: 224 DPGLSPTQPCPE 235

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>AMOT_HUMAN (Q4VCS5) Angiomotin|
          Length = 1084

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = -3

Query: 314  PTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAA 174
            P +VAA  A   A +     A A A   SPAA G+     S+ SAAA
Sbjct: 912  PVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAA 958

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>RNC_PELCD (Q3A4Q8) Ribonuclease III (EC 3.1.26.3) (RNase III)|
          Length = 232

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 274 QAQVLASPAATLVGVYDGHGGPDASRFLRSALF-PHVQRFAKEQGGV 411
           ++ +LA+    L+G     GG D+ R +  ALF PH+QR A+ + GV
Sbjct: 116 KSSLLANTMEALLGAVFCDGGFDSVRRVIEALFIPHIQRAARRKTGV 162

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>RCOR1_HUMAN (Q9UKL0) REST corepressor 1 (Protein CoREST)|
          Length = 482

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 21/52 (40%), Positives = 23/52 (44%)
 Frame = -3

Query: 302 AAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAAPGGQCPQH 147
           AA  AS  A S+    ACA     SPAA   S    S  SAAAA     P +
Sbjct: 18  AAASASAAAASAAASAACA-----SPAATAASGAAASSASAAAASAAAAPNN 64

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>PP2C3_YEAST (P34221) Protein phosphatase 2C homolog 3 (EC 3.1.3.16) (PP2C-3)|
          Length = 468

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/73 (23%), Positives = 34/73 (46%)
 Frame = +1

Query: 250 QANLVMEDQAQVLASPAATLVGVYDGHGGPDASRFLRSALFPHVQRFAKEQGGVTAEAIR 429
           + NL+ E   + LA       G++DGHGG   + F  S +   +++    + G+  + + 
Sbjct: 43  EPNLLAESDEEHLA-----FYGIFDGHGGSSVAEFCGSKMISILKKQESFKSGMLEQCLI 97

Query: 430 RAFGAAEEDFLHE 468
             F A + + L +
Sbjct: 98  DTFLATDVELLKD 110

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>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich|
           protein 1)
          Length = 254

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
 Frame = -3

Query: 545 SPAMAPSRQQEPTAAIRGRLGQAWRTSCRKSSSAAPNALRI-ASAVTPPCSLAKRWTWGK 369
           S + AP+    P+++       A  +S  KSSSAAP++    +S+  P  S AK  +   
Sbjct: 120 SSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAPSSSEAKSSSAAPSSSEAKSSSAAP 179

Query: 368 RAERRKREASGPPCPSYTPTSVAAGE--ASTCAWSSMT 261
            +   K  ++ P       TS A     A T A S +T
Sbjct: 180 SSSEAKSSSAAPSSTEAKITSAAPSSTGAKTSAISQIT 217



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 22/95 (23%), Positives = 40/95 (42%)
 Frame = -3

Query: 455 SSSAAPNALRIASAVTPPCSLAKRWTWGKRAERRKREASGPPCPSYTPTSVAAGEASTCA 276
           SSSAAP++    ++   P S A   +    +    + +S  P  S   +S AA  +S   
Sbjct: 114 SSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAPSSSEAKSSSAAPSSSEAK 173

Query: 275 WSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAA 171
            SS    +  A   ++  +   + +  + PS+  A
Sbjct: 174 SSSAAPSSSEAKSSSAAPSSTEAKITSAAPSSTGA 208

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>SQHC_ZYMMO (P33990) Squalene--hopene cyclase (EC 5.4.99.17)|
          Length = 658

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 412 TAEAIRRAFGAAEEDFLHEVRQAWPKRPRMAAVGSC 519
           + + I R F +A +  LH+V   WPK  R  A+ SC
Sbjct: 218 SGDPIWRRFFSALDKVLHKVEPYWPKNMRAKAIHSC 253

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>RL22_DROME (P50887) 60S ribosomal protein L22|
          Length = 299

