ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart12f05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472835.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 792 Score = 168 bits (85), Expect = 1e-38 Identities = 124/137 (90%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcgccacgtcgagctcgccgagctgctctccctagccg 239 |||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 104 cccccgcgccggcgccggcgccgcgccacgtcgacctcgccgagctgctctccctcgccg 163 Query: 240 ggccttacggaaagttcctggagtacctcaccaagaccgacgtgatcaagacgtttcaga 299 |||| ||||| | |||||||| |||||||||||||| | |||||||| |||||| |||| Sbjct: 164 ggccgtacggcacgttcctgggctacctcaccaagacgggcgtgatcacgacgttccaga 223 Query: 300 gccaggccaacgacacc 316 ||||||||||||||||| Sbjct: 224 gccaggccaacgacacc 240 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 379 gctgtccaacctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccag 438 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| | Sbjct: 315 gctgtccaacctcaccgccgaccagctccgcacgctcatgctgtgccacggggtgccccg 374 Query: 439 gtactaccagctctcggccttctccgcgctggcggcggcgagcccggtgtccatgttcgc 498 |||| ||| ||||||| | ||||| |||||||| ||| || |||||| | ||| |||||| Sbjct: 375 gtaccacccgctctcgtcgttctcggcgctggccgcgtcgggcccggcgcccacgttcgc 434
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 168 bits (85), Expect = 1e-38 Identities = 124/137 (90%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgcgccacgtcgagctcgccgagctgctctccctagccg 239 |||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 18543 cccccgcgccggcgccggcgccgcgccacgtcgacctcgccgagctgctctccctcgccg 18484 Query: 240 ggccttacggaaagttcctggagtacctcaccaagaccgacgtgatcaagacgtttcaga 299 |||| ||||| | |||||||| |||||||||||||| | |||||||| |||||| |||| Sbjct: 18483 ggccgtacggcacgttcctgggctacctcaccaagacgggcgtgatcacgacgttccaga 18424 Query: 300 gccaggccaacgacacc 316 ||||||||||||||||| Sbjct: 18423 gccaggccaacgacacc 18407 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 379 gctgtccaacctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccag 438 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| | Sbjct: 18332 gctgtccaacctcaccgccgaccagctccgcacgctcatgctgtgccacggggtgccccg 18273 Query: 439 gtactaccagctctcggccttctccgcgctggcggcggcgagcccggtgtccatgttcgc 498 |||| ||| ||||||| | ||||| |||||||| ||| || |||||| | ||| |||||| Sbjct: 18272 gtaccacccgctctcgtcgttctcggcgctggccgcgtcgggcccggcgcccacgttcgc 18213
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 168 bits (85), Expect = 1e-38 Identities = 124/137 (90%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgcgccacgtcgagctcgccgagctgctctccctagccg 239 |||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 23575862 cccccgcgccggcgccggcgccgcgccacgtcgacctcgccgagctgctctccctcgccg 23575803 Query: 240 ggccttacggaaagttcctggagtacctcaccaagaccgacgtgatcaagacgtttcaga 299 |||| ||||| | |||||||| |||||||||||||| | |||||||| |||||| |||| Sbjct: 23575802 ggccgtacggcacgttcctgggctacctcaccaagacgggcgtgatcacgacgttccaga 23575743 Query: 300 gccaggccaacgacacc 316 ||||||||||||||||| Sbjct: 23575742 gccaggccaacgacacc 23575726 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 379 gctgtccaacctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccag 438 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| | Sbjct: 23575651 gctgtccaacctcaccgccgaccagctccgcacgctcatgctgtgccacggggtgccccg 23575592 Query: 439 gtactaccagctctcggccttctccgcgctggcggcggcgagcccggtgtccatgttcgc 498 |||| ||| ||||||| | ||||| |||||||| ||| || |||||| | ||| |||||| Sbjct: 23575591 gtaccacccgctctcgtcgttctcggcgctggccgcgtcgggcccggcgcccacgttcgc 23575532 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 22400336 ccggcgccggcgccggcccc 22400317
>dbj|AK110545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B08, full insert sequence Length = 1166 Score = 168 bits (85), Expect = 1e-38 Identities = 124/137 (90%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcgccacgtcgagctcgccgagctgctctccctagccg 239 |||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 176 cccccgcgccggcgccggcgccgcgccacgtcgacctcgccgagctgctctccctcgccg 235 Query: 240 ggccttacggaaagttcctggagtacctcaccaagaccgacgtgatcaagacgtttcaga 299 |||| ||||| | |||||||| |||||||||||||| | |||||||| |||||| |||| Sbjct: 236 ggccgtacggcacgttcctgggctacctcaccaagacgggcgtgatcacgacgttccaga 295 Query: 300 gccaggccaacgacacc 316 ||||||||||||||||| Sbjct: 296 gccaggccaacgacacc 312 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 379 gctgtccaacctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccag 438 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| | Sbjct: 387 gctgtccaacctcaccgccgaccagctccgcacgctcatgctgtgccacggggtgccccg 446 Query: 439 gtactaccagctctcggccttctccgcgctggcggcggcgagcccggtgtccatgttcgc 498 |||| ||| ||||||| | ||||| |||||||| ||| || |||||| | ||| |||||| Sbjct: 447 gtaccacccgctctcgtcgttctcggcgctggccgcgtcgggcccggcgcccacgttcgc 506
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 168 bits (85), Expect = 1e-38 Identities = 124/137 (90%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgcgccacgtcgagctcgccgagctgctctccctagccg 239 |||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 131765 cccccgcgccggcgccggcgccgcgccacgtcgacctcgccgagctgctctccctcgccg 131706 Query: 240 ggccttacggaaagttcctggagtacctcaccaagaccgacgtgatcaagacgtttcaga 299 |||| ||||| | |||||||| |||||||||||||| | |||||||| |||||| |||| Sbjct: 131705 ggccgtacggcacgttcctgggctacctcaccaagacgggcgtgatcacgacgttccaga 131646 Query: 300 gccaggccaacgacacc 316 ||||||||||||||||| Sbjct: 131645 gccaggccaacgacacc 131629 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 379 gctgtccaacctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccag 438 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| | Sbjct: 131554 gctgtccaacctcaccgccgaccagctccgcacgctcatgctgtgccacggggtgccccg 131495 Query: 439 gtactaccagctctcggccttctccgcgctggcggcggcgagcccggtgtccatgttcgc 498 |||| ||| ||||||| | ||||| |||||||| ||| || |||||| | ||| |||||| Sbjct: 131494 gtaccacccgctctcgtcgttctcggcgctggccgcgtcgggcccggcgcccacgttcgc 131435
