>YIPF5_MOUSE (Q9EQQ2) Protein YIPF5 (YIP1 domain family member 5)|
           (YPT-interacting protein 1 A)
          Length = 257

 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 40/93 (43%), Positives = 50/93 (53%)
 Frame = +2

Query: 290 PPIFTGPIGGSGASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXX 469
           PP    P  G   SFE+EPPLLEELGIN   IW+KTL++LHPLR+AD S+  + D     
Sbjct: 74  PPTTPQPFYGD--SFEEEPPLLEELGINFDHIWQKTLTVLHPLRAADGSIMNETDLAGPV 131

Query: 470 XXXXXXXXXXXXAGKFHFGIVLGWVTVASLFLY 568
                       AGK  FG V G   +  L ++
Sbjct: 132 VFCLAFGATLLLAGKIQFGYVYGISAIGCLGMF 164

>YIPF5_MACFA (Q4R5M4) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 257

 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 37/82 (45%), Positives = 46/82 (56%)
 Frame = +2

Query: 323 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 502
           G SFEDEPPLLEELGIN   IW+KTL++LHPL+ AD S+  + D                
Sbjct: 83  GNSFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 142

Query: 503 XAGKFHFGIVLGWVTVASLFLY 568
            AGK  FG V G   +  L ++
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMF 164

>YIPF5_RAT (Q5XID0) Protein YIPF5 (YIP1 domain family member 5)|
           (YPT-interacting protein 1 A)
          Length = 257

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 36/82 (43%), Positives = 47/82 (57%)
 Frame = +2

Query: 323 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 502
           G SFE+EPPLLEELGIN   IW+KTL++LHPLR++D S+  + D                
Sbjct: 83  GDSFEEEPPLLEELGINFDHIWQKTLTVLHPLRASDGSIMNETDLAGPVVFCLAFGATLL 142

Query: 503 XAGKFHFGIVLGWVTVASLFLY 568
            AGK  FG V G   +  L ++
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMF 164

>YIPF5_XENLA (Q7SXS2) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 256

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 36/82 (43%), Positives = 47/82 (57%)
 Frame = +2

Query: 323 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 502
           G++F+DEPPLLEELGIN   IW+KTL++LHPL+ AD S+  + D                
Sbjct: 82  GSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 141

Query: 503 XAGKFHFGIVLGWVTVASLFLY 568
            AGK  FG V G   +  L +Y
Sbjct: 142 LAGKIQFGYVYGISAMGCLGMY 163

>YIPF5_BRARE (Q6P5I8) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 257

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
 Frame = +2

Query: 293 PIFTGPIGGS--GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXX 466
           P FT     S   +SFEDEPPLLEELGIN   IW+KTL++LHPL+++D S+  + D    
Sbjct: 71  PAFTPTSSQSMYSSSFEDEPPLLEELGINFDHIWQKTLTVLHPLKASDGSIMNETDLAGP 130

Query: 467 XXXXXXXXXXXXXAGKFHFGIVLGWVTVASLFLY 568
                         GK  FG V G   +  L +Y
Sbjct: 131 MVFCLAFGATLLLTGKIQFGYVYGISAIGCLGMY 164

>YIPF5_XENTR (Q66KA5) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 256

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 35/82 (42%), Positives = 47/82 (57%)
 Frame = +2

Query: 323 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 502
           G++F+DEPPLLEELGIN   IW+KTL++LHPL+ AD ++  + D                
Sbjct: 82  GSTFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETDLAGPMVFCLAFGATLL 141

Query: 503 XAGKFHFGIVLGWVTVASLFLY 568
            AGK  FG V G   +  L +Y
Sbjct: 142 LAGKIQFGYVYGISAIGCLGMY 163

>YIPF5_PONPY (Q5R6W5) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 257

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 36/82 (43%), Positives = 46/82 (56%)
 Frame = +2

Query: 323 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 502
           G +FEDEPPLLEELGIN   IW+KTL++LHPL+ AD S+  + D                
Sbjct: 83  GNNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 142

Query: 503 XAGKFHFGIVLGWVTVASLFLY 568
            AGK  FG V G   +  L ++
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMF 164

>YIPF5_HUMAN (Q969M3) Protein YIPF5 (YIP1 domain family member 5)|
           (YPT-interacting protein 1 A) (Five-pass transmembrane
           protein localizing in the Golgi apparatus and the
           endoplasmic reticulum 5) (Smooth muscle cell-associated
           protein 5) (SMAP-5)
          Length = 257

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 36/82 (43%), Positives = 46/82 (56%)
 Frame = +2

Query: 323 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 502
           G +FEDEPPLLEELGIN   IW+KTL++LHPL+ AD S+  + D                
Sbjct: 83  GNNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 142

Query: 503 XAGKFHFGIVLGWVTVASLFLY 568
            AGK  FG V G   +  L ++
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMF 164

>YIPF5_BOVIN (Q5E9E8) Protein YIPF5 (YIP1 domain family member 5)|
          Length = 257

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 36/82 (43%), Positives = 46/82 (56%)
 Frame = +2

Query: 323 GASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXXX 502
           G +FEDEPPLLEELGIN   IW+KTL++LHPL+ AD S+  + D                
Sbjct: 83  GNNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLL 142

Query: 503 XAGKFHFGIVLGWVTVASLFLY 568
            AGK  FG V G   +  L ++
Sbjct: 143 LAGKIQFGYVYGISAIGCLGMF 164

>YCB4_SCHPO (O94348) Uncharacterized protein C61.04c|
          Length = 227

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 28/85 (32%), Positives = 39/85 (45%)
 Frame = +2

