ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13b04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 149 bits (75), Expect = 1e-32 Identities = 189/227 (83%) Strand = Plus / Plus Query: 340 gtgctcgtgcactaccacccgctcgccggccgcctcggcatcagcccggagatgaagctc 399 |||||||| |||||||||||||| || || || || |||||| |||||||||||||| Sbjct: 2891 gtgctcgtccactaccacccgctggcggggcggctgacgatcagcgcggagatgaagctc 2950 Query: 400 accgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccgcctgcgacctg 459 |||||||| |||||||||||||| |||||| | ||||| |||| | |||||| Sbjct: 2951 gccgtggagctcaccggcgagggcgccgtgttcgtcgccgccgacgccgggtacgacctc 3010 Query: 460 gccctcgtcggcgacctctccaccccggacccggccgcgctgggccagctcgtgtactcc 519 ||| ||||||||||||| ||| || ||||| |||||||| ||||| ||||| |||||| Sbjct: 3011 gccgacgtcggcgacctcaccaagcccgaccccgccgcgctcggccacctcgtctactcc 3070 Query: 520 gttcccggcgccaagaacatcctcgagatgccgcccatgacggcgca 566 | ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 3071 atccccggcgccaagaacatcctcgagatgccccccatgacggcgca 3117 Score = 133 bits (67), Expect = 7e-28 Identities = 93/102 (91%) Strand = Plus / Plus Query: 178 ctggtgtcgccggtggaggcgacgccnataggggagcagtactacctgtccaacctggac 237 |||||| |||||| |||||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 2723 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 2782 Query: 238 cagaacatcgcggtgatcgtgcagaccgtgtactgcttcaag 279 ||||||||||| |||||||||||||| |||||||||| |||| Sbjct: 2783 cagaacatcgccgtgatcgtgcagacggtgtactgctacaag 2824
>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0028G07, complete sequence Length = 157463 Score = 149 bits (75), Expect = 1e-32 Identities = 189/227 (83%) Strand = Plus / Plus Query: 340 gtgctcgtgcactaccacccgctcgccggccgcctcggcatcagcccggagatgaagctc 399 |||||||| |||||||||||||| || || || || |||||| |||||||||||||| Sbjct: 89208 gtgctcgtccactaccacccgctggcggggcggctgacgatcagcgcggagatgaagctc 89267 Query: 400 accgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccgcctgcgacctg 459 |||||||| |||||||||||||| |||||| | ||||| |||| | |||||| Sbjct: 89268 gccgtggagctcaccggcgagggcgccgtgttcgtcgccgccgacgccgggtacgacctc 89327 Query: 460 gccctcgtcggcgacctctccaccccggacccggccgcgctgggccagctcgtgtactcc 519 ||| ||||||||||||| ||| || ||||| |||||||| ||||| ||||| |||||| Sbjct: 89328 gccgacgtcggcgacctcaccaagcccgaccccgccgcgctcggccacctcgtctactcc 89387 Query: 520 gttcccggcgccaagaacatcctcgagatgccgcccatgacggcgca 566 | ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 89388 atccccggcgccaagaacatcctcgagatgccccccatgacggcgca 89434 Score = 133 bits (67), Expect = 7e-28 Identities = 93/102 (91%) Strand = Plus / Plus Query: 178 ctggtgtcgccggtggaggcgacgccnataggggagcagtactacctgtccaacctggac 237 |||||| |||||| |||||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 89040 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 89099 Query: 238 cagaacatcgcggtgatcgtgcagaccgtgtactgcttcaag 279 ||||||||||| |||||||||||||| |||||||||| |||| Sbjct: 89100 cagaacatcgccgtgatcgtgcagacggtgtactgctacaag 89141
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 149 bits (75), Expect = 1e-32 Identities = 189/227 (83%) Strand = Plus / Plus Query: 340 gtgctcgtgcactaccacccgctcgccggccgcctcggcatcagcccggagatgaagctc 399 |||||||| |||||||||||||| || || || || |||||| |||||||||||||| Sbjct: 17495194 gtgctcgtccactaccacccgctggcggggcggctgacgatcagcgcggagatgaagctc 17495253 Query: 400 accgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccgcctgcgacctg 459 |||||||| |||||||||||||| |||||| | ||||| |||| | |||||| Sbjct: 17495254 gccgtggagctcaccggcgagggcgccgtgttcgtcgccgccgacgccgggtacgacctc 17495313 Query: 460 gccctcgtcggcgacctctccaccccggacccggccgcgctgggccagctcgtgtactcc 519 ||| ||||||||||||| ||| || ||||| |||||||| ||||| ||||| |||||| Sbjct: 17495314 gccgacgtcggcgacctcaccaagcccgaccccgccgcgctcggccacctcgtctactcc 17495373 Query: 520 gttcccggcgccaagaacatcctcgagatgccgcccatgacggcgca 566 | ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 17495374 atccccggcgccaagaacatcctcgagatgccccccatgacggcgca 17495420 Score = 133 bits (67), Expect = 7e-28 Identities = 93/102 (91%) Strand = Plus / Plus Query: 178 ctggtgtcgccggtggaggcgacgccnataggggagcagtactacctgtccaacctggac 237 |||||| |||||| |||||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 17495026 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 17495085 Query: 238 cagaacatcgcggtgatcgtgcagaccgtgtactgcttcaag 279 ||||||||||| |||||||||||||| |||||||||| |||| Sbjct: 17495086 cagaacatcgccgtgatcgtgcagacggtgtactgctacaag 17495127 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 506 agctcgtgtactccgttcccggcgccaagaacatcctcgagatgcc 551 ||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 23144912 agctcgtgtacagcatccccggcgccaagaacgtcctcgagatgcc 23144867
