ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart12e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193728.1| Oryza sativa (japonica cultivar-group), predic... 305 8e-80
2dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 8e-80
3gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependen... 172 7e-40
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 172 7e-40
5dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic D... 172 7e-40
6gb|AY109053.1| Zea mays PCO106983 mRNA sequence 127 4e-26
7gb|AY107538.1| Zea mays PCO073954 mRNA sequence 105 1e-19
8gb|AY496111.1| Capsicum annuum ClpP putative protein mRNA, parti... 54 5e-04
9gb|L41144.1|BNACLPPA Brassica oleracea ClpP (clpP) mRNA, partial... 52 0.002
10gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, par... 46 0.11
11gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co... 46 0.11
12gb|AY267691.1| Bigelowiella natans ClpP protease mRNA, partial c... 46 0.11
13gb|DQ071229.1| Bigelowiella natans clone 3 clpP2 mRNA, partial s... 46 0.11
14gb|DQ071224.1| Bigelowiella natans clone 2 clpP2 mRNA, partial s... 46 0.11
15gb|DQ071217.1| Bigelowiella natans clone 4 clpP2 mRNA, partial s... 46 0.11
16gb|AC146385.4| Pan troglodytes BAC clone RP43-126C6 from 7, comp... 44 0.45
17gb|AC146213.2| Pan troglodytes BAC clone RP43-33O10 from 7, comp... 44 0.45
18gb|DP000002.1| Sminthopsis macroura target 1 genomic scaffold 44 0.45
19gb|AC123967.3| Sminthopsis macroura clone 102C13, complete sequence 44 0.45
20gb|AC083865.2|AC083865 Homo sapiens chromosome 7 clone RP11-605P... 44 0.45
21gb|AC083860.2|AC083860 Homo sapiens chromosome 7 clone RP11-3P18... 44 0.45
22gb|AE009001.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 1.8
23gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESR... 42 1.8
24gb|AF445418.1| Homo sapiens FP7189 mRNA, complete cds 42 1.8
25gb|AC007130.2| Homo sapiens BAC clone GS1-98E2 from 7, complete ... 42 1.8
26emb|Z85986.1|HS108K11 Human DNA sequence from clone RP1-108K11 o... 42 1.8
27emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chro... 42 1.8
28emb|AL500526.13| Human DNA sequence from clone RP11-281J22 on ch... 42 1.8
29emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on ch... 42 1.8
30emb|AL357041.11| Human DNA sequence from clone RP11-221L2 on chr... 42 1.8
31gb|DQ071215.1| Bigelowiella natans clpP2 mRNA, partial sequence 42 1.8
32gb|AC090574.6| Homo sapiens chromosome 8, clone RP11-449M6, comp... 42 1.8
33gb|AC093283.3| Homo sapiens chromosome 5 clone RP11-428C6, compl... 42 1.8
34gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 1.8
35gb|AC025370.12| Homo sapiens chromosome 8, clone RP11-318M2, com... 42 1.8
36gb|AC069351.5| Homo sapiens chromosome 8, clone RP11-432K23, com... 42 1.8
37gb|AC160942.1| Pan troglodytes BAC clone CH251-443J9 from chromo... 42 1.8
38gb|AC163758.3| Pan troglodytes BAC clone CH251-221N15 from chrom... 42 1.8
39gb|AC149149.3| Xenopus tropicalis clone ISB-175F5, complete sequ... 42 1.8
40gb|AC111200.7| Homo sapiens BAC clone RP11-1283H4 from 2, comple... 42 1.8
41gb|AC092652.2| Homo sapiens BAC clone RP11-434H14 from 2, comple... 42 1.8
42gb|AC004241.2| Homo sapiens 12 PAC RP3-197B17 (Roswell Park Canc... 42 1.8
43gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal pro... 42 1.8
44gb|AC006500.4|AC006500 Homo sapiens, clone hRPK.31_A_1, complete... 42 1.8
45dbj|AP005855.2| Homo sapiens genomic DNA, chromosome 8q22, clone... 42 1.8
46gb|U71217.1|HSU71217 Human clone c15H12, 24Kb distal CMT1A-REP s... 42 1.8
47gb|AC005389.1|AC005389 Homo sapiens chromosome 17, clone hRPK.60... 42 1.8
48dbj|AP004221.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.8
49ref|NM_123547.1| Arabidopsis thaliana protein prenyltransferase ... 40 7.1
50ref|NM_105338.2| Arabidopsis thaliana CLPP3; endopeptidase Clp A... 40 7.1
51ref|XM_480351.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
52emb|CR694080.2|CNS0FYI4 Tetraodon nigroviridis full-length cDNA 40 7.1
53gb|AC073236.8| Homo sapiens BAC clone RP11-774B15 from 7, comple... 40 7.1
54emb|CR678681.2|CNS0FMMD Tetraodon nigroviridis full-length cDNA 40 7.1
55emb|CR678052.2|CNS0FM57 Tetraodon nigroviridis full-length cDNA 40 7.1
56emb|CR674696.2|CNS0FJKE Tetraodon nigroviridis full-length cDNA 40 7.1
57emb|CR671456.2|CNS0FH2E Tetraodon nigroviridis full-length cDNA 40 7.1
58emb|CR670920.2|CNS0FGNI Tetraodon nigroviridis full-length cDNA 40 7.1
59emb|CR669971.2|CNS0FFX5 Tetraodon nigroviridis full-length cDNA 40 7.1
60emb|CR668522.2|CNS0FESW Tetraodon nigroviridis full-length cDNA 40 7.1
61emb|CR665602.2|CNS0FCJS Tetraodon nigroviridis full-length cDNA 40 7.1
62emb|CR663706.2|CNS0FB34 Tetraodon nigroviridis full-length cDNA 40 7.1
63emb|CR662211.2|CNS0F9XL Tetraodon nigroviridis full-length cDNA 40 7.1
64emb|CR661865.2|CNS0F9NZ Tetraodon nigroviridis full-length cDNA 40 7.1
65gb|AC142209.3| Homo sapiens chromosome 5 clone XXyac-ICRF4X137E6... 40 7.1
66emb|CR932803.1| Mus musculus chromosome 2, clone GenSys-110A4 st... 40 7.1
67emb|AL928860.10| Mouse DNA sequence from clone RP23-5I15 on chro... 40 7.1
68dbj|AB190353.1| Brassica rapa BrSLGf2b, BrSLGf2a genes, complete... 40 7.1
69gb|AC108120.3| Homo sapiens chromosome 5 clone RP11-524L6, compl... 40 7.1
70gb|AC010240.7| Homo sapiens chromosome 5 clone CTC-350I8, comple... 40 7.1
71gb|AY072526.1| Arabidopsis thaliana ATP-dependent Clp protease (... 40 7.1
72gb|AC159023.4| Pan troglodytes BAC clone CH251-506L16 from chrom... 40 7.1
73gb|AF370528.1|AF370528 Arabidopsis thaliana ATP-dependent Clp pr... 40 7.1
74dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
75emb|BX817427.1|CNS0ACFS Arabidopsis thaliana Full-length cDNA Co... 40 7.1
76gb|AY087349.1| Arabidopsis thaliana clone 34480 mRNA, complete s... 40 7.1
77gb|AC159743.4| Pan troglodytes BAC clone CH251-267D14 from chrom... 40 7.1
78dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
79dbj|AB016871.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.1
80dbj|AB022328.1| Arabidopsis thaliana mRNA for nClpP3 (nuclear en... 40 7.1
81dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
82ref|XM_308493.2| Anopheles gambiae str. PEST ENSANGP00000022800 ... 40 7.1
83emb|AL133372.4|CNS01DUX Human chromosome 14 DNA sequence BAC R-2... 40 7.1
84gb|AF032123.1|AF032123 Arabidopsis thaliana clp protease (CLP) m... 40 7.1
85emb|AL023580.1|HS372K1 Human DNA sequence from clone RP3-372K1 o... 40 7.1 
>ref|NM_193728.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 954