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 4/128 (3%)
 Frame = -3

Query: 545 SPAMAPSRQQ-EPTAAIRGRLGQAWRTSCRKSSSAAPNALRIASAVTPPCS---LAKRWT 378
           +PA A ++ + E   A   +   A   + +K+S AA +    A+A  P  +    AK   
Sbjct: 25  APAAAAAKGKVEKPKAEAAKPAAAAAKNVKKASEAAKDVKAAAAAAKPAAAKPAAAKPAA 84

Query: 377 WGKRAERRKREASGPPCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVC 198
             K A ++   A+ P   +    + A  +A+    ++ T  A   A + +PA     +  
Sbjct: 85  ASKDAGKKAPAAAAPKKDAKAAAAPAPAKAAPAKKAASTPAAAPPAKKAAPAKAAAPAAA 144

Query: 197 QSMPSAAA 174
              P+AAA
Sbjct: 145 APAPAAAA 152

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>VID21_GIBZE (Q4IB96) Chromatin modification-related protein VID21|
          Length = 1629

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = -3

Query: 317  TPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAAPGGQ 159
            TP +V AG+ S  A ++    A AAA  N     GR +V   + +AAAA  GQ
Sbjct: 1257 TPAAVQAGQNSAQAAAAA---AAAAAAANGMNGVGRVNVPNQLAAAAAAATGQ 1306

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>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein|
           5.8) (Ultrahigh sulfur keratin-associated protein 5.8)
           (Keratin, ultra high-sulfur matrix protein B) (UHS
           keratin B) (UHS KerB)
          Length = 187

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -3

Query: 329 CPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGR---SSVCQS 192
           C  Y P   ++G  S+C  SS  +  C+ +    P +C     SS CQS
Sbjct: 88  CSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSSCCQS 136

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>KCNQ1_HUMAN (P51787) Potassium voltage-gated channel subfamily KQT member 1|
           (Voltage-gated potassium channel subunit Kv7.1) (IKs
           producing slow voltage-gated potassium channel alpha
           subunit KvLQT1) (KQT-like 1)
          Length = 676

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = -3

Query: 425 IASAVTPPCSLAKRWTWGKRAERRKREAS-GPPCPSYTPTSVAAGEASTCAWSSMTRLAC 249
           +A+A +PP +  KRW WG+    R+  A     CP ++      G A    ++ +   A 
Sbjct: 1   MAAASSPPRAERKRWGWGRLPGARRGSAGLAKKCP-FSLELAEGGPAGGALYAPIAPGAP 59

Query: 248 AAAMENSPAA 219
             A   SPAA
Sbjct: 60  GPAPPASPAA 69

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>DHRS1_MOUSE (Q99L04) Dehydrogenase/reductase SDR family member 1 (EC 1.1.-.-)|
          Length = 313

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/64 (25%), Positives = 26/64 (40%)
 Frame = -3

Query: 464 CRKSSSAAPNALRIASAVTPPCSLAKRWTWGKRAERRKREASGPPCPSYTPTSVAAGEAS 285
           C  + +  PN L ++  V P C LA+R+          ++  G P   Y     A  + S
Sbjct: 235 CVVALATDPNILNLSGKVLPSCDLARRY--------GLKDIDGRPVKDYFSLGYALSQVS 286

Query: 284 TCAW 273
           +  W
Sbjct: 287 SLGW 290

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>MUTS_THIDA (Q3SJP0) DNA mismatch repair protein mutS|
          Length = 850

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +1

Query: 148 CCGHWPPGAAAADGMLWQTELRPHAAGEFSMAAAQANLVMEDQAQVLASPAATLVGVYDG 327
           CCG W P A+A  G + Q   R  A+ + +   +   + M + A +L S  A  + + D 
Sbjct: 629 CCGLWVPAASARIGAIDQIFTRIGASDDLAGGRSTFMVEMTETANILHSATADSLVLLDE 688

Query: 328 HG 333
            G
Sbjct: 689 IG 690

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>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
 Frame = -3

Query: 335  PPCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSP----------AACGRSSVCQSMP 186
            PP PS  P+S A+  AS  +W  +   A AA   + P          ++C  S V  SMP
Sbjct: 3620 PPPPSAAPSSSASPHASRKSWPPVGSRASAAKPPSFPPLSSSSTVTSSSCSTSGVQPSMP 3679