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggccccgcgccacgtcgagctcgccgagct 225 ||||||||||||||||| |||| | ||||||| ||||||||||| Sbjct: 85531 ccggcgccggcgccggcgccgcactacgtcgacctcgccgagct 85488 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 279 acgtgatcaagacgtttcagagccaggccaacgacaccaagcagggcatcaccgtgttcg 338 |||| ||| ||||||| ||||||||||| ||| | |||||| ||||| ||||| | |||| Sbjct: 85434 acgtcatcgagacgttccagagccaggcgaacaagaccaaggagggcgtcaccatcttcg 85375 Query: 339 cgcctcaagactcggcgttcgccgccctcaacgagaccgtgctgtccaacctcaccgccg 398 || | |||||||||||||||||| |||| || || | ||||||||||||| || Sbjct: 85374 tccccaaggactcggcgttcgccgccatcaagcagtccaccttttccaacctcaccggcg 85315 Query: 399 accagctc 406 |||||||| Sbjct: 85314 accagctc 85307
>dbj|AK068476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151O19, full insert sequence Length = 900 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 279 acgtgatcaagacgtttcagagccaggccaacgacaccaagcagggcatcaccgtgttcg 338 |||| ||| ||||||| ||||||||||| ||| | |||||| ||||| ||||| | |||| Sbjct: 334 acgtcatcgagacgttccagagccaggcgaacaagaccaaggagggcgtcaccatcttcg 393 Query: 339 cgcctcaagactcggcgttcgccgccctcaacgagaccgtgctgtccaacctcaccgccg 398 || | |||||||||||||||||| |||| || || | ||||||||||||| || Sbjct: 394 tccccaaggactcggcgttcgccgccatcaagcagtccaccttttccaacctcaccggcg 453 Query: 399 accagctc 406 |||||||| Sbjct: 454 accagctc 461 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggccccgcgccacgtcgagctcgccgagct 225 ||||||||||||||||| |||| | ||||||| ||||||||||| Sbjct: 237 ccggcgccggcgccggcgccgcactacgtcgacctcgccgagct 280
>gb|BT016304.1| Zea mays clone Contig137 mRNA sequence Length = 1191 Score = 54.0 bits (27), Expect = 5e-04 Identities = 140/177 (79%), Gaps = 3/177 (1%) Strand = Plus / Plus Query: 272 aagaccgacgtgatcaagacgtttcagagccaggccaacgacaccaagcag---ggcatc 328 ||||||| ||| ||| |||| || ||||||||||| |||||||| |||| | |||||| Sbjct: 296 aagaccggcgtcatcgagaccttccagagccaggcgaacgacacgaagcggggcggcatc 355 Query: 329 accgtgttcgcgcctcaagactcggcgttcgccgccctcaacgagaccgtgctgtccaac 388 ||||| |||| ||| | |||||||||||||| || || || ||||| | | ||||| Sbjct: 356 accgtcttcgtgcccaaggactcggcgttcgcggcgctgaagcagaccacgttcgccaac 415 Query: 389 ctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccaggtactac 445 |||||| ||||||||| ||||||| ||||| |||||| |||||| ||||||| Sbjct: 416 ctcacccaggaccagctcaggtcgctgctgctgtgccacgcgctgcccaagtactac 472
>gb|AY109752.1| Zea mays CL893_1 mRNA sequence Length = 1101 Score = 52.0 bits (26), Expect = 0.002 Identities = 76/92 (82%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 272 aagaccgacgtgatcaagacgtttcagagccaggccaacgacaccaagcag---ggcatc 328 ||||||| ||| ||| |||| || ||||||||||| |||||||| |||| | |||||| Sbjct: 330 aagaccggcgtcatcgagaccttccagagccaggcgaacgacacgaagcggggcggcatc 389 Query: 329 accgtgttcgcgcctcaagactcggcgttcgc 360 ||||| |||| ||| | |||||||||||||| Sbjct: 390 accgtcttcgtgcccaaggactcggcgttcgc 421
>gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full insert mRNA sequence Length = 954 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggccccgcgccacgt 210 |||||||||||||||||||||||| |||| Sbjct: 161 ccggcgccggcgccggccccgcgctacgt 189
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 392 accgccgaccagctccggtcgctc 415 |||||||||||||||||||||||| Sbjct: 239795 accgccgaccagctccggtcgctc 239772
>ref|XM_483207.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1078 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 272 aagaccgacgtgatcaagacgtttcagagccaggccaacgacaccaagcagggcatcacc 331 ||||| |||||| ||| |||||| ||||||||||| |||| || |||| | || ||||| Sbjct: 282 aagacggacgtgctcaggacgttccagagccaggcgaacggcagcaaggacgggatcacg 341 Query: 332 gtgttcg 338 ||||||| Sbjct: 342 gtgttcg 348 Score = 40.1 bits (20), Expect = 7.6 Identities = 50/60 (83%) Strand = Plus / Plus Query: 386 aacctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccaggtactac 445 ||||||||| ||||||||||| |||||| |||| ||||||| |||| ||||||||| Sbjct: 396 aacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgctgccgaggtactac 455
>ref|XM_477279.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1536 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccg 202 ||||||||||||||||||||||| Sbjct: 297 ccccggcgccggcgccggccccg 319
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcgcc 206 ||||||||||||||||||| ||||||| Sbjct: 26090195 ccccggcgccggcgccggcgccgcgcc 26090221 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 accccggcgccggcgccggc 198 |||||||||||||||||||| Sbjct: 27343147 accccggcgccggcgccggc 27343166
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 272 aagaccgacgtgatcaagacgtttcagagccaggccaacgacaccaagcagggcatcacc 331 ||||| |||||| ||| |||||| ||||||||||| |||| || |||| | || ||||| Sbjct: 24811935 aagacggacgtgctcaggacgttccagagccaggcgaacggcagcaaggacgggatcacg 24811876 Query: 332 gtgttcg 338 ||||||| Sbjct: 24811875 gtgttcg 24811869 Score = 40.1 bits (20), Expect = 7.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 386 aacctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccaggtactac 445 ||||||||| ||||||||||| |||||| |||| ||||||| |||| ||||||||| Sbjct: 24811821 aacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgctgccgaggtactac 24811762 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 175 cgagaccccggcgccggcgccggccccg 202 |||| |||||||||||||||| |||||| Sbjct: 24246119 cgagtccccggcgccggcgcccgccccg 24246146