 Score =  305 bits (154), Expect = 8e-80
 Identities = 259/294 (88%)
 Strand = Plus / Plus

                                                                       
Query: 231 ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 290
           ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| |||||||||
Sbjct: 199 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 258

                                                                       
Query: 291 ccggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaag 350
           |||||||||||| ||| ||| |||||||||| ||| ||||| || ||  |||||||  ||
Sbjct: 259 ccggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgag 318

                                                                       
Query: 351 gaccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagga 410
           ||  | || ||||||||||| ||||||||||| ||||| ||||||||||| || ||||||
Sbjct: 319 gataaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagga 378

                                                                       
Query: 411 atggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgctttgga 470
           |||||  |||||||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 379 atgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgctttgga 438

                                                                 
Query: 471 ttggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagaga 524
            |||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 439 ctggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagaga 492
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>dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094H09, full
           insert sequence
          Length = 1257

 Score =  305 bits (154), Expect = 8e-80
 Identities = 259/294 (88%)
 Strand = Plus / Plus

                                                                       
Query: 231 ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 290
           ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| |||||||||
Sbjct: 294 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 353

                                                                       
Query: 291 ccggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaag 350
           |||||||||||| ||| ||| |||||||||| ||| ||||| || ||  |||||||  ||
Sbjct: 354 ccggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgag 413

                                                                       
Query: 351 gaccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagga 410
           ||  | || ||||||||||| ||||||||||| ||||| ||||||||||| || ||||||
Sbjct: 414 gataaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagga 473

                                                                       
Query: 411 atggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgctttgga 470
           |||||  |||||||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 474 atgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgctttgga 533

                                                                 
Query: 471 ttggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagaga 524
            |||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 534 ctggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagaga 587
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>gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependent Clp protease
            (Pi-HIT-1) gene, complete cds
          Length = 2750

 Score =  172 bits (87), Expect = 7e-40
 Identities = 111/119 (93%)
 Strand = Plus / Plus

                                                                        
Query: 406  caggaatggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgct 465
            ||||||||||  |||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct: 1249 caggaatgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgct 1308

                                                                       
Query: 466  ttggattggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagaga 524
            ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 1309 ttggactggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagaga 1367
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  172 bits (87), Expect = 7e-40
 Identities = 111/119 (93%)
 Strand = Plus / Plus

                                                                            
Query: 406      caggaatggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgct 465
                ||||||||||  |||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct: 17746815 caggaatgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgct 17746874

                                                                           
Query: 466      ttggattggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagaga 524
                ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 17746875 ttggactggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagaga 17746933



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Plus

                                                                            
Query: 293      ggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaagga 352
                |||||||||| ||| ||| |||||||||| ||| ||||| || ||  |||||||  ||||
Sbjct: 17744131 ggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgagga 17744190

                                                                         
Query: 353      ccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagg 409
                  | || ||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 17744191 taaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagg 17744247



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 231      ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 290
                ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| |||||||||
Sbjct: 17742764 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 17742823

                     
Query: 291      ccggt 295
                |||||
Sbjct: 17742824 ccggt 17742828
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>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0094H06
          Length = 147245

 Score =  172 bits (87), Expect = 7e-40
 Identities = 111/119 (93%)
 Strand = Plus / Plus

                                                                          
Query: 406    caggaatggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgct 465
              ||||||||||  |||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct: 128350 caggaatgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgct 128409

                                                                         
Query: 466    ttggattggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagaga 524
              ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 128410 ttggactggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagaga 128468



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Plus

                                                                          
Query: 293    ggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaagga 352
              |||||||||| ||| ||| |||||||||| ||| ||||| || ||  |||||||  ||||
Sbjct: 125666 ggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgagga 125725

                                                                       
Query: 353    ccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagg 409
                | || ||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 125726 taaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagg 125782



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                          
Query: 231    ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 290
              ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| |||||||||
Sbjct: 124299 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 124358

                   
Query: 291    ccggt 295
              |||||
Sbjct: 124359 ccggt 124363
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>gb|AY109053.1| Zea mays PCO106983 mRNA sequence
          Length = 704

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                       
Query: 420 tatgatgccatgaaattttgcaaggctgatatctcaaccgtttgctttggattggcggct 479
           |||||||| |||||||||||||| |||||| | ||||| |||||||||||||||||||||
Sbjct: 702 tatgatgctatgaaattttgcaaagctgatgtgtcaactgtttgctttggattggcggct 643

                                                       
Query: 480 tccatgggtgcatttttgttagctgctgggacaaagggaaagag 523
           || ||||||||||||||  | ||||||||||||||||| |||||
Sbjct: 642 tcaatgggtgcatttttacttgctgctgggacaaagggtaagag 599
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>gb|AY107538.1| Zea mays PCO073954 mRNA sequence
          Length = 607

 Score =  105 bits (53), Expect = 1e-19
 Identities = 199/244 (81%), Gaps = 3/244 (1%)
 Strand = Plus / Plus