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 149 bits (75), Expect = 1e-32 Identities = 189/227 (83%) Strand = Plus / Plus Query: 340 gtgctcgtgcactaccacccgctcgccggccgcctcggcatcagcccggagatgaagctc 399 |||||||| |||||||||||||| || || || || |||||| |||||||||||||| Sbjct: 17588904 gtgctcgtccactaccacccgctggcggggcggctgacgatcagcgcggagatgaagctc 17588963 Query: 400 accgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccgcctgcgacctg 459 |||||||| |||||||||||||| |||||| | ||||| |||| | |||||| Sbjct: 17588964 gccgtggagctcaccggcgagggcgccgtgttcgtcgccgccgacgccgggtacgacctc 17589023 Query: 460 gccctcgtcggcgacctctccaccccggacccggccgcgctgggccagctcgtgtactcc 519 ||| ||||||||||||| ||| || ||||| |||||||| ||||| ||||| |||||| Sbjct: 17589024 gccgacgtcggcgacctcaccaagcccgaccccgccgcgctcggccacctcgtctactcc 17589083 Query: 520 gttcccggcgccaagaacatcctcgagatgccgcccatgacggcgca 566 | ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 17589084 atccccggcgccaagaacatcctcgagatgccccccatgacggcgca 17589130 Score = 133 bits (67), Expect = 7e-28 Identities = 93/102 (91%) Strand = Plus / Plus Query: 178 ctggtgtcgccggtggaggcgacgccnataggggagcagtactacctgtccaacctggac 237 |||||| |||||| |||||||||||| | |||||| ||||||||||||||||||||||| Sbjct: 17588736 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 17588795 Query: 238 cagaacatcgcggtgatcgtgcagaccgtgtactgcttcaag 279 ||||||||||| |||||||||||||| |||||||||| |||| Sbjct: 17588796 cagaacatcgccgtgatcgtgcagacggtgtactgctacaag 17588837 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 506 agctcgtgtactccgttcccggcgccaagaacatcctcgagatgcc 551 ||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 23454822 agctcgtgtacagcatccccggcgccaagaacgtcctcgagatgcc 23454777
>ref|XM_463664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 217 tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276 |||||||| |||||||| |||||||||||||| || |||||||||||||| ||||||||| Sbjct: 115 tactacctctccaacctcgaccagaacatcgccgtcatcgtgcagaccgtctactgcttc 174 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 393 gaagctcaccgtggagtgcaccggcgagggcg 424 |||||| | |||||| |||||||||||||||| Sbjct: 294 gaagcttatcgtggactgcaccggcgagggcg 325
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 217 tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276 |||||||| |||||||| |||||||||||||| || |||||||||||||| ||||||||| Sbjct: 40501532 tactacctctccaacctcgaccagaacatcgccgtcatcgtgcagaccgtctactgcttc 40501591 Score = 54.0 bits (27), Expect = 5e-04 Identities = 126/159 (79%) Strand = Plus / Plus Query: 393 gaagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccgcctg 452 |||||| | |||||| |||||||||||||||| |||||| || |||| ||||| | Sbjct: 40501711 gaagcttatcgtggactgcaccggcgagggcgccgtgttcgtcgacgccgtggccgacgc 40501770 Query: 453 cgacctggccctcgtcggcgacctctccaccccggacccggccgcgctgggccagctcgt 512 || | ||||| | |||||||| || || ||| ||||| |||| || ||| ||||||| Sbjct: 40501771 cgccatggccgacctcggcgacatcacccgccccgaccccgccgtcctcggcgagctcgt 40501830 Query: 513 gtactccgttcccggcgccaagaacatcctcgagatgcc 551 ||| ||| ||||||||||||||| ||||||||||||| Sbjct: 40501831 ctacagcgtccccggcgccaagaacgtcctcgagatgcc 40501869 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 402 cgtggagtgcaccggcgagggcgtgccgttcgtggaggccg 442 ||||||||||||||||||||||| |||||||||||||| Sbjct: 10563011 cgtggagtgcaccggcgagggcgcctggttcgtggaggccg 10562971 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggcc 441 ||||| |||||||||||||| ||| ||||||||||||| Sbjct: 24392546 gtggactgcaccggcgagggggtgtggttcgtggaggcc 24392508 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 gtgcactaccacccgctcgccggc 369 ||||||||| |||||||||||||| Sbjct: 13940647 gtgcactactacccgctcgccggc 13940670
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 217 tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276 |||||||| |||||||| |||||||||||||| || |||||||||||||| ||||||||| Sbjct: 63156 tactacctctccaacctcgaccagaacatcgccgtcatcgtgcagaccgtctactgcttc 63215 Score = 54.0 bits (27), Expect = 5e-04 Identities = 126/159 (79%) Strand = Plus / Plus Query: 393 gaagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccgcctg 452 |||||| | |||||| |||||||||||||||| |||||| || |||| ||||| | Sbjct: 63335 gaagcttatcgtggactgcaccggcgagggcgccgtgttcgtcgacgccgtggccgacgc 63394 Query: 453 cgacctggccctcgtcggcgacctctccaccccggacccggccgcgctgggccagctcgt 512 || | ||||| | |||||||| || || ||| ||||| |||| || ||| ||||||| Sbjct: 63395 cgccatggccgacctcggcgacatcacccgccccgaccccgccgtcctcggcgagctcgt 63454 Query: 513 gtactccgttcccggcgccaagaacatcctcgagatgcc 551 ||| ||| ||||||||||||||| ||||||||||||| Sbjct: 63455 ctacagcgtccccggcgccaagaacgtcctcgagatgcc 63493
