ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13a05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 617 bits (311), Expect = e-173 Identities = 483/539 (89%), Gaps = 6/539 (1%) Strand = Plus / Minus Query: 51 cctcctcctgctcgccgtgctgctccgggcg---gcggccacggccgacccggacgcagt 107 ||||||| |||||||||||||||| | |||| ||||| | || ||| || ||||| || Sbjct: 19617851 cctcctcttgctcgccgtgctgctgccggcgatggcggcaaggggcgatcccgacgcggt 19617792 Query: 108 gcaggacttctgcgtgccggacgccggacgc---cggccggtggagctgaacctgatccg 164 ||||||||||||||||||||||||||| || |||||||||||||| | || ||| Sbjct: 19617791 gcaggacttctgcgtgccggacgccgggcgtgggcggccggtggagctcgccatgctccc 19617732 Query: 165 ctcctacccgtgcaggagcccgggcaacgtcaccgcgggcgacttcgtcttctccggcgt 224 ||||||||||||||||||| | |||| | || ||||||||||||| |||||||||||| Sbjct: 19617731 ggcctacccgtgcaggagccccgccaacctgacggcgggcgacttcgccttctccggcgt 19617672 Query: 225 gcgcgcggcgggcaacttctcggcggacacggggttcgcgggggtgtcggtcacgccggc 284 |||||| ||||| ||||||||| |||| ||||||||||| || ||||| ||||| ||||| Sbjct: 19617671 gcgcgccgcggggaacttctcgccggagacggggttcgccggcgtgtccgtcaccccggc 19617612 Query: 285 gcagttcccggggctgcacaccctgggcatgtccttcgcccgcgccgacctctctgcggc 344 |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 19617611 gcagttcccgggcctgcacaccctggggatgtccttcgcccgcgccgacctctcggcggc 19617552 Query: 345 cggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctcgc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19617551 cggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctcgc 19617492 Query: 405 cggccgcgtctacgccgggttcgtcgacacggccggccgcctcttcgccaaggtgctcgt 464 ||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||| Sbjct: 19617491 cggccgcgtgtacgccgggttcgtcgactccggcggccgcctcttcgccaaggtgctcga 19617432 Query: 465 ggagggggaggtcatggtgttcccccgcggcatggtgcacttccagctcaacgtcggcga 524 | |||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 19617431 gcagggggaggtgatggtgttcccgcgcgccatggtgcacttccagctcaacgtcggcga 19617372 Query: 525 ccagccggccaccgtctacggcaccttcaacagcgagaaccccggcatcgtgcgcatcc 583 | ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 19617371 cacgccggccacggtctacggcgccttcaacagcgagaaccccggcatcgtccgcatcc 19617313
>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0605D08 Length = 144340 Score = 617 bits (311), Expect = e-173 Identities = 483/539 (89%), Gaps = 6/539 (1%) Strand = Plus / Minus Query: 51 cctcctcctgctcgccgtgctgctccgggcg---gcggccacggccgacccggacgcagt 107 ||||||| |||||||||||||||| | |||| ||||| | || ||| || ||||| || Sbjct: 84137 cctcctcttgctcgccgtgctgctgccggcgatggcggcaaggggcgatcccgacgcggt 84078 Query: 108 gcaggacttctgcgtgccggacgccggacgc---cggccggtggagctgaacctgatccg 164 ||||||||||||||||||||||||||| || |||||||||||||| | || ||| Sbjct: 84077 gcaggacttctgcgtgccggacgccgggcgtgggcggccggtggagctcgccatgctccc 84018 Query: 165 ctcctacccgtgcaggagcccgggcaacgtcaccgcgggcgacttcgtcttctccggcgt 224 ||||||||||||||||||| | |||| | || ||||||||||||| |||||||||||| Sbjct: 84017 ggcctacccgtgcaggagccccgccaacctgacggcgggcgacttcgccttctccggcgt 83958 Query: 225 gcgcgcggcgggcaacttctcggcggacacggggttcgcgggggtgtcggtcacgccggc 284 |||||| ||||| ||||||||| |||| ||||||||||| || ||||| ||||| ||||| Sbjct: 83957 gcgcgccgcggggaacttctcgccggagacggggttcgccggcgtgtccgtcaccccggc 83898 Query: 285 gcagttcccggggctgcacaccctgggcatgtccttcgcccgcgccgacctctctgcggc 344 |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 83897 gcagttcccgggcctgcacaccctggggatgtccttcgcccgcgccgacctctcggcggc 83838 Query: 345 cggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctcgc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83837 cggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctcgc 83778 Query: 405 cggccgcgtctacgccgggttcgtcgacacggccggccgcctcttcgccaaggtgctcgt 464 ||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||| Sbjct: 83777 cggccgcgtgtacgccgggttcgtcgactccggcggccgcctcttcgccaaggtgctcga 83718 Query: 465 ggagggggaggtcatggtgttcccccgcggcatggtgcacttccagctcaacgtcggcga 524 | |||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 83717 gcagggggaggtgatggtgttcccgcgcgccatggtgcacttccagctcaacgtcggcga 83658 Query: 525 ccagccggccaccgtctacggcaccttcaacagcgagaaccccggcatcgtgcgcatcc 583 | ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 83657 cacgccggccacggtctacggcgccttcaacagcgagaaccccggcatcgtccgcatcc 83599
