>YME7_YEAST (Q04705) Hypothetical 41.4 kDa protein in GAL80-PRP39 intergenic|
           region
          Length = 352

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 12/53 (22%), Positives = 32/53 (60%)
 Frame = +2

Query: 296 YCQNHLTGLVLFSWCKLMDPMTLLIASYLMLVVFTKPRLIVQKMLLQGLQIRM 454
           Y ++ +   +LFS+   +  ++ LI S ++ ++F +PR +  K  ++G ++++
Sbjct: 214 YEESVILSFMLFSFIIWVILISKLILSIIIFIIFIRPRFLSSKRKVKGYELKL 266

>THB1_SHEEP (Q28571) Thyroid hormone receptor beta-1 (Fragment)|
          Length = 411

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +1

Query: 355 HDSVDSFISDAGSVYKTKIDSAKNAATGLTDKDELIVIRSDESSG 489
           HD V    + +   ++T+    K       DKDEL V+  D+++G
Sbjct: 70  HDDVSDQSAPSAQAFQTEEKKCKGYIPSYLDKDELCVVCGDKATG 114


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.131    0.358 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,535,065
Number of Sequences: 219361
Number of extensions: 975960
Number of successful extensions: 2225
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2224
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)