Clone Name | bart12e03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor | 45 | 1e-04 | 2 | UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor | 45 | 2e-04 | 3 | UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein... | 40 | 0.004 | 4 | CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor... | 30 | 3.9 | 5 | Y1914_BURMA (Q62IG1) UPF0176 protein BMA1914 | 30 | 6.6 |
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>UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor| Length = 287 Score = 45.4 bits (106), Expect = 1e-04 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 4/113 (3%) Frame = +1 Query: 154 SGVDAIGTYCAK---NGTSAET-QASIDQVLAALVPXXXXXXXXXXXXXXXXXXVWGLAQ 321 S D + T+C K N TS T +++ +L+ L V G+ Sbjct: 24 SDPDDMETFCMKSSRNTTSNTTYNKNLNTLLSTLSNQSSFANYYNLTTGLASDTVHGMFL 83 Query: 322 CRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCPLRYSTANFIGLADT 480 C GDV R C+ C+ A E+A +C + ++ C +RYS F+ +T Sbjct: 84 CTGDVNRTTCNACVKNATIEIAKNCTNHREAIIYNVDCMVRYSDKFFLTTLET 136 Score = 30.0 bits (66), Expect = 5.0 Identities = 12/49 (24%), Positives = 23/49 (46%) Frame = +1 Query: 313 LAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCPLRYSTAN 459 + QC D+ ++C+ CL A +E+ C ++ C + + T N Sbjct: 197 IVQCTPDLDPRNCTTCLKLALQELTECCGNQVWAFIYTPNCMVSFDTYN 245
>UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor| Length = 286 Score = 44.7 bits (104), Expect = 2e-04 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +1 Query: 304 VWGLAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCPLRYSTANFIGLADT 480 V G+ C GDV R C+ C+ A E+A +C + ++Y C +RYS F+ +T Sbjct: 79 VHGMFLCIGDVNRTTCNACVKNATIEIAKNCTNHREAIIYYFSCMVRYSDKFFLSTLET 137
>UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein 3 precursor| Length = 287 Score = 40.4 bits (93), Expect = 0.004 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 4/108 (3%) Frame = +1 Query: 154 SGVDAIGTYC---AKNGTSAET-QASIDQVLAALVPXXXXXXXXXXXXXXXXXXVWGLAQ 321 S D + T+C ++N T T +++ +L+ V+G+ Sbjct: 28 SETDHMDTFCIDSSRNTTGNTTYNKNLNTMLSTFRNQSSIVNNYNLTTGLASDTVYGMFL 87 Query: 322 CRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCPLRYSTANFI 465 C GDV C+ C+ A E+ +C + ++Y C +RYS F+ Sbjct: 88 CTGDVNITTCNNCVKNATIEIVKNCTNHREAIIYYIDCMVRYSDKFFL 135
>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth factor-like domains 2) (Epidermal growth factor-like 1) Length = 3312 Score = 30.4 bits (67), Expect = 3.9 Identities = 23/84 (27%), Positives = 32/84 (38%) Frame = +1 Query: 310 GLAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCPLRYSTANFIGLADTGYT 489 G CR + C+ C + A+ AS C RV YD CP + + G Sbjct: 2094 GQCPCRPGALGRQCNSCDSPFAEVTASGC------RVLYDACPKSLRSGVWWPQTKFGVL 2147 Query: 490 LILLNTQNATGVDLAAFDRAQGKL 561 + + A G + D AQG L Sbjct: 2148 ATVPCPRGALGAAVRLCDEAQGWL 2171
>Y1914_BURMA (Q62IG1) UPF0176 protein BMA1914| Length = 299 Score = 29.6 bits (65), Expect = 6.6 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +1 Query: 466 GLADTGYTLILLNTQNATGVDLAAFDRA 549 G D G +++L+T+NA VD+ FDRA Sbjct: 128 GHDDAGRPVVMLDTRNAFEVDVGTFDRA 155 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,065,406 Number of Sequences: 219361 Number of extensions: 512661 Number of successful extensions: 1489 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1489 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)