ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13a01 |
|---|---|
| Clone Library Name | barley_pub |
>ATPO_IPOBA (P22778) ATP synthase delta chain, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 244 Score = 135 bits (339), Expect = 1e-31 Identities = 78/178 (43%), Positives = 99/178 (55%), Gaps = 11/178 (6%) Frame = +1 Query: 79 MAARHLRSGLPLLQARLAATESAAV-----------AQVSRGLATQVDKPAENKIKVPKA 225 M R G +LQ L++ + + +++ R AT E KIKVP Sbjct: 3 MTGRARSMGFSILQKALSSAQRSNAHRSILCPTLSNSELLRNYAT-ASASKEQKIKVPLT 61 Query: 226 LYGGTGNYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAV 405 +YG +GNY EKVESE+ D+V A KKSP FSQF++D SVP TRV A+ Sbjct: 62 MYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKSPTFSQFMRDPSVPVDTRVNAI 121 Query: 406 TEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDLTMAHRGEXXXXXXXXXALP 579 EI A+AKF D TQNFL +LA NGRLK ++RI +RF +LTMAHRGE LP Sbjct: 122 KEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKELTMAHRGEVKATVTTVIPLP 179
>ATPO_ARATH (Q96251) ATP synthase delta chain, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 238 Score = 105 bits (263), Expect = 7e-23 Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 5/170 (2%) Frame = +1 Query: 85 ARHLRSGLPLLQARLAATESAAVAQVSR---GLATQVDKPAEN--KIKVPKALYGGTGNY 249 A RSG+ + +A T+S + + L T A+ +KVP AL G GN+ Sbjct: 2 ANRFRSGISFFKT-IAVTDSVSSVRSKSLFPALRTYATASAQTTANVKVPIALVGENGNF 60 Query: 250 XXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAK 429 EK+E+++ +++ A+K +P+F+QF KD SVP+ TR+ A+ + +AK Sbjct: 61 ASWLYIAAVKMNSLEKIETDLSEMIEAMKTAPIFAQFTKDPSVPRGTRLAAIRDACDQAK 120 Query: 430 FSDITQNFLSVLASNGRLKFVERIAERFVDLTMAHRGEXXXXXXXXXALP 579 F++ T+NFLS+LA NG+LK ++ I ++F+ LT AHRG+ LP Sbjct: 121 FAEPTKNFLSLLAENGKLKNLDAIVKKFMQLTNAHRGDVKVLVTTVIPLP 170
>ATPO_BOVIN (P13621) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 72.4 bits (176), Expect = 9e-13 Identities = 42/150 (28%), Positives = 72/150 (48%) Frame = +1 Query: 127 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 306 +AA + ++Q R +T V +P ++ P +YG G Y E+VE Sbjct: 1 MAALAVSGLSQQVRCFSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEK 60 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 E+ V G + K P + + + V ++ +VK+++++ A+ KFS +T N +++LA NGRL Sbjct: 61 ELLRV-GQILKEPKMAASLLNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLT 119 Query: 487 FVERIAERFVDLTMAHRGEXXXXXXXXXAL 576 + F + HRGE AL Sbjct: 120 NTPAVISAFSTMMSVHRGEVPCTVTTASAL 149
>ATPO_RAT (Q06647) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 69.3 bits (168), Expect = 7e-12 Identities = 38/139 (27%), Positives = 70/139 (50%) Frame = +1 Query: 127 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 306 +AA ++ +++ R +T V +P ++ P +YG G Y ++VE Sbjct: 1 MAAPATSVLSRQVRSFSTSVVRPFSKLVRPPVQVYGIEGRYATALYSAASKQKRLDQVEK 60 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 E+ V G + K P S + + + ++ +VK++ +I + KFS +T N +++LA NGRL Sbjct: 61 ELLRV-GQLLKDPKVSLAVLNPYIKRSIKVKSLKDITTKEKFSPLTANLMNLLAENGRLG 119 Query: 487 FVERIAERFVDLTMAHRGE 543 + + F + HRGE Sbjct: 120 NTQGVISAFSTIMSVHRGE 138