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 393 gaagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 ||||||| ||||||||||||||||||| || ||| |||||||||||| ||||| Sbjct: 16127140 gaagctctccgtggagtgcaccggcgaaggggtggtgttcgtggaggcggaggc 16127087 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 396 gctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 |||| ||||||||||||||||||| || ||| |||||||||||| ||||| Sbjct: 16018583 gctcgccgtggagtgcaccggcgaaggggtggtgttcgtggaggcggaggc 16018533 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 506 agctcgtgtactccgttcccggcgccaagaacatcctcgaga 547 ||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 10874338 agctcgtgtacaacgtccccggcgccaagaacgtcctcgaga 10874297 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 396 gctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 |||| ||||||||||||||| ||| || ||| |||||||||||| ||||| Sbjct: 16097884 gctcgccgtggagtgcaccgccgaaggggtggtgttcgtggaggcagaggc 16097834 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 394 aagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 |||||| | ||||||||||||||||| || ||| ||| |||||||| ||||| Sbjct: 16099987 aagctcgctgtggagtgcaccggcgaaggggtggtgtttgtggaggcggaggc 16099935 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 343 ctcgtgcactaccacccgctcgccggccgcct 374 |||||| ||||| ||||| ||||||||||||| Sbjct: 16050505 ctcgtgtactactacccgatcgccggccgcct 16050474
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 393 gaagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 ||||||| ||||||||||||||||||| || ||| |||||||||||| ||||| Sbjct: 16080373 gaagctctccgtggagtgcaccggcgaaggggtggtgttcgtggaggcggaggc 16080320 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 396 gctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 |||| ||||||||||||||||||| || ||| |||||||||||| ||||| Sbjct: 15971816 gctcgccgtggagtgcaccggcgaaggggtggtgttcgtggaggcggaggc 15971766 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 506 agctcgtgtactccgttcccggcgccaagaacatcctcgaga 547 ||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 10874037 agctcgtgtacaacgtccccggcgccaagaacgtcctcgaga 10873996 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 396 gctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 |||| ||||||||||||||| ||| || ||| |||||||||||| ||||| Sbjct: 16051117 gctcgccgtggagtgcaccgccgaaggggtggtgttcgtggaggcagaggc 16051067 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 394 aagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 |||||| | ||||||||||||||||| || ||| ||| |||||||| ||||| Sbjct: 16053220 aagctcgctgtggagtgcaccggcgaaggggtggtgtttgtggaggcggaggc 16053168 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 343 ctcgtgcactaccacccgctcgccggccgcct 374 |||||| ||||| ||||| ||||||||||||| Sbjct: 16003738 ctcgtgtactactacccgatcgccggccgcct 16003707
>emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165955 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 393 gaagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 ||||||| ||||||||||||||||||| || ||| |||||||||||| ||||| Sbjct: 116203 gaagctctccgtggagtgcaccggcgaaggggtggtgttcgtggaggcggaggc 116256 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 396 gctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 |||| ||||||||||||||| ||| || ||| |||||||||||| ||||| Sbjct: 145459 gctcgccgtggagtgcaccgccgaaggggtggtgttcgtggaggcagaggc 145509 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 394 aagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 |||||| | ||||||||||||||||| || ||| ||| |||||||| ||||| Sbjct: 143356 aagctcgctgtggagtgcaccggcgaaggggtggtgtttgtggaggcggaggc 143408
>ref|XM_475582.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 409 tgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||||||||||||||||| |||||| |||||||| |||| Sbjct: 280 tgcaccggcgagggcgtgctgttcgtcgaggccgacgccg 319
>ref|NM_197227.1| Oryza sativa (japonica cultivar-group) putative hypersensitivity-related (hsr)protein (OSJNBb0073N24.11), mRNA Length = 1662 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 393 gaagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||||| |||| || ||||||||||||||||||| |||| | |||||||| |||| Sbjct: 276 gaagctcgccgtcgactgcaccggcgagggcgtgctgttcatcgaggccgacgccg 331
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 393 gaagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||||| |||| || ||||||||||||||||||| |||| | |||||||| |||| Sbjct: 58456 gaagctcgccgtcgactgcaccggcgagggcgtgctgttcatcgaggccgacgccg 58511
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 393 gaagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||||| |||| || ||||||||||||||||||| |||| | |||||||| |||| Sbjct: 18697178 gaagctcgccgtcgactgcaccggcgagggcgtgctgttcatcgaggccgacgccg 18697233 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 217 tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276 |||||||| |||||||| |||||||||||||| | | ||||||||||| |||| |||| Sbjct: 12989005 tactacctctccaacctcgaccagaacatcgccatcgttgtgcagaccgtctactacttc 12989064 Query: 277 a 277 | Sbjct: 12989065 a 12989065 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 ggcgtgccgttcgtggaggccgag 444 |||||| ||||||||||||||||| Sbjct: 13098598 ggcgtggcgttcgtggaggccgag 13098575 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 1423255 cactactaccctctcgccggccgcctcg 1423282 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 1410355 cactactaccctctcgccggccgcctcg 1410382