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccg 202 ||||||||||||||||||||||| Sbjct: 8509872 ccccggcgccggcgccggccccg 8509894 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcgccggccccg 202 |||||||||||||||||||| Sbjct: 8363550 cggcgccggcgccggccccg 8363531
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 200 ccgcgccacgtcgagctcgccgagctg 226 ||||||| ||||||||||||||||||| Sbjct: 405756 ccgcgccgcgtcgagctcgccgagctg 405782 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcgc 205 |||||||||| ||||||||||||||| Sbjct: 263530 ccccggcgcccgcgccggccccgcgc 263555 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggcccc 201 |||||||||||||||||||||| Sbjct: 11867 ccccggcgccggcgccggcccc 11846 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 199 cccgcgccacgtcgagctcgccgag 223 ||||||||| ||||||||||||||| Sbjct: 3042083 cccgcgccaggtcgagctcgccgag 3042059 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 gaccccggcgccggcgccggcccc 201 ||||| |||||||||||||||||| Sbjct: 3792960 gacccaggcgccggcgccggcccc 3792937 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ccacgtcgagctcgccgagc 224 |||||||||||||||||||| Sbjct: 1589868 ccacgtcgagctcgccgagc 1589887
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 272 aagaccgacgtgatcaagacgtttcagagccaggccaacgacaccaagcagggcatcacc 331 ||||| |||||| ||| |||||| ||||||||||| |||| || |||| | || ||||| Sbjct: 112736 aagacggacgtgctcaggacgttccagagccaggcgaacggcagcaaggacgggatcacg 112677 Query: 332 gtgttcg 338 ||||||| Sbjct: 112676 gtgttcg 112670 Score = 40.1 bits (20), Expect = 7.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 386 aacctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccaggtactac 445 ||||||||| ||||||||||| |||||| |||| ||||||| |||| ||||||||| Sbjct: 112622 aacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgctgccgaggtactac 112563
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccg 202 ||||||||||||||||||||||| Sbjct: 42340 ccccggcgccggcgccggccccg 42362
>dbj|BS000008.1| Pan troglodytes chromosome 22 clone:RP43-011E05, map 22, complete sequences Length = 104995 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cccggcgccggcgccggccccgc 203 ||||||||||||||||||||||| Sbjct: 1503 cccggcgccggcgccggccccgc 1525
>dbj|BS000007.1| Pan troglodytes chromosome 22 clone:PTB-005B20, map 22, complete sequences Length = 123600 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cccggcgccggcgccggccccgc 203 ||||||||||||||||||||||| Sbjct: 115808 cccggcgccggcgccggccccgc 115830
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 272 aagaccgacgtgatcaagacgtttcagagccaggccaacgacaccaagcagggcatcacc 331 ||||| |||||| ||| |||||| ||||||||||| |||| || |||| | || ||||| Sbjct: 16381 aagacggacgtgctcaggacgttccagagccaggcgaacggcagcaaggacgggatcacg 16322 Query: 332 gtgttcg 338 ||||||| Sbjct: 16321 gtgttcg 16315 Score = 40.1 bits (20), Expect = 7.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 386 aacctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccaggtactac 445 ||||||||| ||||||||||| |||||| |||| ||||||| |||| ||||||||| Sbjct: 16267 aacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgctgccgaggtactac 16208
>dbj|AK109741.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E02, full insert sequence Length = 1536 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccg 202 ||||||||||||||||||||||| Sbjct: 297 ccccggcgccggcgccggccccg 319
>dbj|AK106964.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-F09, full insert sequence Length = 1077 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 272 aagaccgacgtgatcaagacgtttcagagccaggccaacgacaccaagcagggcatcacc 331 ||||| |||||| ||| |||||| ||||||||||| |||| || |||| | || ||||| Sbjct: 282 aagacggacgtgctcaggacgttccagagccaggcgaacggcagcaaggacgggatcacg 341 Query: 332 gtgttcg 338 ||||||| Sbjct: 342 gtgttcg 348 Score = 40.1 bits (20), Expect = 7.6 Identities = 50/60 (83%) Strand = Plus / Plus Query: 386 aacctcaccgccgaccagctccggtcgctcatgctgcaccacgccatgcccaggtactac 445 ||||||||| ||||||||||| |||||| |||| ||||||| |||| ||||||||| Sbjct: 396 aacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgctgccgaggtactac 455
>dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B02, full insert sequence Length = 1760 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcgcc 206 ||||||||||||||||||| ||||||| Sbjct: 1419 ccccggcgccggcgccggcgccgcgcc 1445
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcgcc 206 ||||||||||||||||||| ||||||| Sbjct: 26018371 ccccggcgccggcgccggcgccgcgcc 26018397 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 accccggcgccggcgccggc 198 |||||||||||||||||||| Sbjct: 27268747 accccggcgccggcgccggc 27268766
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgcgcc 206 ||||||||||||||||||| ||||||| Sbjct: 21476 ccccggcgccggcgccggcgccgcgcc 21450
>gb|AC129097.27| Papio anubis clone rp41-53o7, complete sequence Length = 186113 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggccccgc 203 |||||||||||||||||||||| Sbjct: 156219 ccggcgccggcgccggccccgc 156198
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcgc 205 |||||||||||||||||||| ||||| Sbjct: 2419642 ccccggcgccggcgccggccgcgcgc 2419667 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 cacgtcgagctcgccgagctgctc 229 ||||||| |||||||||||||||| Sbjct: 1919286 cacgtcgtgctcgccgagctgctc 1919309
