Clone Name | bart12e10 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_475281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 395 ccgaatcccaccccctcgctcgatttctgggacgaggacgagttcgagggcatccctgtc 454 ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 301 ccgaaccccaccccgacgctcgatctctgggacgaggacgagttcgagggcatccctgtc 360 Query: 455 ccggaagcggcggtctccggcgactcctccgcgccggccgagtccgccccgtcagatccc 514 ||||||||||| ||||| ||| |||||| ||||||| || ||||||||||||||||| Sbjct: 361 ccggaagcggcctcctccgacgaatcctccacgccggcggaagccgccccgtcagatccc 420 Score = 95.6 bits (48), Expect = 1e-16 Identities = 195/244 (79%) Strand = Plus / Plus Query: 104 atggcggcgccgagctggatccggctgccacgcgccaccataatcctgctcctgctcgcc 163 |||||| || |||||| |||||||| ||||||||| | || |||| ||||||||||| Sbjct: 1 atggcgacggcgagctcgatccggccgccacgcgcggcgctagtcctcctcctgctcgcg 60 Query: 164 ctccacctctccctctccctcgccgcccagttcgaggggttcgactccgacgagctcccc 223 || | |||||||| ||||||||||||| |||||||| || | ||||||||| |||| | Sbjct: 61 ctgtccttctccctcaccctcgccgcccacttcgagggctttggctccgacgacctccac 120 Query: 224 tcctccgccgccggcgacgtcgcgtcctccgacgatgatgacgaggggctcgacctcgac 283 ||| || ||||| || | | || | |||||| || ||||||||||||||| |||| Sbjct: 121 tccgcccacgccgacgcggcctcggcagacgacgaagacgacgaggggctcgacgtcgag 180 Query: 284 ctcccgccccctccgcccatctccgtctccgtctccgcgccttcccctcccgtgaccacc 343 |||||||| || |||| ||||||| ||||| || | |||||||||||||| |||||| Sbjct: 181 ctcccgccgccgccgcgcatctccctctccacttcaactccttcccctcccgtcaccacc 240 Query: 344 acca 347 |||| Sbjct: 241 acca 244
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04, complete sequence Length = 103458 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 395 ccgaatcccaccccctcgctcgatttctgggacgaggacgagttcgagggcatccctgtc 454 ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 73516 ccgaaccccaccccgacgctcgatctctgggacgaggacgagttcgagggcatccctgtc 73575 Query: 455 ccggaagcggcggtctccggcgactcctccgcgccggccgagtccgccccgtcagatccc 514 ||||||||||| ||||| ||| |||||| ||||||| || ||||||||||||||||| Sbjct: 73576 ccggaagcggcctcctccgacgaatcctccacgccggcggaagccgccccgtcagatccc 73635 Score = 109 bits (55), Expect = 9e-21 Identities = 205/255 (80%) Strand = Plus / Plus Query: 93 cctccccatccatggcggcgccgagctggatccggctgccacgcgccaccataatcctgc 152 ||||||| ||||||||| || |||||| |||||||| ||||||||| | || |||| | Sbjct: 73205 cctccccgtccatggcgacggcgagctcgatccggccgccacgcgcggcgctagtcctcc 73264 Query: 153 tcctgctcgccctccacctctccctctccctcgccgcccagttcgaggggttcgactccg 212 |||||||||| || | |||||||| ||||||||||||| |||||||| || | ||||| Sbjct: 73265 tcctgctcgcgctgtccttctccctcaccctcgccgcccacttcgagggctttggctccg 73324 Query: 213 acgagctcccctcctccgccgccggcgacgtcgcgtcctccgacgatgatgacgaggggc 272 |||| |||| |||| || ||||| || | | || | |||||| || |||||||||| Sbjct: 73325 acgacctccactccgcccacgccgacgcggcctcggcagacgacgaagacgacgaggggc 73384 Query: 273 tcgacctcgacctcccgccccctccgcccatctccgtctccgtctccgcgccttcccctc 332 ||||| |||| |||||||| || |||| ||||||| ||||| || | |||||||||| Sbjct: 73385 tcgacgtcgagctcccgccgccgccgcgcatctccctctccacttcaactccttcccctc 73444 Query: 333 ccgtgaccaccacca 347 |||| |||||||||| Sbjct: 73445 ccgtcaccaccacca 73459
>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07, complete sequence Length = 106166 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 395 ccgaatcccaccccctcgctcgatttctgggacgaggacgagttcgagggcatccctgtc 454 ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 37003 ccgaaccccaccccgacgctcgatctctgggacgaggacgagttcgagggcatccctgtc 37062 Query: 455 ccggaagcggcggtctccggcgactcctccgcgccggccgagtccgccccgtcagatccc 514 ||||||||||| ||||| ||| |||||| ||||||| || ||||||||||||||||| Sbjct: 37063 ccggaagcggcctcctccgacgaatcctccacgccggcggaagccgccccgtcagatccc 37122 Score = 109 bits (55), Expect = 9e-21 Identities = 205/255 (80%) Strand = Plus / Plus Query: 93 cctccccatccatggcggcgccgagctggatccggctgccacgcgccaccataatcctgc 152 ||||||| ||||||||| || |||||| |||||||| ||||||||| | || |||| | Sbjct: 36692 cctccccgtccatggcgacggcgagctcgatccggccgccacgcgcggcgctagtcctcc 36751 Query: 153 tcctgctcgccctccacctctccctctccctcgccgcccagttcgaggggttcgactccg 212 |||||||||| || | |||||||| ||||||||||||| |||||||| || | ||||| Sbjct: 36752 tcctgctcgcgctgtccttctccctcaccctcgccgcccacttcgagggctttggctccg 36811 Query: 213 acgagctcccctcctccgccgccggcgacgtcgcgtcctccgacgatgatgacgaggggc 272 |||| |||| |||| || ||||| || | | || | |||||| || |||||||||| Sbjct: 36812 acgacctccactccgcccacgccgacgcggcctcggcagacgacgaagacgacgaggggc 36871 Query: 273 tcgacctcgacctcccgccccctccgcccatctccgtctccgtctccgcgccttcccctc 332 ||||| |||| |||||||| || |||| ||||||| ||||| || | |||||||||| Sbjct: 36872 tcgacgtcgagctcccgccgccgccgcgcatctccctctccacttcaactccttcccctc 36931 Query: 333 ccgtgaccaccacca 347 |||| |||||||||| Sbjct: 36932 ccgtcaccaccacca 36946
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 395 ccgaatcccaccccctcgctcgatttctgggacgaggacgagttcgagggcatccctgtc 454 ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 21058138 ccgaaccccaccccgacgctcgatctctgggacgaggacgagttcgagggcatccctgtc 21058197 Query: 455 ccggaagcggcggtctccggcgactcctccgcgccggccgagtccgccccgtcagatccc 514 ||||||||||| ||||| ||| |||||| ||||||| || ||||||||||||||||| Sbjct: 21058198 ccggaagcggcctcctccgacgaatcctccacgccggcggaagccgccccgtcagatccc 21058257 Score = 109 bits (55), Expect = 9e-21 Identities = 205/255 (80%) Strand = Plus / Plus Query: 93 cctccccatccatggcggcgccgagctggatccggctgccacgcgccaccataatcctgc 152 ||||||| ||||||||| || |||||| |||||||| ||||||||| | || |||| | Sbjct: 21057827 cctccccgtccatggcgacggcgagctcgatccggccgccacgcgcggcgctagtcctcc 21057886 Query: 153 tcctgctcgccctccacctctccctctccctcgccgcccagttcgaggggttcgactccg 212 |||||||||| || | |||||||| ||||||||||||| |||||||| || | ||||| Sbjct: 21057887 tcctgctcgcgctgtccttctccctcaccctcgccgcccacttcgagggctttggctccg 21057946 Query: 213 acgagctcccctcctccgccgccggcgacgtcgcgtcctccgacgatgatgacgaggggc 272 |||| |||| |||| || ||||| || | | || | |||||| || |||||||||| Sbjct: 21057947 acgacctccactccgcccacgccgacgcggcctcggcagacgacgaagacgacgaggggc 21058006 Query: 273 tcgacctcgacctcccgccccctccgcccatctccgtctccgtctccgcgccttcccctc 332 ||||| |||| |||||||| || |||| ||||||| ||||| || | |||||||||| Sbjct: 21058007 tcgacgtcgagctcccgccgccgccgcgcatctccctctccacttcaactccttcccctc 21058066 Query: 333 ccgtgaccaccacca 347 |||| |||||||||| Sbjct: 21058067 ccgtcaccaccacca 21058081 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 27272240 gctccccacctccgccgccggcgacg 27272215 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ccgccgccggcgacgtcgcg 247 |||||||||||||||||||| Sbjct: 22503701 ccgccgccggcgacgtcgcg 22503720
>dbj|AK099260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004C23, full insert sequence Length = 1743 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 395 ccgaatcccaccccctcgctcgatttctgggacgaggacgagttcgagggcatccctgtc 454 ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 411 ccgaaccccaccccgacgctcgatctctgggacgaggacgagttcgagggcatccctgtc 470 Query: 455 ccggaagcggcggtctccggcgactcctccgcgccggccgagtccgccccgtcagatccc 514 ||||||||||| ||||| ||| |||||| ||||||| || ||||||||||||||||| Sbjct: 471 ccggaagcggcctcctccgacgaatcctccacgccggcggaagccgccccgtcagatccc 530 Score = 109 bits (55), Expect = 9e-21 Identities = 205/255 (80%) Strand = Plus / Plus Query: 93 cctccccatccatggcggcgccgagctggatccggctgccacgcgccaccataatcctgc 152 ||||||| ||||||||| || |||||| |||||||| ||||||||| | || |||| | Sbjct: 100 cctccccgtccatggcgacggcgagctcgatccggccgccacgcgcggcgctagtcctcc 159 Query: 153 tcctgctcgccctccacctctccctctccctcgccgcccagttcgaggggttcgactccg 212 |||||||||| || | |||||||| ||||||||||||| |||||||| || | ||||| Sbjct: 160 tcctgctcgcgctgtccttctccctcaccctcgccgcccacttcgagggctttggctccg 219 Query: 213 acgagctcccctcctccgccgccggcgacgtcgcgtcctccgacgatgatgacgaggggc 272 |||| |||| |||| || ||||| || | | || | |||||| || |||||||||| Sbjct: 220 acgacctccactccgcccacgccgacgcggcctcggcagacgacgaagacgacgaggggc 279 Query: 273 tcgacctcgacctcccgccccctccgcccatctccgtctccgtctccgcgccttcccctc 332 ||||| |||| |||||||| || |||| ||||||| ||||| || | |||||||||| Sbjct: 280 tcgacgtcgagctcccgccgccgccgcgcatctccctctccacttcaactccttcccctc 339 Query: 333 ccgtgaccaccacca 347 |||| |||||||||| Sbjct: 340 ccgtcaccaccacca 354