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 409 tgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||||||||||||||||| |||||| |||||||| |||| Sbjct: 2315742 tgcaccggcgagggcgtgctgttcgtcgaggccgacgccg 2315703 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggccga 443 ||||||||||||||||||||||| |||||| |||||||| Sbjct: 14439757 gtggagtgcaccggcgagggcgtcgtgttcgtcgaggccga 14439797 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 gctcgtgcactaccacccgctcgccggccgc 372 |||||| |||||| ||||||||||||||||| Sbjct: 3209027 gctcgtccactactacccgctcgccggccgc 3209057 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggccga 443 ||||||||||||||||| ||||| |||||| |||||||| Sbjct: 12488287 gtggagtgcaccggcgaaggcgtcgtgttcgtcgaggccga 12488327 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 408 gtgcaccggcgagggcgtgccgttcgtggaggc 440 ||||||||||||||||| | |||||||||||| Sbjct: 11514256 gtgcaccggcgagggcgcgtggttcgtggaggc 11514224
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 393 gaagctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||||| |||| || ||||||||||||||||||| |||| | |||||||| |||| Sbjct: 18708031 gaagctcgccgtcgactgcaccggcgagggcgtgctgttcatcgaggccgacgccg 18708086 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 217 tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276 |||||||| |||||||| |||||||||||||| | | ||||||||||| |||| |||| Sbjct: 12996345 tactacctctccaacctcgaccagaacatcgccatcgttgtgcagaccgtctactacttc 12996404 Query: 277 a 277 | Sbjct: 12996405 a 12996405 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 ggcgtgccgttcgtggaggccgag 444 |||||| ||||||||||||||||| Sbjct: 13105938 ggcgtggcgttcgtggaggccgag 13105915 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 1423252 cactactaccctctcgccggccgcctcg 1423279 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 1410352 cactactaccctctcgccggccgcctcg 1410379
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 409 tgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||||||||||||||||| |||||| |||||||| |||| Sbjct: 43657 tgcaccggcgagggcgtgctgttcgtcgaggccgacgccg 43618
>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153350 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 396 gctcaccgtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggc 446 |||| ||||||||||||||||||| || ||| |||||||||||| ||||| Sbjct: 85996 gctcgccgtggagtgcaccggcgaaggggtggtgttcgtggaggcggaggc 85946 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 343 ctcgtgcactaccacccgctcgccggccgcct 374 |||||| ||||| ||||| ||||||||||||| Sbjct: 117918 ctcgtgtactactacccgatcgccggccgcct 117887
>gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030L19, complete sequence Length = 128848 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 506 agctcgtgtactccgttcccggcgccaagaacatcctcgagatgcc 551 ||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 14097 agctcgtgtacagcatccccggcgccaagaacgtcctcgagatgcc 14052
>emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb0034E16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124204 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 506 agctcgtgtactccgttcccggcgccaagaacatcctcgaga 547 ||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 23401 agctcgtgtacaacgtccccggcgccaagaacgtcctcgaga 23360
>ref|NM_183607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 453 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 402 cgtggagtgcaccggcgagggcgtgccgttcgtggaggccg 442 ||||||||||||||||||||||| |||||||||||||| Sbjct: 285 cgtggagtgcaccggcgagggcgcctggttcgtggaggccg 325
>gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1333_C12, complete sequence Length = 102029 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggccga 443 ||||||||||||||||||||||| |||||| |||||||| Sbjct: 70465 gtggagtgcaccggcgagggcgtcgtgttcgtcgaggccga 70505
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 217 tactacctgtccaacctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 276 |||||||| |||||||| |||||||||||||| | | ||||||||||| |||| |||| Sbjct: 87921 tactacctctccaacctcgaccagaacatcgccatcgttgtgcagaccgtctactacttc 87980 Query: 277 a 277 | Sbjct: 87981 a 87981
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 402 cgtggagtgcaccggcgagggcgtgccgttcgtggaggccg 442 ||||||||||||||||||||||| |||||||||||||| Sbjct: 57634 cgtggagtgcaccggcgagggcgcctggttcgtggaggccg 57594
>dbj|AK070443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D03, full insert sequence Length = 1655 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 402 cgtggagtgcaccggcgagggcgtgccgttcgtggaggccg 442 ||||||||||||||||||||||| |||||||||||||| Sbjct: 392 cgtggagtgcaccggcgagggcgcctggttcgtggaggccg 432
>dbj|AK060689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A09, full insert sequence Length = 1553 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 402 cgtggagtgcaccggcgagggcgtgccgttcgtggaggccg 442 ||||||||||||||||||||||| |||||||||||||| Sbjct: 287 cgtggagtgcaccggcgagggcgcctggttcgtggaggccg 327
