Clone Name | bart12f12 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_191581.1| Oryza sativa (japonica cultivar-group), mRNA Length = 648 Score = 208 bits (105), Expect = 1e-50 Identities = 174/197 (88%) Strand = Plus / Plus Query: 325 tccgtcgccccggctccttcgacttcgacggcgcatggttgttcaactacggcatcggca 384 |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 143 tccgccgcccgggctccttcgacttcgacggcgcatggctgttcaactacggcatcggca 202 Query: 385 tccacctgctgcagtcggagcaccccgagagcttaccggcgaagaaggagatcaacccca 444 |||||||||||||| | ||| |||| |||||| | || | || |||||||||||||||| Sbjct: 203 tccacctgctgcaggcagaggacccggagagcatgccacccaataaggagatcaacccca 262 Query: 445 aggataaccacatctctttccagtgcgagagcatggtggctgtcgagcggcggctgaagg 504 |||||||||||||||| ||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 263 aggataaccacatctcattcacgtgcgagagcatggaggcggtgcagcggcggctgaagg 322 Query: 505 agctgggcatccagtac 521 || ||||| ||| |||| Sbjct: 323 agatgggcgtccggtac 339
>dbj|AK119669.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-H06, full insert sequence Length = 1287 Score = 190 bits (96), Expect = 3e-45 Identities = 246/296 (83%) Strand = Plus / Plus Query: 221 gggcagcgtgttgccgctggcgtccctgaaccatatcagcatagtgtgcaggtcagtgga 280 |||||||| | ||||||||||||| |||||||| |||||||| ||||||||||| || | Sbjct: 256 gggcagcgggctgccgctggcgtcgctgaaccacatcagcatcgtgtgcaggtcgttgca 315 Query: 281 ggagtcgctcgacttctacatgaacgtcctcgggttcacccccatccgtcgccccggctc 340 |||||||||| |||||||| ||||| ||||| ||| |||| ||||||||||||| || Sbjct: 316 ggagtcgctcaccttctacaccaacgtgctcggcttcttccccgtccgtcgccccggatc 375 Query: 341 cttcgacttcgacggcgcatggttgttcaactacggcatcggcatccacctgctgcagtc 400 |||||||||||||||||||||| |||| || || || || || ||||| ||||| ||| | Sbjct: 376 cttcgacttcgacggcgcatggctgtttaattatgggattggtatccatctgcttcaggc 435 Query: 401 ggagcaccccgagagcttaccggcgaagaaggagatcaaccccaaggataaccacatctc 460 || | || || ||| | || | ||| | |||||||| || || ||||| |||||||| Sbjct: 436 tgaagatcctgacagcctgccagggaaaacagagatcaatcctaaagataatcacatctc 495 Query: 461 tttccagtgcgagagcatggtggctgtcgagcggcggctgaaggagctgggcatcc 516 |||||||| |||||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 496 cttccagtgtgagagcatggtggcagtggagcggcggctgaaggagctaggcatcc 551
>dbj|AK119584.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-C06, full insert sequence Length = 1296 Score = 182 bits (92), Expect = 8e-43 Identities = 245/296 (82%) Strand = Plus / Plus Query: 221 gggcagcgtgttgccgctggcgtccctgaaccatatcagcatagtgtgcaggtcagtgga 280 |||||||| | ||||||||||||| |||||||| |||||||| ||||||||||| || | Sbjct: 261 gggcagcgggctgccgctggcgtcgctgaaccacatcagcatcgtgtgcaggtcgttgca 320 Query: 281 ggagtcgctcgacttctacatgaacgtcctcgggttcacccccatccgtcgccccggctc 340 |||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||| || Sbjct: 321 ggagtcgctcaccttctacaccgacgtgctcggcttcttccccgtccgtcgccccggatc 380 Query: 341 cttcgacttcgacggcgcatggttgttcaactacggcatcggcatccacctgctgcagtc 400 |||||||||||||||||||||| |||| || || || || || ||||| ||||| ||| | Sbjct: 381 cttcgacttcgacggcgcatggctgtttaattatgggattggtatccatctgcttcaggc 440 Query: 401 ggagcaccccgagagcttaccggcgaagaaggagatcaaccccaaggataaccacatctc 460 || | || || ||| | || | ||| | |||||||| || || ||||| |||||||| Sbjct: 441 tgaagatcctgacagcctgccagggaaaacagagatcaatcctaaagataatcacatctc 500 Query: 461 tttccagtgcgagagcatggtggctgtcgagcggcggctgaaggagctgggcatcc 516 |||||||| |||||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 501 cttccagtgtgagagcatggtggcagtggagcggcggctgaaggagctaggcatcc 556
>dbj|AK069814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031G07, full insert sequence Length = 1296 Score = 182 bits (92), Expect = 8e-43 Identities = 245/296 (82%) Strand = Plus / Plus Query: 221 gggcagcgtgttgccgctggcgtccctgaaccatatcagcatagtgtgcaggtcagtgga 280 |||||||| | ||||||||||||| |||||||| |||||||| ||||||||||| || | Sbjct: 257 gggcagcgggctgccgctggcgtcgctgaaccacatcagcatcgtgtgcaggtcgttgca 316 Query: 281 ggagtcgctcgacttctacatgaacgtcctcgggttcacccccatccgtcgccccggctc 340 |||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||| || Sbjct: 317 ggagtcgctcaccttctacaccgacgtgctcggcttcttccccgtccgtcgccccggatc 376 Query: 341 cttcgacttcgacggcgcatggttgttcaactacggcatcggcatccacctgctgcagtc 400 |||||||||||||||||||||| |||| || || || || || ||||| ||||| ||| | Sbjct: 377 cttcgacttcgacggcgcatggctgtttaattatgggattggtatccatctgcttcaggc 436 Query: 401 ggagcaccccgagagcttaccggcgaagaaggagatcaaccccaaggataaccacatctc 460 || | || || ||| | || | ||| | |||||||| || || ||||| |||||||| Sbjct: 437 tgaagatcctgacagcctgccagggaaaacagagatcaatcctaaagataatcacatctc 496 Query: 461 tttccagtgcgagagcatggtggctgtcgagcggcggctgaaggagctgggcatcc 516 |||||||| |||||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 497 cttccagtgtgagagcatggtggcagtggagcggcggctgaaggagctaggcatcc 552
>dbj|AK106348.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-H07, full insert sequence Length = 1335 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 221 gggcagcgtgttgccgctggcgtccctgaaccatatcagcatagtgtgcaggtcagtgga 280 |||||||| | ||||||||||||| |||||||| |||||||| ||||||||||| || | Sbjct: 256 gggcagcgggctgccgctggcgtcgctgaaccacatcagcatcgtgtgcaggtcgttgca 315 Query: 281 ggagtcgctcgacttctacatgaacgtcctcgggttcacccccatccgtcgccccggctc 340 |||||||||| |||||||| |||| ||||| ||| ||||| ||||||||||||| || Sbjct: 316 ggagtcgctcaccttctacaccgacgtgctcggcttctcccccgtccgtcgccccggatc 375 Query: 341 cttcgacttcgacggcgcatgg 362 |||||||||||||||||||||| Sbjct: 376 cttcgacttcgacggcgcatgg 397