>dbj|AK072299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011H02, full insert sequence Length = 1918 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 395 ccgaatcccaccccctcgctcgatttctgggacgaggacgagttcgagggcatccctgtc 454 ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 344 ccgaaccccaccccgacgctcgatctctgggacgaggacgagttcgagggcatccctgtc 403 Query: 455 ccggaagcggcggtctccggcgactcctccgcgccggccgagtccgccccgtcagatccc 514 ||||||||||| ||||| ||| |||||| ||||||| || ||||||||||||||||| Sbjct: 404 ccggaagcggcctcctccgacgaatcctccacgccggcggaagccgccccgtcagatccc 463 Score = 101 bits (51), Expect = 2e-18 Identities = 204/255 (80%) Strand = Plus / Plus Query: 93 cctccccatccatggcggcgccgagctggatccggctgccacgcgccaccataatcctgc 152 ||||||| || |||||| || |||||| |||||||| ||||||||| | || |||| | Sbjct: 33 cctccccgtcaatggcgacggcgagctcgatccggccgccacgcgcggcgctagtcctcc 92 Query: 153 tcctgctcgccctccacctctccctctccctcgccgcccagttcgaggggttcgactccg 212 |||||||||| || | |||||||| ||||||||||||| |||||||| || | ||||| Sbjct: 93 tcctgctcgcgctgtccttctccctcaccctcgccgcccacttcgagggctttggctccg 152 Query: 213 acgagctcccctcctccgccgccggcgacgtcgcgtcctccgacgatgatgacgaggggc 272 |||| |||| |||| || ||||| || | | || | |||||| || |||||||||| Sbjct: 153 acgacctccactccgcccacgccgacgcggcctcggcagacgacgaagacgacgaggggc 212 Query: 273 tcgacctcgacctcccgccccctccgcccatctccgtctccgtctccgcgccttcccctc 332 ||||| |||| |||||||| || |||| ||||||| ||||| || | |||||||||| Sbjct: 213 tcgacgtcgagctcccgccgccgccgcgcatctccctctccacttcaactccttcccctc 272 Query: 333 ccgtgaccaccacca 347 |||| |||||||||| Sbjct: 273 ccgtcaccaccacca 287
>dbj|AK071117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080D08, full insert sequence Length = 1314 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 395 ccgaatcccaccccctcgctcgatttctgggacgaggacgagttcgagggcatccctgtc 454 ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 418 ccgaaccccaccccgacgctcgatctctgggacgaggacgagttcgagggcatccctgtc 477 Query: 455 ccggaagcggcggtctccggcgactcctccgcgccggccgagtccgccccgtcagatccc 514 ||||||||||| ||||| ||| |||||| ||||||| || ||||||||||||||||| Sbjct: 478 ccggaagcggcctcctccgacgaatcctccacgccggcggaagccgccccgtcagatccc 537 Score = 109 bits (55), Expect = 9e-21 Identities = 205/255 (80%) Strand = Plus / Plus Query: 93 cctccccatccatggcggcgccgagctggatccggctgccacgcgccaccataatcctgc 152 ||||||| ||||||||| || |||||| |||||||| ||||||||| | || |||| | Sbjct: 107 cctccccgtccatggcgacggcgagctcgatccggccgccacgcgcggcgctagtcctcc 166 Query: 153 tcctgctcgccctccacctctccctctccctcgccgcccagttcgaggggttcgactccg 212 |||||||||| || | |||||||| ||||||||||||| |||||||| || | ||||| Sbjct: 167 tcctgctcgcgctgtccttctccctcaccctcgccgcccacttcgagggctttggctccg 226 Query: 213 acgagctcccctcctccgccgccggcgacgtcgcgtcctccgacgatgatgacgaggggc 272 |||| |||| |||| || ||||| || | | || | |||||| || |||||||||| Sbjct: 227 acgacctccactccgcccacgccgacgcggcctcggcagacgacgaagacgacgaggggc 286 Query: 273 tcgacctcgacctcccgccccctccgcccatctccgtctccgtctccgcgccttcccctc 332 ||||| |||| |||||||| || |||| ||||||| ||||| || | |||||||||| Sbjct: 287 tcgacgtcgagctcccgccgccgccgcgcatctccctctccacttcaactccttcccctc 346 Query: 333 ccgtgaccaccacca 347 |||| |||||||||| Sbjct: 347 ccgtcaccaccacca 361
>dbj|AK058468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B07, full insert sequence Length = 1763 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 395 ccgaatcccaccccctcgctcgatttctgggacgaggacgagttcgagggcatccctgtc 454 ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 350 ccgaaccccaccccgacgctcgatctctgggacgaggacgagttcgagggcatccctgtc 409 Query: 455 ccggaagcggcggtctccggcgactcctccgcgccggccgagtccgccccgtcagatccc 514 ||||||||||| ||||| ||| |||||| ||||||| || ||||||||||||||||| Sbjct: 410 ccggaagcggcctcctccgacgaatcctccacgccggcggaagccgccccgtcagatccc 469 Score = 109 bits (55), Expect = 9e-21 Identities = 205/255 (80%) Strand = Plus / Plus Query: 93 cctccccatccatggcggcgccgagctggatccggctgccacgcgccaccataatcctgc 152 ||||||| ||||||||| || |||||| |||||||| ||||||||| | || |||| | Sbjct: 39 cctccccgtccatggcgacggcgagctcgatccggccgccacgcgcggcgctagtcctcc 98 Query: 153 tcctgctcgccctccacctctccctctccctcgccgcccagttcgaggggttcgactccg 212 |||||||||| || | |||||||| ||||||||||||| |||||||| || | ||||| Sbjct: 99 tcctgctcgcgctgtccttctccctcaccctcgccgcccacttcgagggctttggctccg 158 Query: 213 acgagctcccctcctccgccgccggcgacgtcgcgtcctccgacgatgatgacgaggggc 272 |||| |||| |||| || ||||| || | | || | |||||| || |||||||||| Sbjct: 159 acgacctccactccgcccacgccgacgcggcctcggcagacgacgaagacgacgaggggc 218 Query: 273 tcgacctcgacctcccgccccctccgcccatctccgtctccgtctccgcgccttcccctc 332 ||||| |||| |||||||| || |||| ||||||| ||||| || | |||||||||| Sbjct: 219 tcgacgtcgagctcccgccgccgccgcgcatctccctctccacttcaactccttcccctc 278 Query: 333 ccgtgaccaccacca 347 |||| |||||||||| Sbjct: 279 ccgtcaccaccacca 293
>ref|NM_153564.2| Mus musculus guanylate nucleotide binding protein 5 (Gbp5), mRNA Length = 3021 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 158 ctcgccctccacctctccctctccctc 184 |||||||||| |||||||||||||||| Sbjct: 2847 ctcgccctccccctctccctctccctc 2821
>gb|AC123555.4| Mus musculus BAC clone RP23-139L20 from 1, complete sequence Length = 205623 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 162 ccctccacctctccctctccctc 184 ||||||||||||||||||||||| Sbjct: 143000 ccctccacctctccctctccctc 142978
>gb|BC058555.1| Mus musculus guanylate nucleotide binding protein 5, mRNA (cDNA clone MGC:67761 IMAGE:5293575), complete cds Length = 3051 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 158 ctcgccctccacctctccctctccctc 184 |||||||||| |||||||||||||||| Sbjct: 2881 ctcgccctccccctctccctctccctc 2855
>gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 map 14, complete sequence Length = 180338 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 158 ctcgccctccacctctccctctccctc 184 |||||||||| |||||||||||||||| Sbjct: 53831 ctcgccctcctcctctccctctccctc 53805
>emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on chromosome 14, complete sequence Length = 174286 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 158 ctcgccctccacctctccctctccctc 184 |||||||||| |||||||||||||||| Sbjct: 115664 ctcgccctccccctctccctctccctc 115638
>gb|AC102108.12| Mus musculus chromosome 3, clone RP23-100J23, complete sequence Length = 216506 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 158 ctcgccctccacctctccctctccctc 184 |||||||||| |||||||||||||||| Sbjct: 137676 ctcgccctccccctctccctctccctc 137702
>gb|AC145078.2| Mus musculus chromosome 1, clone RP24-439O10, complete sequence Length = 162864 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 158 ctcgccctccacctctccctctccctcgcc 187 ||||||||| ||||||||||||||||||| Sbjct: 57952 ctcgccctctccctctccctctccctcgcc 57981
>ref|NM_125825.2| Arabidopsis thaliana oxoglutarate:malate antiporter AT5G64290 mRNA, complete cds Length = 2125 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 cccatctccgtctccgtctccg 320 |||||||||||||||||||||| Sbjct: 362 cccatctccgtctccgtctccg 383
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 cctctccctctccctcgccgcc 190 |||||||||||||||||||||| Sbjct: 116360 cctctccctctccctcgccgcc 116339
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11 map near 50283S, complete sequence Length = 148306 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 130124 gctccccacctccgccgccggcgacg 130149
>gb|BT015925.1| Arabidopsis thaliana At5g64290 gene, complete cds Length = 1692 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 cccatctccgtctccgtctccg 320 |||||||||||||||||||||| Sbjct: 246 cccatctccgtctccgtctccg 267
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 147208 gctccccacctccgccgccggcgacg 147183
>gb|AC129218.4| Mus musculus BAC clone RP24-471L9 from chromosome 18, complete sequence Length = 188781 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 151 gctcctgctcgccctccacctctccctctccctc 184 |||||||||| ||||| |||||||||||||||| Sbjct: 83477 gctcctgctctccctctccctctccctctccctc 83444
>emb|AL450311.11| Human DNA sequence from clone RP11-343J3 on chromosome 10 Contains the NEUROG3 gene for neurogenin 3 (ngn3, Atoh5, Math4B), a novel gene, an ATP synthase 6 (MTATP6)(ATP6) pseudogene, a cytochrome c oxidase II (MTCO2)(COII) pseudogene, a cytochrome c oxidase I (MTCO1)(COI) pseudogene, a NADH dehydrogenase 2 (MTND2) pseudogene, a NADH dehydrogenase 1 (MTND1) pseudogene, the gene for a novel protein (LOC219738), the 5' end of a novel gene and four CpG islands, complete sequence Length = 165110 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ccctccacctctccctctccct 183 |||||||||||||||||||||| Sbjct: 103291 ccctccacctctccctctccct 103270