Query: 185  S 183
            +
Sbjct: 3680 T 3680

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>T7L1D_XENLA (P70064) Transcription factor 7-like 1-D (HMG box transcription|
           factor 3-D) (TCF-3-D) (xTcf-3d)
          Length = 550

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
 Frame = -3

Query: 509 TAAIRGRLGQAWRTSCRKSSSA----APNALRIASAVTPPCSLAKRWTWGKRAERRKREA 342
           +AAI   LG+ W +  R+  +     A    ++ S + P  S + R  +GK+ ++RKRE 
Sbjct: 350 SAAINQILGRRWHSLSREEQAKYYELARKERQLHSQLYP--SWSARDNYGKK-KKRKREK 406

Query: 341 SGPPCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAAPGG 162
             P   +YT T     +      S  +  +   +M +SPA    +      P+A  +   
Sbjct: 407 QSPEMENYTKTKKMCVQHFPSDKSCDSPASSHGSMLDSPATPSAALASPREPAATHSEEA 466

Query: 161 Q 159
           Q
Sbjct: 467 Q 467

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>CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5) (Cholinesterase-related
           cell division controller)
          Length = 1512

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
 Frame = -3

Query: 473 RTSCRKSSSAAPNALRIASAVTPPCSLAKRWTWGKRAERRKREASGPPCPSYTPTSVAAG 294
           R    KS S++ +  R  SA     S + R     +A R + ++S  P  +Y     A  
Sbjct: 242 RAEVAKSGSSSSSGGRRKSASATSSSSSSRKDRDSKAHRSRTKSSKEPPSAYKEPPKAYR 301

Query: 293 EAST--CAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAAPGGQCP 153
           E  T   A+     L+     ++SP +   S   +S  S + A GG  P
Sbjct: 302 EDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSSP 350

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>AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein) (Phosphoprotein F1-20)
          Length = 901

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
 Frame = -3

Query: 344 ASGPP----CPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRS-----SVCQS 192
           ++ PP     PS  PT+VAA  A+T A ++ T  A  +A   + AA   +      +  S
Sbjct: 509 STAPPVPATAPSPAPTAVAATAATTTAAAAATTTATTSAAAATTAAAPPALDIFGDLFDS 568

Query: 191 MPSAAAAP 168
            P  AAAP
Sbjct: 569 APEVAAAP 576

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>KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-associated protein|
           5.7) (Ultrahigh sulfur keratin-associated protein 5.7)
           (Keratin-associated protein 5-3) (Keratin-associated
           protein 5.3)
          Length = 165

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
 Frame = -3

Query: 329 CPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGR---SSVCQS 192
           C  Y P   ++G  S+C  SS  +  C  +    P  C     SS CQS
Sbjct: 95  CSCYKPCCCSSGCGSSCCQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQS 143

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>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
 Frame = -3

Query: 548 VSPAMAPSRQQEPTAAIRGRLGQAWRTSCRKSSSAAPNAL--RIASAVTPPCSLAKRWTW 375
           +SPA +PS  + P AA R     +  +S   SSS++ ++        V P   LA     
Sbjct: 358 LSPARSPSAPRAPAAAARRSASSSSSSSSSSSSSSSSSSSEGEEDEGVRPGAPLA----- 412

Query: 374 GKRAERRKREASGPPCPSYTPTSVAAGEASTCAWS 270
                 R      PP P+  P   A+  +S+ A S
Sbjct: 413 ------RAGPPPSPPAPAAAPRPSASSASSSAAAS 441

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>FOXO1_HUMAN (Q12778) Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)|
          Length = 655

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
 Frame = -3

Query: 443 APNALRIASAVTP-PCSLAKRWTWGKRAERRKREASGPPCPSYTPTS---VAAG--EAST 282
           AP  + I     P P   +  W   +    +   A+  P PS +  +    AAG   AS 
Sbjct: 4   APQVVEIDPDFEPLPRPRSCTWPLPRPEFSQSNSATSSPAPSGSAAANPDAAAGLPSASA 63