>dbj|AK059817.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C02, full insert sequence Length = 997 Score = 617 bits (311), Expect = e-173 Identities = 483/539 (89%), Gaps = 6/539 (1%) Strand = Plus / Plus Query: 51 cctcctcctgctcgccgtgctgctccgggcg---gcggccacggccgacccggacgcagt 107 ||||||| |||||||||||||||| | |||| ||||| | || ||| || ||||| || Sbjct: 90 cctcctcttgctcgccgtgctgctgccggcgatggcggcaaggggcgatcccgacgcggt 149 Query: 108 gcaggacttctgcgtgccggacgccggacgc---cggccggtggagctgaacctgatccg 164 ||||||||||||||||||||||||||| || |||||||||||||| | || ||| Sbjct: 150 gcaggacttctgcgtgccggacgccgggcgtgggcggccggtggagctcgccatgctccc 209 Query: 165 ctcctacccgtgcaggagcccgggcaacgtcaccgcgggcgacttcgtcttctccggcgt 224 ||||||||||||||||||| | |||| | || ||||||||||||| |||||||||||| Sbjct: 210 ggcctacccgtgcaggagccccgccaacctgacggcgggcgacttcgccttctccggcgt 269 Query: 225 gcgcgcggcgggcaacttctcggcggacacggggttcgcgggggtgtcggtcacgccggc 284 |||||| ||||| ||||||||| |||| ||||||||||| || ||||| ||||| ||||| Sbjct: 270 gcgcgccgcggggaacttctcgccggagacggggttcgccggcgtgtccgtcaccccggc 329 Query: 285 gcagttcccggggctgcacaccctgggcatgtccttcgcccgcgccgacctctctgcggc 344 |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 330 gcagttcccgggcctgcacaccctggggatgtccttcgcccgcgccgacctctcggcggc 389 Query: 345 cggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctcgc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 cggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctcgc 449 Query: 405 cggccgcgtctacgccgggttcgtcgacacggccggccgcctcttcgccaaggtgctcgt 464 ||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||| Sbjct: 450 cggccgcgtgtacgccgggttcgtcgactccggcggccgcctcttcgccaaggtgctcga 509 Query: 465 ggagggggaggtcatggtgttcccccgcggcatggtgcacttccagctcaacgtcggcga 524 | |||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 510 gcagggggaggtgatggtgttcccgcgcgccatggtgcacttccagctcaacgtcggcga 569 Query: 525 ccagccggccaccgtctacggcaccttcaacagcgagaaccccggcatcgtgcgcatcc 583 | ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 570 cacgccggccacggtctacggcgccttcaacagcgagaaccccggcatcgtccgcatcc 628
>ref|NM_189765.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 708 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 346 ggcggcgtcaacccgccgcactaccacccgcgcgccaccgaga 388 ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 340 ggcggcgccaacccgccgcactcccacccgcgcgccaccgaga 382
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 346 ggcggcgtcaacccgccgcactaccacccgcgcgccaccgaga 388 ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 41910850 ggcggcgccaacccgccgcactcccacccgcgcgccaccgaga 41910892 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 8203445 ccggcggcctcaacccgccgcacacccacccgcgcgccaccgag 8203402 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgcc 381 |||||||| ||||||||||||||| |||||||||||| Sbjct: 29225479 ccggcggcctcaacccgccgcactcgcacccgcgcgcc 29225516 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 487 ccccgcggcatggtgcacttccagctcaacgtcggcg 523 ||||||||| || ||||||||||||||||||||||| Sbjct: 29225622 ccccgcggcctgcagcacttccagctcaacgtcggcg 29225658 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 355 aacccgccgcactaccacccgcgcgccaccgaga 388 |||||||||||| ||||||||||||||||||| Sbjct: 10166560 aacccgccgcacacgcacccgcgcgccaccgaga 10166527
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 346 ggcggcgtcaacccgccgcactaccacccgcgcgccaccgaga 388 ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 12927 ggcggcgccaacccgccgcactcccacccgcgcgccaccgaga 12969
>ref|XM_476264.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcct 401 |||||||| |||||||||||||| |||||||||||||||||||| || | ||||||| Sbjct: 308 ccggcggcctcaacccgccgcacacccacccgcgcgccaccgagatggtgttcgtcct 365
>ref|XM_470004.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/100 (84%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 288 gttcccggggctgcacaccctgggcatgtccttcgcccgcgccgacctctctgcggccgg 347 ||||||||||||| |||| || ||| | ||| ||| ||||| |||||| ||| |||| Sbjct: 282 gttcccggggctgaacacgctcggcgtctccatcggccgcgtcgacct---tgcccccgg 338 Query: 348 cggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||| |||| ||||||||||||||||||| Sbjct: 339 cggcgtcaacccgctgcacagccacccgcgcgccaccgag 378
>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0055E23, complete sequence Length = 156572 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcct 401 |||||||| |||||||||||||| |||||||||||||||||||| || | ||||||| Sbjct: 92490 ccggcggcctcaacccgccgcacacccacccgcgcgccaccgagatggtgttcgtcct 92547
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/100 (84%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 288 gttcccggggctgcacaccctgggcatgtccttcgcccgcgccgacctctctgcggccgg 347 ||||||||||||| |||| || ||| | ||| ||| ||||| |||||| ||| |||| Sbjct: 33287552 gttcccggggctgaacacgctcggcgtctccatcggccgcgtcgacct---tgcccccgg 33287608 Query: 348 cggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||| |||| ||||||||||||||||||| Sbjct: 33287609 cggcgtcaacccgctgcacagccacccgcgcgccaccgag 33287648 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||||||| |||| ||||||||||||| ||||| Sbjct: 33282902 ccggcggcgtcaacccgctgcacagccacccgcgcgccgccgag 33282945 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 27488292 ccggcggcaccaacccgccgcacgtccacccgcgcgccaccgag 27488249 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 354 caacccgccgcactaccacccgcgcgccaccgag 387 ||||||||||||| ||||||||||||||||||| Sbjct: 27500206 caacccgccgcacgtccacccgcgcgccaccgag 27500173 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 354 caacccgccgcactaccacccgcgcgccaccgag 387 ||||||||||||| ||||||||||||||||||| Sbjct: 27497225 caacccgccgcacgtccacccgcgcgccaccgag 27497192 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 