>ATPO_MOUSE (Q9DB20) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 68.9 bits (167), Expect = 1e-11 Identities = 39/139 (28%), Positives = 68/139 (48%) Frame = +1 Query: 127 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 306 +AA ++ +++ R +T V +P ++ P +YG G Y ++VE Sbjct: 1 MAAPAASGLSRQVRSFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKEKKLDQVEK 60 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 E+ V G + K P S + + + + +VK++ +I KFS +T N +++LA NGRL Sbjct: 61 ELLRV-GQLLKDPKVSLAVLNPYIKRTVKVKSLNDITKREKFSPLTANLMNLLAENGRLG 119 Query: 487 FVERIAERFVDLTMAHRGE 543 + I F + HRGE Sbjct: 120 NTQGIISAFSTIMSVHRGE 138
>ATPO_HUMAN (P48047) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 67.8 bits (164), Expect = 2e-11 Identities = 38/139 (27%), Positives = 69/139 (49%) Frame = +1 Query: 127 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 306 +AA + +++ R +T V +P ++ P +YG G Y E+VE Sbjct: 1 MAAPAVSGLSRQVRCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEK 60 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 E+ V + K P + + + V ++ +VK++ +I A+ +FS +T N +++LA NGRL Sbjct: 61 ELLRVA-QILKEPKVAASVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLS 119 Query: 487 FVERIAERFVDLTMAHRGE 543 + + F + HRGE Sbjct: 120 NTQGVVSAFSTMMSVHRGE 138
>ATPO_PONPY (Q5RD23) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 67.0 bits (162), Expect = 4e-11 Identities = 38/139 (27%), Positives = 69/139 (49%) Frame = +1 Query: 127 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 306 +A + +++ R +T V +P ++ P +YG G Y E+VE Sbjct: 1 MATPAVSGLSRQVRCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEK 60 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 E+ V + K P + + + V ++ +VK++ +I A+ +FS +T N +++LA NGRL Sbjct: 61 ELLRVA-QILKEPKVAAPVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLS 119 Query: 487 FVERIAERFVDLTMAHRGE 543 + + F + AHRGE Sbjct: 120 NTQGVVSAFSTMMSAHRGE 138
>ATPO_DROME (Q24439) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 209 Score = 56.6 bits (135), Expect = 5e-08 Identities = 31/131 (23%), Positives = 60/131 (45%) Frame = +1 Query: 151 VAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVESEIGDVVGA 330 +A +SR L++ A+ +K P ++G G Y ++VE ++ + Sbjct: 7 LALLSRTLSSAA---AQATVKPPVQVFGLEGRYATALYSAASKLSQLDQVEKDLTALQAT 63 Query: 331 VKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAER 510 ++ +++ + K A+ E + +F+ T N L +LA NGRLK ++ + Sbjct: 64 IRSDKKLREYVTSPIINKKVMATALKEASEKLRFAPATVNLLGLLADNGRLKKLDTVINA 123 Query: 511 FVDLTMAHRGE 543 + + AHRGE Sbjct: 124 YKTIMAAHRGE 134
>ATPO_NEUCR (Q9P602) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 220 Score = 52.0 bits (123), Expect = 1e-06 Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 6/138 (4%) Frame = +1 Query: 148 AVAQVSRGLATQVDK-----PAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVESEI 312 A+ + +R L TQV A +K+K P L+G G Y E I Sbjct: 6 ALLRPARVLNTQVRTYAAAAAASSKVKPPVTLFGLDGTYATALYTAAVKTSALEPTAKAI 65 Query: 313 GDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDIT-QNFLSVLASNGRLKF 489 + + K P + ++ ++ A + V E+ S+ T +NFL+ LA N RL Sbjct: 66 SSLGNLLAKDPKLASILETPTLSPADKSAIVAELQKSVGVSNETVKNFLATLAENNRLGL 125 Query: 490 VERIAERFVDLTMAHRGE 543 + + +F +L A RGE Sbjct: 126 LPSVVAKFSELMSAARGE 143
