ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13b07 |
|---|---|
| Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 71.2 bits (173), Expect = 2e-12 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 9/154 (5%) Frame = +1 Query: 106 TDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKL 285 TD LL AQ +LW + ++ M+L+ A+ L + AIH GGAAS S++++ + L S++ Sbjct: 9 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRV 68 Query: 286 PFLARLLRQLATAGVFTSTDAG---------TYRLNPLSYLLVDGVRIDGDASQTAIVRA 438 L RL+R L T VF + G Y L P+S LL+ +QT + Sbjct: 69 SSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGSQ--SSQLAQTPLAAM 126 Query: 439 AASRYYVEAAMGLADWFRKDFDGAVPSPFEDVHG 540 V L WF+ + P F+ HG Sbjct: 127 VLDPTIVSPFSELGAWFQHELPD--PCIFKHTHG 158
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 62.8 bits (151), Expect = 6e-10 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 4/132 (3%) Frame = +1 Query: 115 ELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPFL 294 +LLQAQ+ +W H + MSL+CA+ LG+P +H+ + S+L+ A+ + K Sbjct: 14 QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSF 73 Query: 295 ARLLRQLATAGVFTSTDAGT----YRLNPLSYLLVDGVRIDGDASQTAIVRAAASRYYVE 462 RL+R L + F ++ Y L P S LL+ G + + +V+ + Sbjct: 74 QRLMRALVNSNFFIEENSNNQEVCYWLTPASRLLLKGAPL----TVAPLVQVVLDPTFTN 129 Query: 463 AAMGLADWFRKD 498 +++WF+ + Sbjct: 130 PWHYMSEWFKHE 141
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 62.0 bits (149), Expect = 1e-09 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 6/142 (4%) Frame = +1 Query: 82 AAEKVFVPTDAE-LLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVA 258 A +KV + E LLQAQ +W H + MSL+CA+ LG+P +H+ G + S+L+ Sbjct: 2 ALQKVDISLSTEQLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQ 61 Query: 259 ALSLPASKLPFLARLLRQLATAGVF-----TSTDAGTYRLNPLSYLLVDGVRIDGDASQT 423 ++ + K RL+R L + F ++ Y L P S LL+ + + T Sbjct: 62 SIPINKEKTQCFQRLMRALVNSNFFIEENNSNNQEVCYWLTPASCLLLK----EAPLTVT 117 Query: 424 AIVRAAASRYYVEAAMGLADWF 489 +V+ + +++WF Sbjct: 118 PLVQVVLDPTFTNPWHHMSEWF 139
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 60.8 bits (146), Expect = 2e-09 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 2/96 (2%) Frame = +1 Query: 112 AELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPF 291 +E+ +AQ+ L++H ++ MSL+ AV + +P IH G S S LV+ L +P+SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGN 70 Query: 292 LARLLRQLATAGVF--TSTDAGTYRLNPLSYLLVDG 393 + RL+R LA G F + + +Y L S LLV G Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRG 106
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 58.9 bits (141), Expect = 9e-09 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 2/96 (2%) Frame = +1 Query: 112 AELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPF 291 +E+ +AQ+ L++H ++ MSL+ AV++ +P I G S S LV+ L +P+SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 292 LARLLRQLATAGVF--TSTDAGTYRLNPLSYLLVDG 393 + RL+R LA G F + + +Y L S LLV G Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRG 106
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 58.9 bits (141), Expect = 9e-09 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 2/96 (2%) Frame = +1 Query: 112 AELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPF 291 +E+ +AQ+ L++H ++ MSL+ AV++ +P I G S S LV+ L +P+SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 292 LARLLRQLATAGVF--TSTDAGTYRLNPLSYLLVDG 393 + RL+R LA G F + + +Y L S LLV G Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRG 106
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 51.2 bits (121), Expect = 2e-06 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 5/96 (5%) Frame = +1 Query: 121 LQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPFLAR 300 ++AQ+ +W+H + + LR V LG+P IH G + S+LV L L ++ + Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHN-NGPVTLSQLVTHLPLKSTSIDRFHH 71 Query: 301 LLRQLATAGVFT-STDAGT----YRLNPLSYLLVDG 393 +R L +FT STD T Y L P S LLV G Sbjct: 72 FMRYLVHMQLFTISTDQITKEDKYELTPASKLLVHG 107
