ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart12f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FIG2_YEAST (P25653) Factor-induced gene 2 precursor (Cell wall a... 40 0.004
2AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor 36 0.082
3PIMT_RHOPA (Q6NCU3) Protein-L-isoaspartate O-methyltransferase (... 35 0.18
4DC1L1_MOUSE (Q8R1Q8) Cytoplasmic dynein 1 light intermediate cha... 32 0.90
5CRH1_YEAST (P53301) Probable glycosidase CRH1 precursor (EC 3.2.... 32 0.90
6WSC2_YEAST (P53832) Cell wall integrity and stress response comp... 32 1.5
7Y2318_SYNP7 (P37372) Hypothetical protein Synpcc7942_2318 (ORF 2) 31 2.0
8STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41) 31 2.0
9CH18_DROME (P07184) Chorion protein S18 31 2.0
10QAY_NEUCR (P11636) Quinate permease (Quinate transporter) 31 2.6
11SUZ12_DROME (Q9NJG9) Polycomb protein Su(z)12 (Suppressor 12 of ... 30 3.4
12YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 pre... 30 4.5
13STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoi... 30 4.5
14RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast prec... 30 5.9
15FTSK2_NEIMB (Q9JZG4) DNA translocase ftsK 2 30 5.9
16FTSK2_NEIMA (Q9JUK9) DNA translocase ftsK 2 30 5.9
17GCH1_DROME (P48596) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I... 29 7.7
18BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-assoc... 29 7.7
19TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.... 29 7.7
20HSCA_CHRVO (Q7NZ33) Chaperone protein hscA homolog 29 7.7
21DC1L1_RAT (Q9QXU8) Cytoplasmic dynein 1 light intermediate chain... 29 7.7
22SYL_SILPO (Q5LMY0) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 29 10.0
23NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo... 29 10.0
24SYI_DEIRA (Q9RUP8) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 29 10.0
25ARMX1_HUMAN (Q9P291) Armadillo repeat-containing X-linked protei... 29 10.0
26AREA_EMENI (P17429) Nitrogen regulatory protein areA 29 10.0

>FIG2_YEAST (P25653) Factor-induced gene 2 precursor (Cell wall adhesin FIG2)|
          Length = 1609

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 23/171 (13%)
 Frame = -3

Query: 472  VPTQSARPCTTTCGVKSVSSRSASTYA--FCRTVQALDAKGSFHPW*SQ*STWNPST--- 308
            VPTQS+ P +T     SVS+ S+S+++     T+ +        P  S  S  +PS+   
Sbjct: 1235 VPTQSSSPASTLAYSPSVSTSSSSSFSTTTASTLTSTHTSVPLLPSSSSISASSPSSTSL 1294

Query: 307  -STARSPPALASEXXXXXXXXXXXXXXXXAHPCEEKSSTSTGPGARS------STGSGAE 149
             ST+   PA  S                 + P   KSS S  P + S      S+ S + 
Sbjct: 1295 LSTSLPSPAFTSSTLPTATAVSSSTFIASSLPLSSKSSLSLSPVSSSILMSQFSSSSSSS 1354

Query: 148  AVAPPLPKHA-----------RKRGAIATSTCLPPSRSSGDVNVVGKGSDC 29
            +    LP  +           +   +IAT TC   S+   +V+ +  GS+C
Sbjct: 1355 SSLASLPSLSISPTVDTVSVLQPTTSIATLTC-TDSQCQQEVSTICNGSNC 1404



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>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 35.8 bits (81), Expect = 0.082
 Identities = 34/134 (25%), Positives = 47/134 (35%)
 Frame = -3

Query: 466 TQSARPCTTTCGVKSVSSRSASTYAFCRTVQALDAKGSFHPW*SQ*STWNPSTSTARSPP 287
           T S+ P TT+    S S  S ST     +  +     S     S  ST + STST+   P
Sbjct: 176 TTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSS----SSTSTSSSSTSTS---P 228

Query: 286 ALASEXXXXXXXXXXXXXXXXAHPCEEKSSTSTGPGARSSTGSGAEAVAPPLPKHARKRG 107
           +  S                 +      SSTST P + S++ S            A    
Sbjct: 229 SSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTS 288

Query: 106 AIATSTCLPPSRSS 65
             + ST   PS +S
Sbjct: 289 TSSYSTSTSPSLTS 302



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 26/104 (25%), Positives = 42/104 (40%)
 Frame = -3