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 441 cgaggccgcctgcgacctggccctcgtcggcg 472 |||||||||||||||| ||||| ||||||||| Sbjct: 106712 cgaggccgcctgcgacgtggccatcgtcggcg 106681
>ref|NM_185277.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 gctcgtgcactaccacccgctcgccggccgc 372 |||||| |||||| ||||||||||||||||| Sbjct: 210 gctcgtccactactacccgctcgccggccgc 240
>ref|NM_192784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1341 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggcc 441 ||||| |||||||||||||| ||| ||||||||||||| Sbjct: 322 gtggactgcaccggcgagggggtgtggttcgtggaggcc 360
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 gctcgtgcactaccacccgctcgccggccgc 372 |||||| |||||| ||||||||||||||||| Sbjct: 86744 gctcgtccactactacccgctcgccggccgc 86774
>gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, complete sequence Length = 196206 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 caccaatctctctgccatccata 70 ||||||||||||||||||||||| Sbjct: 153587 caccaatctctctgccatccata 153565
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggcc 441 ||||| |||||||||||||| ||| ||||||||||||| Sbjct: 138450 gtggactgcaccggcgagggggtgtggttcgtggaggcc 138412
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 342 gctcgtgcactaccacccgctcgccggccgc 372 |||||| |||||| ||||||||||||||||| Sbjct: 2851 gctcgtccactactacccgctcgccggccgc 2881
>ref|XM_474776.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1326 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 409 tgcaccggcgagggcgtgccgttcgt 434 |||||||||||||||||| ||||||| Sbjct: 283 tgcaccggcgagggcgtggcgttcgt 308
>ref|XM_473108.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||| |||||||||||||| || ||||||| |||||||| |||| Sbjct: 268 gtggactgcaccggcgagggggtctcgttcgtcgaggccgacgccg 313
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||| |||||||||||||| || ||||||| |||||||| |||| Sbjct: 105423 gtggactgcaccggcgagggggtctcgttcgtcgaggccgacgccg 105378
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||| |||||||||||||| || ||||||| |||||||| |||| Sbjct: 48043 gtggactgcaccggcgagggggtctcgttcgtcgaggccgacgccg 47998
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 440 ccgaggccgcctgcgacctggc 461 |||||||||||||||||||||| Sbjct: 6303388 ccgaggccgcctgcgacctggc 6303367 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 gccgcgctgggccagctcgtg 513 ||||||||||||||||||||| Sbjct: 2304339 gccgcgctgggccagctcgtg 2304319
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggccgaggccg 448 ||||| |||||||||||||| || ||||||| |||||||| |||| Sbjct: 25321484 gtggactgcaccggcgagggggtctcgttcgtcgaggccgacgccg 25321439 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 409 tgcaccggcgagggcgtgccgttcgt 434 |||||||||||||||||| ||||||| Sbjct: 6436923 tgcaccggcgagggcgtggcgttcgt 6436948
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 ccgaggccgcctgcgacctggc 461 |||||||||||||||||||||| Sbjct: 603809 ccgaggccgcctgcgacctggc 603830
>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence Length = 147548 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 409 tgcaccggcgagggcgtgccgttcgt 434 |||||||||||||||||| ||||||| Sbjct: 99072 tgcaccggcgagggcgtggcgttcgt 99097
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 306 cgccgcggacgcgctgcgggccgcgctggc 335 ||||||||||||| | |||||||||||||| Sbjct: 41059 cgccgcggacgcggtacgggccgcgctggc 41088
>ref|XM_475094.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1395 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggccga 443 ||||||||||||||||| ||||| |||||| |||||||| Sbjct: 283 gtggagtgcaccggcgaaggcgtcgtgttcgtcgaggccga 323
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 gccgcgctgggccagctcgtg 513 ||||||||||||||||||||| Sbjct: 2173173 gccgcgctgggccagctcgtg 2173153
>gb|AC136229.3| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0690B12, complete sequence Length = 135323 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 408 gtgcaccggcgagggcgtgccgttcgtggaggc 440 ||||||||||||||||| | |||||||||||| Sbjct: 83750 gtgcaccggcgagggcgcgtggttcgtggaggc 83718
>ref|XM_429431.1| PREDICTED: Gallus gallus LOC416444 (LOC416444), mRNA Length = 872 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 acgcgctgcgggccgcgctgg 334 ||||||||||||||||||||| Sbjct: 162 acgcgctgcgggccgcgctgg 182
>gb|AC135428.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0628H02, complete sequence Length = 65115 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 403 gtggagtgcaccggcgagggcgtgccgttcgtggaggccga 443 ||||||||||||||||| ||||| |||||| |||||||| Sbjct: 21825 gtggagtgcaccggcgaaggcgtcgtgttcgtcgaggccga 21865
>gb|AF500200.1| Clarkia breweri benzoyl coenzyme A: benzyl alcohol benzoyl transferase mRNA, complete cds Length = 1374 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 393 gaagctcaccgtggagtgcaccggcgagggcgt 425 ||||||| |||||||||||||||||| ||||| Sbjct: 273 gaagctcgtcgtggagtgcaccggcgaaggcgt 305