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 38.1 bits (87), Expect = 0.016 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Frame = +1 Query: 121 LQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPFLAR 300 L +Q+ LW + + L+CAV L + IH G + + SEL + L L R Sbjct: 8 LSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYR 67 Query: 301 LLRQLATAGVFTSTDAG---TYRLNPLSYLLVDG 393 ++R L +FT Y L P + LV G Sbjct: 68 VMRYLVHMKLFTKASIDGELRYGLAPPAKYLVKG 101
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 34.7 bits (78), Expect = 0.18 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Frame = +1 Query: 121 LQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPFLAR 300 ++AQ+ +W+ + + LRCAV+LG+ I + ++L + L + L R Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYR 71 Query: 301 LLRQLATAGVF--TSTDAG--TYRLNPLSYLL 384 +LR L + +D G Y L P++ LL Sbjct: 72 ILRYLVKMEILRVEKSDDGQKKYALEPIATLL 103
>BGLT_THEMA (Q9X108) 6-phospho-beta-glucosidase bglT (EC 3.2.1.86)| Length = 415 Score = 32.7 bits (73), Expect = 0.68 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Frame = -2 Query: 543 GAVHVLERRGHGPVEVLPE------PVGQAHGRLHVVARGRGAH 430 G +H++ R +G +E LP+ P GR+H +++G+G H Sbjct: 310 GKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDH 353
>IEMT_CLABR (O04385) (Iso)eugenol O-methyltransferase (EC 2.1.1.146)| (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase) (IEMT) Length = 368 Score = 32.3 bits (72), Expect = 0.89 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Frame = +1 Query: 85 AEKVFVPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRL---GGAASPSELV 255 AE +PT + +A + + + PM+L+ A++L V + + G SP+E+ Sbjct: 7 AEIQIIPTHSSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIA 66 Query: 256 AALSLPASKLP-FLARLLRQLATAGVFTST 342 A L + P L R+LR LA+ V T T Sbjct: 67 AQLPTTNPEAPVMLDRVLRLLASYSVVTYT 96
>OMT1_ARATH (Q9FK25) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (AtOMT1)| (Flavonol 3-O-methyltransferase 1) Length = 363 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Frame = +1 Query: 76 GQAAEKVFVPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELV 255 G AE P +A + + + PM+L+ A++L + + + G SP+E+ Sbjct: 2 GSTAETQLTPVQVTDDEAALFAMQLASASVLPMALKSALELDLLEIMAKNGSPMSPTEIA 61 Query: 256 AALSLPASKLP-FLARLLRQLATAGVFTSTD 345 + L + P L R+LR L + V T ++ Sbjct: 62 SKLPTKNPEAPVMLDRILRLLTSYSVLTCSN 92
>RBN_NEIMB (Q9K0R0) tRNA-processing ribonuclease BN (EC 3.1.-.-) (RNase BN)| Length = 406 Score = 30.8 bits (68), Expect = 2.6 Identities = 25/90 (27%), Positives = 38/90 (42%) Frame = +1 Query: 274 ASKLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRY 453 AS P + LR AT T G YR P ++ ++ A V A A+ + Sbjct: 170 ASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFV----------PARQAFVGALATAF 219 Query: 454 YVEAAMGLADWFRKDFDGAVPSPFEDVHGA 543 +E A L W+ +FDG + ++GA Sbjct: 220 CLETARSLFTWYMGNFDG-----YRSIYGA 244
>RBN_NEIMA (Q9JVT9) tRNA-processing ribonuclease BN (EC 3.1.-.-) (RNase BN)| Length = 408 Score = 30.8 bits (68), Expect = 2.6 Identities = 25/90 (27%), Positives = 38/90 (42%) Frame = +1 Query: 274 ASKLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRY 453 AS P + LR AT T G YR P ++ ++ A V A A+ + Sbjct: 170 ASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFV----------PARQAFVGALATAF 219 Query: 454 YVEAAMGLADWFRKDFDGAVPSPFEDVHGA 543 +E A L W+ +FDG + ++GA Sbjct: 220 CLETARSLFTWYMGNFDG-----YRSIYGA 244
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 30.0 bits (66), Expect = 4.4 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = -3 Query: 308 RSRRARNGSLDAGRDRAATS---SDGDAAPPRRWMAVGTPRSTAQRS 177 R RRA G+L GR +++S SD D +P R A P + A+RS Sbjct: 331 RRRRAGEGALRRGRGFSSSSSSGSDSDLSPARSPSAPRAPAAAARRS 377