358 ccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctc 402 |||||||||| |||||||||||| | ||| |||||||||||||| Sbjct: 4139684 ccgccgcactcccacccgcgcgcgtcggaggcggcgctcgtcctc 4139728 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||||||||| Sbjct: 27500003 ccttcaacagccagaaccccggcatcgt 27499976 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||||||||| Sbjct: 27497022 ccttcaacagccagaaccccggcatcgt 27496995 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccac 383 |||||||| ||||||||||||| ||||||||||||||| Sbjct: 27492896 ccggcggcaccaacccgccgcacgtccacccgcgcgccac 27492857 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 357 cccgccgcactaccacccgcgcgccaccgaga 388 |||||||||| |||||||||||||||||||| Sbjct: 25030319 cccgccgcacacccacccgcgcgccaccgaga 25030350 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| ||||||| |||||||| Sbjct: 27488079 ccttcaacagccagaaccctggcatcgt 27488052
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/100 (84%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 288 gttcccggggctgcacaccctgggcatgtccttcgcccgcgccgacctctctgcggccgg 347 ||||||||||||| |||| || ||| | ||| ||| ||||| |||||| ||| |||| Sbjct: 44068 gttcccggggctgaacacgctcggcgtctccatcggccgcgtcgacct---tgcccccgg 44124 Query: 348 cggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||| |||| ||||||||||||||||||| Sbjct: 44125 cggcgtcaacccgctgcacagccacccgcgcgccaccgag 44164 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||||||| |||| ||||||||||||| ||||| Sbjct: 39418 ccggcggcgtcaacccgctgcacagccacccgcgcgccgccgag 39461
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcct 401 |||||||| |||||||||||||| |||||||||||||||||||| || | ||||||| Sbjct: 11367213 ccggcggcctcaacccgccgcacacccacccgcgcgccaccgagatggtgttcgtcct 11367270 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctcg 403 |||||||||| ||||||||||||||||||| | || | ||||||||| | || |||| Sbjct: 5904580 ccggcggcgttttcccgccgcactaccacccgagggcgtcggagacggcggtggtgctcg 5904639 Query: 404 ccggccgcgtctac 417 ||||| ||||||| Sbjct: 5904640 ccggcgccgtctac 5904653 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 66 cgtgctgctccgggcggcggccacggccg 94 |||||||| ||||||||||||||| |||| Sbjct: 14685033 cgtgctgccccgggcggcggccaccgccg 14685061 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 5411341 cgccggccgcgtctacgccg 5411322
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/100 (84%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 288 gttcccggggctgcacaccctgggcatgtccttcgcccgcgccgacctctctgcggccgg 347 ||||||||||||| |||| || ||| | ||| ||| ||||| |||||| ||| |||| Sbjct: 33378062 gttcccggggctgaacacgctcggcgtctccatcggccgcgtcgacct---tgcccccgg 33378118 Query: 348 cggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||| |||| ||||||||||||||||||| Sbjct: 33378119 cggcgtcaacccgctgcacagccacccgcgcgccaccgag 33378158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||||||| |||| ||||||||||||| ||||| Sbjct: 33373412 ccggcggcgtcaacccgctgcacagccacccgcgcgccgccgag 33373455 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 27579615 ccggcggcaccaacccgccgcacgtccacccgcgcgccaccgag 27579572 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 354 caacccgccgcactaccacccgcgcgccaccgag 387 ||||||||||||| ||||||||||||||||||| Sbjct: 27591529 caacccgccgcacgtccacccgcgcgccaccgag 27591496 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 354 caacccgccgcactaccacccgcgcgccaccgag 387 ||||||||||||| ||||||||||||||||||| Sbjct: 27588548 caacccgccgcacgtccacccgcgcgccaccgag 27588515 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 358 ccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctc 402 |||||||||| |||||||||||| | ||| |||||||||||||| Sbjct: 4139793 ccgccgcactcccacccgcgcgcgtcggaggcggcgctcgtcctc 4139837 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||||||||| Sbjct: 27591326 ccttcaacagccagaaccccggcatcgt 27591299 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||||||||| Sbjct: 27588345 ccttcaacagccagaaccccggcatcgt 27588318 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccac 383 |||||||| ||||||||||||| ||||||||||||||| Sbjct: 27584219 ccggcggcaccaacccgccgcacgtccacccgcgcgccac 27584180 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 357 cccgccgcactaccacccgcgcgccaccgaga 388 |||||||||| |||||||||||||||||||| Sbjct: 25121636 cccgccgcacacccacccgcgcgccaccgaga 25121667 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| ||||||| |||||||| Sbjct: 27579402 ccttcaacagccagaaccctggcatcgt 27579375
>dbj|AK105351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A07, full insert sequence Length = 840 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcct 401 |||||||| |||||||||||||| |||||||||||||||||||| || | ||||||| Sbjct: 337 ccggcggcctcaacccgccgcacacccacccgcgcgccaccgagatggtgttcgtcct 394
>ref|NM_188793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 684 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 326 ccggcggcctcaacccgccgcacacccacccgcgcgccaccgag 369