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 362 tcgccggccgcctcggcatcagccc 386 ||||||| ||||||||||||||||| Sbjct: 88307 tcgccggtcgcctcggcatcagccc 88283
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 304 cgcgccgcggacgcgctgcgggccg 328 |||||||||| |||||||||||||| Sbjct: 156662 cgcgccgcggccgcgctgcgggccg 156686 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gacgcgctgcgggccgcgct 332 |||||||||||||||||||| Sbjct: 3071122 gacgcgctgcgggccgcgct 3071141 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 accacccgctcgccggccgcctcg 376 ||||||||| |||||||||||||| Sbjct: 619796 accacccgcacgccggccgcctcg 619773
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 307 gccgcggacgcgctgcgggccgcgctggc 335 ||||||| |||||||| |||||||||||| Sbjct: 1121237 gccgcggccgcgctgctggccgcgctggc 1121209
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 411 caccggcgagggcgtgccgtt 431 ||||||||||||||||||||| Sbjct: 4540052 caccggcgagggcgtgccgtt 4540072
>dbj|AK067851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123P12, full insert sequence Length = 1553 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 408 gtgcaccggcgagggcgtgccgttcgtggaggc 440 ||||||||||||||||| | |||||||||||| Sbjct: 406 gtgcaccggcgagggcgcgtggttcgtggaggc 438
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 ccgctcgccggccgcctcggc 378 ||||||||||||||||||||| Sbjct: 1569580 ccgctcgccggccgcctcggc 1569600 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggccgcgctggctcgcgtgc 343 |||||||||||||||||||| Sbjct: 2444209 ggccgcgctggctcgcgtgc 2444190
>emb|CR846080.8| Zebrafish DNA sequence from clone DKEY-29P9 in linkage group 3, complete sequence Length = 242078 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ctcaaagagaccatcaaaatg 93 ||||||||||||||||||||| Sbjct: 103228 ctcaaagagaccatcaaaatg 103208
>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster Length = 64650 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 gacgcgctgcgggccgcgctg 333 ||||||||||||||||||||| Sbjct: 58924 gacgcgctgcgggccgcgctg 58904
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 cgtggaggccgaggccgcctgcga 455 |||| ||||||||||||||||||| Sbjct: 924531 cgtgcaggccgaggccgcctgcga 924508
>ref|NM_194664.1| Oryza sativa (japonica cultivar-group) putative O-deacetylbaccatin III-10-0-acetyltransferase (OSJNBa0049K09.22), mRNA Length = 1269 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 205 cactactaccctctcgccggccgcctcg 232
>ref|NM_194662.1| Oryza sativa (japonica cultivar-group) putative O-deacetylbaccatin III-10-0-acetyltransferase (OSJNBa0049K09.20), mRNA Length = 1266 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 205 cactactaccctctcgccggccgcctcg 232
>ref|XM_465691.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1791 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 333 acccgctcgccggccgcctc 352
>ref|XM_465687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1518 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 263 acccgctcgccggccgcctc 282
>ref|XM_465684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1745 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 322 acccgctcgccggccgcctc 341
>ref|NM_184024.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1368 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 gtgcactaccacccgctcgccggc 369 ||||||||| |||||||||||||| Sbjct: 229 gtgcactactacccgctcgccggc 252
>ref|NM_196396.1| Oryza sativa (japonica cultivar-group) putative anthocyanin 5-aromatic acyltransferase (OSJNBa0044A10.13), mRNA Length = 1371 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 ggcgtgccgttcgtggaggccgag 444 |||||| ||||||||||||||||| Sbjct: 301 ggcgtggcgttcgtggaggccgag 324
>ref|NM_186830.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1739 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 409 tgcaccggcgagggcgtgccgttcgtggaggc 440 |||||||||||||||||| |||||| ||||| Sbjct: 338 tgcaccggcgagggcgtgatgttcgtcgaggc 369
>gb|AC111064.11| Mus musculus chromosome 1, clone RP23-245H20, complete sequence Length = 150336 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tattctttctctctttaaacccac 50 ||||||||||| |||||||||||| Sbjct: 71617 tattctttctcactttaaacccac 71594
>ref|XM_365130.1| Magnaporthe grisea 70-15 hypothetical protein (MG09975.4) partial mRNA Length = 855 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 541 ctcgagatgccgcccatgacggcg 564 |||||||||||||||||| ||||| Sbjct: 667 ctcgagatgccgcccatgccggcg 690
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cggacccggccgcgctgggc 504 |||||||||||||||||||| Sbjct: 2605546 cggacccggccgcgctgggc 2605565
>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216676 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tcctctgtattctttctctc 39 |||||||||||||||||||| Sbjct: 148262 tcctctgtattctttctctc 148243
