>Y3550_ARATH (Q9MA63) Protein At3g05500|
          Length = 246

 Score =  120 bits (301), Expect = 3e-27
 Identities = 66/144 (45%), Positives = 87/144 (60%), Gaps = 8/144 (5%)
 Frame = +1

Query: 142 ERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAVRGVAG----RFHG 309
           E+ RL+ L F              +YA A+D SGPL+PGV++VE AV+ V G    ++H 
Sbjct: 18  EKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHD 77

Query: 310 VPFDVLAFVDRKVDGTVQELNRHLPPAVKSASAQACHAVHAVPELARQIASEARRSGV-- 483
           VP +VL ++D+KVD +V EL+R +PP VK  SAQA  A    P +AR +ASE RR+GV  
Sbjct: 78  VPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVE 137

Query: 484 --KGAAKDVYGMVEPVAKDLYVRY 549
              G AK VY   EP AK+LY  Y
Sbjct: 138 TASGMAKSVYSKYEPAAKELYANY 161

>SRP_VITRI (Q9SW70) Stress-related protein|
          Length = 248

 Score =  110 bits (276), Expect = 2e-24
 Identities = 62/144 (43%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
 Frame = +1

Query: 142 ERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAVRGVAG----RFHG 309
           E  RL+ L F              LY  A+++SGPL+PGV  VE  V+ V G    +F+ 
Sbjct: 16  EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYD 75

Query: 310 VPFDVLAFVDRKVDGTVQELNRHLPPAVKSASAQACHAVHAVPELARQIASEARRSGV-- 483
           VPF++L FVDRKV+ ++ EL RH+P  VK AS QA       PELA  +ASE +R GV  
Sbjct: 76  VPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVD 135

Query: 484 --KGAAKDVYGMVEPVAKDLYVRY 549
             K   K+VY   EP AK+L  +Y
Sbjct: 136 TAKNITKNVYSKCEPTAKELCSKY 159

>Y1A7_ORYSA (Q9FRA7) Hypothetical protein P0001A07.13|
          Length = 253

 Score =  108 bits (271), Expect = 8e-24
 Identities = 69/168 (41%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
 Frame = +1

Query: 70  APTSFQKPPRSFDSRAMADSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPL 249
           AP S  +P          +    AE  RLR L F               YA A+  +GPL
Sbjct: 8   APIS-NRPEEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPL 66

Query: 250 RPGVDAVESAVRGVAG----RFHGVPFDVLAFVDRKVDGTVQELNRHLPPAVKSASAQAC 417
           RPGVD VE  V+ V G    RFHGVP D+L F+DRKV  +VQEL+R +PP VK A     
Sbjct: 67  RPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEA----- 121

Query: 418 HAVHAVPELARQIASEARRSGV----KGAAKDVYGMVEPVAKDLYVRY 549
                 P LAR  A+E R++G+     G AK      EP A+DLY RY
Sbjct: 122 ------PGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRY 163

>SRPP_HEVBR (O82803) Small rubber particle protein (SRPP) (22 kDa rubber|
           particle protein) (22 kDa RPP) (Latex allergen Hev b 3)
           (27 kDa natural rubber allergen)
          Length = 204

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 46/138 (33%), Positives = 71/138 (51%)
 Frame = +1

Query: 130 SQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAVRGVAGRFHG 309
           +++ E  RL+ L F              LY  A+D SGPL+PGVD +E+ V+ V    + 
Sbjct: 2   AEEVEEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVYY 61

Query: 310 VPFDVLAFVDRKVDGTVQELNRHLPPAVKSASAQACHAVHAVPELARQIASEARRSGVKG 489
           +P + + FVD+ VD +V  L+  +PP +K  SAQ        P +   +AS    +GV+ 
Sbjct: 62  IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGVQE 121

Query: 490 AAKDVYGMVEPVAKDLYV 543
            AK +Y  +EP A+   V
Sbjct: 122 GAKALYANLEPKAEQYAV 139

>REF_HEVBR (P15252) Rubber elongation factor protein (REF) (Allergen Hev b 1)|
          Length = 137

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 52/133 (39%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
 Frame = +1