>ATPO_SCHPO (O74479) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 216 Score = 50.1 bits (118), Expect = 5e-06 Identities = 29/109 (26%), Positives = 48/109 (44%) Frame = +1 Query: 217 PKALYGGTGNYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRV 396 P LYG G+Y + VE + + G +++ P F Q+I + + + Sbjct: 33 PVQLYGLDGSYASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKK 92 Query: 397 KAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDLTMAHRGE 543 V+ + + +NF +VL N RL + RI ++F L A RGE Sbjct: 93 ILVSSLTQMTGNEPLLKNFYNVLLDNHRLYLLTRIQKQFSTLMRAKRGE 141
>ATPO_KLULA (O74190) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 206 Score = 48.1 bits (113), Expect = 2e-05 Identities = 30/126 (23%), Positives = 48/126 (38%) Frame = +1 Query: 163 SRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKS 342 SR + A+ +K P L+G G Y E S + + V K Sbjct: 3 SRVFVRSMAASAKAGVKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAKD 62 Query: 343 PMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDL 522 + +++ ++ R V + + QN L VLA N RL +E + +F L Sbjct: 63 TKLTSILENPALSAEDRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSKL 122 Query: 523 TMAHRG 540 T A+ G Sbjct: 123 TDAYHG 128
>ATPO_ASHGO (Q75EZ3) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 207 Score = 47.0 bits (110), Expect = 4e-05 Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 1/127 (0%) Frame = +1 Query: 163 SRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKS 342 SR + A+ +K P L+G G Y E + + + K Sbjct: 3 SRVFVRSLAAAAKAGVKPPIQLFGLEGTYASALFTAASKTTSIESAGKALASLSKTIAKD 62 Query: 343 PMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDIT-QNFLSVLASNGRLKFVERIAERFVD 519 + + ++P R V + + D QN + VLA N RL ++ +A F Sbjct: 63 AKLGAILANPALPAGDRTVVVQTLAQKTPGMDAAVQNLMQVLAENNRLNLLQGVAGEFTK 122 Query: 520 LTMAHRG 540 LT AH G Sbjct: 123 LTDAHNG 129
>ATPO_CANGA (Q6FSD5) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 207 Score = 42.4 bits (98), Expect = 0.001 Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 1/127 (0%) Frame = +1 Query: 163 SRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKS 342 SR A+ +K P L+G G Y E S + + +K+ Sbjct: 3 SRVFVRAASNAAKAGVKPPVKLFGVEGTYASALFTAASKETSVESASSSLVKLSSLIKED 62 Query: 343 PMFSQFIKDSSVPKATRVKAVTEIF-AEAKFSDITQNFLSVLASNGRLKFVERIAERFVD 519 +++ ++ R V + + A N L VLA N +L ++I+ +F Sbjct: 63 AKLKHIMENPALSTKDRAVVVDSLVKSSANLDKPVVNLLKVLAENNKLGLFDKISSQFSI 122 Query: 520 LTMAHRG 540 L AH G Sbjct: 123 LNDAHNG 129
>ATPO_YEAST (P09457) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 212 Score = 39.7 bits (91), Expect = 0.006 Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 1/109 (0%) Frame = +1 Query: 217 PKALYGGTGNYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRV 396 P L+G G Y + + V VKK+P + + ++ R Sbjct: 26 PVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRN 85 Query: 397 KAVTEIFAEAKFSD-ITQNFLSVLASNGRLKFVERIAERFVDLTMAHRG 540 + I K D N L VL+ N RL E+IA F L AH G Sbjct: 86 SVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNG 134