>DMPM_STRMI (P42712) O-demethylpuromycin-O-methyltransferase (EC 2.1.1.38)| Length = 376 Score = 30.0 bits (66), Expect = 4.4 Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 1/93 (1%) Frame = +1 Query: 160 YLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSL-PASKLPFLARLLRQLATAGVFT 336 Y++ L A L +P + AA+ EL A+L P + L RLLR A G+ Sbjct: 51 YISSEILDLATRLDLPDLMGTEERAAA--ELAASLDTDPVATL----RLLRAFAALGLAE 104 Query: 337 STDAGTYRLNPLSYLLVDGVRIDGDASQTAIVR 435 T AG +RL P + L R D S A VR Sbjct: 105 ETGAGRFRLTPAGHRL----RTDVPDSLHAFVR 133
>SYL_STRAW (Q82C66) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 962 Score = 29.6 bits (65), Expect = 5.8 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +1 Query: 226 GGAASPSELVAALSLPASKLPFLARLLRQLATAGVFTSTDAGTYRLNPLS 375 GG A+P+E VAA A+ + R GVFT G Y NP+S Sbjct: 362 GGHATPAEAVAAYRAQAASKSDVERQAEAKDKTGVFT----GAYATNPVS 407
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 29.6 bits (65), Expect = 5.8 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 13/82 (15%) Frame = -3 Query: 287 GSLDAGRDRAATSSDGDAAPPRRWMAVGTP-----RSTAQRSDMGVR*QRLWRHRSD--- 132 GSL A A T S A P+R + TP R R D R +R RH D Sbjct: 30 GSLPASPQSAITVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERHERDRDH 89 Query: 131 -----CAWSSSASVGTNTFSAA 81 ++S +V TNT S++ Sbjct: 90 ERFAAVFSTASTTVPTNTSSSS 111
>PCDH8_HUMAN (O95206) Protocadherin-8 precursor (Arcadlin)| Length = 1070 Score = 29.3 bits (64), Expect = 7.6 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -2 Query: 537 VHVLERRGHGPVEVLPEPVGQAHGRLHVVARGRGAHD 427 V VL++ H PV V P P A+G L V GR A D Sbjct: 597 VRVLDQNDHAPVLVHPAP---ANGSLEVAVPGRTAKD 630
>TOP1_TREPA (O83409) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 731 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/67 (28%), Positives = 36/67 (53%) Frame = +1 Query: 274 ASKLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRY 453 A++L F +R Q+A ++ GT+R+ ++Y+ D VR+ A + VRA + + Sbjct: 279 ANRLGFTSRKTMQVAQQ-LYEGVSLGTHRVGLITYMRTDSVRVSEAAVKE--VRAWIATH 335 Query: 454 YVEAAMG 474 + +A G Sbjct: 336 FSDALPG 342
>ADA2A_BOVIN (Q28838) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) (Alpha-2D adrenergic receptor) Length = 452 Score = 28.9 bits (63), Expect = 9.9 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = -3 Query: 305 SRRARNGSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTA----QRSDMGVR*QRLWRHR 138 SRR+ G G+ RA+ GD+ P R A G TA +RS G + R WR R Sbjct: 309 SRRSERGPRAKGKARASQVKPGDSLPRRGPGATGLGAPTAGPAEERSGGGAKASR-WRGR 367 Query: 137 SD 132 + Sbjct: 368 QN 369
>MTMW_METWO (O59647) Modification methylase MwoI (EC 2.1.1.113) (N-4| cytosine-specific methyltransferase MwoI) (M.MwoI) Length = 668 Score = 28.9 bits (63), Expect = 9.9 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +1 Query: 484 WFRKDFDGAVPSPFEDV 534 WFRKDF G++P P EDV Sbjct: 589 WFRKDFGGSIPLP-EDV 604
>RNH2_STRR6 (Q8DPR3) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 259 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%) Frame = +1 Query: 376 YLLVDGVRIDGDASQTAIVRAAASRYYVEAAMGLA----DWFRKDFDGAVP 516 +LL+D +++D SQT+I++ A+ + AA +A D K++D P Sbjct: 164 HLLIDAMKLDLPISQTSIIKGDANSLSIAAASIVAKVTRDELMKEYDQQFP 214
>CWC21_NEUCR (Q7RYH7) Pre-mRNA-splicing factor cwc-21| Length = 344 Score = 28.9 bits (63), Expect = 9.9 Identities = 24/82 (29%), Positives = 28/82 (34%), Gaps = 9/82 (10%) Frame = -3 Query: 326 PAVASWRSRRARNGSLDAGRDRAATSSDGDA---------APPRRWMAVGTPRSTAQRSD 174 PA + R G D GR R D D APPR W TPR R Sbjct: 177 PAPSGPSGGNDRGGDRDRGRGRGFGRRDRDEGRLNSRERRAPPRDWDRPPTPRGRGGRGG 236 Query: 173 MGVR*QRLWRHRSDCAWSSSAS 108 G R + + +R S S Sbjct: 237 RGGRDREVDSYRGAAGRDRSRS 258 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,344,430 Number of Sequences: 219361 Number of extensions: 788357 Number of successful extensions: 3291 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3223 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3282 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