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 167566 ccggcggcctcaacccgccgcacacccacccgcgcgccaccgag 167523
>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C11 Length = 139399 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 121163 ccggcggcctcaacccgccgcacacccacccgcgcgccaccgag 121120
>dbj|AK061046.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E11, full insert sequence Length = 1039 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 426 ccggcggcctcaacccgccgcacacccacccgcgcgccaccgag 469
>ref|XM_470001.1| Oryza sativa (japonica cultivar-group), mRNA Length = 856 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||||||| |||| ||||||||||||| ||||| Sbjct: 362 ccggcggcgtcaacccgctgcacagccacccgcgcgccgccgag 405
>ref|XM_469349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 320 ccggcggcaccaacccgccgcacgtccacccgcgcgccaccgag 363 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| ||||||| |||||||| Sbjct: 533 ccttcaacagccagaaccctggcatcgt 560
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 62222 ccggcggcaccaacccgccgcacgtccacccgcgcgccaccgag 62265 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 354 caacccgccgcactaccacccgcgcgccaccgag 387 ||||||||||||| ||||||||||||||||||| Sbjct: 53289 caacccgccgcacgtccacccgcgcgccaccgag 53322 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 354 caacccgccgcactaccacccgcgcgccaccgag 387 ||||||||||||| ||||||||||||||||||| Sbjct: 50308 caacccgccgcacgtccacccgcgcgccaccgag 50341 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccac 383 |||||||| ||||||||||||| ||||||||||||||| Sbjct: 57618 ccggcggcaccaacccgccgcacgtccacccgcgcgccac 57657 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||||||||| Sbjct: 53492 ccttcaacagccagaaccccggcatcgt 53519 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||||||||| Sbjct: 50511 ccttcaacagccagaaccccggcatcgt 50538 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| ||||||| |||||||| Sbjct: 62435 ccttcaacagccagaaccctggcatcgt 62462
>dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137P21, full insert sequence Length = 998 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 446 ccggcggcaccaacccgccgcacgtccacccgcgcgccaccgag 489 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| ||||||| |||||||| Sbjct: 659 ccttcaacagccagaaccctggcatcgt 686
>dbj|AK062698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-A11, full insert sequence Length = 856 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||||||| |||| ||||||||||||| ||||| Sbjct: 362 ccggcggcgtcaacccgctgcacagccacccgcgcgccgccgag 405
>gb|AF072694.1|AF072694 Oryza sativa germin-like protein 7 (GER7) mRNA, complete cds Length = 856 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||||||| |||| ||||||||||||| ||||| Sbjct: 347 ccggcggcgtcaacccgctgcacagccacccgcgcgccgccgag 390
>ref|NM_191639.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 675 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgcc 381 |||||||| ||||||||||||||| |||||||||||| Sbjct: 323 ccggcggcctcaacccgccgcactcgcacccgcgcgcc 360 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 487 ccccgcggcatggtgcacttccagctcaacgtcggcg 523 ||||||||| || ||||||||||||||||||||||| Sbjct: 466 ccccgcggcctgcagcacttccagctcaacgtcggcg 502
>ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 354 caacccgccgcactaccacccgcgcgccaccgag 387 ||||||||||||| ||||||||||||||||||| Sbjct: 472 caacccgccgcacgtccacccgcgcgccaccgag 505 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||||||||| Sbjct: 675 ccttcaacagccagaaccccggcatcgt 702
>ref|XM_469351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 354 caacccgccgcactaccacccgcgcgccaccgag 387 ||||||||||||| ||||||||||||||||||| Sbjct: 330 caacccgccgcacgtccacccgcgcgccaccgag 363 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||||||||| Sbjct: 533 ccttcaacagccagaaccccggcatcgt 560
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgcc 381 |||||||| ||||||||||||||| |||||||||||| Sbjct: 4342 ccggcggcctcaacccgccgcactcgcacccgcgcgcc 4379 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 487 ccccgcggcatggtgcacttccagctcaacgtcggcg 523 ||||||||| || ||||||||||||||||||||||| Sbjct: 4485 ccccgcggcctgcagcacttccagctcaacgtcggcg 4521
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgcc 381 |||||||| ||||||||||||||| |||||||||||| Sbjct: 71266 ccggcggcctcaacccgccgcactcgcacccgcgcgcc 71303 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 487 ccccgcggcatggtgcacttccagctcaacgtcggcg 523 ||||||||| || ||||||||||||||||||||||| Sbjct: 71409 ccccgcggcctgcagcacttccagctcaacgtcggcg 71445
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full insert sequence Length = 1028 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 354 caacccgccgcactaccacccgcgcgccaccgag 387 ||||||||||||| ||||||||||||||||||| Sbjct: 483 caacccgccgcacgtccacccgcgcgccaccgag 516 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||||||||| Sbjct: 686 ccttcaacagccagaaccccggcatcgt 713