>gb|BT000654.1| Arabidopsis thaliana clone RAFL07-09-O18 (R10957) putative 2-oxoglutarate/malate translocator (At5g64290) mRNA, complete cds Length = 2150 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 cccatctccgtctccgtctccg 320 |||||||||||||||||||||| Sbjct: 360 cccatctccgtctccgtctccg 381
>gb|AY056329.1| Arabidopsis thaliana putative 2-oxoglutarate/malate translocator protein (At5g64290) mRNA, complete cds Length = 1968 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 cccatctccgtctccgtctccg 320 |||||||||||||||||||||| Sbjct: 318 cccatctccgtctccgtctccg 339
>gb|AC090094.5| Homo sapiens chromosome 8, clone RP11-252C19, complete sequence Length = 158404 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 gaccaccaccatcactgccgca 358 |||||||||||||||||||||| Sbjct: 43145 gaccaccaccatcactgccgca 43124
>gb|AC067881.5| Homo sapiens chromosome 8, clone RP11-687K23, complete sequence Length = 186676 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 gaccaccaccatcactgccgca 358 |||||||||||||||||||||| Sbjct: 9210 gaccaccaccatcactgccgca 9231
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 13997287 gctccccacctccgccgccggcgacg 13997312 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 169 cctctccctctccctcgccgcc 190 |||||||||||||||||||||| Sbjct: 8901867 cctctccctctccctcgccgcc 8901888 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cccctcctccgccgccggcg 239 |||||||||||||||||||| Sbjct: 28260850 cccctcctccgccgccggcg 28260869
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 19312341 gctccccacctccgccgccggcgacg 19312316 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ccctccacctctccctctcc 181 |||||||||||||||||||| Sbjct: 21833099 ccctccacctctccctctcc 21833080 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gctcccctcctccgccgccg 236 |||||||||||||||||||| Sbjct: 10894331 gctcccctcctccgccgccg 10894350
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 7834516 gctccccacctccgccgccggcgacg 7834491 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 tcccctcctccgccgccggcg 239 ||||||||||||||||||||| Sbjct: 15823488 tcccctcctccgccgccggcg 15823468 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ctccacctctccctctccct 183 |||||||||||||||||||| Sbjct: 16533565 ctccacctctccctctccct 16533584
>emb|BX832394.1|CNS0A28A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1908 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 cccatctccgtctccgtctccg 320 |||||||||||||||||||||| Sbjct: 338 cccatctccgtctccgtctccg 359
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 48898 gctccccacctccgccgccggcgacg 48873
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 147014 gctccccacctccgccgccggcgacg 146989
>dbj|AB008268.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSJ1 Length = 83594 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 cccatctccgtctccgtctccg 320 |||||||||||||||||||||| Sbjct: 41181 cccatctccgtctccgtctccg 41160
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 41784 gctccccacctccgccgccggcgacg 41759
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 85354 gctccccacctccgccgccggcgacg 85329
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 gctcccctcctccgccgccggcgacg 242 ||||||| |||||||||||||||||| Sbjct: 14079289 gctccccacctccgccgccggcgacg 14079314 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 169 cctctccctctccctcgccgcc 190 |||||||||||||||||||||| Sbjct: 8973530 cctctccctctccctcgccgcc 8973551 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cccctcctccgccgccggcg 239 |||||||||||||||||||| Sbjct: 28245429 cccctcctccgccgccggcg 28245448
>gb|AC151406.2| Mus musculus BAC clone RP23-47J5 from 18, complete sequence Length = 230518 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 151 gctcctgctcgccctccacctctccctctccctc 184 |||||||||| ||||| |||||||||||||||| Sbjct: 149053 gctcctgctctccctctccctctccctctccctc 149020
>emb|AL954347.10| Mouse DNA sequence from clone RP23-438I5 on chromosome 2, complete sequence Length = 123289 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 147 tcctgctcctgctcgccctccacctctccctctccctc 184 |||| ||||| ||| |||||| |||||||||||||||| Sbjct: 60928 tcctcctcctcctccccctccccctctccctctccctc 60891
>dbj|AP000437.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-39H21, complete sequence Length = 150125 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 158 ctcgccctccacctctccctctccctcgcc 187 ||||||||| ||||||||||||||||||| Sbjct: 90392 ctcgccctctccctctccctctccctcgcc 90363
>gb|AC117698.19| Mus musculus chromosome 5, clone RP23-451A12, complete sequence Length = 180809 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 ctcctgctcgccctccacctctccctctccctc 184 ||||| ||| |||||| |||||||||||||||| Sbjct: 8959 ctcctcctccccctccccctctccctctccctc 8991
>ref|XM_527632.1| PREDICTED: Pan troglodytes similar to family with sequence similarity 20, member C; IMAGE:4942737 (LOC472257), mRNA Length = 1197 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cctcctccgccgccggcgacg 242 ||||||||||||||||||||| Sbjct: 218 cctcctccgccgccggcgacg 238
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 ctcgccgcccagttcgaggggttcg 206 |||||||||||||||||| |||||| Sbjct: 2563041 ctcgccgcccagttcgagcggttcg 2563065
>gb|AY674636.1| Stachystemon axillaris 18S ribosomal RNA gene, partial sequence Length = 1738 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1682 tccgccgccggcgacgtcgcg 1702
>gb|AY674628.1| Pimelodendron zoanthogyne 18S ribosomal RNA gene, partial sequence Length = 1712 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1669 tccgccgccggcgacgtcgcg 1689
>gb|AY674622.1| Omphalea diandra 18S ribosomal RNA gene, partial sequence Length = 1709 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1665 tccgccgccggcgacgtcgcg 1685
>gb|AY674618.1| Microdesmis pierlotiana 18S ribosomal RNA gene, partial sequence Length = 1700 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1664 tccgccgccggcgacgtcgcg 1684
>gb|AY674614.1| Lophopyxis maingayi 18S ribosomal RNA gene, partial sequence Length = 1705 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1665 tccgccgccggcgacgtcgcg 1685
>gb|AY674610.1| Klainedoxa gabonensis 18S ribosomal RNA gene, partial sequence Length = 1708 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1668 tccgccgccggcgacgtcgcg 1688
>gb|BC040074.1| Homo sapiens family with sequence similarity 20, member C, mRNA (cDNA clone MGC:47858 IMAGE:4942737), complete cds Length = 2632 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cctcctccgccgccggcgacg 242 ||||||||||||||||||||| Sbjct: 305 cctcctccgccgccggcgacg 325
>gb|AY968393.1| Combretocarpus rotundatus 18S ribosomal RNA gene, partial sequence Length = 1771 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1669 tccgccgccggcgacgtcgcg 1689
>ref|NM_020223.1| Homo sapiens family with sequence similarity 20, member C (FAM20C), mRNA Length = 2632 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cctcctccgccgccggcgacg 242 ||||||||||||||||||||| Sbjct: 305 cctcctccgccgccggcgacg 325
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ctctccctctccctcgccgcc 190 ||||||||||||||||||||| Sbjct: 35526505 ctctccctctccctcgccgcc 35526525
>gb|AC125065.3| Mus musculus BAC clone RP23-430G6 from chromosome 5, complete sequence Length = 205734 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 152 ctcctgctcgccctccacctctccctctccctc 184 ||||| ||| |||||| |||||||||||||||| Sbjct: 15367 ctcctcctccccctccccctctccctctccctc 15335
>gb|AC004626.1|HUAC004626 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-427H10, complete sequence Length = 157838 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacctctccctctccctc 184 ||||||||||||||||||||| Sbjct: 46915 ctccacctctccctctccctc 46895
>gb|AC093686.6| Homo sapiens BAC clone RP11-713A20 from 7, complete sequence Length = 189854 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cctcctccgccgccggcgacg 242 ||||||||||||||||||||| Sbjct: 179690 cctcctccgccgccggcgacg 179710
>gb|AC093627.4| Homo sapiens BAC clone RP11-90P13 from 7, complete sequence Length = 179269 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cctcctccgccgccggcgacg 242 ||||||||||||||||||||| Sbjct: 169105 cctcctccgccgccggcgacg 169125
