ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13a12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 507 bits (256), Expect = e-140 Identities = 437/494 (88%), Gaps = 5/494 (1%) Strand = Plus / Plus Query: 65 agagcaatggccgcccaggtaccggcgatcgaggttcccactgatgccgagctgctgcag 124 ||||||||||||||||||| ||||| ||| ||||| |||| ||||||||||| | || Sbjct: 29 agagcaatggccgcccaggcaccggtgatggaggtccccaacgatgccgagctcc--caa 86 Query: 125 gctcaggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgctgc 184 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 87 gcacaggccgacctgtggcgccacaccctttactacctcacgtccatggggctccgctgc 146 Query: 185 gccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggtcacctcgctgccc 244 ||||||||||||||||||||||||||||| ||||||||||| || ||| ||||||||||| Sbjct: 147 gccgtcaagctcggcatcccgacggcgatccacaacctcggtggcgtctcctcgctgccc 206 Query: 245 gacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctcggccgcctgatg 304 |||||||| || | ||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 207 gacctggcagctgcgctgtccatcccggcaagcaagcagccgttcctcggccgtcttatg 266 Query: 305 cgcgcgctggtcacctcaggcgtcttcgccgccggcggcaccaacaactccggggcggag 364 |||||||||||||||||||||||||||||| || || | ||| |||| ||||||| Sbjct: 267 cgcgcgctggtcacctcaggcgtcttcgccaacg--ggaaagaacgactcttgggcgga- 323 Query: 365 ctcttccgcctcaacccactctcccgtgtcctggtggatggtgtcgatgcggaagaacac 424 ||||||||||||||||| || ||||| ||||||| || || |||| ||||| || ||| Sbjct: 324 ctcttccgcctcaaccccctgtcccgcatcctggttgagggcgtcgtcgcggaggagcac 383 Query: 425 cacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcgctg 484 |||||||||||||||||||| ||||| ||||| || | ||||||||||||||| |||||| Sbjct: 384 cacagccagacgtccttcgtactcgctgggacttcccggcactacatggaagctgcgctg 443 Query: 485 gggatggccgagtggttcaagaaggacgtcaccgggccggtgccatcggtgttcgaggac 544 |||||||| || |||||||||||||||| ||| || || |||||| |||||||||||||| Sbjct: 444 gggatggctgactggttcaagaaggacgccactggacccgtgccaacggtgttcgaggac 503 Query: 545 gtgcatagcgcgtc 558 ||||| |||||||| Sbjct: 504 gtgcacagcgcgtc 517
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 153 bits (77), Expect = 7e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 107 gatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacg 166 |||||||||||| |||| || |||||||||||||||||||||| |||||||||||||||| Sbjct: 63231 gatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacg 63290 Query: 167 tccatggggctccgctgcgccgtcaagctcggcatcccgac 207 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 63291 tccatgggcctccgctgcgccgtcgagctcggcatcccgac 63331 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 95 gaggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctc 154 |||||||||||||| || ||||||||||| || |||||||| ||||||||||||| |||| Sbjct: 118915 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 118974 Query: 155 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 204 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| Sbjct: 118975 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccc 119024 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Minus Query: 122 caggctcaggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgc 181 ||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 131497 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 131438 Query: 182 tgcgccgtcaagctcggcatccc 204 ||||||||||||||||||||||| Sbjct: 131437 tgcgccgtcaagctcggcatccc 131415 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 422 caccacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcg 481 ||||||||||||||||||||||||||||||| |||||||| ||||||| | || || ||| Sbjct: 119239 caccacagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcg 119298 Query: 482 ctggggatggccgagtggttcaagaaggacgt 513 |||||| ||| ||||||||||| ||||||||| Sbjct: 119299 ctggggctggacgagtggttcaggaaggacgt 119330 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 259 gctgtccatcccggcaagcaagcagccgttcctcggccgcctgatgcgcg 308 ||||||| ||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 119079 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 119128 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccgagtggttcaagaaggac 511 |||||||||||||||||||| Sbjct: 63610 ccgagtggttcaagaaggac 63629