>gb|BC086481.1| Mus musculus putative neuronal cell adhesion molecule, mRNA (cDNA clone MGC:103399 IMAGE:6505546), complete cds Length = 3140 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 106 ccccggctccggcgccggccccgcg 130
>ref|XM_466368.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1679 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 acgtcgagctcgccgagctgc 227 ||||||||||||||||||||| Sbjct: 920 acgtcgagctcgccgagctgc 940
>ref|NM_008988.1| Mus musculus putative neuronal cell adhesion molecule (Punc), mRNA Length = 3146 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 122 ccccggctccggcgccggccccgcg 146
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgcgccacgtcgagctcgccg 221 ||||||||||||||||||||| Sbjct: 2094960 cgcgccacgtcgagctcgccg 2094940
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 201 cgcgccacgtcgagctcgccgagctgctc 229 |||||| ||||||||||| |||||||||| Sbjct: 1017079 cgcgccgcgtcgagctcgacgagctgctc 1017107
>gb|BC067107.1| Homo sapiens putative neuronal cell adhesion molecule, mRNA (cDNA clone MGC:71289 IMAGE:6644528), complete cds Length = 3022 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 163 ccccggccccggcgccggccccgcg 187
>gb|BC042054.1| Homo sapiens putative neuronal cell adhesion molecule, mRNA (cDNA clone MGC:50440 IMAGE:5579570), complete cds Length = 2967 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 111 ccccggccccggcgccggccccgcg 135
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 201 cgcgccacgtcgagctcgccgagctgctc 229 |||||| ||||||||||| |||||||||| Sbjct: 2548679 cgcgccgcgtcgagctcgacgagctgctc 2548651
>ref|NM_004884.2| Homo sapiens putative neuronal cell adhesion molecule (PUNC), mRNA Length = 3103 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 111 ccccggccccggcgccggccccgcg 135
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 tgctttgcctggcgctctccc 137 ||||||||||||||||||||| Sbjct: 86738 tgctttgcctggcgctctccc 86758
>gb|AC110235.13| Mus musculus chromosome 9, clone RP23-100M12, complete sequence Length = 220755 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 24786 ccccggctccggcgccggccccgcg 24810
>gb|BC053057.1| Mus musculus putative neuronal cell adhesion molecule, mRNA (cDNA clone MGC:62345 IMAGE:5698028), complete cds Length = 3198 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 99 ccccggctccggcgccggccccgcg 123
>gb|AC161366.6| Mus musculus BAC clone RP24-230D17 from chromosome 9, complete sequence Length = 155733 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 19181 ccccggctccggcgccggccccgcg 19157
>gb|AC112161.9| Mus Musculus chromosome 9 BAC clone MGS1-117K9 ES cell line, Complete Sequence, complete sequence Length = 115135 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 98910 ccccggctccggcgccggccccgcg 98886
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 201 cgcgccacgtcgagctcgccgagctgctc 229 |||||| ||||||||||| |||||||||| Sbjct: 1833544 cgcgccgcgtcgagctcgacgagctgctc 1833572
>gb|DQ397851.1| Cenarchaeum symbiosum clone C13G08, complete sequence Length = 38845 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggccccg 202 ||||||||||||||||||||| Sbjct: 29084 ccggcgccggcgccggccccg 29104
>gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, complete sequence Length = 198295 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 107878 ccccggccccggcgccggccccgcg 107902
>gb|S82324.1| calcium/calmodulin-dependent protein kinase homolog|CaM kinase homolog|MCK1 [Zea mays=maize, cv. Merit, root caps, mRNA, 2483 nt] Length = 2483 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggccccg 202 ||||||||||||||||||||| Sbjct: 612 ccggcgccggcgccggccccg 592
>dbj|AK051027.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030056K15 product:putative neuronal cell adhesion molecule, full insert sequence Length = 2906 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 123 ccccggctccggcgccggccccgcg 147
>dbj|AK011916.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610208C01 product:putative neuronal cell adhesion molecule, full insert sequence Length = 3230 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 158 ccccggctccggcgccggccccgcg 182
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 gaccccggcgccggcgccggccccg 202 |||||||||||||| |||||||||| Sbjct: 26574287 gaccccggcgccggtgccggccccg 26574263
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 acgtcgagctcgccgagctgc 227 ||||||||||||||||||||| Sbjct: 21970056 acgtcgagctcgccgagctgc 21970036 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||| |||||| Sbjct: 19914739 ccccggcgccggcgccgcccccgc 19914716
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046L23 Length = 100041 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 acgtcgagctcgccgagctgc 227 ||||||||||||||||||||| Sbjct: 18678 acgtcgagctcgccgagctgc 18658
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 gaccccggcgccggcgccggccccg 202 |||||||||||||| |||||||||| Sbjct: 107940 gaccccggcgccggtgccggccccg 107916
>dbj|AK110457.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F05, full insert sequence Length = 3027 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggccccg 202 ||||||||||||||||||||| Sbjct: 1380 ccggcgccggcgccggccccg 1360
>dbj|AK109762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G11, full insert sequence Length = 1040 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 gaccccggcgccggcgccggccccg 202 |||||||||||||| |||||||||| Sbjct: 623 gaccccggcgccggtgccggccccg 647