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 133 bits (67), Expect = 6e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 221 gggcagcgtgttgccgctggcgtccctgaaccatatcagcatagtgtgcaggtcagtgga 280 |||||||| | ||||||||||||| |||||||| |||||||| ||||||||||| || | Sbjct: 129225 gggcagcgggctgccgctggcgtcgctgaaccacatcagcatcgtgtgcaggtcgttgca 129284 Query: 281 ggagtcgctcgacttctacatgaacgtcctcgggttcacccccatccgtcgccccggctc 340 |||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||| || Sbjct: 129285 ggagtcgctcaccttctacaccgacgtgctcggcttcttccccgtccgtcgccccggatc 129344 Query: 341 cttcgacttcgacggcgcatggt 363 ||||||||||||||||||||||| Sbjct: 129345 cttcgacttcgacggcgcatggt 129367 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 465 cagtgcgagagcatggtggctgtcgagcggcggctgaaggagctgggcatcc 516 ||||| |||||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 132655 cagtgtgagagcatggtggcagtggagcggcggctgaaggagctaggcatcc 132706
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 133 bits (67), Expect = 6e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 221 gggcagcgtgttgccgctggcgtccctgaaccatatcagcatagtgtgcaggtcagtgga 280 |||||||| | ||||||||||||| |||||||| |||||||| ||||||||||| || | Sbjct: 4242746 gggcagcgggctgccgctggcgtcgctgaaccacatcagcatcgtgtgcaggtcgttgca 4242805 Query: 281 ggagtcgctcgacttctacatgaacgtcctcgggttcacccccatccgtcgccccggctc 340 |||||||||| |||||||| |||| ||||| ||| |||| ||||||||||||| || Sbjct: 4242806 ggagtcgctcaccttctacaccgacgtgctcggcttcttccccgtccgtcgccccggatc 4242865 Query: 341 cttcgacttcgacggcgcatggt 363 ||||||||||||||||||||||| Sbjct: 4242866 cttcgacttcgacggcgcatggt 4242888 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 465 cagtgcgagagcatggtggctgtcgagcggcggctgaaggagctgggcatcc 516 ||||| |||||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 4246176 cagtgtgagagcatggtggcagtggagcggcggctgaaggagctaggcatcc 4246227
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 364 tgttcaactacggcatcggcatccacctgctgcagtcggagcaccccgagagcttaccgg 423 ||||||||||||||||||||||||||||||||||| | ||| |||| |||||| | || Sbjct: 3779438 tgttcaactacggcatcggcatccacctgctgcaggcagaggacccggagagcatgccac 3779497 Query: 424 cgaagaaggagatcaaccccaaggataaccacatctc 460 | || |||||||||||||||||||||||||||||||| Sbjct: 3779498 ccaataaggagatcaaccccaaggataaccacatctc 3779534 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 325 tccgtcgccccggctccttcgacttcgacggcgcatggt 363 |||| ||||| |||||||||||||||||||||||||||| Sbjct: 3779033 tccgccgcccgggctccttcgacttcgacggcgcatggt 3779071 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 465 cagtgcgagagcatggtggctgtcgagcggcggctgaaggagctgggcatccagtac 521 |||||||||||||||| ||| || ||||||||||||||||| ||||| ||| |||| Sbjct: 3780523 cagtgcgagagcatggaggcggtgcagcggcggctgaaggagatgggcgtccggtac 3780579
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 364 tgttcaactacggcatcggcatccacctgctgcagtcggagcaccccgagagcttaccgg 423 ||||||||||||||||||||||||||||||||||| | ||| |||| |||||| | || Sbjct: 52980 tgttcaactacggcatcggcatccacctgctgcaggcagaggacccggagagcatgccac 53039 Query: 424 cgaagaaggagatcaaccccaaggataaccacatctc 460 | || |||||||||||||||||||||||||||||||| Sbjct: 53040 ccaataaggagatcaaccccaaggataaccacatctc 53076 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 325 tccgtcgccccggctccttcgacttcgacggcgcatggt 363 |||| ||||| |||||||||||||||||||||||||||| Sbjct: 52575 tccgccgcccgggctccttcgacttcgacggcgcatggt 52613 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 465 cagtgcgagagcatggtggctgtcgagcggcggctgaaggagctgggcatccagtac 521 |||||||||||||||| ||| || ||||||||||||||||| ||||| ||| |||| Sbjct: 54065 cagtgcgagagcatggaggcggtgcagcggcggctgaaggagatgggcgtccggtac 54121
>gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0672D07, complete sequence Length = 136465 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 465 cagtgcgagagcatggtggctgtcgagcggcggctgaaggagctgggcatcc 516 ||||| |||||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 783 cagtgtgagagcatggtggcagtggagcggcggctgaaggagctaggcatcc 834
>dbj|AK067512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109G08, full insert sequence Length = 4262 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 465 cagtgcgagagcatggtggctgtcgagcggcggctgaaggagctgggcatcc 516 ||||| |||||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 4156 cagtgtgagagcatggtggcagtggagcggcggctgaaggagctaggcatcc 4105
>ref|NM_197293.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0091N21.37), mRNA Length = 375 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 364 tgttcaactacggcatcggcatccacctgctgcag 398 ||||||||||||||||||||||||||||||||||| Sbjct: 194 tgttcaactacggcatcggcatccacctgctgcag 228
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 364 tgttcaactacggcatcggcatccacctgctgcag 398 ||||||||||||||||||||||||||||||||||| Sbjct: 17015 tgttcaactacggcatcggcatccacctgctgcag 17049 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 334 ccggctccttcgacttcgacggcgcatggt 363 ||||||||||| ||||||||||| |||||| Sbjct: 16832 ccggctccttcaacttcgacggcacatggt 16861
>gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 genomic sequence, complete sequence Length = 113606 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 364 tgttcaactacggcatcggcatccacctgctgcag 398 ||||||||||||||||||||||||||||||||||| Sbjct: 14198 tgttcaactacggcatcggcatccacctgctgcag 14164 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 334 ccggctccttcgacttcgacggcgcatggt 363 ||||||||||| ||||||||||| |||||| Sbjct: 14381 ccggctccttcaacttcgacggcacatggt 14352
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 364 tgttcaactacggcatcggcatccacctgctgcag 398 ||||||||||||||||||||||||||||||||||| Sbjct: 19061649 tgttcaactacggcatcggcatccacctgctgcag 19061615 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 334 ccggctccttcgacttcgacggcgcatggt 363 ||||||||||| ||||||||||| |||||| Sbjct: 19061832 ccggctccttcaacttcgacggcacatggt 19061803
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 222 ggcagcgtgttgccgctggcgtccctgaaccatatcagcatagtgtgcaggtcagtggag 281 ||||||| | ||||||||||||| |||||||| |||||||| ||||||||||| || || Sbjct: 12879437 ggcagcgggctgccgctggcgtcgctgaaccacatcagcatcgtgtgcaggtcgttgcag 12879496 Query: 282 gagtcgctcgacttctaca 300 |||||||| |||||||| Sbjct: 12879497 tagtcgctcaccttctaca 12879515
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 222 ggcagcgtgttgccgctggcgtccctgaaccatatcagcatagtgtgcaggtcagtggag 281 ||||||| | ||||||||||||| |||||||| |||||||| ||||||||||| || || Sbjct: 98919 ggcagcgggctgccgctggcgtcgctgaaccacatcagcatcgtgtgcaggtcgttgcag 98978 Query: 282 gagtcgctcgacttctaca 300 |||||||| |||||||| Sbjct: 98979 tagtcgctcaccttctaca 98997
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 364 tgttcaactacggcatcggcatccacctgctgcag 398 ||||||||||||||||||||||||||||||||||| Sbjct: 19072903 tgttcaactacggcatcggcatccacctgctgcag 19072869 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 334 ccggctccttcgacttcgacggcgcatggt 363 ||||||||||| ||||||||||| |||||| Sbjct: 19073086 ccggctccttcaacttcgacggcacatggt 19073057
>ref|NM_106665.2| Arabidopsis thaliana lactoylglutathione lyase AT1G80160 mRNA, complete cds Length = 862 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 432 gagatcaaccccaaggataaccacatctctttccagtgcgagagcatgg 480 ||||| || ||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 324 gagattaatcccaaggataatcacatttctttccagtgcgaaagcatgg 372
>gb|AY070762.1| Arabidopsis thaliana At1g80160/F18B13_24 mRNA sequence Length = 834 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 432 gagatcaaccccaaggataaccacatctctttccagtgcgagagcatgg 480 ||||| || ||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 422 gagattaatcccaaggataatcacatttctttccagtgcgaaagcatgg 470
>emb|BX817721.1|CNS0AE5Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZG12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 666 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 432 gagatcaaccccaaggataaccacatctctttccagtgcgagagcatgg 480 ||||| || ||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 250 gagattaatcccaaggataatcacatttctttccagtgcgaaagcatgg 298
>emb|BX817594.1|CNS0AE3E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZG12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 671 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 432 gagatcaaccccaaggataaccacatctctttccagtgcgagagcatgg 480 ||||| || ||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 295 gagattaatcccaaggataatcacatttctttccagtgcgaaagcatgg 343
>gb|AY086126.1| Arabidopsis thaliana clone 21663 mRNA, complete sequence Length = 800 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 432 gagatcaaccccaaggataaccacatctctttccagtgcgagagcatgg 480 ||||| || ||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 321 gagattaatcccaaggataatcacatttctttccagtgcgaaagcatgg 369
>ref|NM_001035972.1| Arabidopsis thaliana lactoylglutathione lyase AT1G15380 transcript variant AT1G15380.2 mRNA, complete cds Length = 863 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 441 cccaaggataaccacatctctttccagtgcgagagcatgg 480 ||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 326 cccaaggataatcacatctctttccagtgtgagagtatgg 365
>ref|NM_101407.2| Arabidopsis thaliana lactoylglutathione lyase AT1G15380 transcript variant AT1G15380.1 mRNA, complete cds Length = 915 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 441 cccaaggataaccacatctctttccagtgcgagagcatgg 480 ||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 445 cccaaggataatcacatctctttccagtgtgagagtatgg 484
>gb|AY114619.1| Arabidopsis thaliana unknown protein (At1g15380) mRNA, complete cds Length = 586 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 441 cccaaggataaccacatctctttccagtgcgagagcatgg 480 ||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 235 cccaaggataatcacatctctttccagtgtgagagtatgg 274
>gb|AY072377.1| Arabidopsis thaliana unknown protein (At1g15380) mRNA, complete cds Length = 914 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 441 cccaaggataaccacatctctttccagtgcgagagcatgg 480 ||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 443 cccaaggataatcacatctctttccagtgtgagagtatgg 482