>ref|XM_470530.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 678 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 358 ccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctc 402 |||||||||| |||||||||||| | ||| |||||||||||||| Sbjct: 337 ccgccgcactcccacccgcgcgcgtcggaggcggcgctcgtcctc 381
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 358 ccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctc 402 |||||||||| |||||||||||| | ||| |||||||||||||| Sbjct: 40321 ccgccgcactcccacccgcgcgcgtcggaggcggcgctcgtcctc 40365
>ref|XM_469032.1| Oryza sativa (japonica cultivar-group), mRNA Length = 996 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 357 cccgccgcactaccacccgcgcgccaccgaga 388 |||||||||| |||||||||||||||||||| Sbjct: 327 cccgccgcacacccacccgcgcgccaccgaga 358
>ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccac 383 |||||||| ||||||||||||| ||||||||||||||| Sbjct: 326 ccggcggcaccaacccgccgcacgtccacccgcgcgccac 365
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 357 cccgccgcactaccacccgcgcgccaccgaga 388 |||||||||| |||||||||||||||||||| Sbjct: 146764 cccgccgcacacccacccgcgcgccaccgaga 146795
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 357 cccgccgcactaccacccgcgcgccaccgaga 388 |||||||||| |||||||||||||||||||| Sbjct: 62126 cccgccgcacacccacccgcgcgccaccgaga 62157
>emb|Y09916.1|TAPSBGER2 T.aestivum mRNA for germin-like protein 2, partial Length = 764 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||||||||| Sbjct: 355 ccttcaacagccagaaccccggcatcgt 382
>gb|AY098510.1| Ananas comosus germin-like protein mRNA, complete cds Length = 783 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||| ||||||||| ||| ||||||||||||||||||| Sbjct: 337 ccggcggcatcaacccgctccacagccacccgcgcgccaccgag 380
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 425 tcgtcgacacggccggccgcctc 447 ||||||||||||||||||||||| Sbjct: 561877 tcgtcgacacggccggccgcctc 561855
>ref|XM_476095.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctcg 403 |||||||||| ||||||||||||||||||| | || | ||||||||| | || |||| Sbjct: 335 ccggcggcgttttcccgccgcactaccacccgagggcgtcggagacggcggtggtgctcg 394 Query: 404 ccggccgcgtctac 417 ||||| ||||||| Sbjct: 395 ccggcgccgtctac 408
>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07, complete sequence Length = 114135 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctcg 403 |||||||||| ||||||||||||||||||| | || | ||||||||| | || |||| Sbjct: 111344 ccggcggcgttttcccgccgcactaccacccgagggcgtcggagacggcggtggtgctcg 111403 Query: 404 ccggccgcgtctac 417 ||||| ||||||| Sbjct: 111404 ccggcgccgtctac 111417
>ref|NM_187721.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 355 aacccgccgcactaccacccgcgcgccaccgaga 388 |||||||||||| ||||||||||||||||||| Sbjct: 316 aacccgccgcacacgcacccgcgcgccaccgaga 349
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04, complete sequence Length = 141171 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 344 ccggcggcgtcaacccgccgcactaccacccgcgcgccaccgagacggcgctcgtcctcg 403 |||||||||| ||||||||||||||||||| | || | ||||||||| | || |||| Sbjct: 42154 ccggcggcgttttcccgccgcactaccacccgagggcgtcggagacggcggtggtgctcg 42213 Query: 404 ccggccgcgtctac 417 ||||| ||||||| Sbjct: 42214 ccggcgccgtctac 42227
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 425 tcgtcgacacggccggccgcct 446 |||||||||||||||||||||| Sbjct: 1148945 tcgtcgacacggccggccgcct 1148966
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 355 aacccgccgcactaccacccgcgcgccaccgaga 388 |||||||||||| ||||||||||||||||||| Sbjct: 114029 aacccgccgcacacgcacccgcgcgccaccgaga 113996
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 355 aacccgccgcactaccacccgcgcgccaccgaga 388 |||||||||||| ||||||||||||||||||| Sbjct: 31874 aacccgccgcacacgcacccgcgcgccaccgaga 31841
>dbj|AK061164.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-A06, full insert sequence Length = 925 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 355 aacccgccgcactaccacccgcgcgccaccgaga 388 |||||||||||| ||||||||||||||||||| Sbjct: 387 aacccgccgcacacgcacccgcgcgccaccgaga 420
>gb|AY108860.1| Zea mays PCO074541 mRNA sequence Length = 589 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 485 tcccccgcggcatggtgcacttccagctcaacgtcggc 522 |||| |||||| | |||||||||||| ||||||||||| Sbjct: 33 tcccgcgcggcctcgtgcacttccagttcaacgtcggc 70
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence Length = 1313 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 534 caccgtctacggcaccttcaacagcg 559 ||||||||||||||||| |||||||| Sbjct: 784 caccgtctacggcacctccaacagcg 809
>dbj|AB036797.1| Barbula unguiculata BuGLP mRNA for germin-like protein, complete cds Length = 927 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 346 ggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||| ||||||| || ||| ||||||||||||||||||| Sbjct: 400 ggcggcatcaacccaccccacatccacccgcgcgccaccgag 441
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 gttcgtcgacacggccggccgc 444 |||||||||||||||||||||| Sbjct: 1463762 gttcgtcgacacggccggccgc 1463783