>dbj|AK102182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086M11, full insert sequence Length = 1678 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 acgtcgagctcgccgagctgc 227 ||||||||||||||||||||| Sbjct: 919 acgtcgagctcgccgagctgc 939
>emb|AJ325960.1|HSA325960 Homo sapiens genomic sequence surrounding NotI site, clone NL1-BE1C Length = 805 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 172 ccccggccccggcgccggccccgcg 196
>gb|AF026465.1|AF026465 Mus musculus putative neuronal cell adhesion molecule (Punc) mRNA, complete cds Length = 3146 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgcg 204 ||||||| ||||||||||||||||| Sbjct: 122 ccccggctccggcgccggccccgcg 146
>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds; chivosazol biosynthetic gene cluster, complete sequence; and hypothetical protein gene, complete cds Length = 96547 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggccccgcgcc 206 ||||||||||||||||| ||||||| Sbjct: 22472 ccggcgccggcgccggcgccgcgcc 22448
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 523 cgccggcacgatcggcgtcgtgtcg 547 ||||||||||||| ||||||||||| Sbjct: 1192333 cgccggcacgatctgcgtcgtgtcg 1192309
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 gctgtccaacctcaccgccga 399 ||||||||||||||||||||| Sbjct: 2717054 gctgtccaacctcaccgccga 2717074
>gb|U46933.1|AAU46933 Avian adenovirus CELO, complete genome Length = 43804 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 cggcgccggcgccggccccgc 203 ||||||||||||||||||||| Sbjct: 17983 cggcgccggcgccggccccgc 18003
>dbj|D84507.1|MZECDPKA Zea mays mRNA for CDPK-related protein kinase, partial cds, clone ZmCRK1 Length = 2140 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggccccg 202 ||||||||||||||||||||| Sbjct: 356 ccggcgccggcgccggccccg 336
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11, complete sequence Length = 115808 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 33176 ccccggcgccggcgccggcgccgc 33153
>ref|XM_549813.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1704 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 gctctcggccttctccgcgctggc 471 |||| ||||||||||||||||||| Sbjct: 484 gctcccggccttctccgcgctggc 507
>ref|NM_188119.1| Oryza sativa (japonica cultivar-group), Ozsa8551 predicted mRNA Length = 2388 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 2302 ccccggcgccggcgccggcgccgc 2279
>ref|XM_483092.1| Oryza sativa (japonica cultivar-group), mRNA Length = 816 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 175 cgagaccccggcgccggcgccggccccg 202 |||| |||||||||||||||| |||||| Sbjct: 585 cgagtccccggcgccggcgcccgccccg 612
>ref|XM_475807.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1131 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 722 ccccggcgccggcgccggcgccgc 745
>ref|NM_197079.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0029C15.21), mRNA Length = 816 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggccccgcgc 205 ||||||||||||||||| |||||| Sbjct: 470 ccggcgccggcgccggcgccgcgc 447
>ref|NM_191908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1698 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 874 ccccggcgccggcgccggcgccgc 851
>ref|XM_515349.1| PREDICTED: Pan troglodytes LOC459090 (LOC459090), mRNA Length = 1791 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 83 ccggcgccggcgccggcccc 64
>ref|NM_186848.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1335 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcgccggccccg 202 |||||||||||||||||||| Sbjct: 321 cggcgccggcgccggccccg 340
>ref|XM_472659.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 59 ccggcgccggcgccggcccc 40
>gb|BT016396.1| Zea mays clone Contig229 mRNA sequence Length = 1341 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 accccggcgccggcgccggccccg 202 ||||||||||| |||||||||||| Sbjct: 713 accccggcgcccgcgccggccccg 736
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 cggcgccggcgccggccccgcgcc 206 ||||||| |||||||||||||||| Sbjct: 2126417 cggcgcccgcgccggccccgcgcc 2126394
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 tctccgcgctggcggcggcg 478 |||||||||||||||||||| Sbjct: 68021 tctccgcgctggcggcggcg 68002
>gb|AC145320.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041K10 map near E50283S, complete sequence Length = 140651 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 117839 ccggcgccggcgccggcccc 117858
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 121507 ccggcgccggcgccggcccc 121526
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggcc 199 |||||||||||||||||||| Sbjct: 61735 ccccggcgccggcgccggcc 61716
>gb|BC013789.1| Homo sapiens nescient helix loop helix 1, mRNA (cDNA clone MGC:17696 IMAGE:3866861), complete cds Length = 2527 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccggcgccggccccgcgccac 208 |||||||||||||| ||||||||| Sbjct: 624 gcgccggcgccggcgccgcgccac 647
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggcc 199 |||||||||||||||||||| Sbjct: 31618932 ccccggcgccggcgccggcc 31618951 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tctcccgcggcgcgctgtcc 151 |||||||||||||||||||| Sbjct: 11396192 tctcccgcggcgcgctgtcc 11396211 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||| |||||||||||||||||| Sbjct: 10914401 ccccgccgccggcgccggccccgc 10914378 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggcc 199 |||||||||||||||||||| Sbjct: 378849 ccccggcgccggcgccggcc 378830 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 378715 ccggcgccggcgccggcccc 378696