                                                                       
Query: 251 caacatgcttctccgccagcggatcatctttctcggctccccggtggatgatttgaatgc 310
           ||||||||| || |||||||| ||| |||| || || |||||||||||||||   | |||
Sbjct: 355 caacatgctccttcgccagcgcatcgtcttcctgggttccccggtggatgatacaagtgc 414

                                                                       
Query: 311 ggatcttatcaccagtcaactgttactattggatgcaaaggaccacacaaaggacatcaa 370
            ||||| || | ||| |||||  |||||||||||||| ||||||| || || || || ||
Sbjct: 415 tgatctcattatcagccaactcctactattggatgcagaggaccagactaaagatattaa 474

                                                                       
Query: 371 gttgtttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccat 430
            |||||||| || ||||| |||||||| || || ||||| |||||  | |||||||| ||
Sbjct: 475 attgtttatcaactcacctggaggctctataacagcagggatgggagtatatgatgctat 534

                                                                       
Query: 431 gaaattttgcaaggctgatatctcaaccgtttgctttggattggcggcttccatgggtgc 490
           |||||||||||| |||||| | ||||  |||| |||| ||||||||||||  ||||||||
Sbjct: 535 gaaattttgcaaagctgatgtgtcaa-tgttt-cttt-gattggcggcttnaatgggtgc 591

               
Query: 491 attt 494
           ||||
Sbjct: 592 attt 595
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>gb|AY496111.1| Capsicum annuum ClpP putative protein mRNA, partial sequence
          Length = 624

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                       
Query: 359 aaaggacatcaagttgtttattaattcacccggaggctccatcactgcaggaatggggat 418
           |||||||||||  ||| | ||||||||||| || || ||  | ||||| || ||||| ||
Sbjct: 392 aaaggacatcacattgatcattaattcacctggtggttcagtaactgctgggatgggaat 451

                                          
Query: 419 ttatgatgccatgaaattttgcaaggctgat 449
            ||||||||||||||| | ||||||||||||
Sbjct: 452 ctatgatgccatgaaaatgtgcaaggctgat 482
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>gb|L41144.1|BNACLPPA Brassica oleracea ClpP (clpP) mRNA, partial cds
          Length = 971

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 373 tgtttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatga 432
           ||||||| ||||||||||| || || |||||||| || ||||| || |||||||| ||||
Sbjct: 295 tgtttatcaattcacccggtggttctatcactgctgggatgggaatatatgatgcaatga 354

             
Query: 433 aa 434
           ||
Sbjct: 355 aa 356
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>gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, partial sequence
          Length = 140590

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 477   gcttccatgggtgcatttttgttagct 503
             ||||| |||||||||||||||||||||
Sbjct: 83017 gcttcaatgggtgcatttttgttagct 82991
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>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
              genome
          Length = 686194

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 477    gcttccatgggtgcatttttgttagctgctgggac 511
              ||||||||||||||||| ||| | |||||||||||
Sbjct: 281007 gcttccatgggtgcattcttgcttgctgctgggac 280973
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>gb|AY267691.1| Bigelowiella natans ClpP protease mRNA, partial cds; nuclear gene
           for plastid product
          Length = 867

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 477 gcttccatgggtgcatttttgttagct 503
           ||||| |||||||||||||||||||||
Sbjct: 394 gcttcaatgggtgcatttttgttagct 420
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>gb|DQ071229.1| Bigelowiella natans clone 3 clpP2 mRNA, partial sequence;
           nucleomorph
          Length = 832

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 477 gcttccatgggtgcatttttgttagct 503
           ||||| |||||||||||||||||||||
Sbjct: 395 gcttcaatgggtgcatttttgttagct 421
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>gb|DQ071224.1| Bigelowiella natans clone 2 clpP2 mRNA, partial sequence;
           nucleomorph
          Length = 857

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 477 gcttccatgggtgcatttttgttagct 503
           ||||| |||||||||||||||||||||
Sbjct: 396 gcttcaatgggtgcatttttgttagct 422
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>gb|DQ071217.1| Bigelowiella natans clone 4 clpP2 mRNA, partial sequence;
           nucleomorph
          Length = 813

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 477 gcttccatgggtgcatttttgttagct 503
           ||||| |||||||||||||||||||||
Sbjct: 388 gcttcaatgggtgcatttttgttagct 414
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>gb|AC146385.4| Pan troglodytes BAC clone RP43-126C6 from 7, complete sequence
          Length = 162268