Query: 124 DSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAVRGVA--- 294
           + +QQ +   L+ LGF              +Y  A+D SGPL+PGVD +E  V+ VA   
Sbjct: 4   EDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPL 63

Query: 295 -GRFHGVPFDVLAFVDRKVDGTVQELNRHLPPAVKSASAQACHAVHAVPELARQIASEAR 471
             RF  +P   L FVD  V  +V  ++R LPP VK AS Q   A+ A PE AR +AS + 
Sbjct: 64  YNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQVVSAIRAAPEAARSLAS-SL 122

Query: 472 RSGVKGAAKDVYG 510
               K  AK  YG
Sbjct: 123 PGQTKILAKVFYG 135

>SRP_PHAVU (Q41112) Stress-related protein (PvSRP)|
          Length = 167

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 49/114 (42%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
 Frame = +1

Query: 214 LYALARDHSGPLRPGVDAVESAVRGVAG----RFHGVPFDVLAFVDRKVDGTVQELNRHL 381
           LY+ A++ +GPL+PGV+ VE AV+ V      RFH VP ++L + DRKV     EL+RH+
Sbjct: 6   LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVG----ELDRHV 61

Query: 382 PPAVKSASAQACHAVHAVPELARQIASEARRSGVKGAAKDVYGMVEPVAKDLYV 543
           P  VK  S+Q           AR + SE RR GV   AK VY   EP A+   V
Sbjct: 62  PSNVKKVSSQ-----------ARSVVSEVRRDGVSTFAKTVYSKYEPTAEQCAV 104

>Y2778_ARATH (O82246) Protein At2g47780|
          Length = 235

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
 Frame = +1

Query: 91  PPRSFDSRAMADSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAV 270
           PP S  S ++    +  +  +L+ L F              LY LA+D++GPL+ GV+ +
Sbjct: 22  PPSSSSSPSLV--VEDDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENI 79

Query: 271 ESAVRGVAG----RFHGVPFDVLAFVDRKVDGTVQELNRHLPPAVKSASAQACHAVHAVP 438
           E  VR V      +FH VPF +L FVDRKVD    ++  ++P  VK AS+QA        
Sbjct: 80  EDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQAL------- 132

Query: 439 ELARQIASEARRSGV----KGAAKDVYGMVEPVAK 531
                +A+E +R+GV    K  A+ V    EP A+
Sbjct: 133 ----TVATEVQRTGVVDTTKSIARSVRDKYEPAAE 163

>Y1736_ARATH (Q9FYF7) Protein At1g67360|
          Length = 240

 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
 Frame = +1

Query: 118 MADSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAVRGVAG 297
           M    + ++   L+ L F              LY  A+ +SGPL+  V+ VE AV  V  
Sbjct: 1   METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVT 60

Query: 298 ----RFHGVPFDVLAFVDRKVDGTVQELNRHLPPAVKSASAQACHAVHAVPELARQIASE 465
               +F  VP  +L F+D KV     + + H PP  K    QA   ++   E A+    E
Sbjct: 61  PVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKE 120

Query: 466 ARRSGVKGA 492
           AR  G K A
Sbjct: 121 ARTGGPKAA 129

>DMD_CAEEL (Q9TW65) Dystrophin-1|
          Length = 3674

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
 Frame = +1

Query: 220  ALARDHSGPLRPGVDAVESAVRGVAGRFHGVPFDVLAFVDRK-VDGTVQELNR------- 375
            A +RD        +D++E   R V  R +G+   V+    R+ V+G ++++ R       
Sbjct: 2279 ATSRDTCDTFWADIDSLEQLARDVVRRANGIRMAVIYTPSRENVEGVLRDVQRLKMSIGD 2338

Query: 376  --------HLPPAVKSASAQACHAVHAVPELARQIA 459
                    +LPPA+K A   A   V  + E A  IA
Sbjct: 2339 VKKRVQTANLPPAIKLAGKNAKRVVQVLTETATTIA 2374

>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase) (Isozyme 1B)
          Length = 348

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 27/92 (29%), Positives = 31/92 (33%), Gaps = 3/92 (3%)
 Frame = -3