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ccacgtcgagctcgccgagctgct 228 |||||||||||||| ||||||||| Sbjct: 90721 ccacgtcgagctcgtcgagctgct 90744
>ref|XM_532087.2| PREDICTED: Canis familiaris similar to Negative elongation factor E (NELF-E) (RD protein) (LOC474854), mRNA Length = 1468 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 ccgcgctggcggcggcgagc 481 |||||||||||||||||||| Sbjct: 80 ccgcgctggcggcggcgagc 61
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggcc 199 |||||||||||||||||||| Sbjct: 106377 ccccggcgccggcgccggcc 106358 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 106243 ccggcgccggcgccggcccc 106224
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 ccacagcctcgatcgatcaggtgc 34 |||| ||||||||||||||||||| Sbjct: 3477497 ccaccgcctcgatcgatcaggtgc 3477474
>emb|AL445230.11| Human DNA sequence from clone RP11-517F10 on chromosome 1 Contains the 5' end of the COPA gene for coatomer protein complex subunit alpha, the gene for nicastrin (KIAA0253), the NHLH1 gene for nescient helix loop helix 1, the VANGL2 gene for vang-like 2 (van gogh, Drosophila) and a CpG island, complete sequence Length = 102345 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccggcgccggccccgcgccac 208 |||||||||||||| ||||||||| Sbjct: 31934 gcgccggcgccggcgccgcgccac 31957
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 cgccgccggcacgatcggcg 539 |||||||||||||||||||| Sbjct: 268683 cgccgccggcacgatcggcg 268702
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 cgccggcacgatcggcgtcg 542 |||||||||||||||||||| Sbjct: 3973278 cgccggcacgatcggcgtcg 3973259
>gb|AY341855.1| Oryza sativa (japonica cultivar-group) WRKY14 mRNA, complete cds Length = 1947 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 961 ccccggcgccggcgccggcgccgc 938
>gb|AY341844.1| Oryza sativa (japonica cultivar-group) WRKY3 mRNA, complete cds Length = 1858 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 917 ccccggcgccggcgccggcgccgc 894
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgc 203 ||||| |||||||||||||||||| Sbjct: 66628 ccccgccgccggcgccggccccgc 66651
>gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0033E08, complete sequence Length = 149241 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 51059 ccggcgccggcgccggcccc 51040
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 4091 ccggcgccggcgccggcccc 4072
>gb|BT007547.1| Synthetic construct Homo sapiens nescient helix loop helix 1 mRNA, partial cds Length = 402 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccggcgccggccccgcgccac 208 |||||||||||||| ||||||||| Sbjct: 195 gcgccggcgccggcgccgcgccac 218
>gb|BT006859.1| Homo sapiens nescient helix loop helix 1 mRNA, complete cds Length = 402 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccggcgccggccccgcgccac 208 |||||||||||||| ||||||||| Sbjct: 195 gcgccggcgccggcgccgcgccac 218
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 cgccgccggcacgatcggcg 539 |||||||||||||||||||| Sbjct: 1515731 cgccgccggcacgatcggcg 1515750
>tpg|BK005019.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 16 (WRKY16) gene, complete cds Length = 4090 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 2136 ccccggcgccggcgccggcgccgc 2113
>dbj|AB243684.1| Lemna gibba LgPRRH37 mRNA for pseudo-response regulator 37 homologue, complete cds Length = 2289 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 cggcgagcccggtgtccatgttcg 497 ||||||||||| |||||||||||| Sbjct: 1704 cggcgagcccgttgtccatgttcg 1681
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 cgcgctggcggcggcgagcccggt 486 |||||||||||||||| ||||||| Sbjct: 2107400 cgcgctggcggcggcgggcccggt 2107423
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggccccgcgc 205 ||||||||||||||||| |||||| Sbjct: 64557 ccggcgccggcgccggcgccgcgc 64534
>dbj|AK163013.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430073A11 product:unclassifiable, full insert sequence Length = 2307 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 20 ccggcgccggcgccggcccc 1
>dbj|AB066561.1| Oryza sativa ossap2 mRNA for secretory acid phosphatase precursor, complete cds Length = 1836 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 accccggcgccggcgccggc 198 |||||||||||||||||||| Sbjct: 119 accccggcgccggcgccggc 100
>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence Length = 42748 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 tctccgcgctggcggcggcg 478 |||||||||||||||||||| Sbjct: 1171 tctccgcgctggcggcggcg 1190
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 tccgcgctggcggcggcgagcccg 484 |||||||| ||||||||||||||| Sbjct: 27603 tccgcgctcgcggcggcgagcccg 27580
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 19402956 ccggcgccggcgccggcccc 19402975 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 13626603 ccggcgccggcgccggcccc 13626622 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 5715502 ccggcgccggcgccggcccc 5715483 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 tctccgcgctggcggcggcg 478 |||||||||||||||||||| Sbjct: 3246964 tctccgcgctggcggcggcg 3246983
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggccccgcgc 205 ||||||||||||||||| |||||| Sbjct: 17867484 ccggcgccggcgccggcgccgcgc 17867507
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccggcgccggccccgcgcca 207 |||||||||||||||||||| Sbjct: 12927428 ccggcgccggccccgcgcca 12927447