>emb|AL513325.13| Human DNA sequence from clone RP11-332L8 on chromosome 1 Contains an H+ transporting ATPase lysosomal accessory protein 2 (ATP6AP2) pseudogene, the 5' end o the CRB1 gene for crumbs homolog 1 (Drosophila) and a mitochondrial ribosomal protein S21 (MRPS21) pseudogene, complete sequence Length = 212888 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 156 tgctcgccctccacctctccctctccctc 184 ||||||||||| |||||||||||||||| Sbjct: 197617 tgctcgccctcgccctctccctctccctc 197645
>gb|AF533706.1| Homo sapiens tissue-type brain unknown protein mRNA, complete cds Length = 2326 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cctcctccgccgccggcgacg 242 ||||||||||||||||||||| Sbjct: 449 cctcctccgccgccggcgacg 469
>emb|AL354816.5| Human DNA sequence from clone RP11-540M5 on chromosome 13 Contains the 3' end of the NUFIP1 gene for nuclear fragile X mental retardation protein interacting protein 1, complete sequence Length = 159285 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 ctgctccccgcctccccatcc 103 ||||||||||||||||||||| Sbjct: 138008 ctgctccccgcctccccatcc 138028
>emb|AL132766.13|HSJ433F14 Human DNA sequence from clone RP3-433F14 on chromosome 6q15-16.3 Contains a pseudogene similar to part of mitochondrial cytochrome C oxidase I and a pseudogene similar to part of NADH dehydrogenase 4L (MTND4L), complete sequence Length = 144984 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ctccacctctccctctccctc 184 ||||||||||||||||||||| Sbjct: 105645 ctccacctctccctctccctc 105665
>ref|XM_777030.1| PREDICTED: Strongylocentrotus purpuratus similar to ADP-ribosylation factor GTPase activating protein 1 (LOC576757), mRNA Length = 972 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 152 ctcctgctcgccctccacctctccctctccctc 184 ||||| ||| ||||||||||| ||||||||||| Sbjct: 481 ctcctcctccccctccacctccccctctccctc 449
>gb|AC130459.2| Homo sapiens chromosome 16 clone CTA-427H10, complete sequence Length = 157462 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ctccacctctccctctccctc 184 ||||||||||||||||||||| Sbjct: 110924 ctccacctctccctctccctc 110944
>gb|AY955811.1| Baikiaea insignis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 860 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 21 tccgccgccggcgacgtcgcg 41
>gb|AY955802.1| Guibourtia hymenaeifolia 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 818 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 21 tccgccgccggcgacgtcgcg 41
>gb|AY955799.1| Peltogyne pauciflora 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 822 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 21 tccgccgccggcgacgtcgcg 41
>gb|AY955797.1| Peltogyne paniculata subsp. pubescens 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 809 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 12 tccgccgccggcgacgtcgcg 32
>gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8 Length = 265786 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 ctctctgctccccgcctccccatcc 103 |||||| |||||||||||||||||| Sbjct: 11689 ctctctcctccccgcctccccatcc 11713
>gb|AY788159.1| Tetrorchidium sp. Bell 93-204 18S ribosomal RNA gene, partial sequence Length = 1712 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1669 tccgccgccggcgacgtcgcg 1689
>gb|AY788154.1| Paradrypetes subintegrifolia 18S ribosomal RNA gene, partial sequence Length = 1712 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1671 tccgccgccggcgacgtcgcg 1691
>gb|AY788150.1| Durandea pentagyna 18S ribosomal RNA gene, partial sequence Length = 1710 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1667 tccgccgccggcgacgtcgcg 1687
>gb|AF469770.1| Cananga odorata 18S ribosomal RNA gene, complete sequence Length = 1726 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1673 tccgccgccggcgacgtcgcg 1693
>gb|AY081193.1| Homo sapiens somatostatin receptor subtype 5 gene, exons 1a and 1 and complete cds Length = 10494 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 ctctctgctccccgcctccccatcc 103 |||||| |||||||||||||||||| Sbjct: 5184 ctctctcctccccgcctccccatcc 5208
>gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence Length = 185378 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctccg 320 ||||||||||||||||||||| Sbjct: 82028 ccatctccgtctccgtctccg 82048
>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167344 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctccg 320 ||||||||||||||||||||| Sbjct: 160287 ccatctccgtctccgtctccg 160307
>dbj|AB186899.1| Nicotiana tabacum ZFT1 mRNA for Cys2-His2 type zinc finger protein, complete cds Length = 891 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 cctcctccgccgccggcgacg 242 ||||||||||||||||||||| Sbjct: 431 cctcctccgccgccggcgacg 411
>gb|AY929370.1| Lacistema aggregatum 18S ribosomal RNA gene, partial sequence Length = 1738 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1670 tccgccgccggcgacgtcgcg 1690
>gb|AY929361.1| Ruptiliocarpon caracolito 18S ribosomal RNA gene, partial sequence Length = 1750 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1667 tccgccgccggcgacgtcgcg 1687
>gb|AY929360.1| Quetzalia occidentalis 18S ribosomal RNA gene, partial sequence Length = 1781 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1679 tccgccgccggcgacgtcgcg 1699
>ref|XM_928334.1| PREDICTED: Homo sapiens family with sequence similarity 20, member C (FAM20C), mRNA Length = 1885 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cctcctccgccgccggcgacg 242 ||||||||||||||||||||| Sbjct: 443 cctcctccgccgccggcgacg 463
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 411 cgctcgatttctgggacgaggacga 435 |||||||||||| |||||||||||| Sbjct: 141244 cgctcgatttctcggacgaggacga 141220
>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170988 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctccg 320 ||||||||||||||||||||| Sbjct: 51173 ccatctccgtctccgtctccg 51193
>gb|AF293757.1| Cryptocarya meissneriana 18S ribosomal RNA gene, partial sequence Length = 1787 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1703 tccgccgccggcgacgtcgcg 1723
>gb|AF207047.1| Trigonia nivea 18S ribosomal RNA gene, complete sequence Length = 1730 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1680 tccgccgccggcgacgtcgcg 1700
>gb|AF206979.1| Pangium edule 18S ribosomal RNA gene, complete sequence Length = 1738 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1682 tccgccgccggcgacgtcgcg 1702
>gb|AF206968.1| Myristica fragrans 18S ribosomal RNA gene, complete sequence Length = 1794 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1692 tccgccgccggcgacgtcgcg 1712
>gb|AF206962.1| Mesua sp. Chase 677 18S ribosomal RNA gene, complete sequence Length = 1740 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1684 tccgccgccggcgacgtcgcg 1704
>gb|AF206946.1| Knema latericia 18S ribosomal RNA gene, complete sequence Length = 1733 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1678 tccgccgccggcgacgtcgcg 1698
>gb|AF206937.1| Idiospermum australiense 18S ribosomal RNA gene, complete sequence Length = 1739 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1684 tccgccgccggcgacgtcgcg 1704
>gb|AF206930.1| Humiria balsamifera 18S ribosomal RNA gene, complete sequence Length = 1743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1686 tccgccgccggcgacgtcgcg 1706
>gb|AF206850.1| Annona muricata 18S ribosomal RNA gene, complete sequence Length = 1665 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1609 tccgccgccggcgacgtcgcg 1629
>gb|DQ007409.1| Mauloutchia chapelieri 18S ribosomal RNA gene, partial sequence Length = 1712 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1671 tccgccgccggcgacgtcgcg 1691
>gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, region 85A-85B, BAC clone BACR03F16, complete sequence Length = 204681 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctccg 320 ||||||||||||||||||||| Sbjct: 189431 ccatctccgtctccgtctccg 189451
>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone BACR33N15, complete sequence Length = 187701 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctccg 320 ||||||||||||||||||||| Sbjct: 62868 ccatctccgtctccgtctccg 62888
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctccg 320 ||||||||||||||||||||| Sbjct: 21405593 ccatctccgtctccgtctccg 21405613
>gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, complete sequence Length = 162342 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 ctctctgctccccgcctccccatcc 103 |||||| |||||||||||||||||| Sbjct: 146473 ctctctcctccccgcctccccatcc 146497