>gb|AY088300.1| Arabidopsis thaliana clone 5364 mRNA, complete sequence Length = 812 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 441 cccaaggataaccacatctctttccagtgcgagagcatgg 480 ||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 356 cccaaggataatcacatctctttccagtgtgagagtatgg 395
>gb|AY110792.1| Zea mays CL22616_1 mRNA sequence Length = 849 Score = 50.1 bits (25), Expect = 0.007 Identities = 47/55 (85%) Strand = Plus / Plus Query: 467 gtgcgagagcatggtggctgtcgagcggcggctgaaggagctgggcatccagtac 521 ||||||||||||||| || | ||||||||||||| |||| | ||||||| |||| Sbjct: 260 gtgcgagagcatggtagcggnggagcggcggctganggagatcggcatcccgtac 314
>ref|NM_128402.2| Arabidopsis thaliana lactoylglutathione lyase AT2G28420 mRNA, complete cds Length = 869 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 446 ggataaccacatctctttccagtg 469 |||||||||||||||||||||||| Sbjct: 287 ggataaccacatctctttccagtg 310 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 342 ttcgacttcgacggcgcatggttgttcaactacggcatcggcatccacctgctgcag 398 |||||||||||||| || ||| | |||||||||||| | || |||||| || ||||| Sbjct: 180 ttcgacttcgacggtgcgtggcttttcaactacggcgttgggatccacttggtgcag 236
>gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map mi54, complete sequence Length = 93122 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 446 ggataaccacatctctttccagtg 469 |||||||||||||||||||||||| Sbjct: 12298 ggataaccacatctctttccagtg 12275 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 342 ttcgacttcgacggcgcatggttgttcaactacggcatcggcatccacctgctgcag 398 |||||||||||||| || ||| | |||||||||||| | || |||||| || ||||| Sbjct: 12405 ttcgacttcgacggtgcgtggcttttcaactacggcgttgggatccacttggtgcag 12349
>gb|AY060516.1| Arabidopsis thaliana At2g28420/T1B3.6 mRNA, complete cds Length = 555 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 446 ggataaccacatctctttccagtg 469 |||||||||||||||||||||||| Sbjct: 264 ggataaccacatctctttccagtg 287 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 342 ttcgacttcgacggcgcatggttgttcaactacggcatcggcatccacctgctgcag 398 |||||||||||||| || ||| | |||||||||||| | || |||||| || ||||| Sbjct: 157 ttcgacttcgacggtgcgtggcttttcaactacggcgttgggatccacttggtgcag 213
>gb|AY052254.1| Arabidopsis thaliana At2g28420/T1B3.6 mRNA, complete cds Length = 870 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 446 ggataaccacatctctttccagtg 469 |||||||||||||||||||||||| Sbjct: 287 ggataaccacatctctttccagtg 310 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 342 ttcgacttcgacggcgcatggttgttcaactacggcatcggcatccacctgctgcag 398 |||||||||||||| || ||| | |||||||||||| | || |||||| || ||||| Sbjct: 180 ttcgacttcgacggtgcgtggcttttcaactacggcgttgggatccacttggtgcag 236
>emb|BX842062.1|CNS09Y9H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL21ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 766 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 446 ggataaccacatctctttccagt 468 ||||||||||||||||||||||| Sbjct: 275 ggataaccacatctctttccagt 297
>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence Length = 141984 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 441 cccaaggataaccacatctctttccag 467 ||||||||||| ||||||||||||||| Sbjct: 106824 cccaaggataatcacatctctttccag 106850
>gb|AC003683.2| Homo sapiens x BAC RP1-147H15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127683 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 cagtttgtgtttgcttttctct 78 |||||||||||||||||||||| Sbjct: 67697 cagtttgtgtttgcttttctct 67718
>gb|AC134051.3| Homo sapiens chromosome 3 clone RP11-705F24, complete sequence Length = 85615 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 gagtgaagcagcagccattgc 34 ||||||||||||||||||||| Sbjct: 30798 gagtgaagcagcagccattgc 30818
>gb|AC007645.4|AC007645 Drosophila melanogaster, chromosome 3R, region 86C-86D, BAC clone BACR04L09, complete sequence Length = 165136 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 tggtcagcagcggcggcaagg 222 ||||||||||||||||||||| Sbjct: 96887 tggtcagcagcggcggcaagg 96907
>ref|XM_552581.1| Anopheles gambiae str. PEST ENSANGP00000026542 (ENSANGG00000015476), partial mRNA Length = 1566 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 gtggaggagtcgctcgacttctaca 300 |||||||||||||||||| |||||| Sbjct: 52 gtggaggagtcgctcgacatctaca 76
>ref|XM_320836.2| Anopheles gambiae str. PEST ENSANGP00000017965 (ENSANGG00000015476), partial mRNA Length = 1833 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 gtggaggagtcgctcgacttctaca 300 |||||||||||||||||| |||||| Sbjct: 100 gtggaggagtcgctcgacatctaca 124
>gb|AE003689.2| Drosophila melanogaster chromosome 3R, section 27 of 118 of the complete sequence Length = 215899 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 tggtcagcagcggcggcaagg 222 ||||||||||||||||||||| Sbjct: 189381 tggtcagcagcggcggcaagg 189401
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 cagcgtgttgccgctggcgtccctg 248 ||||||| ||||||||||||||||| Sbjct: 7014369 cagcgtgctgccgctggcgtccctg 7014345
>gb|AC141583.3| Rattus norvegicus 9 BAC CH230-486H15 (Children's Hospital Oakland Research Institute) complete sequence Length = 132946 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gcttttctcttgcttgattggttg 92 ||||||||||| |||||||||||| Sbjct: 10183 gcttttctcttacttgattggttg 10160
