ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart12e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-) 63 2e-10
2CPR1_ARATH (Q9LT77) Probable cysteine proteinase At3g19400 precu... 36 0.022
3CPR2_ARATH (Q9LXW3) Probable cysteine proteinase At3g43960 precu... 35 0.038
4GCP1_ARATH (Q94B08) Germination-specific cysteine protease 1 pre... 34 0.084
5ACTN_ACTCH (P00785) Actinidain precursor (EC 3.4.22.14) (Actinid... 33 0.19
6RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4... 29 2.7
7PAHO_CAVPO (P13083) Pancreatic prohormone precursor (Pancreatic ... 29 3.5
8CN159_HUMAN (Q7Z3D6) Protein C14orf159, mitochondrial precursor 28 6.0
9CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor... 28 7.9
10Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1 28 7.9

>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)|
          Length = 458

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +3

Query: 156 IVSYGERSEEEVRRMYAEWMAEHGSTYNAIXXXXXXF*AFRDS 284
           IVSYGERSEEE RR+YAEW AEHG +YNA+      + AFRD+
Sbjct: 25  IVSYGERSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDN 67



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>CPR1_ARATH (Q9LT77) Probable cysteine proteinase At3g19400 precursor (EC|
           3.4.22.-)
          Length = 362

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 171 ERSEEEVRRMYAEWMAEHGSTYNAIXXXXXXF*AFRDS 284
           ER+E EVR MY +W+ E+   YN +      F  F+D+
Sbjct: 34  ERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDN 71



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>CPR2_ARATH (Q9LXW3) Probable cysteine proteinase At3g43960 precursor (EC|
           3.4.22.-)
          Length = 376

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 171 ERSEEEVRRMYAEWMAEHGSTYNAIXXXXXXF*AFRDS 284
           +R+E EV  MY +W+ E+G  YN +      F  F+D+
Sbjct: 31  QRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDN 68



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>GCP1_ARATH (Q94B08) Germination-specific cysteine protease 1 precursor (EC|
           3.4.22.-)
          Length = 376

 Score = 34.3 bits (77), Expect = 0.084
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 174 RSEEEVRRMYAEWMAEHGSTYN 239
           R++EEVR +Y +W AEHG T N
Sbjct: 40  RTDEEVRSIYLQWSAEHGKTNN 61



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>ACTN_ACTCH (P00785) Actinidain precursor (EC 3.4.22.14) (Actinidin) (Allergen|
           Act c 1)
          Length = 380

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 11/38 (28%), Positives = 24/38 (63%)
 Frame = +3

Query: 171 ERSEEEVRRMYAEWMAEHGSTYNAIXXXXXXF*AFRDS 284
           +R+ +EV+ MY  W+ ++G +YN++      F  F+++
Sbjct: 32  QRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKET 69



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>RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4.22.-) (RD21)|
          Length = 462

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 168 GERSEEEVRRMYAEWMAEHG--STYNAIXXXXXXF*AFRDS 284
           G RSE EV  +Y  W+ +HG   + N++      F  F+D+
Sbjct: 39  GGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDN 79



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>PAHO_CAVPO (P13083) Pancreatic prohormone precursor (Pancreatic polypeptide)|
           (PP) [Contains: Pancreatic hormone; Pancreatic
           icosapeptide-like]
          Length = 126

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 276 GTPRSGAPPRGWRCTYCRA 220
           GT  SG+PP+ W C  CRA
Sbjct: 101 GTGVSGSPPKPWDCLPCRA 119



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>CN159_HUMAN (Q7Z3D6) Protein C14orf159, mitochondrial precursor|
          Length = 616

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 241 ALYVLPCSAIHSAYIRRTSSSLRSP*D 161
           ALY+L   A+HS Y+R+     R+P D
Sbjct: 529 ALYILYSCAVHSQYLRKAVGPSRAPGD 555



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>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
           (Flamingo 1) (mFmi1)
          Length = 2920

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 169 GSGARRRSGGCTPSGW 216
           GSG R  SG C P GW
Sbjct: 41  GSGGRSSSGACAPVGW 56



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>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1|
          Length = 1561

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 275 ERLEAALLLADGVVRTAVLRHPLGVHPPDLLLAPL 171
           E+L   L+  DG     + RHP+ +H  D + APL
Sbjct: 875 EQLVQKLMETDGDPNCVLWRHPILLHTKDTITAPL 909


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,612,282
Number of Sequences: 219361
Number of extensions: 380873
Number of successful extensions: 1372
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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