Query: 473 RLASLAICLASSGXXXXXXXXXXXXXXXAGGRCRFSSCTVPSTFRSTKARTSKGTPWKRP 294
           R  S     ASSG                 G       T P+  RST    S+ +PW R 
Sbjct: 158 RRTSTTSTSASSGSSSAGSTGSRWTSASTRGASTSPRATPPTWQRSTSMPPSRASPWPRY 217

Query: 293 ATPLTADSTAS---TPGRSGPEWSLASA*SPA 207
                   TAS   T  R+G  WS  S  S A
Sbjct: 218 GRRWRTAGTASRTTTRTRTGRSWSTGSIVSAA 249

>HIS4_WOLSU (Q7M9W9) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 240

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = +1

Query: 289 VAGRFHGVPFDVLAFVDRKVDGTVQELNRHLPPAVKSASAQACHAVHAVPELA--RQIAS 462
           +A  F  VP D +   D   DGT++ +NR    A+  AS    H   A   LA   +I  
Sbjct: 149 LAALFREVPLDAIICTDISKDGTLEGINREFTQAIAEASG---HYTIASGGLASEEEIPL 205

Query: 463 EARRSGVKG 489
            A+  GV G
Sbjct: 206 LAQAKGVDG 214

>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)|
          Length = 1992

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 8/167 (4%)
 Frame = -3

Query: 479 PDRLASLAICLASSGXXXXXXXXXXXXXXXAGGRCRFSSCTVPSTFR------STKARTS 318
           P +LAS +   A +G               +      +S TVP   R        KAR S
Sbjct: 175 PTKLASKSATSAKAGCSTITDSSSAASTSSSSSAVASASSTVPPGARVKQGKDQNKARRS 234

Query: 317 KGTPWKRPATPLTADSTASTPGRSGPEWSLASA*SPAMHXXXXXXXXXTNPRRLSLGLSA 138
           +      P         + T G S  +W  A+  SP                ++SL  + 
Sbjct: 235 RSASSPSPRRSSREKEQSKTGGSSKFDW--AARFSP----------------KVSLPKTK 276

Query: 137 CWLESAIARESNERG--GFWKLVGANAKSTRRRWDFPPSFLPATAKT 3
             L  +   E+++ G  G    + +  KST++R + PP+ LP+  ++
Sbjct: 277 LSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSLRRS 323

>CYPK_STRCM (P41178) Granaticin polyketide synthase bifunctional|
           cyclase/dehydratase (ORF4)
          Length = 304

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +1

Query: 325 LAFVDRKVDGTVQELNRHLPPAVKSASAQACHAVHAVPELARQIASEARRSGVKGAAKDV 504
           L ++DR VD T     RHL  A  + ++   HA        R++ S      + GAAKDV
Sbjct: 122 LQWIDRAVDTT-----RHLELAALATTSNHAHAAEE-----RELLSFTDTCTIDGAAKDV 171

Query: 505 YGMV 516
           +  V
Sbjct: 172 FDFV 175

>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18|
           (EC 6.-.-.-) (RAD18 homolog)
          Length = 387

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -3

Query: 338 STKARTSKGTPWKRPATPLTADSTASTPGRSGPE 237
           ST+  TS G P    + PLT D T S  G  GP+
Sbjct: 353 STEPSTSNGFPATSVSPPLTIDLTNSQTGSDGPQ 386

>TRPF_HALMA (Q5V212) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)|
           (PRAI)
          Length = 214

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +1

Query: 262 DAVESAVRGVAGRFHGVPFDVLAFVDRKVDGTVQELNRHLPPAVKS 399
           DAV +A     G  HGVP D    VD   +GT + +   +PP V S
Sbjct: 16  DAVVTAGADAVGIIHGVPVDTPREVD---EGTAETIADGVPPFVTS 58

>PHTF1_HUMAN (Q9UMS5) Putative homeodomain transcription factor 1|
          Length = 762

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +1

Query: 367 LNRHLPPAVKSASAQACHAVH-----AVPELARQIASEARRSGVKGAAKDV 504
           L+RHL   VK  + + CH V      A  E      S+  RSGV G ++ +
Sbjct: 312 LSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSRSL 362


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,443,413
Number of Sequences: 219361
Number of extensions: 876213
Number of successful extensions: 3969
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3952
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)