>ref|XM_362100.1| Magnaporthe grisea 70-15 hypothetical protein (MG04545.4) partial cds Length = 1095 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cagcagcggcggcaagggca 225 |||||||||||||||||||| Sbjct: 202 cagcagcggcggcaagggca 183
>gb|AC186631.1| Mus musculus chromosome Y clone RP24-297J24, complete sequence Length = 162588 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 155632 tgtttgcttttctcttgctt 155613
>gb|AC147991.4| Mus musculus BAC clone RP24-362D11 from chromosome Y, complete sequence Length = 180675 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 165717 tgtttgcttttctcttgctt 165736
>gb|AC132276.4| Mus musculus BAC clone RP24-344B8 from chromosome Y, complete sequence Length = 168601 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 30923 tgtttgcttttctcttgctt 30904
>ref|XM_592598.2| PREDICTED: Bos taurus hypothetical LOC514704, transcript variant 1 (LOC514704), mRNA Length = 4373 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 490 agcggcggctgaaggagctgggca 513 |||||| ||||||||||||||||| Sbjct: 1149 agcggccgctgaaggagctgggca 1172
>gb|AC145562.5| Mus musculus BAC clone RP24-67L21 from chromosome Y, complete sequence Length = 156048 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 126787 tgtttgcttttctcttgctt 126806 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 49843 tgtttgcttttctcttgctt 49862
>gb|AC145588.3| Mus musculus BAC clone RP24-170B7 from chromosome Y, complete sequence Length = 189141 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 183799 tgtttgcttttctcttgctt 183780
>gb|AC145598.5| Mus musculus BAC clone RP24-324I11 from chromosome Y, complete sequence Length = 225035 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 50704 tgtttgcttttctcttgctt 50723
>gb|AC174382.2| Mus musculus BAC clone RP24-94K20 from chromosome y, complete sequence Length = 207355 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 132614 tgtttgcttttctcttgctt 132633
>gb|AC147109.2| Mus musculus BAC clone RP24-75P8 from chromosome Y, complete sequence Length = 216878 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 162026 tgtttgcttttctcttgctt 162045
>gb|AC147252.4| Mus musculus BAC clone RP24-116A5 from chromosome Y, complete sequence Length = 197602 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 34649 tgtttgcttttctcttgctt 34630
>gb|AC147372.3| Mus musculus BAC clone RP24-212L10 from chromosome Y, complete sequence Length = 187032 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 21587 tgtttgcttttctcttgctt 21568
>gb|AC140239.3| Mus musculus BAC clone RP24-280O4 from chromosome Y, complete sequence Length = 156577 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 820 tgtttgcttttctcttgctt 801
>gb|AC147149.2| Mus musculus BAC clone RP24-248P15 from chromosome Y, complete sequence Length = 144382 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 143399 tgtttgcttttctcttgctt 143418
>gb|AC129210.3| Mus musculus BAC clone RP24-331P3 from chromosome Y, complete sequence Length = 151295 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 147035 tgtttgcttttctcttgctt 147016
>gb|AC144934.3| Mus musculus BAC clone RP24-327C7 from chromosome Y, complete sequence Length = 194335 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 174155 tgtttgcttttctcttgctt 174136
>gb|AC147150.2| Mus musculus BAC clone RP24-386L15 from chromosome Y, complete sequence Length = 171912 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 6652 tgtttgcttttctcttgctt 6633
>gb|AC183415.1| Mus musculus BAC clone RP24-121M4 from chromosome y, complete sequence Length = 188947 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 25933 tgtttgcttttctcttgctt 25914
>gb|AF467774.1| Scophthalmus maximus arginase mRNA, partial cds Length = 404 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 498 ctgaaggagctgggcatccagtac 521 |||||||| ||||||||||||||| Sbjct: 277 ctgaaggacctgggcatccagtac 300
>gb|AC107179.5| Rattus norvegicus 9 BAC CH230-155P21 (Children's Hospital Oakland Research Institute) complete sequence Length = 204235 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gcttttctcttgcttgattggttg 92 ||||||||||| |||||||||||| Sbjct: 136851 gcttttctcttacttgattggttg 136828
>gb|AC144647.3| Mus musculus BAC clone RP24-369F17 from chromosome Y, complete sequence Length = 199733 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 157852 tgtttgcttttctcttgctt 157833
>gb|AC145292.2| Mus musculus BAC clone RP24-84H20 from chromosome Y, complete sequence Length = 203944 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 162085 tgtttgcttttctcttgctt 162066
>gb|AC145302.4| Mus musculus BAC clone RP24-89K13 from chromosome Y, complete sequence Length = 168641 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 4926 tgtttgcttttctcttgctt 4945
>gb|AC147113.2| Mus musculus BAC clone RP24-120I13 from chromosome Y, complete sequence Length = 196099 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 25400 tgtttgcttttctcttgctt 25381
>gb|AC133178.3| Mus musculus BAC clone RP24-123P23 from chromosome Y, complete sequence Length = 158872 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 57094 tgtttgcttttctcttgctt 57075
