Clone Information

BLAST Search Result

Clone Name	bart12e02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	BSH_ARATH (P93045) Chromatin structure remodeling complex protei...	234	1e-61
2	SNF5_BRARE (Q5U379) SWI/SNF-related, matrix-associated, actin-de...	90	4e-18
3	SNF5_CHICK (Q5ZK40) SWI/SNF-related, matrix-associated, actin-de...	89	1e-17
4	SNF5_MOUSE (Q9Z0H3) SWI/SNF-related, matrix-associated, actin-de...	89	1e-17
5	SNF5_HUMAN (Q12824) SWI/SNF-related, matrix-associated, actin-de...	89	1e-17
6	SNF5_BOVIN (Q5BIN2) SWI/SNF-related, matrix-associated, actin-de...	89	1e-17
7	SNF5_XENTR (Q6DFM1) SWI/SNF-related, matrix-associated, actin-de...	88	2e-17
8	SNF5_XENLA (Q6GQ82) SWI/SNF-related, matrix-associated, actin-de...	88	2e-17
9	SNF5_TETFL (O42467) SWI/SNF-related, matrix-associated, actin-de...	85	1e-16
10	SFH1_YARLI (Q6C9N2) Chromatin structure remodeling complex prote...	69	1e-11
11	SNF5_YEAST (P18480) Transcription regulatory protein SNF5 (SWI/S...	67	5e-11
12	YA28_SCHPO (Q09699) Hypothetical protein C2F7.08c in chromosome I	62	2e-09
13	SFH1_KLULA (Q6CSR7) Chromatin structure remodeling complex prote...	59	1e-08
14	SFH1_ASHGO (Q754R8) Chromatin structure remodeling complex prote...	58	2e-08
15	SFH1_YEAST (Q06168) Chromatin structure remodeling complex prote...	57	3e-08
16	SFH1_SCHPO (Q9USM3) Chromatin structure remodeling complex prote...	54	3e-07
17	SFH1_CANGA (Q6FTV3) Chromatin structure remodeling complex prote...	50	4e-06
18	RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis prote...	35	0.21
19	CSRA_DESVH (Q72EP8) Carbon storage regulator homolog	33	0.61
20	LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-bind...	32	1.0
21	LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-bind...	32	1.4
22	KIF2C_RAT (Q62909) Kinesin-like protein KIF2C (Mitotic centromer...	32	1.8
23	ENT2_YEAST (Q05785) Epsin-2	32	1.8
24	CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)	32	1.8
25	RIMS1_MOUSE (Q99NE5) Regulating synaptic membrane exocytosis pro...	31	3.0
26	IPL1_YEAST (P38991) Spindle assembly checkpoint kinase (EC 2.7.1...	30	4.0
27	AGO2_DROME (Q9VUQ5) Argonaute 2 protein	30	5.2
28	EFTS_ONYPE (P61337) Elongation factor Ts (EF-Ts)	30	5.2
29	FOXE3_HUMAN (Q13461) Forkhead box protein E3 (Forkhead-related p...	30	5.2
30	COL19_CAEEL (P18835) Cuticle collagen 19 precursor	30	5.2
31	ORN_PSESM (Q87VI6) Oligoribonuclease (EC 3.1.-.-)	30	5.2
32	STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chlo...	30	6.7
33	RIBD_CHLMU (Q9PLJ6) Riboflavin biosynthesis protein ribD [Includ...	30	6.7
34	SYQ_RALSO (Q8Y199) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu...	30	6.7
35	ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (1...	30	6.7
36	ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (1...	30	6.7
37	ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (1...	30	6.7
38	VE4_HPV08 (P06425) Probable protein E4	30	6.7
39	PUR7_WOLSU (Q7M9X5) Phosphoribosylaminoimidazole-succinocarboxam...	30	6.7
40	MSHM_SARGL (O63852) Mitochondrial MutS protein homolog	29	8.8
41	CSRA3_PSESM (Q87Z65) Carbon storage regulator homolog 3	29	8.8
42	IER2_HUMAN (Q9BTL4) Immediate early response gene 2 protein (Pro...	29	8.8
43	ATG2_PICPA (Q9HFR4) Autophagy-related protein 2 (Glucose-induced...	29	8.8
44	HIS1_HALSA (Q9HN53) ATP phosphoribosyltransferase (EC 2.4.2.17) ...	29	8.8
45	DPY7_CAEEL (P34688) Cuticle collagen dpy-7 precursor (Protein du...	29	8.8

>BSH_ARATH (P93045) Chromatin structure remodeling complex protein BSH|
           (Protein bushy) (SNF5 homolog)
          Length = 240