>gb|AF032974.1|AF032974 Oryza sativa germin-like protein 4 (GER4) mRNA, complete cds Length = 908 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 355 aacccgccgcactaccacccgcgcgccaccgaga 388 |||||||||||| ||||||||||||||||||| Sbjct: 369 aacccgccgcacacgcacccgcgcgccaccgaga 402
>dbj|AB028454.1| Barbula unguiculata mRNA for germin-like protein, partial cds Length = 742 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 346 ggcggcgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||| ||||||| || ||| ||||||||||||||||||| Sbjct: 215 ggcggcatcaacccaccccacatccacccgcgcgccaccgag 256
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 355 aacccgccgcactaccacccgcgcgccaccgaga 388 |||||||||||| ||||||||||||||||||| Sbjct: 91159 aacccgccgcacacgcacccgcgcgccaccgaga 91126
>gb|AF542528.2| Cryptococcus neoformans var. grubii strain 125.91 mating type a locus, complete sequence Length = 153973 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 ctacggcaccttcaacagcga 560 ||||||||||||||||||||| Sbjct: 76895 ctacggcaccttcaacagcga 76915
>ref|XM_525820.1| PREDICTED: Pan troglodytes similar to lung inducible neuralized-related C3HC4 RING finger protein (LOC470439), mRNA Length = 879 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 cggccgcctcttcgccaaggt 458 ||||||||||||||||||||| Sbjct: 480 cggccgcctcttcgccaaggt 500
>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16, complete sequence Length = 139615 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 66 cgtgctgctccgggcggcggccacggccg 94 |||||||| ||||||||||||||| |||| Sbjct: 101327 cgtgctgccccgggcggcggccaccgccg 101355
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 66 cgtgctgctccgggcggcggccacggccg 94 |||||||| ||||||||||||||| |||| Sbjct: 20487 cgtgctgccccgggcggcggccaccgccg 20515
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 tcggcgaccagccggccaccg 538 ||||||||||||||||||||| Sbjct: 1371482 tcggcgaccagccggccaccg 1371502
>emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3 Length = 1027 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 354 caacccgccgcactaccacccgcgcgccaccga 386 ||||||||||||| |||||||||||| ||||| Sbjct: 380 caacccgccgcacatccacccgcgcgctaccga 412 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||| ||||| Sbjct: 583 ccttcaacagccagaaccccggaatcgt 610
>emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1 Length = 856 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcat 572 ||||||||||| ||||||||||||| Sbjct: 610 ccttcaacagccagaaccccggcat 634
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 tcggcgaccagccggccaccg 538 ||||||||||||||||||||| Sbjct: 338207 tcggcgaccagccggccaccg 338227
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 tcggcgaccagccggccaccg 538 ||||||||||||||||||||| Sbjct: 58638 tcggcgaccagccggccaccg 58658
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 ctacggcaccttcaacagcga 560 ||||||||||||||||||||| Sbjct: 48590 ctacggcaccttcaacagcga 48570
>gb|AC090110.5| Homo sapiens 12 BAC RP11-495K13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 30272 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 ccatcttgccctcctcctgct 62 ||||||||||||||||||||| Sbjct: 10222 ccatcttgccctcctcctgct 10202
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 351 cgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||||| |||||||||| || ||||| Sbjct: 22396698 cgtcaacccgccgcacacccacccgcgctccgccgag 22396662 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 496 atggtgcacttccagctcaacgtcggcgaccagccggcca 535 ||||||||||||||| ||||| ||| |||||||||||| Sbjct: 22399029 atggtgcacttccagttcaactccgggaaccagccggcca 22398990 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 493 ggcatggtgcacttccagctcaac 516 |||||||||||||||||| ||||| Sbjct: 22394256 ggcatggtgcacttccagttcaac 22394233
>gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor, mRNA, complete cds Length = 1012 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcat 572 ||||||||||| ||||||||||||| Sbjct: 609 ccttcaacagccagaaccccggcat 633
>gb|AF261942.1|AF261942 Zea mays clone AW042316 germin-like protein 2 (GLP2) mRNA, partial cds Length = 591 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 490 cgcggcatggtgcacttccagctcaacgtcggc 522 |||||| | |||||||||||| ||||||||||| Sbjct: 7 cgcggcctcgtgcacttccagttcaacgtcggc 39
>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1003_C09 Length = 124746 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 351 cgtcaacccgccgcactaccacccgcgcgccaccgag 387 |||||||||||||||| |||||||||| || ||||| Sbjct: 33187 cgtcaacccgccgcacacccacccgcgctccgccgag 33151 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 496 atggtgcacttccagctcaacgtcggcgaccagccggcca 535 ||||||||||||||| ||||| ||| |||||||||||| Sbjct: 35518 atggtgcacttccagttcaactccgggaaccagccggcca 35479 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 493 ggcatggtgcacttccagctcaac 516 |||||||||||||||||| ||||| Sbjct: 30745 ggcatggtgcacttccagttcaac 30722
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 ggtcacgccggcgcagttcccgggg 297 |||||||||||||||||||| |||| Sbjct: 571230 ggtcacgccggcgcagttccagggg 571254
>gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds Length = 2822 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcat 572 ||||||||||| ||||||||||||| Sbjct: 2322 ccttcaacagccagaaccccggcat 2346
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 98015 cgccggccgcgtctacgccg 97996
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ccggccgcctcttcgccaag 456 |||||||||||||||||||| Sbjct: 784315 ccggccgcctcttcgccaag 784334 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ccggccgcctcttcgccaag 456 |||||||||||||||||||| Sbjct: 783547 ccggccgcctcttcgccaag 783566
>ref|XM_610773.2| PREDICTED: Bos taurus similar to synaptosomal-associated protein 29 (LOC532261), mRNA Length = 2752 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 67 gtgctgctccgggcggcggccacggccg 94 ||||||| |||||||| ||||||||||| Sbjct: 676 gtgctgcgccgggcggaggccacggccg 703
>gb|AF486581.1| Uncultured bacterium aminoglycoside 3'-N-acetyltransferase gene, complete cds Length = 38269 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 544 ggcaccttcaacagcgagaacccc 567 |||||||||| ||||||||||||| Sbjct: 32822 ggcaccttcaccagcgagaacccc 32845
>ref|XM_001000127.1| PREDICTED: Mus musculus hypothetical protein LOC672641 (LOC672641), mRNA Length = 369 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 32 cgccggccgcgtctacgccg 51
>ref|XM_001001588.1| PREDICTED: Mus musculus dedicator of cytokinesis 5, transcript variant 1 (Dock5), mRNA Length = 4084 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 126 cgccggccgcgtctacgccg 107
>ref|XM_001001616.1| PREDICTED: Mus musculus dedicator of cytokinesis 5, transcript variant 2 (Dock5), mRNA Length = 10296 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 126 cgccggccgcgtctacgccg 107
>ref|XM_984250.1| PREDICTED: Mus musculus hypothetical protein LOC675682 (LOC675682), mRNA Length = 369 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 32 cgccggccgcgtctacgccg 51
>ref|XM_619262.3| PREDICTED: Mus musculus dedicator of cytokinesis 5, transcript variant 2 (Dock5), mRNA Length = 4084 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 126 cgccggccgcgtctacgccg 107
>ref|XM_619261.3| PREDICTED: Mus musculus dedicator of cytokinesis 5, transcript variant 1 (Dock5), mRNA Length = 10273 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 126 cgccggccgcgtctacgccg 107
>ref|XM_990099.1| PREDICTED: Mus musculus dedicator of cytokinesis 5, transcript variant 3 (Dock5), mRNA Length = 10336 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 126 cgccggccgcgtctacgccg 107
>ref|XM_001001274.1| PREDICTED: Mus musculus hypothetical protein LOC668401 (LOC668401), mRNA Length = 369 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 32 cgccggccgcgtctacgccg 51
>ref|XM_001003628.1| PREDICTED: Mus musculus RIKEN cDNA 1110060D06 gene, transcript variant 1 (1110060D06Rik), mRNA Length = 4084 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 126 cgccggccgcgtctacgccg 107
>ref|XM_001003643.1| PREDICTED: Mus musculus RIKEN cDNA 1110060D06 gene, transcript variant 4 (1110060D06Rik), mRNA Length = 10272 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 126 cgccggccgcgtctacgccg 107
>ref|XM_001003634.1| PREDICTED: Mus musculus RIKEN cDNA 1110060D06 gene, transcript variant 2 (1110060D06Rik), mRNA Length = 10335 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 126 cgccggccgcgtctacgccg 107
>ref|XM_843045.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0443) partial mRNA Length = 6774 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 ccggccgcctcttcgccaag 456 |||||||||||||||||||| Sbjct: 3665 ccggccgcctcttcgccaag 3646 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 ccggccgcctcttcgccaag 456 |||||||||||||||||||| Sbjct: 2897 ccggccgcctcttcgccaag 2878
>ref|XM_816175.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506401.140) partial mRNA Length = 4506 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 ccggccgcctcttcgccaag 456 |||||||||||||||||||| Sbjct: 103 ccggccgcctcttcgccaag 84
>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis gene cluster, partial sequence Length = 103450 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggccacggccgacccggac 102 |||||||||||||||||||| Sbjct: 99234 cggccacggccgacccggac 99253
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctgctcgccgtgctgctcc 76 |||||||||||||||||||| Sbjct: 727178 cctgctcgccgtgctgctcc 727159
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 96855 cgccggccgcgtctacgccg 96836
>emb|AJ878068.1| Methylobacterium dichloromethanicum DM4 partial mxaF gene for methanol dehydrogenase alpha subunit, strain DSM 6343 Length = 853 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 195 caccgcgggcgacttcgtcttctccggc 222 ||||||||||||| ||||||||| |||| Sbjct: 720 caccgcgggcgacctcgtcttctacggc 747
>emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (HvOxOa) Length = 970 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| ||||||| |||||||| Sbjct: 616 ccttcaacagccagaaccctggcatcgt 643