>gb|AC140493.3| Mus musculus BAC clone RP24-137I9 from chromosome Y, complete sequence Length = 150186 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 105426 tgtttgcttttctcttgctt 105445
>gb|AC144856.2| Mus musculus BAC clone RP24-185C22 from chromosome Y, complete sequence Length = 163609 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 4906 tgtttgcttttctcttgctt 4925
>gb|AC134567.4| Mus musculus BAC clone RP24-199C24 from chromosome Y, complete sequence Length = 163892 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 128075 tgtttgcttttctcttgctt 128094
>gb|AC131188.4| Mus musculus BAC clone RP24-272N18 from chromosome Y, complete sequence Length = 161415 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 9822 tgtttgcttttctcttgctt 9841
>gb|AC140473.3| Mus musculus BAC clone RP24-405H7 from chromosome Y, complete sequence Length = 133519 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 105561 tgtttgcttttctcttgctt 105580
>gb|AC136975.2| Mus musculus BAC clone RP24-403M20 from chromosome Y, complete sequence Length = 189490 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 116971 tgtttgcttttctcttgctt 116952
>gb|AC133082.3| Mus musculus BAC clone RP24-298C1 from chromosome Y, complete sequence Length = 152853 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 19544 tgtttgcttttctcttgctt 19563
>gb|AC144851.3| Mus musculus BAC clone RP24-329H15 from chromosome Y, complete sequence Length = 171646 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 33463 tgtttgcttttctcttgctt 33482
>gb|AC147156.2| Mus musculus BAC clone RP24-343M19 from chromosome Y, complete sequence Length = 214399 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 165277 tgtttgcttttctcttgctt 165296
>emb|CT005239.3| Pan troglodytes chromosome X clone PTB-125H24 map Xq28, complete sequence Length = 262483 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttgtgtttgcttttctcttgctt 83 |||||||||| ||||||||||||| Sbjct: 118767 tttgtgtttggttttctcttgctt 118744
>gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, complete sequence Length = 190626 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tcggagcaccccgagagctt 418 |||||||||||||||||||| Sbjct: 102684 tcggagcaccccgagagctt 102703
>gb|AC131649.2| Homo sapiens chromosome 16 clone RP11-609N14, complete sequence Length = 182518 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttgtgtttgcttttctcttgctt 83 |||||||||||||| ||||||||| Sbjct: 82685 tttgtgtttgctttgctcttgctt 82662
>gb|AC096582.1| Homo sapiens BAC clone RP11-638I8 from 7, complete sequence Length = 132122 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tcggagcaccccgagagctt 418 |||||||||||||||||||| Sbjct: 78928 tcggagcaccccgagagctt 78947
>gb|AC114575.8| Mus musculus chromosome 12, clone RP23-152I9, complete sequence Length = 193164 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 tatcagcatagtgtgcaggt 273 |||||||||||||||||||| Sbjct: 157310 tatcagcatagtgtgcaggt 157291
>gb|AC140951.1| Pan troglodytes BAC clone RP43-60K3 from 7, complete sequence Length = 165269 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tcggagcaccccgagagctt 418 |||||||||||||||||||| Sbjct: 48603 tcggagcaccccgagagctt 48622
>emb|AL391139.19| Human DNA sequence from clone RP11-353K22 on chromosome X Contains the gene for a novel GTPase and two CpG islands, complete sequence Length = 128899 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttgtgtttgcttttctcttgctt 83 |||||||||| ||||||||||||| Sbjct: 86209 tttgtgtttggttttctcttgctt 86232
>emb|AL031387.4|HS596C15 Human DNA sequence from clone RP4-596C15 on chromosome Xq23 Contains the NXT2 gene for nuclear transport factor 2-like export factor 2 and the GUCY2F gene for guanylate cyclase 2F, retinal, complete sequence Length = 178863 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttgtgtttgcttttctcttgctt 83 |||||||||||||| ||||||||| Sbjct: 33262 tttgtgtttgctttgctcttgctt 33285
>gb|AC182483.3| Mus musculus BAC clone RP24-458L18 from chromosome y, complete sequence Length = 132653 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 59910 tgtttgcttttctcttgctt 59891
>gb|AC184108.1| Mus musculus chromosome UNK clone CH26-73N11, complete sequence Length = 204663 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 17032 tgtttgcttttctcttgctt 17051
>gb|AC181981.2| Mus musculus BAC clone RP24-56E16 from chromosome y, complete sequence Length = 212637 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 65489 tgtttgcttttctcttgctt 65470
>gb|AC087558.13| Mus musculus strain C57BL/6J chromosome 2 clone rp23-282p18, complete sequence Length = 217766 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cagcatagtgtgcaggtcag 276 |||||||||||||||||||| Sbjct: 205795 cagcatagtgtgcaggtcag 205776
>gb|AC069431.13| Homo sapiens 3 BAC RP11-225N10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123742 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttttctcttgcttgattggt 90 |||||||||||||||||||| Sbjct: 53098 ttttctcttgcttgattggt 53117
>gb|AC177805.2| Mus musculus BAC clone RP24-82J12 from chromosome y, complete sequence Length = 205800 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 78107 tgtttgcttttctcttgctt 78126