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 153 bits (77), Expect = 7e-34 Identities = 95/101 (94%) Strand = Plus / Minus Query: 107 gatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacg 166 |||||||||||| |||| || |||||||||||||||||||||| |||||||||||||||| Sbjct: 11550557 gatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacg 11550498 Query: 167 tccatggggctccgctgcgccgtcaagctcggcatcccgac 207 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 11550497 tccatgggcctccgctgcgccgtcgagctcggcatcccgac 11550457 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 95 gaggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctc 154 |||||||||||||| || ||||||||||| || |||||||| ||||||||||||| |||| Sbjct: 11494873 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 11494814 Query: 155 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 204 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| Sbjct: 11494813 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccc 11494764 Score = 121 bits (61), Expect = 3e-24 Identities = 97/109 (88%) Strand = Plus / Minus Query: 96 aggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctct 155 |||||||||| || || ||||||||||| || ||||||||||| |||||||||| | ||| Sbjct: 7139018 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 7138959 Query: 156 actacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 204 |||||||||| |||||| |||||||||||||| ||||||||||||||| Sbjct: 7138958 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccc 7138910 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 122 caggctcaggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgc 181 ||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 11482291 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11482350 Query: 182 tgcgccgtcaagctcggcatccc 204 ||||||||||||||||||||||| Sbjct: 11482351 tgcgccgtcaagctcggcatccc 11482373 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 112 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 171 |||||||||||| || |||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 11331656 cgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccat 11331597 Query: 172 ggggctccgctgcgccgtcaagctcggcatccc 204 || | ||| ||||||||||||||||||||||| Sbjct: 11331596 ggcgttccagtgcgccgtcaagctcggcatccc 11331564 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 422 caccacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcg 481 ||||||||||||||||||||||||||||||| |||||||| ||||||| | || || ||| Sbjct: 11494549 caccacagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcg 11494490 Query: 482 ctggggatggccgagtggttcaagaaggacgt 513 |||||| ||| ||||||||||| ||||||||| Sbjct: 11494489 ctggggctggacgagtggttcaggaaggacgt 11494458 Score = 97.6 bits (49), Expect = 4e-17 Identities = 181/225 (80%) Strand = Plus / Minus Query: 112 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 171 |||||||||||| || ||||||||| ||| |||||||| |||||||| | |||||||||| Sbjct: 11355304 cgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccat 11355245 Query: 172 ggggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggt 231 || | | | ||||||||||||||||||||||| || || || ||| | |||||| Sbjct: 11355244 ggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcac 11355185 Query: 232 cacctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcct 291 | |||||||||||||||| | |||| || ||| ||||| | ||||| |||||||| Sbjct: 11355184 cgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcct 11355125 Query: 292 cggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgc 336 | ||||||| ||||| |||||||| ||| |||||||||||||| Sbjct: 11355124 ccgccgcctcatgcggctgctggtcaactcgggcgtcttcgccgc 11355080 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 128 caggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgctgcgcc 187 |||||||| ||||||||||||||||||| ||||||||| |||||| ||||| |||||| Sbjct: 11303032 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 11302973 Query: 188 gtcaagctcggcatcccgacggcgatgcacaacctcggcggggtcacctcgctgcccgac 247 ||| | ||||||||||| || || || ||| || |||||| | | |||||||||||||| Sbjct: 11302972 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 11302913 Query: 248 ct 249 || Sbjct: 11302912 ct 11302911 Score = 61.9 bits (31), Expect = 2e-06 Identities = 184/235 (78%) Strand = Plus / Minus Query: 113 gagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccatg 172 ||||||||||| || |||||||| || |||||||||| ||||| |||| ||||||| || Sbjct: 11439601 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacgtctctg 11439542 Query: 173 gggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggtc 232 | |||| || | | ||||||| |||||||| || || || ||| | |||||| | | Sbjct: 11439541 agtctccaatgtgtcatcaagcttggcatccccaccgccatccaccgcgccggcggcgcc 11439482 Query: 233 acctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctc 292 | |||||||||||||||| ||| |||||| ||||| | ||||| ||||||||| Sbjct: 11439481 gcgtcgctgcccgacctggttaccgctctgtccctcccgccgtccaagctaccgttcctc 11439422 Query: 293 ggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccggcggcacca 347 ||||||| ||||| ||||||| ||| |||||||||||||||| || ||||| Sbjct: 