>emb|Y09918.1|TAPSBGER4 T.aestivum mRNA for germin-like protein 4, partial Length = 572 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 |||||||||| |||||||||||||||| Sbjct: 170 ccttcaacagacagaaccccggcatcgt 197
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cggtcacgccggcgcagttc 291 |||||||||||||||||||| Sbjct: 51464 cggtcacgccggcgcagttc 51445
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cggtcacgccggcgcagttc 291 |||||||||||||||||||| Sbjct: 164745 cggtcacgccggcgcagttc 164726
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gccggacgccggacgccggc 142 |||||||||||||||||||| Sbjct: 29795 gccggacgccggacgccggc 29776
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 cctcctgctcgccgtgctgc 73 |||||||||||||||||||| Sbjct: 47477 cctcctgctcgccgtgctgc 47458
>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene) Length = 828 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| ||||||| |||||||| Sbjct: 521 ccttcaacagccagaacccaggcatcgt 548
>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene) Length = 867 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| ||||||| |||||||| Sbjct: 521 ccttcaacagccagaacccaggcatcgt 548
>gb|AC099785.2| Homo sapiens chromosome 1 clone RP11-435I3, complete sequence Length = 186160 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 ccatcttgccctcctcctgc 61 |||||||||||||||||||| Sbjct: 111384 ccatcttgccctcctcctgc 111365
>gb|AC090431.9| Mus Musculus Strain C57BL6/J chromosome 14 RP23-324C9, complete sequence Length = 227949 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccggccgcgtctacgccg 421 |||||||||||||||||||| Sbjct: 95936 cgccggccgcgtctacgccg 95917
>emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxidase precursor (OXO1 gene) Length = 675 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| |||||||||| ||||| Sbjct: 524 ccttcaacagccagaaccccggtatcgt 551
>gb|AC136213.2| Leishmania major strain Friedlin chromosome 27 clone LB02059, complete sequence Length = 102826 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ccggccgcctcttcgccaag 456 |||||||||||||||||||| Sbjct: 39138 ccggccgcctcttcgccaag 39157 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ccggccgcctcttcgccaag 456 |||||||||||||||||||| Sbjct: 38370 ccggccgcctcttcgccaag 38389
>gb|DQ336283.1| Vitis pseudoreticulata auxin-binding protein mRNA, complete cds Length = 414 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gcagtgcaggacttctgcgt 122 |||||||||||||||||||| Sbjct: 52 gcagtgcaggacttctgcgt 71
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ctccggcgtgcgcgcggcgg 235 |||||||||||||||||||| Sbjct: 2543628 ctccggcgtgcgcgcggcgg 2543609
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tcctcctgctcgccgtgctg 72 |||||||||||||||||||| Sbjct: 137591 tcctcctgctcgccgtgctg 137610
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 ggccggcggcgtcaacccgccgca 365 |||||||||||||| ||||||||| Sbjct: 6309665 ggccggcggcgtcatcccgccgca 6309642
>gb|M31108.1|MTBMOXFJ M.extorquens methanol dehydrogenase (moxF) and 30 kD protein (moxJ) genes, complete cds, and moxG gene, 5' end Length = 4500 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 195 caccgcgggcgacttcgtcttctccggc 222 ||||||||||||| ||||||||| |||| Sbjct: 2813 caccgcgggcgacctcgtcttctacggc 2840
>dbj|AK109010.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H10, full insert sequence Length = 1035 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 496 atggtgcacttccagctcaacgtcggcgaccagccggcca 535 ||||||||||||||| ||||| ||| |||||||||||| Sbjct: 536 atggtgcacttccagttcaactccgggaaccagccggcca 575
>dbj|AK108987.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F08, full insert sequence Length = 1026 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 493 ggcatggtgcacttccagctcaac 516 |||||||||||||||||| ||||| Sbjct: 495 ggcatggtgcacttccagttcaac 518
>emb|BX545913.21| Zebrafish DNA sequence from clone DKEY-208P1 in linkage group 17, complete sequence Length = 188037 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gcaccatcttgccctcctcc 58 |||||||||||||||||||| Sbjct: 130595 gcaccatcttgccctcctcc 130576
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 ttcgtcgacacggccggccgcctc 447 ||||||||||||||||| |||||| Sbjct: 39463 ttcgtcgacacggccggtcgcctc 39440
>gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds Length = 603 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 ccttcaacagcgagaaccccggcatcgt 575 ||||||||||| ||||||| |||||||| Sbjct: 455 ccttcaacagccagaaccctggcatcgt 482 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,437,184 Number of Sequences: 3902068 Number of extensions: 3437184 Number of successful extensions: 86816 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83836 Number of HSP's gapped (non-prelim): 2973 length of query: 583 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 560 effective length of database: 17,143,297,704 effective search space: 9600246714240 effective search space used: 9600246714240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