 Score =  234 bits (597), Expect = 1e-61
 Identities = 107/153 (69%), Positives = 131/153 (85%)
 Frame = +3

Query: 129 VKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQ 308
           VKFRMPT +NLVPIR+DI+ +GQRY+DAFTWNP DPD+EV+ FAKRT K+LKLP  FV Q
Sbjct: 13  VKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTVKDLKLPYAFVTQ 72

Query: 309 MLHSIQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFAR 488
           +  SIQ QL++FR+YEGQ+M   EKI+P+K+DLRVN+T+++DQFLWD+ N ESDPEEFAR
Sbjct: 73  IAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDLNNFESDPEEFAR 132

Query: 489 TLCDDLNITDPEVGPAIAVCIREQLYEIASQTV 587
           TLC DL + DPEVGPA+A  IREQLYEIA Q+V
Sbjct: 133 TLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSV 165

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>SNF5_BRARE (Q5U379) SWI/SNF-related, matrix-associated, actin-dependent|
           regulator of chromatin subfamily B member 1
          Length = 373

 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 335
           LVPIR+D+E+DGQ+ RDAFTWN  +       FA+    +L L P TFVP +  +I+ Q+
Sbjct: 174 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQQI 233

Query: 336 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 515
             + +    + Q+ ++++ +K+++ V N  + DQF WD+   E+ PE+FA  LC +L + 
Sbjct: 234 ESYPTDSILDEQMDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 291

Query: 516 DPEVGPAIAVCIREQL 563
             E    IA  IR QL
Sbjct: 292 GGEFVTTIAYSIRGQL 307



 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 23/71 (32%), Positives = 43/71 (60%)
 Frame = +3

Query: 375 KEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIR 554
           +E ++P+++D+ ++   +RD F W++      PE FA  LCDDL+++     PAIA  IR
Sbjct: 171 QEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIR 230

Query: 555 EQLYEIASQTV 587
           +Q+    + ++
Sbjct: 231 QQIESYPTDSI 241



 Score = 38.5 bits (88), Expect = 0.015
 Identities = 27/96 (28%), Positives = 46/96 (47%)
 Frame = +3

Query: 153 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 332
           D  V I+++I V      D F W+  + ++    FA +   EL L   FV  + +SI+GQ
Sbjct: 247 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 306

Query: 333 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 440
           L    S+  +     E  +P  +++ + NT   DQ+
Sbjct: 307 L----SWHQRTYAFSENPLP-TVEIAIRNTGDADQW 337

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>SNF5_CHICK (Q5ZK40) SWI/SNF-related, matrix-associated, actin-dependent|
           regulator of chromatin subfamily B member 1
          Length = 386

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 335
           LVPIR+D+E+DGQ+ RDAFTWN  +       F++    +L L P TFVP +  +I+ Q+
Sbjct: 187 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQI 246

Query: 336 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 515
             + +    E Q  ++++ +K+++ V N  + DQF WD+   E+ PE+FA  LC +L + 
Sbjct: 247 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 304

Query: 516 DPEVGPAIAVCIREQL 563
             E    IA  IR QL
Sbjct: 305 GGEFVTTIAYSIRGQL 320



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 22/70 (31%), Positives = 41/70 (58%)
 Frame = +3

Query: 378 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 557
           E ++P+++D+ ++   +RD F W++      PE F+  LCDDL++      PAIA  IR+
Sbjct: 185 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQ 244

Query: 558 QLYEIASQTV 587
           Q+    + ++
Sbjct: 245 QIESYPTDSI 254



 Score = 38.5 bits (88), Expect = 0.015
 Identities = 27/96 (28%), Positives = 46/96 (47%)
 Frame = +3

Query: 153 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 332
           D  V I+++I V      D F W+  + ++    FA +   EL L   FV  + +SI+GQ
Sbjct: 260 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 319

Query: 333 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 440
           L    S+  +     E  +P  +++ + NT   DQ+
Sbjct: 320 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 350

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>SNF5_MOUSE (Q9Z0H3) SWI/SNF-related, matrix-associated, actin-dependent|
           regulator of chromatin subfamily B member 1 (Integrase
           interactor 1 protein) (mSNF5)
          Length = 385

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 335
           LVPIR+D+E+DGQ+ RDAFTWN  +       F++    +L L P TFVP +  +I+ Q+
Sbjct: 186 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQI 245

Query: 336 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 515
             + +    E Q  ++++ +K+++ V N  + DQF WD+   E+ PE+FA  LC +L + 
Sbjct: 246 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 303