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ctctccctctccctcgccgcc 190 ||||||||||||||||||||| Sbjct: 35616577 ctctccctctccctcgccgcc 35616597
>gb|AF528448.1| Hypochaeris grandiflora isolate 1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 825 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 24 tccgccgccggcgacgtcgcg 44
>gb|AC109135.2| Homo sapiens chromosome 1 clone RP11-240C17, complete sequence Length = 175099 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ctccacctctccctctccctc 184 ||||||||||||||||||||| Sbjct: 69902 ctccacctctccctctccctc 69922
>gb|AC073881.3|AC073881 Homo sapiens chromosome 15 clone CTD-2169K18 map 15q21.3, complete sequence Length = 125463 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 cccatctccgtctccgtctcc 319 ||||||||||||||||||||| Sbjct: 64542 cccatctccgtctccgtctcc 64522
>gb|AC137788.3| Homo sapiens chromosome 16 clone RP11-207M10, complete sequence Length = 158420 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ctccacctctccctctccctc 184 ||||||||||||||||||||| Sbjct: 146574 ctccacctctccctctccctc 146594
>gb|AC136634.2| Homo sapiens chromosome 16 clone RP11-95C20, complete sequence Length = 176981 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacctctccctctccctc 184 ||||||||||||||||||||| Sbjct: 11845 ctccacctctccctctccctc 11825
>gb|AC138625.1| Homo sapiens chromosome 16 clone RP11-23E19, complete sequence Length = 152884 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ctccacctctccctctccctc 184 ||||||||||||||||||||| Sbjct: 93314 ctccacctctccctctccctc 93334
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ctctccctctccctcgccgcc 190 ||||||||||||||||||||| Sbjct: 59468 ctctccctctccctcgccgcc 59488
>gb|AC069141.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-23G24, complete sequence Length = 197264 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccg 320 ||||||||||||||||||||| Sbjct: 97682 ccatctccgtctccgtctccg 97662
>gb|AF513698.1| Oddoniodendron normandii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 837 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 21 tccgccgccggcgacgtcgcg 41
>gb|AF513697.1| Microberlinia brazzavillensis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 800 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 21 tccgccgccggcgacgtcgcg 41
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctccg 320 ||||||||||||||||||||| Sbjct: 22698 ccatctccgtctccgtctccg 22718
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 tcccctcctccgccgccggcg 239 ||||||||||||||||||||| Sbjct: 36491 tcccctcctccgccgccggcg 36471
>dbj|AB120192.1| Clematis tashiroi genes 18S rRNA, ITS1, 5.8S rRNA, ITS2, 26S rRNA, partial and complete sequence Length = 667 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 12 tccgccgccggcgacgtcgcg 32
>gb|AC020647.9|AC020647 Homo sapiens 12 BAC RP11-922O23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147720 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cctgctcctgctcgccctcca 168 ||||||||||||||||||||| Sbjct: 28180 cctgctcctgctcgccctcca 28200
>dbj|AK059425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E07, full insert sequence Length = 864 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ctctccctctccctcgccgcc 190 ||||||||||||||||||||| Sbjct: 29 ctctccctctccctcgccgcc 49
>gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16 of 118 of the complete sequence Length = 244757 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccg 320 ||||||||||||||||||||| Sbjct: 199013 ccatctccgtctccgtctccg 198993
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete sequence Length = 265524 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctccg 320 ||||||||||||||||||||| Sbjct: 171325 ccatctccgtctccgtctccg 171345
>gb|AC159104.2| Mus musculus BAC clone RP23-246E2 from chromosome 13, complete sequence Length = 203694 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 152 ctcctgctcgccctccacctctccctctccctc 184 ||||||||| ||||| |||||||||||||||| Sbjct: 63179 ctcctgctctccctctccctctccctctccctc 63147
>gb|AC154246.3| Mus musculus BAC clone RP24-329G5 from chromosome 13, complete sequence Length = 177214 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 ctcctgctcgccctccacctctccctctccctc 184 ||||||||| ||||| |||||||||||||||| Sbjct: 62655 ctcctgctctccctctccctctccctctccctc 62687
>gb|U42798.1|CUU42798 Coccoloba uvifera 18S ribosomal RNA gene, partial sequence Length = 1739 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1685 tccgccgccggcgacgtcgcg 1705
>gb|U42534.1|DRU42534 Drypetes roxburghii 18S ribosomal RNA gene, partial sequence Length = 1738 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1684 tccgccgccggcgacgtcgcg 1704
>emb|AJ235981.1|LCH235981 Liriodendron chinense 18S rRNA gene Length = 1765 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tccgccgccggcgacgtcgcg 247 ||||||||||||||||||||| Sbjct: 1710 tccgccgccggcgacgtcgcg 1730
>emb|AL031706.17|HS305F3 Human DNA sequence from clone LA16-305F3 on chromosome 16. Contains two putative CpG islands, complete sequence Length = 13012 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 ctctctgctccccgcctccccatcc 103 |||||| |||||||||||||||||| Sbjct: 10304 ctctctcctccccgcctccccatcc 10328
>gb|AC130414.3| Homo sapiens 12 BAC RP11-15P10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 47422 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cctgctcctgctcgccctcca 168 ||||||||||||||||||||| Sbjct: 10331 cctgctcctgctcgccctcca 10311
>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence Length = 190298 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cctccacctctccctctccc 182 |||||||||||||||||||| Sbjct: 25302 cctccacctctccctctccc 25321
>ref|NM_188249.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2046 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ctctccctctccctcgccgc 189 |||||||||||||||||||| Sbjct: 1279 ctctccctctccctcgccgc 1298
>ref|NM_188235.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 831 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 cctcctccgccgccggcgacgtcg 245 ||||||||||||||| |||||||| Sbjct: 407 cctcctccgccgccgccgacgtcg 430
>ref|XM_481240.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2332 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gctcccctcctccgccgccg 236 |||||||||||||||||||| Sbjct: 685 gctcccctcctccgccgccg 704
>ref|XM_482677.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2627 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ccctccacctctccctctcc 181 |||||||||||||||||||| Sbjct: 260 ccctccacctctccctctcc 279
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 gggctcgacctcgacctcccgccc 292 |||||||||||||||||| ||||| Sbjct: 96038 gggctcgacctcgacctcgcgccc 96061
>ref|XM_463678.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1188 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctccgtctccgcgccttcccctcc 333 |||||||||||||||||| ||||| Sbjct: 826 ctccgtctccgcgccttcgcctcc 803
>ref|XM_463674.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1821 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ctcctccgccgccggcgacg 242 |||||||||||||||||||| Sbjct: 180 ctcctccgccgccggcgacg 199
>ref|NM_032070.1| Rattus norvegicus high mobility group AT-hook 2 (Hmga2), mRNA Length = 802 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cctccacctctccctctccctcgc 186 |||||| ||||||||||||||||| Sbjct: 38 cctccaactctccctctccctcgc 61
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctccgcgccttcccctcccg 335 |||||||||||||||||||| Sbjct: 2793900 ctccgcgccttcccctcccg 2793919
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cccctcctccgccgccggcg 239 |||||||||||||||||||| Sbjct: 65652 cccctcctccgccgccggcg 65671
>ref|XM_417011.1| PREDICTED: Gallus gallus similar to COMM domain containing 6 isoform b; Acrg embryonic lethality (mouse) minimal region ortholog; AK000009 gene (LOC418816), mRNA Length = 2344 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cctcccgccccctccgccca 302 |||||||||||||||||||| Sbjct: 87 cctcccgccccctccgccca 106
>gb|AC091806.4| Homo sapiens chromosome X clone RP11-320G24 map p11.4, complete sequence Length = 182440 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 ccctccacctctccctctccctcg 185 |||||| ||||||||||||||||| Sbjct: 72577 ccctccccctctccctctccctcg 72554
>gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p11.4, complete sequence Length = 218733 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 ccctccacctctccctctccctcg 185 |||||| ||||||||||||||||| Sbjct: 141501 ccctccccctctccctctccctcg 141478