>ATPD_RHORU (P05438) ATP synthase delta chain (EC 3.6.3.14)| Length = 186 Score = 36.2 bits (82), Expect = 0.070 Identities = 23/95 (24%), Positives = 45/95 (47%) Frame = +1 Query: 292 EKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLAS 471 ++V +++ + + +S + I + + + KA+T + +A F +I +NFL V+A+ Sbjct: 30 DQVSADLRSLKAMLDESGDLRRVIASPVIGRDDQRKALTALAEKAGFHEIVRNFLGVVAA 89 Query: 472 NGRLKFVERIAERFVDLTMAHRGEXXXXXXXXXAL 576 R V + F++ A RGE AL Sbjct: 90 KHRSFAVPGMIGAFLERLAARRGEVTARIVSATAL 124
>ATPD_OCHNE (Q40610) ATP synthase delta chain, chloroplast (EC 3.6.3.14)| Length = 179 Score = 35.8 bits (81), Expect = 0.091 Identities = 14/57 (24%), Positives = 37/57 (64%) Frame = +1 Query: 355 QFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDLT 525 +F+ + + + + + ++ E + S ++ NFL +L + GR+ F+++IA++F++L+ Sbjct: 46 KFLGNPLITRERKKNVLKDVLGE-QISSVSLNFLMLLVNRGRVAFLDKIAQKFLELS 101
>POLG_CSFVB (P21530) Genome polyprotein [Contains: N-terminal protease (EC| 3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Nonstructural protein 2 Length = 3898 Score = 32.3 bits (72), Expect = 1.0 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = +1 Query: 304 SEIGDVVGA-VKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGR 480 + +G V G VK P+F Q D P R A E F EA+F ++T+ V S+G+ Sbjct: 73 NHLGPVSGIYVKPGPVFYQ---DYMGPVYHR--APLEFFDEAQFCEVTKRIGRVTGSDGK 127 Query: 481 LKFVERIAERFVDLTMAHRGE 543 L + + + L +A RGE Sbjct: 128 LYHIYVCIDGCILLKLAKRGE 148
>ATPO_PEA (P17604) ATP synthase delta chain, mitochondrial (EC 3.6.3.14)| (Oligomycin sensitivity conferral protein) (OSCP) (Fragment) Length = 38 Score = 32.3 bits (72), Expect = 1.0 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 181 QVDKPAENKIKVPKALYGGTGNY 249 QV E KIKVP A++GG+GNY Sbjct: 2 QVPGZKETKIKVPIAMFGGSGNY 24
>MRAW_SALTI (Q8Z9H4) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 313 Score = 31.2 bits (69), Expect = 2.2 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Frame = +1 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQ---NFLSVLASNG 477 E+ +VV A +KD ATR I+ ++ +I Q + LSVLAS G Sbjct: 182 ELAEVVAAATP-------VKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLASGG 234 Query: 478 RLKFV------ERIAERFV 516 RL + +RI +RF+ Sbjct: 235 RLSIISFHSLEDRIVKRFM 253
>ATPD_SORBI (Q07300) ATP synthase delta chain, chloroplast precursor (EC| 3.6.3.14) Length = 247 Score = 30.8 bits (68), Expect = 2.9 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 1/132 (0%) Frame = +1 Query: 130 AATESAAVAQVSRGLAT-QVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 306 AA SA+ A+ +RGL + ++ P V +Y E+ S Sbjct: 28 AAPRSASFARAARGLPSLRLAPPRRRGDLVRPRAEAAADSYASALSEVAVENGTLEQTVS 87 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 ++ + + + ++F + +VP+ + + EI + NF++V+ N R Sbjct: 88 DL-EKLQKIFADETVAEFFDNPTVPREEKTALIDEIAKSYELQPHVVNFINVVVDNFRAT 146 Query: 487 FVERIAERFVDL 522 + I F ++ Sbjct: 147 ILPEIVVEFENI 158
>RASA3_BOVIN (Q28013) Ras GTPase-activating protein 3 (GAP1(IP4BP)) (Ins| P4-binding protein) Length = 834 Score = 30.8 bits (68), Expect = 2.9 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +1 Query: 382 KATRVKAVTEIFAEAKFSDITQNFLSVLASNGR 480 K + + A E F E K++D +NFL +++S+GR Sbjct: 534 KESYMAAFYEFFNEQKYADAVKNFLDLISSSGR 566