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 19    aaaaagtggaaggtgaagcagc 40
             ||||||||||||||||||||||
Sbjct: 15897 aaaaagtggaaggtgaagcagc 15918
to top
>gb|AC146213.2| Pan troglodytes BAC clone RP43-33O10 from 7, complete sequence
          Length = 187649

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 19     aaaaagtggaaggtgaagcagc 40
              ||||||||||||||||||||||
Sbjct: 120053 aaaaagtggaaggtgaagcagc 120032
to top
>gb|DP000002.1| Sminthopsis macroura target 1 genomic scaffold
          Length = 305394

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 503   tgctgggacaaagggaaagaga 524
             ||||||||||||||||||||||
Sbjct: 53011 tgctgggacaaagggaaagaga 53032
to top
>gb|AC123967.3| Sminthopsis macroura clone 102C13, complete sequence
          Length = 59818

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 503   tgctgggacaaagggaaagaga 524
             ||||||||||||||||||||||
Sbjct: 53011 tgctgggacaaagggaaagaga 53032
to top
>gb|AC083865.2|AC083865 Homo sapiens chromosome 7 clone RP11-605P22, complete sequence
          Length = 218186

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 19   aaaaagtggaaggtgaagcagc 40
            ||||||||||||||||||||||
Sbjct: 2894 aaaaagtggaaggtgaagcagc 2915
to top
>gb|AC083860.2|AC083860 Homo sapiens chromosome 7 clone RP11-3P18, complete sequence
          Length = 165120

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 19    aaaaagtggaaggtgaagcagc 40
             ||||||||||||||||||||||
Sbjct: 47066 aaaaagtggaaggtgaagcagc 47087
to top
>gb|AE009001.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 27
           of 256 of the complete sequence
          Length = 11563

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 42  atggcgaccatcacggcgcct 62
           |||||||||||||||||||||
Sbjct: 794 atggcgaccatcacggcgcct 774
to top
>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds
          Length = 590284

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     aaaagtggaaggtgaagcagc 40
              |||||||||||||||||||||
Sbjct: 251346 aaaagtggaaggtgaagcagc 251366
to top
>gb|AF445418.1| Homo sapiens FP7189 mRNA, complete cds
          Length = 1566

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 20  aaaagtggaaggtgaagcagc 40
           |||||||||||||||||||||
Sbjct: 790 aaaagtggaaggtgaagcagc 770
to top
>gb|AC007130.2| Homo sapiens BAC clone GS1-98E2 from 7, complete sequence
          Length = 135553

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 20   aaaagtggaaggtgaagcagc 40
            |||||||||||||||||||||
Sbjct: 5946 aaaagtggaaggtgaagcagc 5966
to top
>emb|Z85986.1|HS108K11 Human DNA sequence from clone RP1-108K11 on chromosome 6p21 Contains
             the SFRS3 for splicing factor arginine/serine-rich
             (SRP20), the STK38 gene for serine/threonine protein
             kinase (NDR), the 3' end of a gene for a novel protein
             (2410004NRIK) and a CpG island, complete sequence
          Length = 145616

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 16    aacaaaaagtggaaggtgaagcagc 40
             ||||||||||| |||||||||||||
Sbjct: 11386 aacaaaaagtgcaaggtgaagcagc 11362
to top
>emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chromosome 1 Contains part
             of the ESRRG gene for  estrogen-related receptor gamma,
             complete sequence
          Length = 48868

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 22004 aaaagtggaaggtgaagcagc 21984
to top
>emb|AL500526.13| Human DNA sequence from clone RP11-281J22 on chromosome 10, complete
             sequence
          Length = 60328

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 36925 aaaagtggaaggtgaagcagc 36905
to top
>emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on chromosome 1, complete
             sequence
          Length = 191686

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 80750 aaaagtggaaggtgaagcagc 80770
to top
>emb|AL357041.11| Human DNA sequence from clone RP11-221L2 on chromosome 1 Contains ESTs,
             STSs and GSSs, complete sequence
          Length = 130794

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 50884 aaaagtggaaggtgaagcagc 50864
to top
>gb|DQ071215.1| Bigelowiella natans clpP2 mRNA, partial sequence
          Length = 874

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 477 gcttccatgggtgcatttttgttagct 503
           ||||| ||||| |||||||||||||||
Sbjct: 393 gcttcnatgggngcatttttgttagct 419
to top
>gb|AC090574.6| Homo sapiens chromosome 8, clone RP11-449M6, complete sequence
          Length = 172969