11439421 cgccgcctcatgcggctgctggtccactccggcgtcttcgccgccgacgacacca 11439367 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 259 gctgtccatcccggcaagcaagcagccgttcctcggccgcctgatgcgcg 308 ||||||| ||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 11494709 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 11494660 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cacctcgctgcccgacctggc 252 ||||||||||||||||||||| Sbjct: 15679519 cacctcgctgcccgacctggc 15679539 Score = 42.1 bits (21), Expect = 1.9 Identities = 84/105 (80%) Strand = Plus / Minus Query: 234 cctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctcg 293 |||||||||||||||| | |||| |||||| ||||| | ||||| || |||||| Sbjct: 11331534 cctcgctgcccgaccttgtcgccgccctgtccctcccgcccgccaagctcccattcctcc 11331475 Query: 294 gccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccg 338 ||||||| ||||| ||||||| ||| |||||||||||||||| Sbjct: 11331474 gccgcctcatgcggctgctggtccactcgggcgtcttcgccgccg 11331430 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ccgagtggttcaagaaggac 511 |||||||||||||||||||| Sbjct: 11550178 ccgagtggttcaagaaggac 11550159
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 153 bits (77), Expect = 7e-34 Identities = 95/101 (94%) Strand = Plus / Minus Query: 107 gatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacg 166 |||||||||||| |||| || |||||||||||||||||||||| |||||||||||||||| Sbjct: 11629746 gatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacg 11629687 Query: 167 tccatggggctccgctgcgccgtcaagctcggcatcccgac 207 |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 11629686 tccatgggcctccgctgcgccgtcgagctcggcatcccgac 11629646 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 95 gaggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctc 154 |||||||||||||| || ||||||||||| || |||||||| ||||||||||||| |||| Sbjct: 11574062 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 11574003 Query: 155 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 204 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| Sbjct: 11574002 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccc 11573953 Score = 121 bits (61), Expect = 3e-24 Identities = 97/109 (88%) Strand = Plus / Minus Query: 96 aggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctct 155 |||||||||| || || ||||||||||| || ||||||||||| |||||||||| | ||| Sbjct: 7204989 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 7204930 Query: 156 actacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 204 |||||||||| |||||| |||||||||||||| ||||||||||||||| Sbjct: 7204929 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccc 7204881 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 122 caggctcaggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgc 181 ||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 11561480 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11561539 Query: 182 tgcgccgtcaagctcggcatccc 204 ||||||||||||||||||||||| Sbjct: 11561540 tgcgccgtcaagctcggcatccc 11561562 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 112 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 171 |||||||||||| || |||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 11410845 cgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccat 11410786 Query: 172 ggggctccgctgcgccgtcaagctcggcatccc 204 || | ||| ||||||||||||||||||||||| Sbjct: 11410785 ggcgttccagtgcgccgtcaagctcggcatccc 11410753 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 422 caccacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcg 481 ||||||||||||||||||||||||||||||| |||||||| ||||||| | || || ||| Sbjct: 11573738 caccacagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcg 11573679 Query: 482 ctggggatggccgagtggttcaagaaggacgt 513 |||||| ||| ||||||||||| ||||||||| Sbjct: 11573678 ctggggctggacgagtggttcaggaaggacgt 11573647 Score = 97.6 bits (49), Expect = 4e-17 Identities = 181/225 (80%) Strand = Plus / Minus Query: 112 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 171 |||||||||||| || ||||||||| ||| |||||||| |||||||| | |||||||||| Sbjct: 11434493 cgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccat 11434434 Query: 172 ggggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggt 231 || | | | ||||||||||||||||||||||| || || || ||| | |||||| Sbjct: 11434433 ggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcac 11434374 Query: 232 cacctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcct 291 | |||||||||||||||| | |||| || ||| ||||| | ||||| |||||||| Sbjct: 11434373 cgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcct 11434314 Query: 292 cggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgc 336 | ||||||| ||||| |||||||| ||| |||||||||||||| Sbjct: 11434313 ccgccgcctcatgcggctgctggtcaactcgggcgtcttcgccgc 11434269 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 128 caggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgctgcgcc 187 |||||||| ||||||||||||||||||| ||||||||| |||||| ||||| |||||| Sbjct: 11382221 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 11382162 Query: 188 gtcaagctcggcatcccgacggcgatgcacaacctcggcggggtcacctcgctgcccgac 247 ||| | ||||||||||| || || || ||| || |||||| | | |||||||||||||| Sbjct: 11382161 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 11382102 Query: 248 ct 249 || Sbjct: 11382101 ct 11382100 Score = 61.9 bits (31), Expect = 2e-06 Identities = 184/235 (78%) Strand = Plus / Minus Query: 113 gagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccatg 172 ||||||||||| || |||||||| || |||||||||| ||||| |||| ||||||| || Sbjct: 11518790 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacgtctctg 11518731 Query: 173 gggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggtc 232 | |||| || | | ||||||| |||||||| || || || ||| | |||||| | | Sbjct: 11518730 agtctccaatgtgtcatcaagcttggcatccccaccgccatccaccgcgccggcggcgcc 11518671 Query: 233 acctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctc 292 | |||||||||||||||| ||| |||||| ||||| | ||||| ||||||||| Sbjct: 11518670 gcgtcgctgcccgacctggttaccgctctgtccctcccgccgtccaagctaccgttcctc 11518611 Query: 293 ggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccggcggcacca 347 ||||||| ||||| ||||||| ||| |||||||||||||||| || ||||| Sbjct: 11518610 cgccgcctcatgcggctgctggtccactccggcgtcttcgccgccgacgacacca 11518556 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 259 gctgtccatcccggcaagcaagcagccgttcctcggccgcctgatgcgcg 308 ||||||| ||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 11573898 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 11573849 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cacctcgctgcccgacctggc 252 ||||||||||||||||||||| Sbjct: 15766896 cacctcgctgcccgacctggc 15766916 Score = 42.1 bits (21), Expect = 1.9 Identities = 84/105 (80%) Strand = Plus / Minus Query: 234 cctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctcg 293 |||||||||||||||| | |||| |||||| ||||| | ||||| || |||||| Sbjct: 11410723 cctcgctgcccgaccttgtcgccgccctgtccctcccgcccgccaagctcccattcctcc 11410664 Query: 294 gccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccg 338 ||||||| ||||| ||||||| ||| |||||||||||||||| Sbjct: 11410663 gccgcctcatgcggctgctggtccactcgggcgtcttcgccgccg 11410619 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ccgagtggttcaagaaggac 511 |||||||||||||||||||| Sbjct: 11629367 ccgagtggttcaagaaggac 11629348
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 95 gaggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctc 154 |||||||||||||| || ||||||||||| || |||||||| ||||||||||||| |||| Sbjct: 4664 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 4723 Query: 155 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 204 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| Sbjct: 4724 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccc 4773 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Minus Query: 122 caggctcaggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgc 181 ||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 17246 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 17187 Query: 182 tgcgccgtcaagctcggcatccc 204 ||||||||||||||||||||||| Sbjct: 17186 tgcgccgtcaagctcggcatccc 17164 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 422 caccacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcg 481 ||||||||||||||||||||||||||||||| |||||||| ||||||| | || || ||| Sbjct: 4988 caccacagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcg 5047 Query: 482 ctggggatggccgagtggttcaagaaggacgt 513 |||||| ||| ||||||||||| ||||||||| Sbjct: 5048 ctggggctggacgagtggttcaggaaggacgt 5079 Score = 61.9 bits (31), Expect = 2e-06 Identities = 184/235 (78%) Strand = Plus / Plus Query: 113 gagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccatg 172 ||||||||||| || |||||||| || |||||||||| ||||| |||| ||||||| || Sbjct: 59936 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacgtctctg 59995 Query: 173 gggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggtc 232 | |||| || | | ||||||| |||||||| || || || ||| | |||||| | | Sbjct: 59996 agtctccaatgtgtcatcaagcttggcatccccaccgccatccaccgcgccggcggcgcc 60055 Query: 233 acctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctc 292 | |||||||||||||||| ||| |||||| ||||| | ||||| ||||||||| Sbjct: 60056 gcgtcgctgcccgacctggttaccgctctgtccctcccgccgtccaagctaccgttcctc 60115 Query: 293 ggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccggcggcacca 347 ||||||| ||||| ||||||| ||| |||||||||||||||| || ||||| Sbjct: 60116 cgccgcctcatgcggctgctggtccactccggcgtcttcgccgccgacgacacca 60170 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 259 gctgtccatcccggcaagcaagcagccgttcctcggccgcctgatgcgcg 308 ||||||| ||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 4828 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 4877