Query: 320 SGASFEDEPPLLEELGINTRQIWRKTLSILHPLRSADPSLHADADXXXXXXXXXXXXXXX 499
           S + +  EP LLEEL IN   I +KT  +L+P +  D  +  D D               
Sbjct: 50  STSGYPGEPSLLEELEINFGHIKQKTTHVLNPFKHVDVHIMDDTDMAGPILFCLLFSTFL 109

Query: 500 XXAGKFHFGIVLGWVTVASLFLYFV 574
              G+ HFG + G   + SL L+FV
Sbjct: 110 SLHGRSHFGYIYGIALLGSLSLHFV 134

>YIP1_YEAST (P53039) Protein YIP1 (YPT-interacting protein 1)|
          Length = 248

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = +2

Query: 320 SGASFEDEPPLLEELGINTRQIWRKTLSILHPLR---SADPSLHADADXXXXXXXXXXXX 490
           S   +  EPPLLEE+GIN   I  KT  +L P+R        +  D+D            
Sbjct: 63  STKGYPHEPPLLEEIGINFDHIITKTKMVLIPIRFGSGVPQEILNDSDLAGPLIFFLLFG 122

Query: 491 XXXXXAGKFHFGIVLGWVTVASLFLY 568
                AGK HFG + G     ++ L+
Sbjct: 123 LFLLMAGKVHFGYIYGVALFGTISLH 148

>GDF6_HUMAN (Q6KF10) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 455

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 22  RRGQNPTPRSSQLPRSRNPRGRRGHGEGAPVFP 120
           R GQ P PR    PR++ PR +   G G  V P
Sbjct: 62  REGQEPQPRPQDEPRAQQPRAQEPPGRGPRVVP 94

>TINF2_MOUSE (Q9QXG9) TERF1-interacting nuclear factor 2 (TRF1-interacting|
           nuclear protein 2)
          Length = 341

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +2

Query: 245 LPFMSFDIPAQSNSTPPIFTGPIGGSGASFEDEPPLLEELGINTRQIWRKTLSILHP 415
           LPF +  +PAQ  S P     P   S AS   EP   EE    +R + ++ L    P
Sbjct: 275 LPFRNMGLPAQDLSNPKSREEPGAASAASVGTEPVCTEEAKTPSRPLGKRALEETPP 331

>PUR9_MYCPA (Q9RAJ5) Bifunctional purine biosynthesis protein purH [Includes:|
           Phosphoribosylaminoimidazolecarboxamide
           formyltransferase (EC 2.1.2.3) (AICAR transformylase);
           IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP
           synthetase) (ATIC)]
          Length = 527

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 537 PRTIPKWNLPARSWKRPKDKRNRKGPERSASAWSDGSA 424
           P T PKW    RSW+R    R  + P + AS +SD  A
Sbjct: 210 PTTFPKWL--GRSWRRSAMLRYGENPHQQASLYSDPGA 245

>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 4    LSFPPPRRGQNPTPRSSQ--LPRSRNPRGRRGHGEGAPVFP 120
            L+ P P+   +PTP S +  LP   +P  +R HG   PV P
Sbjct: 1232 LTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSP 1272

>COBB_RHOCA (O68108) Cobyrinic acid A,C-diamide synthase|
          Length = 435

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 343 LVFEGGTGAADGPGEDGRRGVGLS 272
           ++FEG  G  DGP + GR G G S
Sbjct: 86  VIFEGAMGLYDGPADPGRSGRGTS 109

>PRR3_PIG (Q767L1) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56) (Fragment)
          Length = 131

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 4   LSFPPPRRGQNPTPRSSQLPRSRNPRGRRGHGEGA-PVFPATG 129
           LS PPP RG+ P  R    PRS  P GR   G  A P FP  G
Sbjct: 17  LSLPPPPRGRGPL-RGGLGPRS-GPYGRGWWGVNAEPPFPGPG 57

>MYSC_ACACA (P10569) Myosin IC heavy chain|
          Length = 1168

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 17/47 (36%), Positives = 18/47 (38%)
 Frame = +1

Query: 1    GLSFPPPRRGQNPTPRSSQLPRSRNPRGRRGHGEGAPVFPATGGLQP 141
            G   PPP  G  P       P     RGR G G   P   A GG+ P
Sbjct: 1110 GRGAPPPGAGGPPGGGRGGAPPPGGMRGRGGPGPAPPGGMARGGMMP 1156

>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome) (Glycoprotein
           p43)
          Length = 391

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 19/42 (45%), Positives = 20/42 (47%)
 Frame = +1

Query: 7   SFPPPRRGQNPTPRSSQLPRSRNPRGRRGHGEGAPVFPATGG 132
           SF   RRG  P PRS   PR    RG RG   G    P+ GG
Sbjct: 88  SFESGRRGPPPPPRSRGPPRGL--RGGRGGSGGTRGPPSRGG 127

>TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16|
          Length = 767

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 40  TPRSSQLPRSRNPRGRRGHGEGAPVFPATGGLQPLHT 150
           TP SS + ++  PRGRR    GA   P+   L+P  T
Sbjct: 99  TPESSPVRKAPRPRGRRTRSSGASHQPSPTELRPTLT 135

>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3259

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 13  PPPRRGQNPTPRSSQLPRSRNPRGRRGHGEG 105
           PPP  G   +   +  PRSR P GR   GEG
Sbjct: 560 PPPPSGAGKSGDETGRPRSRGPVGRTEPGEG 590


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,812,998
Number of Sequences: 219361
Number of extensions: 1089889
Number of successful extensions: 5886
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5863
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)