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 20     aaaagtggaaggtgaagcagc 40
              |||||||||||||||||||||
Sbjct: 103447 aaaagtggaaggtgaagcagc 103427
to top
>gb|AC093283.3| Homo sapiens chromosome 5 clone RP11-428C6, complete sequence
          Length = 206254

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 479   ttccatgggtgcatttttgtt 499
             |||||||||||||||||||||
Sbjct: 78699 ttccatgggtgcatttttgtt 78719
to top
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     atggcgaccatcacggcgcct 62
              |||||||||||||||||||||
Sbjct: 286130 atggcgaccatcacggcgcct 286110
to top
>gb|AC025370.12| Homo sapiens chromosome 8, clone RP11-318M2, complete sequence
          Length = 193589

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 48286 aaaagtggaaggtgaagcagc 48306
to top
>gb|AC069351.5| Homo sapiens chromosome 8, clone RP11-432K23, complete sequence
          Length = 111496

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 18407 aaaagtggaaggtgaagcagc 18387
to top
>gb|AC160942.1| Pan troglodytes BAC clone CH251-443J9 from chromosome unknown, complete
              sequence
          Length = 182340

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     aaaagtggaaggtgaagcagc 40
              |||||||||||||||||||||
Sbjct: 163085 aaaagtggaaggtgaagcagc 163105
to top
>gb|AC163758.3| Pan troglodytes BAC clone CH251-221N15 from chromosome 7, complete
             sequence
          Length = 157318

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 90809 aaaagtggaaggtgaagcagc 90789
to top
>gb|AC149149.3| Xenopus tropicalis clone ISB-175F5, complete sequence
          Length = 116498

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 484   tgggtgcatttttgttagctg 504
             |||||||||||||||||||||
Sbjct: 85910 tgggtgcatttttgttagctg 85930
to top
>gb|AC111200.7| Homo sapiens BAC clone RP11-1283H4 from 2, complete sequence
          Length = 186752

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 63173 aaaagtggaaggtgaagcagc 63193
to top
>gb|AC092652.2| Homo sapiens BAC clone RP11-434H14 from 2, complete sequence
          Length = 161975

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 76137 aaaagtggaaggtgaagcagc 76117
to top
>gb|AC004241.2| Homo sapiens 12 PAC RP3-197B17 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 136877

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 60147 aaaagtggaaggtgaagcagc 60127
to top
>gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal protein (ATP6C) gene,
              complete cds; BAALC (BAALC) gene, complete cds,
              alternatively spliced; and frizzled-like protein 6 (FZD6)
              gene, complete cds
          Length = 347253

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 20     aaaagtggaaggtgaagcagc 40
              |||||||||||||||||||||
Sbjct: 298970 aaaagtggaaggtgaagcagc 298950
to top
>gb|AC006500.4|AC006500 Homo sapiens, clone hRPK.31_A_1, complete sequence
          Length = 147699

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 55262 aaaagtggaaggtgaagcagc 55282
to top
>dbj|AP005855.2| Homo sapiens genomic DNA, chromosome 8q22, clone: KB1560G11, complete
              sequence
          Length = 152531

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 20     aaaagtggaaggtgaagcagc 40
              |||||||||||||||||||||
Sbjct: 148579 aaaagtggaaggtgaagcagc 148559
to top
>gb|U71217.1|HSU71217 Human clone c15H12, 24Kb distal CMT1A-REP sequence
          Length = 39906

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 16   aacaaaaagtggaaggtgaagcagc 40
            ||||||||||| |||||||||||||
Sbjct: 1906 aacaaaaagtgcaaggtgaagcagc 1930
to top
>gb|AC005389.1|AC005389 Homo sapiens chromosome 17, clone hRPK.601_N_13, complete sequence
          Length = 120359

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 16    aacaaaaagtggaaggtgaagcagc 40
             ||||||||||| |||||||||||||
Sbjct: 17604 aacaaaaagtgcaaggtgaagcagc 17580
to top
>dbj|AP004221.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1896D3
          Length = 160197

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aaaagtggaaggtgaagcagc 40
             |||||||||||||||||||||
Sbjct: 30429 aaaagtggaaggtgaagcagc 30409
to top
>ref|NM_123547.1| Arabidopsis thaliana protein prenyltransferase AT5G41820 mRNA,
           complete cds
          Length = 2064