>gb|AY271660.1| Actinomadura madurae maduropeptin biosynthesis gene cluster, partial sequence Length = 11426 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 ccgcggacgcgctgcgggcc 327 |||||||||||||||||||| Sbjct: 5059 ccgcggacgcgctgcgggcc 5078
>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcaaagagaccatcaaaatg 93 |||||||||||||||||||| Sbjct: 172650 tcaaagagaccatcaaaatg 172669
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 285 gtcgggccgcggcaacgaacgcgccgcg 312 ||||||| ||||||| |||||||||||| Sbjct: 3228901 gtcgggcagcggcaaggaacgcgccgcg 3228874
>emb|AL109940.18|HSJ421D16 Human DNA sequence from clone RP3-421D16 on chromosome 6q26-27 Contains part of the gene for smooth muscle cell associated protein 2 (SMAP2) or secreted modular calcium binding protein 2 (SMOC2) and two CpG islands, complete sequence Length = 110603 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gcagaatggcgtggccacca 127 |||||||||||||||||||| Sbjct: 86451 gcagaatggcgtggccacca 86432
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 1423255 cactactaccctctcgccggccgcctcg 1423282 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 1410355 cactactaccctctcgccggccgcctcg 1410382
>gb|AY897184.1| Uncultured bacterium clone cosT-M40-KS52 modular polyketide synthase gene, partial cds Length = 671 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 tcgccggccgcctcggcatc 381 |||||||||||||||||||| Sbjct: 503 tcgccggccgcctcggcatc 484
>emb|X15540.1|TBPGIG T.brucei pgi gene for glucose-6-phosphate isomerase (EC 5.3.1.9) Length = 2070 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gtattctttctctctttaaa 45 |||||||||||||||||||| Sbjct: 169 gtattctttctctctttaaa 150
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gatgccgcccatgacggcgc 565 |||||||||||||||||||| Sbjct: 308219 gatgccgcccatgacggcgc 308238
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 tcgtggaggccgaggccgcc 450 |||||||||||||||||||| Sbjct: 224941 tcgtggaggccgaggccgcc 224922
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gatgccgcccatgacggcgc 565 |||||||||||||||||||| Sbjct: 72010 gatgccgcccatgacggcgc 72029
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 36009 cactactaccctctcgccggccgcctcg 36036 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 23109 cactactaccctctcgccggccgcctcg 23136
>gb|AC158555.6| Mus musculus chromosome 3, clone RP23-14B10, complete sequence Length = 208510 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ctctgtattctttctctctttaaa 45 |||| ||||||||||||||||||| Sbjct: 118720 ctctatattctttctctctttaaa 118697
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0044A10, from chromosome 10, complete sequence Length = 169270 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 ggcgtgccgttcgtggaggccgag 444 |||||| ||||||||||||||||| Sbjct: 54117 ggcgtggcgttcgtggaggccgag 54094
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gcgccgcggacgcgctgcgggccg 328 ||||||||||||||||||| |||| Sbjct: 4674013 gcgccgcggacgcgctgcgcgccg 4674036
>gb|AC074282.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0049K09, complete sequence Length = 146576 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 122585 cactactaccctctcgccggccgcctcg 122612 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 cactaccacccgctcgccggccgcctcg 376 |||||| |||| |||||||||||||||| Sbjct: 109685 cactactaccctctcgccggccgcctcg 109712
>gb|AC025173.5|AC025173 Homo sapiens chromosome 5 clone CTD-2036C20, complete sequence Length = 140935 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 acttcctctgtattctttct 36 |||||||||||||||||||| Sbjct: 83265 acttcctctgtattctttct 83246
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 409 tgcaccggcgagggcgtgccgttcgtggaggc 440 |||||||||||||||||| |||||| ||||| Sbjct: 8066392 tgcaccggcgagggcgtgatgttcgtcgaggc 8066361
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 16802273 acccgctcgccggccgcctc 16802292 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 16793044 acccgctcgccggccgcctc 16793025 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 16779493 acccgctcgccggccgcctc 16779474 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 506 agctcgtgtactccgttcccggcgccaagaac 537 ||||||||||| ||| ||||||||||||||| Sbjct: 11874220 agctcgtgtacagcgtccccggcgccaagaac 11874251
>gb|AE004605.1| Pseudomonas aeruginosa PAO1, section 166 of 529 of the complete genome Length = 10949 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 aggccgcctgcgacctggccctcg 466 |||||||| ||||||||||||||| Sbjct: 831 aggccgcccgcgacctggccctcg 808
>ref|XM_223660.3| PREDICTED: Rattus norvegicus hypothetical LOC305552 (predicted) (LOC305552), mRNA Length = 2814 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 atgaagctcaccgtggagtg 410 |||||||||||||||||||| Sbjct: 1017 atgaagctcaccgtggagtg 1036
>gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana BAC F17F8 from chromosome I, complete sequence Length = 102393 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tctctgccatccatactctc 75 |||||||||||||||||||| Sbjct: 14929 tctctgccatccatactctc 14948