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 26652179 ccccggcgccggcgccggcgccgc 26652156
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggcc 199 |||||||||||||||||||| Sbjct: 31709448 ccccggcgccggcgccggcc 31709467 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tctcccgcggcgcgctgtcc 151 |||||||||||||||||||| Sbjct: 11392955 tctcccgcggcgcgctgtcc 11392974 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||| |||||||||||||||||| Sbjct: 10912502 ccccgccgccggcgccggccccgc 10912479 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggcc 199 |||||||||||||||||||| Sbjct: 378847 ccccggcgccggcgccggcc 378828 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 378713 ccggcgccggcgccggcccc 378694
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggccccgcgccacg 209 ||||||||||||||||| ||||| |||| Sbjct: 33887043 ccggcgccggcgccggcaccgcggcacg 33887070 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 27192026 ccccggcgccggcgccggcgccgc 27192049 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 9865501 ccccggcgccggcgccggcgccgc 9865478 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 gctctcggccttctccgcgctggc 471 |||| ||||||||||||||||||| Sbjct: 89983 gctcccggccttctccgcgctggc 89960
>gb|AF244706.1|AF244706 Zea mays glutathione S-transferase GST 41 mRNA, complete cds Length = 1131 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 773 ccggcgccggcgccggcccc 754
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tctcccgcggcgcgctgtcc 151 |||||||||||||||||||| Sbjct: 104489 tctcccgcggcgcgctgtcc 104508
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025D05 Length = 145684 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 129751 ccccggcgccggcgccggcgccgc 129728
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 1267 ccccggcgccggcgccggcgccgc 1244
>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0021G06 Length = 137678 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcgccggccccg 202 |||||||||||||||||||| Sbjct: 68648 cggcgccggcgccggccccg 68629
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||| |||||| Sbjct: 92340 ccccggcgccggcgccgcccccgc 92317
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 99704 ccccggcgccggcgccggcgccgc 99727
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcgccggccccg 202 |||||||||||||||||||| Sbjct: 7557751 cggcgccggcgccggccccg 7557770
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06 Length = 166497 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggccccgcgccacg 209 ||||||||||||||||| ||||| |||| Sbjct: 126090 ccggcgccggcgccggcaccgcggcacg 126117
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggccccgcgccacg 209 ||||||||||||||||| ||||| |||| Sbjct: 18486 ccggcgccggcgccggcaccgcggcacg 18513
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 gctctcggccttctccgcgctggc 471 |||| ||||||||||||||||||| Sbjct: 87785 gctcccggccttctccgcgctggc 87762
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 175 cgagaccccggcgccggcgccggccccg 202 |||| |||||||||||||||| |||||| Sbjct: 112458 cgagtccccggcgccggcgcccgccccg 112485
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||| |||||| Sbjct: 18860 ccccggcgccggcgccgcccccgc 18837
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0505H05 Length = 152845 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccggcgccggccccgcgcca 207 |||||||||||||||||||| Sbjct: 89412 ccggcgccggccccgcgcca 89431
>gb|AY891682.1| Synthetic construct Homo sapiens clone FLH012862.01L nescient helix loop helix 1 (NHLH1) mRNA, partial cds Length = 402 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccggcgccggccccgcgccac 208 |||||||||||||| ||||||||| Sbjct: 195 gcgccggcgccggcgccgcgccac 218
>gb|AY889122.1| Synthetic construct Homo sapiens clone FLH012865.01X nescient helix loop helix 1 (NHLH1) mRNA, complete cds Length = 402 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccggcgccggccccgcgccac 208 |||||||||||||| ||||||||| Sbjct: 195 gcgccggcgccggcgccgcgccac 218
>dbj|AK119465.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-A02, full insert sequence Length = 1497 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tctcccgcggcgcgctgtcc 151 |||||||||||||||||||| Sbjct: 760 tctcccgcggcgcgctgtcc 779
>dbj|AK111013.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-F12, full insert sequence Length = 490 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 449 ccccggcgccggcgccggcgccgc 426
>dbj|AK108934.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A12, full insert sequence Length = 2414 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggcc 199 |||||||||||||||||||| Sbjct: 456 ccccggcgccggcgccggcc 475
>dbj|AK108406.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-G09, full insert sequence Length = 998 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 245 ccggcgccggcgccggcccc 226
>dbj|AK108305.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-F05, full insert sequence Length = 788 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 175 cgagaccccggcgccggcgccggccccg 202 |||| |||||||||||||||| |||||| Sbjct: 317 cgagtccccggcgccggcgcccgccccg 344
>dbj|AK106948.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-E01, full insert sequence Length = 1774 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 496 ccccggcgccggcgccggcgccgc 473
>dbj|AK101065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023E01, full insert sequence Length = 1705 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 gctctcggccttctccgcgctggc 471 |||| ||||||||||||||||||| Sbjct: 485 gctcccggccttctccgcgctggc 508