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 95 gaggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctc 154 |||||||||||||| || ||||||||||| || |||||||| ||||||||||||| |||| Sbjct: 75 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 134 Query: 155 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 204 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| Sbjct: 135 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccc 184 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 422 caccacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcg 481 ||||||||||||||||||||||||||||||| |||||||| ||||||| | || || ||| Sbjct: 399 caccacagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcg 458 Query: 482 ctggggatggccgagtggttcaagaaggacgt 513 |||||| ||| ||||||||||| ||||||||| Sbjct: 459 ctggggctggacgagtggttcaggaaggacgt 490 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 259 gctgtccatcccggcaagcaagcagccgttcctcggccgcctgatgcgcg 308 ||||||| ||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 239 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 288
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 95 gaggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctc 154 |||||||||||||| || ||||||||||| || |||||||| ||||||||||||| |||| Sbjct: 80 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 139 Query: 155 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 204 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| Sbjct: 140 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccc 189 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 422 caccacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcg 481 ||||||||||||||||||||||||||||||| |||||||| ||||||| | || || ||| Sbjct: 404 caccacagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcg 463 Query: 482 ctggggatggccgagtggttcaagaaggacgt 513 |||||| ||| ||||||||||| ||||||||| Sbjct: 464 ctggggctggacgagtggttcaggaaggacgt 495 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 259 gctgtccatcccggcaagcaagcagccgttcctcggccgcctgatgcgcg 308 ||||||| ||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 244 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 293
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 127 bits (64), Expect = 4e-26 Identities = 193/236 (81%) Strand = Plus / Plus Query: 98 gttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctctac 157 |||||||| || ||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 60 gttcccacggacgccgagctgctgcaggcgcaggccgacctgtggcgccacagcctctac 119 Query: 158 tacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatgcac 217 ||||| || ||||||| |||| ||||| || ||||| ||||||||| || || ||| Sbjct: 120 tacctgacatccatggcgctcaagtgcgcggtggagctccacatcccgaccgccatccac 179 Query: 218 aacctcggcggggtcacctcgctgcccgacctggcggccgtgctgtccatcccggcaagc 277 ||||| |||||| || ||||||| ||||| | ||||| ||||||| | || || | Sbjct: 180 aacctaggcgggtctgccacgctgccggacctcgtggccgcgctgtccctgccagcggcc 239 Query: 278 aagcagccgttcctcggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgc 333 |||| ||||||||||| ||| ||||||| ||||||||| || ||||||||||| Sbjct: 240 aagctcccgttcctcgggcgcgtgatgcggctgctggtcacgtcgggcgtcttcgc 295
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 121 bits (61), Expect = 3e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 96 aggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctct 155 |||||||||| || || ||||||||||| || ||||||||||| |||||||||| | ||| Sbjct: 43537 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 43596 Query: 156 actacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 204 |||||||||| |||||| |||||||||||||| ||||||||||||||| Sbjct: 43597 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccc 43645
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 121 bits (61), Expect = 3e-24 Identities = 97/109 (88%) Strand = Plus / Minus Query: 96 aggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctct 155 |||||||||| || || ||||||||||| || ||||||||||| |||||||||| | ||| Sbjct: 52238 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 52179 Query: 156 actacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 204 |||||||||| |||||| |||||||||||||| ||||||||||||||| Sbjct: 52178 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccc 52130