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 gtcaactgttactattggat 344
           ||||||||||||||||||||
Sbjct: 921 gtcaactgttactattggat 940
to top
>ref|NM_105338.2| Arabidopsis thaliana CLPP3; endopeptidase Clp AT1G66670 (CLPP3)
           mRNA, complete cds
          Length = 1194

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 375 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 434
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 439 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 498
to top
>ref|XM_480351.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1248

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 199 cgggagcgcgaccggcagct 218
           ||||||||||||||||||||
Sbjct: 124 cgggagcgcgaccggcagct 143
to top
>emb|CR694080.2|CNS0FYI4 Tetraodon nigroviridis full-length cDNA
          Length = 764

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 587 ggtgcatttttgttagctgc 606
to top
>gb|AC073236.8| Homo sapiens BAC clone RP11-774B15 from 7, complete sequence
          Length = 171012

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     aaaagtggaaggtgaagcag 39
              ||||||||||||||||||||
Sbjct: 103540 aaaagtggaaggtgaagcag 103559
to top
>emb|CR678681.2|CNS0FMMD Tetraodon nigroviridis full-length cDNA
          Length = 679

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 534 ggtgcatttttgttagctgc 553
to top
>emb|CR678052.2|CNS0FM57 Tetraodon nigroviridis full-length cDNA
          Length = 745

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 567 ggtgcatttttgttagctgc 586
to top
>emb|CR674696.2|CNS0FJKE Tetraodon nigroviridis full-length cDNA
          Length = 769

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 591 ggtgcatttttgttagctgc 610
to top
>emb|CR671456.2|CNS0FH2E Tetraodon nigroviridis full-length cDNA
          Length = 757

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 586 ggtgcatttttgttagctgc 605
to top
>emb|CR670920.2|CNS0FGNI Tetraodon nigroviridis full-length cDNA
          Length = 716

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 538 ggtgcatttttgttagctgc 557
to top
>emb|CR669971.2|CNS0FFX5 Tetraodon nigroviridis full-length cDNA
          Length = 757

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 586 ggtgcatttttgttagctgc 605
to top
>emb|CR668522.2|CNS0FESW Tetraodon nigroviridis full-length cDNA
          Length = 753

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 579 ggtgcatttttgttagctgc 598
to top
>emb|CR665602.2|CNS0FCJS Tetraodon nigroviridis full-length cDNA
          Length = 765

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 596 ggtgcatttttgttagctgc 615
to top
>emb|CR663706.2|CNS0FB34 Tetraodon nigroviridis full-length cDNA
          Length = 766

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 586 ggtgcatttttgttagctgc 605
to top
>emb|CR662211.2|CNS0F9XL Tetraodon nigroviridis full-length cDNA
          Length = 769

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 591 ggtgcatttttgttagctgc 610
to top
>emb|CR661865.2|CNS0F9NZ Tetraodon nigroviridis full-length cDNA
          Length = 526

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 ggtgcatttttgttagctgc 505
           ||||||||||||||||||||
Sbjct: 346 ggtgcatttttgttagctgc 365
to top
>gb|AC142209.3| Homo sapiens chromosome 5 clone XXyac-ICRF4X137E6, complete sequence
          Length = 38959

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 432   aaattttgcaaggctgatat 451
             ||||||||||||||||||||
Sbjct: 29077 aaattttgcaaggctgatat 29058
to top
>emb|CR932803.1| Mus musculus chromosome 2, clone GenSys-110A4 strain 129/Sv, complete
             sequence
          Length = 134122

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 13    gataacaaaaagtggaaggtgaagcagc 40
             |||||| ||||||||| |||||||||||
Sbjct: 97024 gataaccaaaagtggatggtgaagcagc 96997
to top
>emb|AL928860.10| Mouse DNA sequence from clone RP23-5I15 on chromosome 2, complete
             sequence
          Length = 132808

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 13    gataacaaaaagtggaaggtgaagcagc 40
             |||||| ||||||||| |||||||||||
Sbjct: 88793 gataaccaaaagtggatggtgaagcagc 88766
to top
>dbj|AB190353.1| Brassica rapa BrSLGf2b, BrSLGf2a genes, complete cds
          Length = 39220

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 375  tttattaattcacccggaggctccatcactgc 406
            ||||| ||||||||||| || |||||||||||
Sbjct: 7477 tttatcaattcacccggtggttccatcactgc 7446
to top
>gb|AC108120.3| Homo sapiens chromosome 5 clone RP11-524L6, complete sequence
          Length = 212755