Query: 516 DPEVGPAIAVCIREQL 563
             E    IA  IR QL
Sbjct: 304 GGEFVTTIAYSIRGQL 319



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 22/70 (31%), Positives = 41/70 (58%)
 Frame = +3

Query: 378 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 557
           E ++P+++D+ ++   +RD F W++      PE F+  LCDDL++      PAIA  IR+
Sbjct: 184 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQ 243

Query: 558 QLYEIASQTV 587
           Q+    + ++
Sbjct: 244 QIESYPTDSI 253



 Score = 38.5 bits (88), Expect = 0.015
 Identities = 27/96 (28%), Positives = 46/96 (47%)
 Frame = +3

Query: 153 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 332
           D  V I+++I V      D F W+  + ++    FA +   EL L   FV  + +SI+GQ
Sbjct: 259 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 318

Query: 333 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 440
           L    S+  +     E  +P  +++ + NT   DQ+
Sbjct: 319 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 349

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>SNF5_HUMAN (Q12824) SWI/SNF-related, matrix-associated, actin-dependent|
           regulator of chromatin subfamily B member 1 (Integrase
           interactor 1 protein) (hSNF5) (BAF47)
          Length = 385

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 335
           LVPIR+D+E+DGQ+ RDAFTWN  +       F++    +L L P TFVP +  +I+ Q+
Sbjct: 186 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQI 245

Query: 336 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 515
             + +    E Q  ++++ +K+++ V N  + DQF WD+   E+ PE+FA  LC +L + 
Sbjct: 246 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 303

Query: 516 DPEVGPAIAVCIREQL 563
             E    IA  IR QL
Sbjct: 304 GGEFVTTIAYSIRGQL 319



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 22/70 (31%), Positives = 41/70 (58%)
 Frame = +3

Query: 378 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 557
           E ++P+++D+ ++   +RD F W++      PE F+  LCDDL++      PAIA  IR+
Sbjct: 184 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQ 243

Query: 558 QLYEIASQTV 587
           Q+    + ++
Sbjct: 244 QIESYPTDSI 253



 Score = 38.5 bits (88), Expect = 0.015
 Identities = 27/96 (28%), Positives = 46/96 (47%)
 Frame = +3

Query: 153 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 332
           D  V I+++I V      D F W+  + ++    FA +   EL L   FV  + +SI+GQ
Sbjct: 259 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 318

Query: 333 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 440
           L    S+  +     E  +P  +++ + NT   DQ+
Sbjct: 319 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 349

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>SNF5_BOVIN (Q5BIN2) SWI/SNF-related, matrix-associated, actin-dependent|
           regulator of chromatin subfamily B member 1
          Length = 385

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 335
           LVPIR+D+E+DGQ+ RDAFTWN  +       F++    +L L P TFVP +  +I+ Q+
Sbjct: 186 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQI 245

Query: 336 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 515
             + +    E Q  ++++ +K+++ V N  + DQF WD+   E+ PE+FA  LC +L + 
Sbjct: 246 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 303

Query: 516 DPEVGPAIAVCIREQL 563
             E    IA  IR QL
Sbjct: 304 GGEFVTTIAYSIRGQL 319



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 22/70 (31%), Positives = 41/70 (58%)
 Frame = +3

Query: 378 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 557
           E ++P+++D+ ++   +RD F W++      PE F+  LCDDL++      PAIA  IR+
Sbjct: 184 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQ 243

Query: 558 QLYEIASQTV 587
           Q+    + ++
Sbjct: 244 QIESYPTDSI 253



 Score = 38.5 bits (88), Expect = 0.015
 Identities = 27/96 (28%), Positives = 46/96 (47%)
 Frame = +3

Query: 153 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 332
           D  V I+++I V      D F W+  + ++    FA +   EL L   FV  + +SI+GQ
Sbjct: 259 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 318

Query: 333 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 440
           L    S+  +     E  +P  +++ + NT   DQ+
Sbjct: 319 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 349

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>SNF5_XENTR (Q6DFM1) SWI/SNF-related, matrix-associated, actin-dependent|
           regulator of chromatin subfamily B member 1
          Length = 378

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 335
           LVPIR+D+E+DGQ+ RDAFTWN  +       FA+    +L L P  FVP +  +I+ Q+
Sbjct: 179 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQI 238

Query: 336 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 515
             + +    E Q  ++++ +K+++ V N  + DQF WD+   E+ PE+FA  LC +L + 
Sbjct: 239 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 296