>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24, Map qA7.1, complete sequences Length = 393632 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 169 cctctccctctccctcgccgcccagttc 196 |||||||||||||||| || |||||||| Sbjct: 391824 cctctccctctccctctcctcccagttc 391797
>gb|AC124211.2| Mus musculus chromosome X clone CT7-497M13 map qA7.1, complete sequence Length = 114873 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 169 cctctccctctccctcgccgcccagttc 196 |||||||||||||||| || |||||||| Sbjct: 42896 cctctccctctccctctcctcccagttc 42869
>gb|AC121313.8| Mus musculus chromosome 14, clone RP24-395N22, complete sequence Length = 131620 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ccctccacctctccctctcc 181 |||||||||||||||||||| Sbjct: 96913 ccctccacctctccctctcc 96932
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ccgccgccggcgacgtcgcg 247 |||||||||||||||||||| Sbjct: 93108 ccgccgccggcgacgtcgcg 93127
>gb|AC147163.2| Mus musculus BAC clone RP24-317B17 from chromosome Y, complete sequence Length = 208700 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 55611 ccatctccgtctccgtctcc 55592
>ref|XM_989726.1| PREDICTED: Mus musculus similar to myosin, heavy polypeptide 4, skeletal muscle (LOC671894), mRNA Length = 5573 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccgcgc 323 |||||||| ||||||||||||||| Sbjct: 2774 ccatctccttctccgtctccgcgc 2751
>gb|AC145593.3| Mus musculus BAC clone RP24-186P6 from chromosome Y, complete sequence Length = 162710 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 102591 ccatctccgtctccgtctcc 102610
>gb|AC132341.4| Mus musculus BAC clone RP24-168C11 from chromosome Y, complete sequence Length = 142720 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 40676 ccatctccgtctccgtctcc 40695
>gb|AC140427.3| Mus musculus BAC clone RP24-173G7 from chromosome Y, complete sequence Length = 182766 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 157754 ccatctccgtctccgtctcc 157735
>gb|AC145564.4| Mus musculus BAC clone RP24-482K19 from chromosome Y, complete sequence Length = 188188 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 152878 ccatctccgtctccgtctcc 152859
>gb|AC109495.4| Homo sapiens chromosome 16 clone RP11-916L7, complete sequence Length = 120065 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 gctcgccctccacctctccctctccctc 184 |||| ||||| ||||||||||||||||| Sbjct: 84171 gctctccctctacctctccctctccctc 84198
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 215 gagctcccctcctccgccgccggcgacg 242 |||||| ||||||||| ||||||||||| Sbjct: 79953 gagctcacctcctccggcgccggcgacg 79980
>gb|AC156941.3| Mus musculus BAC clone RP23-25D8 from chromosome 14, complete sequence Length = 214940 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 188343 ccatctccgtctccgtctcc 188362
>gb|AC108436.5| Mus musculus chromosome 8, clone RP23-230G11, complete sequence Length = 185534 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ccctccacctctccctctcc 181 |||||||||||||||||||| Sbjct: 160858 ccctccacctctccctctcc 160877
>gb|AC103576.8| Rattus norvegicus 12 BAC CH230-63N13 (Children's Hospital Oakland Research Institute) complete sequence Length = 219287 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 gcaaaccctagccttaaccc 375 |||||||||||||||||||| Sbjct: 141422 gcaaaccctagccttaaccc 141441
>emb|AL160171.27| Human DNA sequence from clone RP11-256E16 on chromosome 1 Contains a novel gene, a novel gene (FLJ30525), the 5' end of a novel gene (FLJ10330) and a CpG island, complete sequence Length = 161273 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 gctcgccctccacctctccctctccctc 184 |||| ||||| ||||||||||||||||| Sbjct: 137622 gctctccctctacctctccctctccctc 137649
>gb|AY114294.1|AY114294S1 Mus musculus beta-carotene 15,15'-monooxygenase (Bcdo) gene, exons 1, 2, and 3 Length = 14081 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ccctccacctctccctctcc 181 |||||||||||||||||||| Sbjct: 11586 ccctccacctctccctctcc 11605
>emb|AL034402.9|HS30G7 Human DNA sequence from clone RP1-30G7 on chromosome Xp11.3-11.4 Contains a novel gene, an actin, beta (ACTB) pseudogene and a CpG island, complete sequence Length = 123637 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 149 ctgctcctgctcgccctccacctctccctctccctc 184 |||||| ||||| ||||| |||||||||||||||| Sbjct: 66034 ctgctcttgctctccctctccctctccctctccctc 65999
>ref|XM_788998.1| PREDICTED: Strongylocentrotus purpuratus similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (LOC589355), mRNA Length = 4467 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 ctcctgctcgccctccacctctccctct 179 ||||||||| | |||||||||||||||| Sbjct: 3585 ctcctgctctctctccacctctccctct 3558
>emb|CR388002.6| Zebrafish DNA sequence from clone DKEY-75M8 in linkage group 1, complete sequence Length = 228120 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcgccctccacctctccctc 178 |||||||||||||||||||| Sbjct: 191234 tcgccctccacctctccctc 191215
>emb|CR376771.10| Zebrafish DNA sequence from clone DKEY-160I7 in linkage group 1, complete sequence Length = 178445 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 359 aaccctagccttaaccccaacccc 382 ||||||| |||||||||||||||| Sbjct: 14026 aaccctaaccttaaccccaacccc 14003
>ref|XM_780160.1| PREDICTED: Strongylocentrotus purpuratus similar to Signal-induced proliferation-associated 1 like protein 1 (High-risk human papilloma viruses E6 oncoproteins targeted protein 1) (E6-targeted protein 1) (LOC580086), mRNA Length = 4923 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 ccaaccccgcgaccacgccc 394 |||||||||||||||||||| Sbjct: 4187 ccaaccccgcgaccacgccc 4206
>emb|X70881.1|HVMYB3G H.vulgare myb3 gene Length = 3241 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cctctccctctccctcgccg 188 |||||||||||||||||||| Sbjct: 882 cctctccctctccctcgccg 901
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tctccctctccctcgccgcc 190 |||||||||||||||||||| Sbjct: 104152 tctccctctccctcgccgcc 104171
>gb|AC174232.4| Mus musculus BAC clone RP24-66G1 from chromosome y, complete sequence Length = 196032 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 95664 ccatctccgtctccgtctcc 95645
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 tctccctctccctcgccgcc 190 |||||||||||||||||||| Sbjct: 120195 tctccctctccctcgccgcc 120176
>emb|BX927297.12| Zebrafish DNA sequence from clone DKEY-238M4 in linkage group 16, complete sequence Length = 132039 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cctccacctctccctctccc 182 |||||||||||||||||||| Sbjct: 109498 cctccacctctccctctccc 109517
>gb|AC121342.6| Homo sapiens X BAC RP11-86A5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 118301 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 97196 ccatctccgtctccgtctcc 97215
>gb|AC132294.4| Mus musculus BAC clone RP24-324F17 from chromosome y, complete sequence Length = 174347 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 121374 ccatctccgtctccgtctcc 121393
>tpg|BK002733.1| TPA: TPA_inf: Drosophila melanogaster HDC14861 (HDC14861) gene, complete cds Length = 429 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 89 ccatctccgtctccgtctcc 70
>gb|AC182448.2| Mus musculus BAC clone RP24-490J20 from chromosome y, complete sequence Length = 222797 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 159394 ccatctccgtctccgtctcc 159375
>gb|AC174478.3| Mus musculus BAC clone RP24-72B9 from chromosome y, complete sequence Length = 186313 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 37306 ccatctccgtctccgtctcc 37287
>gb|AC182730.2| Mus musculus BAC clone RP24-254G5 from chromosome y, complete sequence Length = 162064 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 56071 ccatctccgtctccgtctcc 56090
>gb|AC106792.2| Homo sapiens chromosome 5 clone RP11-403M22, complete sequence Length = 84297 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 ggctcgacctcgacctcccg 289 |||||||||||||||||||| Sbjct: 34577 ggctcgacctcgacctcccg 34596
>dbj|AK137508.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830121K03 product:myosin, heavy polypeptide 7, cardiac muscle, beta, full insert sequence Length = 3706 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccgcgc 323 |||||||| ||||||||||||||| Sbjct: 2085 ccatctccttctccgtctccgcgc 2062
