Clone Name | bart12e06 |
---|---|
Clone Library Name | barley_pub |
>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)| Length = 458 Score = 62.8 bits (151), Expect = 2e-10 Identities = 28/43 (65%), Positives = 33/43 (76%) Frame = +3 Query: 156 IVSYGERSEEEVRRMYAEWMAEHGSTYNAIXXXXXXF*AFRDS 284 IVSYGERSEEE RR+YAEW AEHG +YNA+ + AFRD+ Sbjct: 25 IVSYGERSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDN 67
>CPR1_ARATH (Q9LT77) Probable cysteine proteinase At3g19400 precursor (EC| 3.4.22.-) Length = 362 Score = 36.2 bits (82), Expect = 0.022 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +3 Query: 171 ERSEEEVRRMYAEWMAEHGSTYNAIXXXXXXF*AFRDS 284 ER+E EVR MY +W+ E+ YN + F F+D+ Sbjct: 34 ERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDN 71
>CPR2_ARATH (Q9LXW3) Probable cysteine proteinase At3g43960 precursor (EC| 3.4.22.-) Length = 376 Score = 35.4 bits (80), Expect = 0.038 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 Query: 171 ERSEEEVRRMYAEWMAEHGSTYNAIXXXXXXF*AFRDS 284 +R+E EV MY +W+ E+G YN + F F+D+ Sbjct: 31 QRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDN 68
>GCP1_ARATH (Q94B08) Germination-specific cysteine protease 1 precursor (EC| 3.4.22.-) Length = 376 Score = 34.3 bits (77), Expect = 0.084 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +3 Query: 174 RSEEEVRRMYAEWMAEHGSTYN 239 R++EEVR +Y +W AEHG T N Sbjct: 40 RTDEEVRSIYLQWSAEHGKTNN 61
>ACTN_ACTCH (P00785) Actinidain precursor (EC 3.4.22.14) (Actinidin) (Allergen| Act c 1) Length = 380 Score = 33.1 bits (74), Expect = 0.19 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = +3 Query: 171 ERSEEEVRRMYAEWMAEHGSTYNAIXXXXXXF*AFRDS 284 +R+ +EV+ MY W+ ++G +YN++ F F+++ Sbjct: 32 QRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKET 69
>RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4.22.-) (RD21)| Length = 462 Score = 29.3 bits (64), Expect = 2.7 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +3 Query: 168 GERSEEEVRRMYAEWMAEHG--STYNAIXXXXXXF*AFRDS 284 G RSE EV +Y W+ +HG + N++ F F+D+ Sbjct: 39 GGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDN 79
>PAHO_CAVPO (P13083) Pancreatic prohormone precursor (Pancreatic polypeptide)| (PP) [Contains: Pancreatic hormone; Pancreatic icosapeptide-like] Length = 126 Score = 28.9 bits (63), Expect = 3.5 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -1 Query: 276 GTPRSGAPPRGWRCTYCRA 220 GT SG+PP+ W C CRA Sbjct: 101 GTGVSGSPPKPWDCLPCRA 119
>CN159_HUMAN (Q7Z3D6) Protein C14orf159, mitochondrial precursor| Length = 616 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -3 Query: 241 ALYVLPCSAIHSAYIRRTSSSLRSP*D 161 ALY+L A+HS Y+R+ R+P D Sbjct: 529 ALYILYSCAVHSQYLRKAVGPSRAPGD 555
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 27.7 bits (60), Expect = 7.9 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = +1 Query: 169 GSGARRRSGGCTPSGW 216 GSG R SG C P GW Sbjct: 41 GSGGRSSSGACAPVGW 56
>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1| Length = 1561 Score = 27.7 bits (60), Expect = 7.9 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -2 Query: 275 ERLEAALLLADGVVRTAVLRHPLGVHPPDLLLAPL 171 E+L L+ DG + RHP+ +H D + APL Sbjct: 875 EQLVQKLMETDGDPNCVLWRHPILLHTKDTITAPL 909 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,612,282 Number of Sequences: 219361 Number of extensions: 380873 Number of successful extensions: 1372 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1346 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1372 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)