>ATPD_STRR6 (P0A2Z5) ATP synthase delta chain (EC 3.6.3.14)| Length = 178 Score = 30.8 bits (68), Expect = 2.9 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 12/93 (12%) Frame = +1 Query: 292 EKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLAS 471 +++ S++ + V+K+ + S F+K +V ++ + K + F + S + QNF+ VLA Sbjct: 27 DRIFSDLTQIKQVVEKTGLPS-FLKQVAVDESDKEKTIA--FFQDSVSPLLQNFIQVLAY 83 Query: 472 NGR-----------LKFVERIAERF-VDLTMAH 534 N R L +E+ RF V +T AH Sbjct: 84 NHRANLFYDVLVDCLNRLEKETNRFEVTITSAH 116
>ATPD_STRPN (P0A2Z4) ATP synthase delta chain (EC 3.6.3.14)| Length = 178 Score = 30.8 bits (68), Expect = 2.9 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 12/93 (12%) Frame = +1 Query: 292 EKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLAS 471 +++ S++ + V+K+ + S F+K +V ++ + K + F + S + QNF+ VLA Sbjct: 27 DRIFSDLTQIKQVVEKTGLPS-FLKQVAVDESDKEKTIA--FFQDSVSPLLQNFIQVLAY 83 Query: 472 NGR-----------LKFVERIAERF-VDLTMAH 534 N R L +E+ RF V +T AH Sbjct: 84 NHRANLFYDVLVDCLNRLEKETNRFEVTITSAH 116
>SEC10_YEAST (Q06245) Exocyst complex component SEC10| Length = 871 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = +1 Query: 322 VGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVE 495 V +K + S ++ SS+PK K V E ++E +++ +NF S N K E Sbjct: 196 VKLMKNLLILSSKLETSSIPKTINTKLVIEKYSEMMENELLENFNSAYRENNFTKLNE 253
>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)| Length = 2570 Score = 29.6 bits (65), Expect = 6.5 Identities = 19/69 (27%), Positives = 21/69 (30%) Frame = +3 Query: 357 IHKGLISAKSNQGEGCNRNIR*SQVF*HHTEFLVCTGVQWKTEIC*THCGEIC*FDHGTQ 536 +H L G GC+RN C WK C H G C Sbjct: 1931 VHPSLWGRPQGLGRGCHRN---------------CVTTTWKPSCCPGHYGSEC---QACP 1972 Query: 537 GGGESCCQD 563 GG S C D Sbjct: 1973 GGPSSPCSD 1981
>RASA3_MOUSE (Q60790) Ras GTPase-activating protein 3 (GAP1(IP4BP)) (Ins| P4-binding protein) (GapIII) Length = 834 Score = 29.3 bits (64), Expect = 8.5 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = +1 Query: 409 EIFAEAKFSDITQNFLSVLASNGR 480 E F E K++D +NFL +++S+GR Sbjct: 543 EFFNEQKYADAVKNFLDLISSSGR 566
>RASA3_HUMAN (Q14644) Ras GTPase-activating protein 3 (GAP1(IP4BP)) (Ins| P4-binding protein) Length = 834 Score = 29.3 bits (64), Expect = 8.5 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = +1 Query: 409 EIFAEAKFSDITQNFLSVLASNGR 480 E F E K++D +NFL +++S+GR Sbjct: 543 EFFNEQKYADAVKNFLDLISSSGR 566
>KPTA_CLOPE (Q8XP22) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)| Length = 183 Score = 29.3 bits (64), Expect = 8.5 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 4/118 (3%) Frame = +1 Query: 118 QARLAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEK 297 + R + E + + ++G + +VD E IK PK LY GTG + Sbjct: 63 KGRYSFNEDKSKIRANQGHSIKVDLGLE-AIKPPKVLYHGTGR---------------KY 106 Query: 298 VESEIGDVVGAVKKSPMFSQFIKD----SSVPKATRVKAVTEIFAEAKFSDITQNFLS 459 +ES + + G +KK + KD S V K + E+ +E+ F D + +LS Sbjct: 107 IESILKN--GLIKKERQYVHLSKDIETASIVGKRHGDLVILEVDSESMFKDGIKFYLS 162 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.130 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,315,038 Number of Sequences: 219361 Number of extensions: 1149536 Number of successful extensions: 3304 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3011 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3283 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