>dbj|AK072284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018F03, full insert sequence Length = 1388 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 812 ccccggcgccggcgccggcgccgc 835
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 gccccgcgccacgtcgagctcgcc 220 |||| ||||||||||||||||||| Sbjct: 2691637 gcccagcgccacgtcgagctcgcc 2691660
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 gccggcgccggccccgcgcc 206 |||||||||||||||||||| Sbjct: 2066973 gccggcgccggccccgcgcc 2066992
>dbj|AK066273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061L15, full insert sequence Length = 1853 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 accccggcgccggcgccggc 198 |||||||||||||||||||| Sbjct: 137 accccggcgccggcgccggc 118
>dbj|AK063447.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-F08, full insert sequence Length = 2121 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggccccgcgccacg 209 ||||||||||||||||| ||||| |||| Sbjct: 27 ccggcgccggcgccggcaccgcggcacg 54
>dbj|AK060489.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-C07, full insert sequence Length = 1350 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 791 ccccggcgccggcgccggcgccgc 814
>dbj|AK058368.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G03, full insert sequence Length = 1475 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 accccggcgccggcgccggc 198 |||||||||||||||||||| Sbjct: 136 accccggcgccggcgccggc 117
>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5) Length = 893329 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcgccggcgccggccccg 202 |||||||||||||||||||| Sbjct: 598279 cggcgccggcgccggccccg 598298
>gb|AF118856.1|AF118856 Streptomyces noursei putative pleitropic regulator gene, partial cds; SsmA (ssmA) and SsmB precursor (ssmB) genes, complete cds; and putative AMP binding protein gene, partial cds Length = 1795 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 454 ggccttctccgcgctggcggcggc 477 ||||| |||||||||||||||||| Sbjct: 225 ggcctgctccgcgctggcggcggc 202
>gb|U57648.1|PDU57648 Prune dwarf virus putative viral replicase gene, complete cds Length = 3374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tctcgtcagcgcattgcttt 122 |||||||||||||||||||| Sbjct: 117 tctcgtcagcgcattgcttt 98
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ttctccgcgctggcggcggc 477 |||||||||||||||||||| Sbjct: 2112533 ttctccgcgctggcggcggc 2112514
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggccccgcgc 205 ||||||||||||||||| |||||| Sbjct: 17876737 ccggcgccggcgccggcgccgcgc 17876760
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 19562505 ccggcgccggcgccggcccc 19562524 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 13706782 ccggcgccggcgccggcccc 13706801 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccggcgccggcgccggcccc 201 |||||||||||||||||||| Sbjct: 5781979 ccggcgccggcgccggcccc 5781960 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 tctccgcgctggcggcggcg 478 |||||||||||||||||||| Sbjct: 3255669 tctccgcgctggcggcggcg 3255688
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 accccggcgccggcgccggc 198 |||||||||||||||||||| Sbjct: 11467 accccggcgccggcgccggc 11486
>gb|AY870604.1| Oryza sativa (japonica cultivar-group) WRKY16 mRNA, complete cds Length = 1840 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 ccccggcgccggcgccggccccgc 203 ||||||||||||||||||| |||| Sbjct: 941 ccccggcgccggcgccggcgccgc 918
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tgtcgggctgggccaccgcc 562 |||||||||||||||||||| Sbjct: 258393 tgtcgggctgggccaccgcc 258374
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggcgccggcgccggccccg 202 |||||||||||||||||||| Sbjct: 106976 cggcgccggcgccggccccg 106957
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tgtcgggctgggccaccgcc 562 |||||||||||||||||||| Sbjct: 258392 tgtcgggctgggccaccgcc 258373
>ref|NM_005598.2| Homo sapiens nescient helix loop helix 1 (NHLH1), mRNA Length = 2527 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccggcgccggccccgcgccac 208 |||||||||||||| ||||||||| Sbjct: 624 gcgccggcgccggcgccgcgccac 647
>gb|M97507.1|HUMHEN1A Homo sapiens helix-loop-helix protein (HEN1) gene, complete cds Length = 600 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccggcgccggccccgcgccac 208 |||||||||||||| ||||||||| Sbjct: 393 gcgccggcgccggcgccgcgccac 416
>gb|M96739.1|HUMNSCL1A Human NSCL-1 mRNA sequence Length = 2601 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gcgccggcgccggccccgcgccac 208 |||||||||||||| ||||||||| Sbjct: 639 gcgccggcgccggcgccgcgccac 662
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tgtcgggctgggccaccgcc 562 |||||||||||||||||||| Sbjct: 272341 tgtcgggctgggccaccgcc 272322
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 gctctcggccttctccgcgctggc 471 |||| ||||||||||||||||||| Sbjct: 38529 gctcccggccttctccgcgctggc 38506
>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0402A09 Length = 141966 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 gctctcggccttctccgcgctggc 471 |||| ||||||||||||||||||| Sbjct: 74913 gctcccggccttctccgcgctggc 74890 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,646,658 Number of Sequences: 3902068 Number of extensions: 3646658 Number of successful extensions: 88036 Number of sequences better than 10.0: 157 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80161 Number of HSP's gapped (non-prelim): 7820 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