Query: 516 DPEVGPAIAVCIREQL 563
             E    IA  IR QL
Sbjct: 297 GGEFVTTIAYSIRGQL 312



 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 23/70 (32%), Positives = 41/70 (58%)
 Frame = +3

Query: 378 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 557
           E ++P+++D+ ++   +RD F W++      PE FA  LCDDL++      PAIA  IR+
Sbjct: 177 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQ 236

Query: 558 QLYEIASQTV 587
           Q+    + ++
Sbjct: 237 QIESYPTDSI 246



 Score = 38.5 bits (88), Expect = 0.015
 Identities = 27/96 (28%), Positives = 46/96 (47%)
 Frame = +3

Query: 153 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 332
           D  V I+++I V      D F W+  + ++    FA +   EL L   FV  + +SI+GQ
Sbjct: 252 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 311

Query: 333 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 440
           L    S+  +     E  +P  +++ + NT   DQ+
Sbjct: 312 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 342

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>SNF5_XENLA (Q6GQ82) SWI/SNF-related, matrix-associated, actin-dependent|
           regulator of chromatin subfamily B member 1
          Length = 378

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 335
           LVPIR+D+E+DGQ+ RDAFTWN  +       FA+    +L L P  FVP +  +I+ Q+
Sbjct: 179 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQI 238

Query: 336 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 515
             + +    E Q  ++++ +K+++ V N  + DQF WD+   E+ PE+FA  LC +L + 
Sbjct: 239 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 296

Query: 516 DPEVGPAIAVCIREQL 563
             E    IA  IR QL
Sbjct: 297 GGEFVTTIAYSIRGQL 312



 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 23/70 (32%), Positives = 41/70 (58%)
 Frame = +3

Query: 378 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 557
           E ++P+++D+ ++   +RD F W++      PE FA  LCDDL++      PAIA  IR+
Sbjct: 177 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQ 236

Query: 558 QLYEIASQTV 587
           Q+    + ++
Sbjct: 237 QIESYPTDSI 246



 Score = 38.5 bits (88), Expect = 0.015
 Identities = 27/96 (28%), Positives = 46/96 (47%)
 Frame = +3

Query: 153 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 332
           D  V I+++I V      D F W+  + ++    FA +   EL L   FV  + +SI+GQ
Sbjct: 252 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 311

Query: 333 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 440
           L    S+  +     E  +P  +++ + NT   DQ+
Sbjct: 312 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 342

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>SNF5_TETFL (O42467) SWI/SNF-related, matrix-associated, actin-dependent|
           regulator of chromatin subfamily B member 1
          Length = 373

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 335
           LVPIR+D+E++GQ+ RDAFTWN  +       FA+    +L L P  FVP +  +I+ Q+
Sbjct: 174 LVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIPSAIRQQI 233

Query: 336 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 515
             + +    E Q  ++++ +K+++ V N  + DQF WD+   E+ PE+FA  LC +L   
Sbjct: 234 ESYPTDAILEEQTDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELG-Q 291

Query: 516 DPEVGPAIAVCIREQL 563
             E    IA  IR QL
Sbjct: 292 GGEFVTTIAYSIRGQL 307



 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = +3

Query: 378 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 557
           E ++P+++D+ +    +RD F W++      PE FA  LCDDL++      PAI   IR+
Sbjct: 172 EVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIPSAIRQ 231

Query: 558 QL 563
           Q+
Sbjct: 232 QI 233



 Score = 37.4 bits (85), Expect = 0.032
 Identities = 26/96 (27%), Positives = 45/96 (46%)
 Frame = +3

Query: 153 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 332
           D  V I+++I V      D F W+  + ++    FA +   EL     FV  + +SI+GQ
Sbjct: 247 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGQGGEFVTTIAYSIRGQ 306

Query: 333 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 440
           L    S+  +     E  +P  +++ + NT   DQ+
Sbjct: 307 L----SWHQKAYAFSENPLP-TVEIAIRNTGAADQW 337

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>SFH1_YARLI (Q6C9N2) Chromatin structure remodeling complex protein SFH1 (SNF5|
           homolog 1)
          Length = 441

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
 Frame = +3

Query: 159 LVPIRVDIE-VDGQRYRDAFTWNPRDPDSEVIT---FAKRTAKELKLPATFVPQMLHSIQ 326
           L+PIRV +E +D  R +D F W   D D +++T   FA  T  +L +P  +  QM   I+
Sbjct: 205 LIPIRVAVENIDVFRVQDFFLW---DADEKILTPEQFATLTCADLDVPIGYSAQMSAQIK 261