Query: 281 CAWSS--MTRLACAAAMENSPAACGRSSVCQSMPSAAAAPGGQC 156
            A S+  M+ L+     E+ P A G  +   +  +AAAA GG C
Sbjct: 64  AAVSADFMSNLSLLEESEDFPQAPGSVAAAVAAAAAAAATGGLC 107

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>VTDB_HUMAN (P02774) Vitamin D-binding protein precursor (DBP) (Group-specific|
           component) (Gc-globulin) (VDB)
          Length = 474

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = -3

Query: 362 ERRKREASGPPCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSP 225
           + R    S   C S +P  V  G A  C    + R  C AA+++ P
Sbjct: 85  DTRTSALSAKSCESNSPFPVHPGTAECCTKEGLERKLCMAALKHQP 130

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>MSH4_MOUSE (Q99MT2) MutS protein homolog 4 (mMsh4)|
          Length = 958

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
 Frame = -3

Query: 407 PPCSLAKRWTWGKRAERRKREASGPPCPSYTPTSVAAGEASTCAWSSMTR-------LAC 249
           PPC       W  R+  R+    G           AA  +S+  W+   R       LA 
Sbjct: 20  PPCQRCGLQPWSARSHARR--TLGVRKAGEMLRQEAASLSSSPRWTPSRRDAPCGRTLAS 77

Query: 248 AAAMENSPAACGRSSVCQSMPSAAAAPG 165
           A+      A   RSS   S P+ A+APG
Sbjct: 78  ASRPSTEGAMADRSSSSSSSPAPASAPG 105

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>DHRS1_HUMAN (Q96LJ7) Dehydrogenase/reductase SDR family member 1 (EC 1.1.-.-)|
          Length = 313

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/64 (26%), Positives = 24/64 (37%)
 Frame = -3

Query: 464 CRKSSSAAPNALRIASAVTPPCSLAKRWTWGKRAERRKREASGPPCPSYTPTSVAAGEAS 285
           C  + +  PN L ++  V P C LA+R+          R+  G P   Y   S      S
Sbjct: 235 CVVALATDPNILSLSGKVLPSCDLARRY--------GLRDVDGRPVQDYLSLSSVLSHVS 286

Query: 284 TCAW 273
              W
Sbjct: 287 GLGW 290

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>VSP1_BOTJA (P81824) Platelet-aggregating proteinase PA-BJ (EC 3.4.21.-)|
          Length = 232

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
 Frame = -3

Query: 377 WGKRAERRKREASGPPCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAAC----GR 210
           WGK +  ++     P C        A   A+   W + +   CA  ++     C    G 
Sbjct: 123 WGKISSTKETYPDVPHCAKINILDHAVCRAAYTWWPATSTTLCAGILQGGKDTCEGDSGG 182

Query: 209 SSVCQSMPSAAAAPGGQCPQ 150
             +C  +    +  G  C Q
Sbjct: 183 PLICNGLQGIVSGGGNPCGQ 202

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>EVL_MOUSE (P70429) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 414

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -2

Query: 531 PEQAAGADG-GHPRALGPGLADLVQEVLLRRAERPPDRLRGHAP 403
           P  A GA G  H  +   GLA  +    LRR +RP D   G +P
Sbjct: 202 PLPAGGAQGTNHDESSASGLAAALAGAKLRRVQRPEDASGGSSP 245

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>PDP2_RAT (O88484) [Pyruvate dehydrogenase [lipoamide]]-phosphatase 2,|
           mitochondrial precursor (EC 3.1.3.43) (PDP 2) (Pyruvate
           dehydrogenase phosphatase, catalytic subunit 2) (PDPC 2)
          Length = 530

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 214 PHAAGEFSMAAAQANLVMEDQAQVLA--SPAATLVGVYDGHGGPDASRFLRSALF 372
           P++   F      AN  +ED+  V +      T+ G++DGHGG   ++ +   LF
Sbjct: 104 PNSVLRFESNQLAANSPVEDRQGVASCVQTRGTVFGIFDGHGGHACAQAVSERLF 158