Query: 475 SVPTQSARPCTTTCGVKSVSSRSASTYAFCRTVQALDAKGSFHPW*SQ*STWNPSTSTAR 296
           S  T S+   T++    + SS ++++ +   T  +L +  S     SQ ST   S+ST+ 
Sbjct: 202 STSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTST 261

Query: 295 SPPALASEXXXXXXXXXXXXXXXXAHPCEEKSSTSTGPGARSST 164
           SP +  S                 +       STST P   SS+
Sbjct: 262 SPSS-TSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSS 304



 Score = 28.9 bits (63), Expect = 10.0
 Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 1/158 (0%)
 Frame = -3

Query: 505 SRMAWASLSCSVPTQSARPCTTTCGVKSVSSRSASTYAFCRTVQALDAKGSFHPW*SQ*S 326
           SR +  +LS  V +  A P ++T    ++S  S  T   C T              S+  
Sbjct: 94  SRFSTLTLSTEVCSHEACPSSSTLPTTTLSVTSKFTSYICPTCHTTAISSL-----SEVG 148

Query: 325 TWNPSTSTARSPPALASEXXXXXXXXXXXXXXXXAHPCEEK-SSTSTGPGARSSTGSGAE 149
           T    +S+A  P    S                 ++P     SSTST P + S++ S   
Sbjct: 149 TTTVVSSSAIEP----SSASIISPVTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTS 204

Query: 148 AVAPPLPKHARKRGAIATSTCLPPSRSSGDVNVVGKGS 35
             +      +      ++ST   PS +S   ++    S
Sbjct: 205 TSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSS 242



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>PIMT_RHOPA (Q6NCU3) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)|
           (Protein-beta-aspartate methyltransferase) (PIMT)
           (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl
           protein carboxyl methyltransferase)
          Length = 218

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +3

Query: 108 PRFLACLGRGGATASAPEPVEDL----APGPVLVELFSSQGCAASPEADALVARLAQESS 275
           PR LA + +    A  PEP+ DL    AP P+  E   SQ    +   +AL+ + +    
Sbjct: 14  PRVLAAMRKVPREAFLPEPMRDLAYEDAPVPIAAEQTMSQPYIVALMVEALLLQGSDNVL 73

Query: 276 EASAGGERAVLVLG 317
           E  AG   A  VLG
Sbjct: 74  EIGAGSGYAAAVLG 87



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>DC1L1_MOUSE (Q8R1Q8) Cytoplasmic dynein 1 light intermediate chain 1 (Dynein|
           light intermediate chain 1, cytosolic) (Dynein light
           chain A) (DLC-A)
          Length = 523

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 208 EKSSTSTGPGARSSTGSGAEAVAPPLPKHARKRG 107
           +K+ +  GPG   S G GA   +P LP  A+K G
Sbjct: 454 KKTGSPGGPGVGGSPGGGAAGASPSLPPSAKKSG 487



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>CRH1_YEAST (P53301) Probable glycosidase CRH1 precursor (EC 3.2.-.-) (Congo|
           red hypersensitive protein 1)
          Length = 507

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 39/159 (24%), Positives = 58/159 (36%)
 Frame = -3

Query: 490 ASLSCSVPTQSARPCTTTCGVKSVSSRSASTYAFCRTVQALDAKGSFHPW*SQ*STWNPS 311
           +S + S    S+   T +  V S  S SAS+         + +  S     S  S+ +PS
Sbjct: 304 SSSTSSSTVSSSASSTVSSSVSSTVSSSASSTVSSSVSSTVSSSSSV----SSSSSTSPS 359

Query: 310 TSTARSPPALASEXXXXXXXXXXXXXXXXAHPCEEKSSTSTGPGARSSTGSGAEAVAPPL 131
           +STA S   LAS                 +   +  +S+ST     SST +       P 
Sbjct: 360 SSTATSSKTLASSSVTTSSSISSFEKQSSSSSKKTVASSSTSESIISSTKT-------PA 412

Query: 130 PKHARKRGAIATSTCLPPSRSSGDVNVVGKGSDCQCQDD 14
              +  R  +A +T    S  S D  V  KG      +D
Sbjct: 413 TVSSTTRSTVAPTT--QQSSVSSDSPVQDKGGVATSSND 449



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>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 27/124 (21%), Positives = 46/124 (37%)
 Frame = -3