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    ttgcaaggctgatatctcaa 456
              ||||||||||||||||||||
Sbjct: 119802 ttgcaaggctgatatctcaa 119783
to top
>gb|AC010240.7| Homo sapiens chromosome 5 clone CTC-350I8, complete sequence
          Length = 112646

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   tcgaggagttggacaccagc 251
             ||||||||||||||||||||
Sbjct: 92860 tcgaggagttggacaccagc 92841
to top
>gb|AY072526.1| Arabidopsis thaliana ATP-dependent Clp protease (nClpP3)
           (At1g66670; T12I7.12) mRNA, complete cds
          Length = 986

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 375 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 434
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 385 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 444
to top
>gb|AC159023.4| Pan troglodytes BAC clone CH251-506L16 from chromosome unknown, complete
              sequence
          Length = 180977

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 232    tcgaggagttggacaccagc 251
              ||||||||||||||||||||
Sbjct: 107093 tcgaggagttggacaccagc 107112
to top
>gb|AF370528.1|AF370528 Arabidopsis thaliana ATP-dependent Clp protease; nClpP3 (T12I7.12)
           mRNA, complete cds
          Length = 1108

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 375 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 434
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 422 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 481
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 199     cgggagcgcgaccggcagct 218
               ||||||||||||||||||||
Sbjct: 4540750 cgggagcgcgaccggcagct 4540769
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>emb|BX817427.1|CNS0ACFS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL21ZH02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1046

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 375 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 434
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 381 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 440
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>gb|AY087349.1| Arabidopsis thaliana clone 34480 mRNA, complete sequence
          Length = 1190

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 375 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 434
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 439 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 498
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>gb|AC159743.4| Pan troglodytes BAC clone CH251-267D14 from chromosome unknown, complete
              sequence
          Length = 178837

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    tcgaggagttggacaccagc 251
              ||||||||||||||||||||
Sbjct: 166487 tcgaggagttggacaccagc 166468
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>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1120_C08
          Length = 150300

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   cgggagcgcgaccggcagct 218
             ||||||||||||||||||||
Sbjct: 64598 cgggagcgcgaccggcagct 64617
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>dbj|AB016871.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16L22
          Length = 79109

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   gtcaactgttactattggat 344
             ||||||||||||||||||||
Sbjct: 43371 gtcaactgttactattggat 43390
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>dbj|AB022328.1| Arabidopsis thaliana mRNA for nClpP3 (nuclear encoded ClpP3),
           complete cds
          Length = 1124

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 375 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 434
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 386 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 445
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>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0583B06
          Length = 134442

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    cgggagcgcgaccggcagct 218
              ||||||||||||||||||||
Sbjct: 106640 cgggagcgcgaccggcagct 106659
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>ref|XM_308493.2| Anopheles gambiae str. PEST ENSANGP00000022800
           (ENSANGG00000007128), partial mRNA
          Length = 2943

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 130 cggccatccgctcatcggcggcggcagc 157
           |||| ||||||||| |||||||||||||
Sbjct: 798 cggcgatccgctcagcggcggcggcagc 825
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>emb|AL133372.4|CNS01DUX Human chromosome 14 DNA sequence BAC R-269C4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190910

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     aaaagtggaaggtgaagcag 39
              ||||||||||||||||||||
Sbjct: 158673 aaaagtggaaggtgaagcag 158692
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>gb|AF032123.1|AF032123 Arabidopsis thaliana clp protease (CLP) mRNA, partial cds
          Length = 1147

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 375 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 434
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 388 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 447
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>emb|AL023580.1|HS372K1 Human DNA sequence from clone RP3-372K1 on chromosome 6q24 Contains a
              basic transcription factor (BTF3) pseudogene, the gene for
              a possible ortholog of murine oligodendrocyte transcription
              factor 3 (Olig3) and four CpG islands, complete sequence
          Length = 147055

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    ctccatcactgcaggaatgg 414
              ||||||||||||||||||||
Sbjct: 116019 ctccatcactgcaggaatgg 116038


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,486,532
Number of Sequences: 3902068
Number of extensions: 4486532
Number of successful extensions: 85753
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85528
Number of HSP's gapped (non-prelim): 222
length of query: 524
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 501
effective length of database: 17,143,297,704
effective search space: 8588792149704
effective search space used: 8588792149704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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