>dbj|AK147031.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920089F07 product:myosin, heavy polypeptide 7, cardiac muscle, beta, full insert sequence Length = 6055 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccgcgc 323 |||||||| ||||||||||||||| Sbjct: 2690 ccatctccttctccgtctccgcgc 2667
>gb|AC106767.2| Homo sapiens chromosome 5 clone RP11-269M17, complete sequence Length = 143792 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ggctcgacctcgacctcccg 289 |||||||||||||||||||| Sbjct: 139895 ggctcgacctcgacctcccg 139876
>dbj|AK157742.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130014J15 product:myosin, heavy polypeptide 7, cardiac muscle, beta, full insert sequence Length = 3118 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccgcgc 323 |||||||| ||||||||||||||| Sbjct: 2690 ccatctccttctccgtctccgcgc 2667
>ref|XM_684828.1| PREDICTED: Danio rerio similar to Cingulin (LOC561423), mRNA Length = 3705 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cctccacctctccctctccc 182 |||||||||||||||||||| Sbjct: 623 cctccacctctccctctccc 604
>dbj|AK168677.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920043K12 product:myosin, heavy polypeptide 7, cardiac muscle, beta, full insert sequence Length = 4085 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccgcgc 323 |||||||| ||||||||||||||| Sbjct: 720 ccatctccttctccgtctccgcgc 697
>dbj|AK168593.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920037G08 product:myosin, heavy polypeptide 7, cardiac muscle, beta, full insert sequence Length = 3823 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccgcgc 323 |||||||| ||||||||||||||| Sbjct: 459 ccatctccttctccgtctccgcgc 436
>gb|AC174221.4| Mus musculus BAC clone RP24-237K1 from chromosome y, complete sequence Length = 171789 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 20892 ccatctccgtctccgtctcc 20911
>dbj|AK169371.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920193B18 product:myosin, heavy polypeptide 7, cardiac muscle, beta, full insert sequence Length = 6054 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccgcgc 323 |||||||| ||||||||||||||| Sbjct: 2689 ccatctccttctccgtctccgcgc 2666
>emb|BX511211.6| Zebrafish DNA sequence from clone DKEY-41G3 in linkage group 1, complete sequence Length = 191183 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcgccctccacctctccctc 178 |||||||||||||||||||| Sbjct: 182330 tcgccctccacctctccctc 182349
>dbj|AK169198.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920089H17 product:myosin, heavy polypeptide 7, cardiac muscle, beta, full insert sequence Length = 6054 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccgcgc 323 |||||||| ||||||||||||||| Sbjct: 2689 ccatctccttctccgtctccgcgc 2666
>gb|AY395261.1| Haemaphysalis leporispalustris calreticulin gene, partial cds Length = 1125 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 ggacgaggacgagttcgagg 443 |||||||||||||||||||| Sbjct: 1023 ggacgaggacgagttcgagg 1042
>gb|AC159007.2| Mus musculus BAC clone RP23-9O3 from chromosome 14, complete sequence Length = 172108 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 75474 ccatctccgtctccgtctcc 75493
>gb|L34078.1|MUSXRCC1G Mus musculus DNA repair protein (XRCC1) gene, partial sequence Length = 37349 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ccctccacctctccctctcc 181 |||||||||||||||||||| Sbjct: 6637 ccctccacctctccctctcc 6656
>gb|AC181976.2| Mus musculus BAC clone RP24-413C10 from chromosome y, complete sequence Length = 150838 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 72563 ccatctccgtctccgtctcc 72582
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ccgccgccggcgacgtcgcg 247 |||||||||||||||||||| Sbjct: 2447683 ccgccgccggcgacgtcgcg 2447702
>gb|AC105061.16| Mus musculus chromosome 19, clone RP23-117I10, complete sequence Length = 210038 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cctccacctctccctctccc 182 |||||||||||||||||||| Sbjct: 155738 cctccacctctccctctccc 155757
>gb|AC008090.3|AC008090 Drosophila melanogaster, chromosome 3R, region 93E-93F, BAC clone BACR16N15, complete sequence Length = 172390 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 138025 ccatctccgtctccgtctcc 138006
>dbj|AK040973.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530053K13 product:myosin, heavy polypeptide 7, cardiac muscle, beta, full insert sequence Length = 3036 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctccgcgc 323 |||||||| ||||||||||||||| Sbjct: 2691 ccatctccttctccgtctccgcgc 2668
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tctccctctccctcgccgcc 190 |||||||||||||||||||| Sbjct: 35167640 tctccctctccctcgccgcc 35167659 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 215 gagctcccctcctccgccgccggcgacg 242 |||||| ||||||||| ||||||||||| Sbjct: 21266479 gagctcacctcctccggcgccggcgacg 21266506
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ccgacgagctcccctcctcc 229 |||||||||||||||||||| Sbjct: 23036838 ccgacgagctcccctcctcc 23036857
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctcctccgccgccggcgacg 242 |||||||||||||||||||| Sbjct: 354225 ctcctccgccgccggcgacg 354206
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 ctccgtctccgcgccttcccctcc 333 |||||||||||||||||| ||||| Sbjct: 40598969 ctccgtctccgcgccttcgcctcc 40598992 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctccgtctccgcgccttcccctcc 333 |||||||||||||||||| ||||| Sbjct: 40598650 ctccgtctccgcgccttcgcctcc 40598627 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctcctccgccgccggcgacg 242 |||||||||||||||||||| Sbjct: 40583359 ctcctccgccgccggcgacg 40583340 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ctctccctctccctcgccgc 189 |||||||||||||||||||| Sbjct: 5230555 ctctccctctccctcgccgc 5230536 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 cctcctccgccgccggcgacgtcg 245 ||||||||||||||| |||||||| Sbjct: 5139590 cctcctccgccgccgccgacgtcg 5139567
>gb|AC008142.2|AC008142 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone BACR48D03, complete sequence Length = 175917 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 64832 ccatctccgtctccgtctcc 64851
>dbj|AB201255.1| Zea mays NADP-ME gene for NADP-malic enzyme, partial cds Length = 697 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tctccgtctccgtctccgcg 322 |||||||||||||||||||| Sbjct: 696 tctccgtctccgtctccgcg 677
>gb|AC157212.2| Mus musculus BAC clone RP23-171A13 from chromosome 14, complete sequence Length = 217099 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctccgcgc 323 |||||||| ||||||||||||||| Sbjct: 33147 ccatctccttctccgtctccgcgc 33170
>gb|AC137695.3| Homo sapiens 3 BAC RP13-685P2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138278 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 153 tcctgctcgccctccacctctccctctccctc 184 |||||||| ||||| |||||||||||||||| Sbjct: 120695 tcctgctctccctctccctctccctctccctc 120664
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 ctccgtctccgcgccttcccctcc 333 |||||||||||||||||| ||||| Sbjct: 40947 ctccgtctccgcgccttcgcctcc 40970 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctccgtctccgcgccttcccctcc 333 |||||||||||||||||| ||||| Sbjct: 40628 ctccgtctccgcgccttcgcctcc 40605 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctcctccgccgccggcgacg 242 |||||||||||||||||||| Sbjct: 25337 ctcctccgccgccggcgacg 25318
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 cctcctccgccgccggcgacgtcg 245 ||||||||||||||| |||||||| Sbjct: 133028 cctcctccgccgccgccgacgtcg 133005
>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498B01 Length = 146812 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 cctcctccgccgccggcgacgtcg 245 ||||||||||||||| |||||||| Sbjct: 71621 cctcctccgccgccgccgacgtcg 71598
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 gctggatccggctgccacgcgccaccat 144 |||||||||||||||| |||| |||||| Sbjct: 8799816 gctggatccggctgccccgcgacaccat 8799843
>gb|AC090963.32| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435j12, complete sequence Length = 218107 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 153 tcctgctcgccctccacctctccctctccctc 184 ||||||| |||||| |||||||||||||||| Sbjct: 85796 tcctgctagccctctccctctccctctccctc 85765
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ccctctccctcgccgcccag 193 |||||||||||||||||||| Sbjct: 4520877 ccctctccctcgccgcccag 4520896