Query: 460 SARPCTTTCGVKSVSSRSASTYAFCRTVQALDAKGSFHPW*SQ*STWNPSTSTARSPPAL 281
           S    T++    + ++ S+ST    +T   LD K S     S  +T + S+S+  S    
Sbjct: 121 STADSTSSTATSTSTTSSSSTSVSSKTSTKLDTKTST----SSSATHSSSSSSTTSTTTS 176

Query: 280 ASEXXXXXXXXXXXXXXXXAHPCEEKSSTSTGPGARSSTGSGAEAVAPPLPKHARKRGAI 101
           +SE                       SST++   + S+T S   A +       +   + 
Sbjct: 177 SSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSS 236

Query: 100 ATST 89
            TST
Sbjct: 237 TTST 240



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>Y2318_SYNP7 (P37372) Hypothetical protein Synpcc7942_2318 (ORF 2)|
          Length = 208

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
 Frame = +3

Query: 162 PVEDLAPGPVLVELFSS----QGCAASPEADALVARLAQESSEASAGGERAVLVLGFHVD 329
           P  D  P  + V  F +    QG   SP+   ++A+L  E     AG  + VL  GF   
Sbjct: 49  PENDRDPNWIAVLHFQTPADLQGWLDSPQRAEILAQLPPEL----AGYSKTVLPQGF-AP 103

Query: 330 YWDYQGWKDPFASSAWTVRQKAYVEALRLDTLFTPQVVVQGRADCV 467
           ++     K P    A TV    Y   L L+ L TP +   GRA  V
Sbjct: 104 WFSQLLHKPPSWKMALTVLLALYPTVLLLNLLITPHLQGLGRAGAV 149



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>STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41)|
          Length = 1657

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -3

Query: 217 PCEEKSSTSTGPGARSSTGSGAEAVAPPLPKHARKRGAIATSTCLPP 77
           P +E S T   P A SSTG+ A A  PP    A K+   A     PP
Sbjct: 667 PVQELSPT---PEASSSTGTSAPARPPPARPEAPKKDETAVDAAAPP 710



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>CH18_DROME (P07184) Chorion protein S18|
          Length = 172

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +3

Query: 129 GRGGATASAPEPVEDLAPGPVLVELFSSQGCAASPEADALVARLAQESSEASAGG 293
           G GGA  S P PV     G  +   +S  G   +P  DA    LA+ +  A + G
Sbjct: 62  GYGGAYESVPVPVSSAYSGANVGSQYSGSGYGGAPPVDAQAIALAKLALAAPSAG 116



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>QAY_NEUCR (P11636) Quinate permease (Quinate transporter)|
          Length = 537

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 81  GRHVDVAMAPRFLACLGRGGATASAPEPVEDLAPGPV 191
           GR +D  +A R LA +G GGA+   P  + +LAP  V
Sbjct: 121 GRGIDPIIAGRVLAGIGVGGASNMVPIYISELAPPAV 157



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>SUZ12_DROME (Q9NJG9) Polycomb protein Su(z)12 (Suppressor 12 of zeste protein)|
          Length = 900

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = -3

Query: 217 PCEEKSSTSTGPGARSSTGSGAEAVAPP--LPKHARKRGAIATSTCLPPSRSSGDVN 53
           P       ST   + S +GSG+ ++ PP  +P H  KRG+ A+S   P  +S G  N
Sbjct: 691 PAPPADQASTSSASTSGSGSGSSSMQPPKRMPAHL-KRGSAASS---PGVQSKGTEN 743



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>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor|
          Length = 317

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 2/138 (1%)
 Frame = -3

Query: 463 QSARPCTTTCGVKSVSSRSASTYAFCRTVQALDAKGSFHPW*SQ*STWNPSTSTARSPPA 284
           Q+   CT +    S S   +ST      +    +   F    S  ST + S+S++ S P+
Sbjct: 109 QACSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFIT--SSSSTPSSSSSSSSSSPS 166

Query: 283 LASEXXXXXXXXXXXXXXXXAHPCEEKSSTSTGPGARSSTGSGAEAVAPPLPKHARK--R 110
            +S                        SS+S+   + SS+ S   + +P   K + K   
Sbjct: 167 SSSSKSSSSSKSSSSSSSSSK---SSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSS 223

Query: 109 GAIATSTCLPPSRSSGDV 56
            +  TST    S SSG +
Sbjct: 224 SSFITSTTPASSSSSGAI 241



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>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac|
          Length = 1120