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 gtgcactaccacccgctcgccggc 369 ||||||||| |||||||||||||| Sbjct: 100949 gtgcactactacccgctcgccggc 100972
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 gtgcactaccacccgctcgccggc 369 ||||||||| |||||||||||||| Sbjct: 16392 gtgcactactacccgctcgccggc 16415
>emb|BX649357.5| Mouse DNA sequence from clone RP23-364J19 on chromosome 2, complete sequence Length = 41488 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccacttcctctgtattcttt 34 |||||||||||||||||||| Sbjct: 26380 ccacttcctctgtattcttt 26361
>dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036H07 Length = 149797 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 3330 acccgctcgccggccgcctc 3349
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 409 tgcaccggcgagggcgtgccgttcgtggaggc 440 |||||||||||||||||| |||||| ||||| Sbjct: 104589 tgcaccggcgagggcgtgatgttcgtcgaggc 104558
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_C08 Length = 117923 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 409 tgcaccggcgagggcgtgccgttcgtggaggc 440 |||||||||||||||||| |||||| ||||| Sbjct: 164 tgcaccggcgagggcgtgatgttcgtcgaggc 133
>dbj|AP005009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572A04 Length = 132018 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 506 agctcgtgtactccgttcccggcgccaagaac 537 ||||||||||| ||| ||||||||||||||| Sbjct: 71993 agctcgtgtacagcgtccccggcgccaagaac 72024
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 156548 acccgctcgccggccgcctc 156529
>dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1122_H01 Length = 103030 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 50515 acccgctcgccggccgcctc 50534 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 41286 acccgctcgccggccgcctc 41267 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 27735 acccgctcgccggccgcctc 27716
>dbj|AK109746.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-F02, full insert sequence Length = 1739 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 409 tgcaccggcgagggcgtgccgttcgtggaggc 440 |||||||||||||||||| |||||| ||||| Sbjct: 338 tgcaccggcgagggcgtgatgttcgtcgaggc 369
>dbj|AK103832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148A21, full insert sequence Length = 1790 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 332 acccgctcgccggccgcctc 351
>dbj|AK103708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136O19, full insert sequence Length = 1745 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 acccgctcgccggccgcctc 375 |||||||||||||||||||| Sbjct: 322 acccgctcgccggccgcctc 341
>dbj|AK071594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102H06, full insert sequence Length = 1713 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 gtgcactaccacccgctcgccggc 369 ||||||||| |||||||||||||| Sbjct: 256 gtgcactactacccgctcgccggc 279
>dbj|AK065433.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013024J06, full insert sequence Length = 1827 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 343 ctcgtgcactaccacccgctcgccggccgcct 374 |||||| ||||| ||||| ||||||||||||| Sbjct: 337 ctcgtgtactactacccgatcgccggccgcct 368
>gb|AF108814.1|AF108814 Petromyzon marinus homeobox protein SIX4 (Six4) mRNA, partial cds Length = 191 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 agaccgtgtactgcttcaag 279 |||||||||||||||||||| Sbjct: 38 agaccgtgtactgcttcaag 57
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 cggccgcgctgggccagctc 510 |||||||||||||||||||| Sbjct: 5488974 cggccgcgctgggccagctc 5488955
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gacgcgctgcgggccgcgct 332 |||||||||||||||||||| Sbjct: 1460343 gacgcgctgcgggccgcgct 1460362
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 294 cggcaacgaacgcgccgcggacgcgctgcggg 325 |||| |||||||||||| | |||||||||||| Sbjct: 1104418 cggcgacgaacgcgccgtgcacgcgctgcggg 1104449
>emb|CR854964.10| Zebrafish DNA sequence from clone DKEY-58J19 in linkage group 1, complete sequence Length = 180969 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 taaggcgcagctgatgtcgg 157 |||||||||||||||||||| Sbjct: 172749 taaggcgcagctgatgtcgg 172768
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 cccggacccggccgcgctgg 502 |||||||||||||||||||| Sbjct: 539792 cccggacccggccgcgctgg 539773
>gb|AC159709.8| Mus musculus 10 BAC RP23-136O17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202716 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tcctctgtattctttctctc 39 |||||||||||||||||||| Sbjct: 56792 tcctctgtattctttctctc 56773 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,312,220 Number of Sequences: 3902068 Number of extensions: 4312220 Number of successful extensions: 107933 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104257 Number of HSP's gapped (non-prelim): 3668 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