>gb|AF261719.1|AF261719 Rattus norvegicus high mobility group protein HMGI-C (Hmgi-c) gene, partial cds Length = 4022 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cctccacctctccctctccctcgc 186 |||||| ||||||||||||||||| Sbjct: 2840 cctccaactctccctctccctcgc 2863
>gb|AC148974.5| Mus musculus BAC clone RP24-165K23 from chromosome y, complete sequence Length = 200783 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 80189 ccatctccgtctccgtctcc 80170
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ctctccctctccctcgccgc 189 |||||||||||||||||||| Sbjct: 25806 ctctccctctccctcgccgc 25787
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ctccacctctccctctccct 183 |||||||||||||||||||| Sbjct: 29545 ctccacctctccctctccct 29564
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctcctccgccgccggcgacg 242 |||||||||||||||||||| Sbjct: 83009 ctcctccgccgccggcgacg 82990
>emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 in linkage group 6, complete sequence Length = 167320 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 gcccccgaatcccaccccct 410 |||||||||||||||||||| Sbjct: 24324 gcccccgaatcccaccccct 24305
>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0429B05 Length = 155024 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ccctccacctctccctctcc 181 |||||||||||||||||||| Sbjct: 112682 ccctccacctctccctctcc 112663
>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0409A07 Length = 146663 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ccctccacctctccctctcc 181 |||||||||||||||||||| Sbjct: 33768 ccctccacctctccctctcc 33749
>dbj|AK119420.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-G11, full insert sequence Length = 2980 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gctcccctcctccgccgccg 236 |||||||||||||||||||| Sbjct: 728 gctcccctcctccgccgccg 747
>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026A08 Length = 171272 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gctcccctcctccgccgccg 236 |||||||||||||||||||| Sbjct: 108116 gctcccctcctccgccgccg 108135
>dbj|AK110347.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-G08, full insert sequence Length = 2993 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ctcctccgccgccggcgacg 242 |||||||||||||||||||| Sbjct: 70 ctcctccgccgccggcgacg 89
>dbj|AK073414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039I24, full insert sequence Length = 2025 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 215 gagctcccctcctccgccgccggcgacg 242 |||||| ||||||||| ||||||||||| Sbjct: 84 gagctcacctcctccggcgccggcgacg 111
>dbj|AK072150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132L04, full insert sequence Length = 2333 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gctcccctcctccgccgccg 236 |||||||||||||||||||| Sbjct: 685 gctcccctcctccgccgccg 704
>ref|NM_208406.1| Eremothecium gossypii ABR106Cp (ABR106C), mRNA Length = 927 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 gggacgaggacgagttcgag 442 |||||||||||||||||||| Sbjct: 341 gggacgaggacgagttcgag 360
>dbj|AK070619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062L17, full insert sequence Length = 1049 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 cctcctccgccgccggcgacgtcg 245 ||||||||||||||| |||||||| Sbjct: 338 cctcctccgccgccgccgacgtcg 361
>dbj|AK067377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106M17, full insert sequence Length = 2627 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ccctccacctctccctctcc 181 |||||||||||||||||||| Sbjct: 260 ccctccacctctccctctcc 279
>gb|AF095725.1|AF095725 Homo sapiens PAC LLNLP704E02527Q3 olfactory receptor 17-1 (OR17-1), olfactory receptor 17-2 (OR17-2), olfactory receptor 17-201 (OR17-201), and olfactory receptor 17-93 (OR17-93) genes, complete cds Length = 98573 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cctctccctctccctcgccg 188 |||||||||||||||||||| Sbjct: 32020 cctctccctctccctcgccg 32001
>gb|AC154438.2| Mus musculus BAC clone RP23-178P20 from 16, complete sequence Length = 213575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 tccacctctccctctccctc 184 |||||||||||||||||||| Sbjct: 128422 tccacctctccctctccctc 128403
>dbj|AK063519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H06, full insert sequence Length = 2147 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cccctcctccgccgccggcg 239 |||||||||||||||||||| Sbjct: 265 cccctcctccgccgccggcg 284
>dbj|AK060617.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-B11, full insert sequence Length = 1347 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 tctccctctccctcgccgcc 190 |||||||||||||||||||| Sbjct: 93 tctccctctccctcgccgcc 74
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tctccctctccctcgccgcc 190 |||||||||||||||||||| Sbjct: 36851 tctccctctccctcgccgcc 36870
>gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74 of 118 of the complete sequence Length = 235928 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 7383 ccatctccgtctccgtctcc 7364
>gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65 of 118 of the complete sequence Length = 242618 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 160446 ccatctccgtctccgtctcc 160465
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 cgactcctccgcgccggccg 494 |||||||||||||||||||| Sbjct: 569228 cgactcctccgcgccggccg 569247
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ccgacgagctcccctcctcc 229 |||||||||||||||||||| Sbjct: 22965029 ccgacgagctcccctcctcc 22965048
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ccgacgagctcccctcctcc 229 |||||||||||||||||||| Sbjct: 146115 ccgacgagctcccctcctcc 146134
>gb|U89695.1|RNU89695 Rattus norvegicus non-histone chromosomal architectural protein HMGI-C mRNA, complete cds Length = 802 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cctccacctctccctctccctcgc 186 |||||| ||||||||||||||||| Sbjct: 38 cctccaactctccctctccctcgc 61
>emb|AL844514.12| Zebrafish DNA sequence from clone DKEY-7E20 in linkage group 1, complete sequence Length = 228327 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 aaccctagccttaaccccaacccc 382 ||||||| |||||||||||||||| Sbjct: 140271 aaccctaaccttaaccccaacccc 140294
>gb|AC145601.4| Mus musculus BAC clone RP24-229P8 from Y, complete sequence Length = 165064 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccatctccgtctccgtctcc 319 |||||||||||||||||||| Sbjct: 112652 ccatctccgtctccgtctcc 112671
>gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, complete sequence Length = 250028 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ccctccacctctccctctcc 181 |||||||||||||||||||| Sbjct: 127731 ccctccacctctccctctcc 127712
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gggacgaggacgagttcgag 442 |||||||||||||||||||| Sbjct: 577019 gggacgaggacgagttcgag 577000
>gb|J05130.1|MZENDMEX Maize NADP-dependent malic enzyme (Me1) mRNA, complete cds Length = 2184 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tctccgtctccgtctccgcg 322 |||||||||||||||||||| Sbjct: 331 tctccgtctccgtctccgcg 312
>emb|AL807394.9| Mouse DNA sequence from clone RP23-304N5 on chromosome X, complete sequence Length = 161674 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 169 cctctccctctccctcgccgcccagttc 196 |||||||||||||||| || |||||||| Sbjct: 56859 cctctccctctccctctcctcccagttc 56832
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 ctccgtctccgcgccttcccctcc 333 |||||||||||||||||| ||||| Sbjct: 78984 ctccgtctccgcgccttcgcctcc 79007 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctccgtctccgcgccttcccctcc 333 |||||||||||||||||| ||||| Sbjct: 78665 ctccgtctccgcgccttcgcctcc 78642 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctcctccgccgccggcgacg 242 |||||||||||||||||||| Sbjct: 63374 ctcctccgccgccggcgacg 63355 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,164,898 Number of Sequences: 3902068 Number of extensions: 4164898 Number of successful extensions: 242950 Number of sequences better than 10.0: 236 Number of HSP's better than 10.0 without gapping: 246 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 238178 Number of HSP's gapped (non-prelim): 4746 length of query: 527 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 504 effective length of database: 17,143,297,704 effective search space: 8640222042816 effective search space used: 8640222042816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)