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 40/176 (22%), Positives = 57/176 (32%), Gaps = 4/176 (2%)
 Frame = -3

Query: 541 FTFMAGEG*RGASRMAW----ASLSCSVPTQSARPCTTTCGVKSVSSRSASTYAFCRTVQ 374
           F  M  E  R AS +A     A  S S  + SAR   T     + S+R+AST A      
Sbjct: 106 FELMVEEVARNASAVAQNTAAAKKSASDASTSAREAATHAADAADSARAASTSAGQAASS 165

Query: 373 ALDAKGSFHPW*SQ*STWNPSTSTARSPPALASEXXXXXXXXXXXXXXXXAHPCEEKSST 194
           A  A           S    ST    +  + A+                 +      S  
Sbjct: 166 AQSASS---------SAGTASTKATEASKSAAAAESSKSAAATSAGAAKTSETNASASLQ 216

Query: 193 STGPGARSSTGSGAEAVAPPLPKHARKRGAIATSTCLPPSRSSGDVNVVGKGSDCQ 26
           S    A ++T   +EA        A K  A ++ T    S SS   +    G+  +
Sbjct: 217 SAATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAK 272



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>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor|
          Length = 1783

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 22/79 (27%), Positives = 29/79 (36%)
 Frame = -3

Query: 328 STWNPSTSTARSPPALASEXXXXXXXXXXXXXXXXAHPCEEKSSTSTGPGARSSTGSGAE 149
           S  + STS+A S  ++                     P  E+    T PG  S T  GA 
Sbjct: 422 SAASSSTSSASSSSSMNDGSNAKKTSDAAVSLPVGQQPAAEQPHVPTAPGGPSQT--GAS 479

Query: 148 AVAPPLPKHARKRGAIATS 92
           AVA   P  A    A+A +
Sbjct: 480 AVAAQAPSSAMPTAAMAAT 498



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>FTSK2_NEIMB (Q9JZG4) DNA translocase ftsK 2|
          Length = 1014

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 144 TASAPEPVEDLAPGPVLVELFSSQGCAASPEADALVARLAQESSEA 281
           T   PEP+E L    V+V+ F+     A  + + L+ARLAQ++  A
Sbjct: 787 TPDDPEPLEKLPFIVVVVDEFADLMMTAGKKIEELIARLAQKARAA 832



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>FTSK2_NEIMA (Q9JUK9) DNA translocase ftsK 2|
          Length = 1014

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 144 TASAPEPVEDLAPGPVLVELFSSQGCAASPEADALVARLAQESSEA 281
           T   PEP+E L    V+V+ F+     A  + + L+ARLAQ++  A
Sbjct: 787 TPDNPEPLEKLPFIVVVVDEFADLMMTAGKKIEELIARLAQKARAA 832



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>GCH1_DROME (P48596) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I) (Protein|
           punch)
          Length = 324

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 141 ATASAPEPVEDLAPGPVLVELFSSQ 215
           ATA A  PVE++AP P LV L  +Q
Sbjct: 61  ATAIAGTPVEEVAPAPALVPLAGNQ 85



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>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1154

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -3

Query: 196 TSTGPGARSSTGSGAEAVAPPLPKHARKRGAIATSTCLPPSRSSGDVNVVG 44
           T TG GAR     GAEA  P            A +T LPPS ++ D +  G
Sbjct: 387 TMTGNGARPPPAPGAEAATP----------GSAQATSLPPSSTTVDSSTEG 427



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>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)|
           (SUMO1-protein E3 ligase Topors) (Topoisomerase
           I-binding RING finger protein) (Topoisomerase I-binding
           arginine/serine-rich protein) (Tumor suppressor
           p53-binding protein 3) (p53-bindi
          Length = 1033

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 23/69 (33%), Positives = 30/69 (43%)
 Frame = -3

Query: 211 EEKSSTSTGPGARSSTGSGAEAVAPPLPKHARKRGAIATSTCLPPSRSSGDVNVVGKGSD 32
           EEK STS  P  R S+ +  + V  P     RK G   +S     SRS  D     K   
Sbjct: 562 EEKRSTSL-PAPRDSSSTRGDRVCSPYNHRHRKGGRSRSSDSRSQSRSGHDPRNHRKHGK 620

Query: 31  CQCQDDRSR 5
            + ++ RSR
Sbjct: 621 KRLRNKRSR 629



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>HSCA_CHRVO (Q7NZ33) Chaperone protein hscA homolog|
          Length = 619