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>FOXF2_HUMAN (Q12947) Forkhead box protein F2 (Forkhead-related protein FKHL6)|
           (Forkhead-related transcription factor 2) (FREAC-2)
           (Forkhead-related activator 2)
          Length = 444

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -3

Query: 326 PSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAAPG 165
           P     + AA   +T + SS +  +CA++  +S +A   S+ C+S     A  G
Sbjct: 31  PPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAG 84

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>CU38_LOCMI (P04375) Cuticle protein 38 (LM-38) (LM-ACP 38)|
          Length = 163

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = -3

Query: 344 ASGPPCPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAAP 168
           A+ P   ++     AA  A+T   S   R+  A A   +PA     ++  + P+ AAAP
Sbjct: 25  AAAPVAVAHAVAPAAASVANTYRISQTARVLAAPAAYAAPAVAAAPAIGYAAPAIAAAP 83

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>EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 393

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -2

Query: 531 PEQAAGADG-GHPRALGPGLADLVQEVLLRRAERPPDRLRGHAP 403
           P  A GA G  H  +   GLA  +    LRR +RP D   G +P
Sbjct: 202 PLPAGGAQGTNHDESSASGLAAALAGAKLRRVQRPEDASGGSSP 245

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>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein|
           5.3) (Ultrahigh sulfur keratin-associated protein 5.3)
           (Keratin-associated protein 5-9) (Keratin-associated
           protein 5.9) (UHS KerB-like)
          Length = 238

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -3

Query: 329 CPSYTPTSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSSVCQSMPSAAAAPGGQCPQ 150
           C  Y P   ++G  S+C  SS  + +C+ +    P  C +SS C+     ++  G  C Q
Sbjct: 129 CSCYKPCCCSSGCGSSCCQSSCCKPSCSQSSCCKP-CCSQSSCCKPC-CCSSGCGSSCCQ 186

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>M3K1_MOUSE (P53349) Mitogen-activated protein kinase kinase kinase 1 (EC|
           2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1)
           (MEKK 1)
          Length = 1493

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 16/115 (13%)
 Frame = -3

Query: 449 SAAPNALRIASAVTPPCSLAKRWTWGKRAERRKRE--------------ASGPPCPSYTP 312
           S AP A        P  +  +R  W +R  R+ R               A+ PPCPS +P
Sbjct: 37  SGAPAAGAAGLLREPGSAGRERADWRRRQLRKVRSVELDQLPEQPLFLAAASPPCPSTSP 96

Query: 311 TSVAAGEASTCAWSSMTRLACAAAMENSPAACGRSS--VCQSMPSAAAAPGGQCP 153
           +   A  A   A +S  + A       + + CG  S  +  +  S A +P G  P
Sbjct: 97  SPEPADAA---AGASRFQPAAGPPPPGAASRCGSHSAELAAARDSGARSPAGAEP 148

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>YGHU_ECOLI (Q46845) Hypothetical GST-like protein yghU|
          Length = 288

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +1

Query: 307 LVGVYDGHGGPDASRFLRSALFPHVQRFAKEQGGVTA----EAIRRAFGAAEEDFLHEVR 474
           L GVYD      A+ FL +  + HVQR+AKE G   A      + R  G   E  LHE  
Sbjct: 221 LGGVYD------AAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQ-LHERH 273

Query: 475 QA 480
            A
Sbjct: 274 DA 275

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>H14_RABIT (P02252) Histone H1.4 (Fragment)|
          Length = 73

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = -3

Query: 449 SAAPNALRIASAVTPPCSLAKRWTWGKRAERRKREASGPPCPSYTPTSVAAGEASTCAWS 270
           S AP      +    P +  K+    K A   KR+ASGPP       +VAA +  +    
Sbjct: 1   SEAPAETAAPAPAKSPATPVKKARKKKSAGAAKRKASGPPVSELITKAVAASKERSGVSL 60

Query: 269 SMTRLACAAA 240
           +  + A AAA
Sbjct: 61  AALKKALAAA 70


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,738,564
Number of Sequences: 219361
Number of extensions: 963311
Number of successful extensions: 4405
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 4051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4377
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result