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 122 caggctcaggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgc 181 ||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 118 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 177 Query: 182 tgcgccgtcaagctcggcatccc 204 ||||||||||||||||||||||| Sbjct: 178 tgcgccgtcaagctcggcatccc 200
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 112 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 171 |||||||||||| || |||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 118014 cgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccat 117955 Query: 172 ggggctccgctgcgccgtcaagctcggcatccc 204 || | ||| ||||||||||||||||||||||| Sbjct: 117954 ggcgttccagtgcgccgtcaagctcggcatccc 117922 Score = 97.6 bits (49), Expect = 4e-17 Identities = 181/225 (80%) Strand = Plus / Minus Query: 112 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 171 |||||||||||| || ||||||||| ||| |||||||| |||||||| | |||||||||| Sbjct: 141662 cgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccat 141603 Query: 172 ggggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggt 231 || | | | ||||||||||||||||||||||| || || || ||| | |||||| Sbjct: 141602 ggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcac 141543 Query: 232 cacctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcct 291 | |||||||||||||||| | |||| || ||| ||||| | ||||| |||||||| Sbjct: 141542 cgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcct 141483 Query: 292 cggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgc 336 | ||||||| ||||| |||||||| ||| |||||||||||||| Sbjct: 141482 ccgccgcctcatgcggctgctggtcaactcgggcgtcttcgccgc 141438 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 128 caggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgctgcgcc 187 |||||||| ||||||||||||||||||| ||||||||| |||||| ||||| |||||| Sbjct: 89390 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 89331 Query: 188 gtcaagctcggcatcccgacggcgatgcacaacctcggcggggtcacctcgctgcccgac 247 ||| | ||||||||||| || || || ||| || |||||| | | |||||||||||||| Sbjct: 89330 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 89271 Query: 248 ct 249 || Sbjct: 89270 ct 89269 Score = 42.1 bits (21), Expect = 1.9 Identities = 84/105 (80%) Strand = Plus / Minus Query: 234 cctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctcg 293 |||||||||||||||| | |||| |||||| ||||| | ||||| || |||||| Sbjct: 117892 cctcgctgcccgaccttgtcgccgccctgtccctcccgcccgccaagctcccattcctcc 117833 Query: 294 gccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccg 338 ||||||| ||||| ||||||| ||| |||||||||||||||| Sbjct: 117832 gccgcctcatgcggctgctggtccactcgggcgtcttcgccgccg 117788
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 112 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 171 |||||||||||| || |||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 91 cgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccat 150 Query: 172 ggggctccgctgcgccgtcaagctcggcatccc 204 || | ||| ||||||||||||||||||||||| Sbjct: 151 ggcgttccagtgcgccgtcaagctcggcatccc 183 Score = 42.1 bits (21), Expect = 1.9 Identities = 84/105 (80%) Strand = Plus / Plus Query: 234 cctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctcg 293 |||||||||||||||| | |||| |||||| ||||| | ||||| || |||||| Sbjct: 213 cctcgctgcccgaccttgtcgccgccctgtccctcccgcccgccaagctcccattcctcc 272 Query: 294 gccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccg 338 ||||||| ||||| ||||||| ||| |||||||||||||||| Sbjct: 273 gccgcctcatgcggctgctggtccactcgggcgtcttcgccgccg 317
>ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 176 ctccgctgcgccgtcaagctcggcatccc 204 ||||||||||||||| ||||||||||||| Sbjct: 100 ctccgctgcgccgtcgagctcggcatccc 128
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 176 ctccgctgcgccgtcaagctcggcatccc 204 ||||||||||||||| ||||||||||||| Sbjct: 31604095 ctccgctgcgccgtcgagctcggcatccc 31604123
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 176 ctccgctgcgccgtcaagctcggcatccc 204 ||||||||||||||| ||||||||||||| Sbjct: 17827 ctccgctgcgccgtcgagctcggcatccc 17855
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 176 ctccgctgcgccgtcaagctcggcatccc 204 ||||||||||||||| ||||||||||||| Sbjct: 117118 ctccgctgcgccgtcgagctcggcatccc 117146
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cggggtcacctcgctgcccgac 247 |||||||||||||||||||||| Sbjct: 151509 cggggtcacctcgctgcccgac 151530