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
 Frame = +3

Query: 87  HVDVAMAPRFLACLGRGGA----TASAPEPVEDLAPGPVLVELFSSQGCAASPEADALVA 254
           H  +    RF+   GRG +      S P    D APG  +V+L +  G  +  E  + + 
Sbjct: 80  HNTIVSVKRFM---GRGVSDIKDAGSLPYRFVD-APG--MVQLVTRAGVKSPVEVSSDIL 133

Query: 255 RLAQESSEASAGGE--RAVLVLGFHVDYWDYQGWKD 356
           R  +E +EAS GGE   AV+ +  + D    Q  KD
Sbjct: 134 RALKERAEASLGGELTGAVITVPAYFDDAQRQATKD 169



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>DC1L1_RAT (Q9QXU8) Cytoplasmic dynein 1 light intermediate chain 1 (Dynein|
           light intermediate chain 1, cytosolic) (Dynein light
           chain A) (DLC-A)
          Length = 523

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 208 EKSSTSTGPGARSSTGSGAEAVAPPLPKHARKRG 107
           +K+ +  GPG   S G GA   +  LP  A+K G
Sbjct: 454 KKTGSPGGPGVGGSPGGGAAGASTSLPPSAKKSG 487



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>SYL_SILPO (Q5LMY0) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 852

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
 Frame = +3

Query: 327 DYWDYQGWKDPFASSAWTVRQKAYVEALRLDTLFTPQVVVQGR--------ADCVGTEQD 482
           D W +QG +   A++ W V      EA+ +D L T  V + G+        AD   T+ +
Sbjct: 764 DIWAHQGGEGLIAAAPWPVAD----EAMLVDALVTLPVQINGKRRAEISVPADMDKTQVE 819

Query: 483 KLA 491
           KLA
Sbjct: 820 KLA 822



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>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
 Frame = -3

Query: 292  PPALASEXXXXXXXXXXXXXXXXAHPCEEKSSTS---TGPGARSSTGSGAEAVAPP-LPK 125
            P +LA E                  P  + SSTS   T P   S   SG    APP L K
Sbjct: 1323 PSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGK 1382

Query: 124  HAR---KRGAIATSTCLPPSRSSGDVNVVG 44
            H        A  TS   P + S+    V G
Sbjct: 1383 HTEPPVTSSATTTSVAPPAATSTSSTAVFG 1412



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>SYI_DEIRA (Q9RUP8) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
            ligase) (IleRS)
          Length = 1078

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 138  GATASAPEPVEDLAPGPVLVELFSSQGCAASPEADALVA 254
            G +  A     DL PG VLV+  + +G AA+ +A  LVA
Sbjct: 951  GFSVQADGVTFDLTPGSVLVDAKAPEGVAAAEDAGYLVA 989



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>ARMX1_HUMAN (Q9P291) Armadillo repeat-containing X-linked protein 1 (Protein|
           ALEX1) (ARM protein lost in epithelial cancers on
           chromosome X 1)
          Length = 453

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = -3

Query: 211 EEKSSTSTGPGARSSTGSGAEAVAPPLPKHARKRGAIATSTCLPP---SRSSGDVNVVGK 41
           +E++S   G GAR  T SG   +AP LP    + G      C P    SR+ G  +   K
Sbjct: 116 KEQASAKAGKGARVGTISGNRTLAPSLPCPGGRGGG-----CHPTRSGSRAGGRASGKSK 170

Query: 40  G 38
           G
Sbjct: 171 G 171



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>AREA_EMENI (P17429) Nitrogen regulatory protein areA|
          Length = 876

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 23/84 (27%), Positives = 34/84 (40%)
 Frame = -3

Query: 313 STSTARSPPALASEXXXXXXXXXXXXXXXXAHPCEEKSSTSTGPGARSSTGSGAEAVAPP 134
           S +T+ SPPA+                     P +  S+ +T PG  ++ G GA  VAP 
Sbjct: 760 SNTTSESPPAMPGSSGRGSGVVPIAAA-----PPKSSSAATTSPG--TNNGCGAVQVAPK 812

Query: 133 LPKHARKRGAIATSTCLPPSRSSG 62
             +   K   +  +   P S SSG
Sbjct: 813 RQRRLEKASDVDMAES-PSSTSSG 835


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,639,875
Number of Sequences: 219361
Number of extensions: 846181
Number of successful extensions: 4133
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4116
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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