>gb|AC175387.3| Mus musculus BAC clone RP24-166B21 from chromosome y, complete sequence Length = 163736 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 124631 tgtttgcttttctcttgctt 124612
>gb|AC182449.4| Mus musculus BAC clone RP24-361G20 from chromosome y, complete sequence Length = 156599 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 106200 tgtttgcttttctcttgctt 106219
>gb|AC175056.3| Mus musculus BAC clone RP24-212M24 from chromosome y, complete sequence Length = 166788 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 142619 tgtttgcttttctcttgctt 142638
>gb|AC183526.2| Mus musculus BAC clone RP24-121M8 from chromosome y, complete sequence Length = 175230 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 120837 tgtttgcttttctcttgctt 120856
>gb|AC182038.2| Mus musculus BAC clone RP24-95H15 from chromosome y, complete sequence Length = 183498 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 38368 tgtttgcttttctcttgctt 38387
>gb|AC148834.3| Pan troglodytes BAC clone CH251-4D23 from chromosome 7, complete sequence Length = 192312 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tcggagcaccccgagagctt 418 |||||||||||||||||||| Sbjct: 78333 tcggagcaccccgagagctt 78352
>gb|AC173705.5| Mus musculus BAC clone RP24-244N11 from chromosome y, complete sequence Length = 157985 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 65028 tgtttgcttttctcttgctt 65047
>gb|AC177798.3| Mus musculus BAC clone RP24-456H11 from chromosome y, complete sequence Length = 171533 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 93720 tgtttgcttttctcttgctt 93739
>gb|AC182763.2| Mus musculus BAC clone RP24-56N19 from chromosome y, complete sequence Length = 175755 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 117499 tgtttgcttttctcttgctt 117518
>gb|AC182426.3| Mus musculus BAC clone RP24-81E19 from chromosome y, complete sequence Length = 219905 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 68402 tgtttgcttttctcttgctt 68383
>gb|AC175671.2| Mus musculus BAC clone RP24-313O14 from chromosome y, complete sequence Length = 176687 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 136605 tgtttgcttttctcttgctt 136624
>gb|AC177800.3| Mus musculus BAC clone RP24-323K10 from chromosome y, complete sequence Length = 168735 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 54423 tgtttgcttttctcttgctt 54404
>gb|AC179923.2| Mus musculus BAC clone RP24-358L1 from chromosome y, complete sequence Length = 148977 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 139483 tgtttgcttttctcttgctt 139464
>gb|AC183416.2| Mus musculus BAC clone RP24-68E17 from chromosome y, complete sequence Length = 177325 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 129095 tgtttgcttttctcttgctt 129076
>gb|AC182555.2| Mus musculus BAC clone RP24-89D11 from chromosome y, complete sequence Length = 257364 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 74473 tgtttgcttttctcttgctt 74492
>gb|AC175491.3| Mus musculus BAC clone RP24-90O21 from chromosome y, complete sequence Length = 202657 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 85831 tgtttgcttttctcttgctt 85850
>gb|AC175120.3| Mus musculus BAC clone RP24-26J9 from chromosome y, complete sequence Length = 212433 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 162934 tgtttgcttttctcttgctt 162953
>gb|AC175526.4| Mus musculus BAC clone RP24-84E22 from chromosome y, complete sequence Length = 206636 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 36764 tgtttgcttttctcttgctt 36745
>gb|AC148300.3| Pan troglodytes BAC clone CH251-64B13 from chromosome 7, complete sequence Length = 173568 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tcggagcaccccgagagctt 418 |||||||||||||||||||| Sbjct: 102977 tcggagcaccccgagagctt 102996
>gb|AC068633.13| Homo sapiens 3 BAC RP11-155B15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161735 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttgtgtttgcttttctcttgctt 83 |||||||||| ||||||||||||| Sbjct: 45378 tttgtgtttgattttctcttgctt 45355
>gb|AC182389.2| Mus musculus BAC clone RP24-399J2 from chromosome y, complete sequence Length = 166805 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 133521 tgtttgcttttctcttgctt 133540
>gb|AC182254.2| Mus musculus BAC clone RP24-66O22 from chromosome y, complete sequence Length = 175381 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 137341 tgtttgcttttctcttgctt 137360
>gb|AC175462.3| Mus musculus BAC clone RP24-24E12 from chromosome y, complete sequence Length = 202215 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 129307 tgtttgcttttctcttgctt 129288
>gb|AC174475.4| Mus musculus BAC clone RP24-169K6 from chromosome y, complete sequence Length = 199928 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 70319 tgtttgcttttctcttgctt 70338
>gb|AC147264.5| Mus musculus BAC clone RP24-225P12 from chromosome y, complete sequence Length = 178650 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 15562 tgtttgcttttctcttgctt 15543
>gb|AC182230.1| Mus musculus BAC clone RP24-72K10 from chromosome y, complete sequence Length = 164341 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 87562 tgtttgcttttctcttgctt 87543