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 gctgcaggctcaggccgacct 138 ||||||||||||||||||||| Sbjct: 911044 gctgcaggctcaggccgacct 911064
>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09, complete sequence Length = 171861 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cacctcgctgcccgacctggc 252 ||||||||||||||||||||| Sbjct: 89200 cacctcgctgcccgacctggc 89220
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 cgacctggcggccgtgctgtc 264 ||||||||||||||||||||| Sbjct: 278847 cgacctggcggccgtgctgtc 278867
>gb|AY701054.2| Streptomyces rimosus rimocidin synthase (rms) gene, partial cds Length = 8939 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cccaggtaccggcgatcgagg 98 ||||||||||||||||||||| Sbjct: 5038 cccaggtaccggcgatcgagg 5018
>ref|XM_478005.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 302 atgcgcgcgctggtcacctcaggcgtcttcgc 333 ||||||| ||||||| |||| ||||||||||| Sbjct: 202 atgcgcgtgctggtcgcctcgggcgtcttcgc 233
>ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 302 atgcgcgcgctggtcacctcaggcgtcttcgc 333 ||||||| ||||||| |||| ||||||||||| Sbjct: 205 atgcgcgtgctggtcgcctcgggcgtcttcgc 236
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 ctgctgcaggctcaggccgacctg 139 ||||| |||||||||||||||||| Sbjct: 843498 ctgctccaggctcaggccgacctg 843475
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 485 gggatggccgagtggttcaagaag 508 ||||||||||||||| |||||||| Sbjct: 657839 gggatggccgagtgggtcaagaag 657862
>ref|XM_755216.1| Ustilago maydis 521 hypothetical protein (UM04162.1) partial mRNA Length = 5145 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 aatatcagccagtgatcgag 58 |||||||||||||||||||| Sbjct: 2072 aatatcagccagtgatcgag 2091
>ref|XM_744633.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g05970) partial mRNA Length = 4257 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 gagtggttcaagaaggacgt 513 |||||||||||||||||||| Sbjct: 32 gagtggttcaagaaggacgt 13
>ref|XM_816099.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510329.150) partial mRNA Length = 1326 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 tgtggcgccacaccctctactacctcacgtcc 169 |||||||| |||||||| ||||||||||||| Sbjct: 1262 tgtggcgcttcaccctctcctacctcacgtcc 1293
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 cgttcctcggccgcctgatgcgcg 308 ||||||| |||||||||||||||| Sbjct: 108241 cgttcctgggccgcctgatgcgcg 108264
>gb|AE005746.1| Caulobacter crescentus CB15 section 72 of 359 of the complete genome Length = 10948 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tcacctcgctgcccgacctg 250 |||||||||||||||||||| Sbjct: 2245 tcacctcgctgcccgacctg 2226
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 302 atgcgcgcgctggtcacctcaggcgtcttcgc 333 ||||||| ||||||| |||| ||||||||||| Sbjct: 16295699 atgcgcgtgctggtcgcctcgggcgtcttcgc 16295668 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 302 atgcgcgcgctggtcacctcaggcgtcttcgc 333 ||||||| ||||||| |||| ||||||||||| Sbjct: 16265053 atgcgcgtgctggtcgcctcgggcgtcttcgc 16265022 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 302 atgcgcgcgctggtcacctcaggcgtcttcgc 333 ||||||| ||||||| |||| ||||||||||| Sbjct: 16219664 atgcgcgtgctggtcgcctcgggcgtcttcgc 16219695
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ggcgtcttcgccgccggcgg 342 |||||||||||||||||||| Sbjct: 3091215 ggcgtcttcgccgccggcgg 3091196
>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0473C09 Length = 141066 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 302 atgcgcgcgctggtcacctcaggcgtcttcgc 333 ||||||| ||||||| |||| ||||||||||| Sbjct: 1755 atgcgcgtgctggtcgcctcgggcgtcttcgc 1724
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_H04 Length = 151699 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 302 atgcgcgcgctggtcacctcaggcgtcttcgc 333 ||||||| ||||||| |||| ||||||||||| Sbjct: 116137 atgcgcgtgctggtcgcctcgggcgtcttcgc 116106 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 302 atgcgcgcgctggtcacctcaggcgtcttcgc 333 ||||||| ||||||| |||| ||||||||||| Sbjct: 85491 atgcgcgtgctggtcgcctcgggcgtcttcgc 85460 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 302 atgcgcgcgctggtcacctcaggcgtcttcgc 333 ||||||| ||||||| |||| ||||||||||| Sbjct: 40102 atgcgcgtgctggtcgcctcgggcgtcttcgc 40133
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcagccgttcctcggccgcc 299 |||||||||||||||||||| Sbjct: 3087139 gcagccgttcctcggccgcc 3087158 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,363,214 Number of Sequences: 3902068 Number of extensions: 3363214 Number of successful extensions: 67911 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66890 Number of HSP's gapped (non-prelim): 1012 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