>gb|AC175662.3| Mus musculus BAC clone RP24-425D4 from chromosome y, complete sequence Length = 188505 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 54383 tgtttgcttttctcttgctt 54364
>dbj|AK015964.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930534I15 product:unclassifiable, full insert sequence Length = 1324 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cagcatagtgtgcaggtcag 276 |||||||||||||||||||| Sbjct: 604 cagcatagtgtgcaggtcag 585
>gb|AC175391.3| Mus musculus BAC clone RP24-92G16 from chromosome y, complete sequence Length = 239400 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 25066 tgtttgcttttctcttgctt 25085
>gb|AC175672.2| Mus musculus BAC clone RP24-254K21 from chromosome y, complete sequence Length = 189044 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 18571 tgtttgcttttctcttgctt 18590
>gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L3, complete sequence Length = 150856 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 tcggagcaccccgagagctt 418 |||||||||||||||||||| Sbjct: 108340 tcggagcaccccgagagctt 108321
>gb|AC175709.2| Mus musculus BAC clone RP24-7D4 from chromosome y, complete sequence Length = 160976 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 55552 tgtttgcttttctcttgctt 55571
>gb|AC175460.3| Mus musculus BAC clone RP24-48K24 from chromosome y, complete sequence Length = 184160 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 7815 tgtttgcttttctcttgctt 7796
>gb|AC175384.2| Mus musculus BAC clone RP24-168P1 from chromosome y, complete sequence Length = 183854 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 132422 tgtttgcttttctcttgctt 132403
>gb|AC093576.3| Homo sapiens chromosome 1 clone RP11-359C24, complete sequence Length = 185461 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tttctcttgcttgattggtt 91 |||||||||||||||||||| Sbjct: 5077 tttctcttgcttgattggtt 5096
>gb|AC175748.1| Mus musculus chromosome Y clone RP24-269D6, complete sequence Length = 145592 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 101168 tgtttgcttttctcttgctt 101149
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 tcagcagcggcggcaagggcagcg 228 |||||||||||||||| ||||||| Sbjct: 2507959 tcagcagcggcggcaacggcagcg 2507936
>gb|AC145691.5| Mus musculus chromosome 1, clone RP24-278B15, complete sequence Length = 164151 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gcttttctcttgcttgattggttg 92 ||||||||||| |||||||||||| Sbjct: 81234 gcttttctcttacttgattggttg 81257
>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete sequence Length = 116905 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 432 gagatcaaccccaaggataaccacatctctttccag 467 ||||| || ||||||||||| ||||| ||||||||| Sbjct: 88190 gagattaatcccaaggataatcacatttctttccag 88225
>dbj|AP001686.1| Homo sapiens genomic DNA, chromosome 21q, section 30/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtgtttgcttttctcttgct 82 |||||||||||||||||||| Sbjct: 61904 gtgtttgcttttctcttgct 61923
>gb|AC166124.4| Mus musculus chromosome 1, clone RP23-105N9, complete sequence Length = 226615 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gcttttctcttgcttgattggttg 92 ||||||||||| |||||||||||| Sbjct: 5579 gcttttctcttacttgattggttg 5602
>gb|AC140215.2| Mus musculus BAC clone RP24-268F7 from Y, complete sequence Length = 151794 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 53151 tgtttgcttttctcttgctt 53170
>gb|AC137982.3| Mus musculus BAC clone RP24-313G24 from Y, complete sequence Length = 179304 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 127989 tgtttgcttttctcttgctt 128008
>gb|AC142269.4| Mus musculus BAC clone RP24-112B7 from Y, complete sequence Length = 185622 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 179216 tgtttgcttttctcttgctt 179197
>gb|AC147183.3| Mus musculus BAC clone RP24-373J6 from Y, complete sequence Length = 153001 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 113030 tgtttgcttttctcttgctt 113049
>gb|AC147249.3| Mus musculus BAC clone RP24-85J13 from Y, complete sequence Length = 197408 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtttgcttttctcttgctt 83 |||||||||||||||||||| Sbjct: 110600 tgtttgcttttctcttgctt 110581
>emb|AL845257.2| Mouse DNA sequence from clone RP23-280K4 on chromosome 2, complete sequence Length = 169281 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cagcatagtgtgcaggtcag 276 |||||||||||||||||||| Sbjct: 10064 cagcatagtgtgcaggtcag 10045
>dbj|AP000949.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B606F19, LL56-APP region, complete sequence Length = 146670 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtgtttgcttttctcttgct 82 |||||||||||||||||||| Sbjct: 64718 gtgtttgcttttctcttgct 64737 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,460,757 Number of Sequences: 3902068 Number of extensions: 4460757 Number of successful extensions: 93529 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92865 Number of HSP's gapped (non-prelim): 661 length of query: 533 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 510 effective length of database: 17,143,297,704 effective search space: 8743081829040 effective search space used: 8743081829040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)