Query: 327 GQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDL 506
            QLAE+ +       V+  ++ +++ + V+  +  D+F WD+    + P+EFART+  DL
Sbjct: 262 KQLAEYTAAPALPKDVEVHVI-VELAVTVDKIVYEDKFEWDLSGEYATPQEFARTVVQDL 320

Query: 507 NITDPEVGPAIAVCIREQLYE 569
            +   E  PAI      QLYE
Sbjct: 321 GL-GQEFYPAITY----QLYE 336

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>SNF5_YEAST (P18480) Transcription regulatory protein SNF5 (SWI/SNF complex|
           component SNF5) (Transcription factor TYE4)
          Length = 905

 Score = 66.6 bits (161), Expect = 5e-11
 Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
 Frame = +3

Query: 147 TRDNLVPIRVDIEVDGQRY--RDAFTWNPRDPDSEVITFAKRTAKELKLPAT----FVPQ 308
           T + LVPIR++ + D  R+  RD   WN  D   ++  F     ++ +         +  
Sbjct: 453 TSEQLVPIRLEFDQDRDRFFLRDTLLWNKNDKLIKIEDFVDDMLRDYRFEDATREQHIDT 512

Query: 309 MLHSIQGQLAEFRSYE----------GQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGN 458
           +  SIQ Q+ EF+             G +++++     +K+D+ V    + DQF W+I N
Sbjct: 513 ICQSIQEQIQEFQGNPYIELNQDRLGGDDLRIR-----IKLDIVVGQNQLIDQFEWEISN 567

Query: 459 LESDPEEFARTLCDDLNITDPEVGPAIAVCIREQLY 566
            ++ PEEFA ++C +L +   E   AIA  IREQ++
Sbjct: 568 SDNCPEEFAESMCQELELPG-EFVTAIAHSIREQVH 602



 Score = 39.3 bits (90), Expect = 0.009
 Identities = 24/76 (31%), Positives = 38/76 (50%)
 Frame = +3

Query: 108 GAPRSSTVKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL 287
           G P     + R+   D  + I++DI V   +  D F W   + D+    FA+   +EL+L
Sbjct: 526 GNPYIELNQDRLGGDDLRIRIKLDIVVGQNQLIDQFEWEISNSDNCPEEFAESMCQELEL 585

Query: 288 PATFVPQMLHSIQGQL 335
           P  FV  + HSI+ Q+
Sbjct: 586 PGEFVTAIAHSIREQV 601

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>YA28_SCHPO (Q09699) Hypothetical protein C2F7.08c in chromosome I|
          Length = 632

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 37/185 (20%)
 Frame = +3

Query: 117 RSSTVKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLP-- 290
           RS+  + ++P   +LVPIR++I+ D  + RD+FTWN  D    +  FA++   +  +P  
Sbjct: 129 RSNLAQSKLPV--DLVPIRLEIDADRYKLRDSFTWNLYDKCISLDQFAEQICIDYDIPLH 186

Query: 291 -ATFVPQMLHSIQGQLAEFRSYEGQE-------------------------MQVKEKIMP 392
               V  +  SIQ Q+ ++   + Q                           +  ++ +P
Sbjct: 187 NVHIVQNISKSIQAQINDYEPRKAQSNLSFVSDVSSSTSETVYAHEPSDSLAKASKQQIP 246

Query: 393 ---------LKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAV 545
                    +K+D+ +    + DQF W++   ES  EEFA  +C DL ++  E   A+A 
Sbjct: 247 TVQNDLRILIKLDITIGRLNLIDQFEWNLFAPESSAEEFATVMCLDLGLSG-EFCTAVAH 305

Query: 546 CIREQ 560
            IREQ
Sbjct: 306 SIREQ 310



 Score = 36.2 bits (82), Expect = 0.072
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
 Frame = +3

Query: 132 KFRMPTRDN--LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVP 305
           K ++PT  N   + I++DI +      D F WN   P+S    FA     +L L   F  
Sbjct: 242 KQQIPTVQNDLRILIKLDITIGRLNLIDQFEWNLFAPESSAEEFATVMCLDLGLSGEFCT 301

Query: 306 QMLHSIQGQLAEFRSY--------EGQEMQVKEK----IMPLKIDLRVNN 419
            + HSI+ Q   +  Y        +G E++ +E     + PLK  LR ++
Sbjct: 302 AVAHSIREQCQMYIKYLSLIGYLFDGSEIEDEEVRSYILPPLKNTLRFSD 351

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>SFH1_KLULA (Q6CSR7) Chromatin structure remodeling complex protein SFH1 (SNF5|
           homolog 1)
          Length = 442

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVP------QMLHS 320
           +VPIR+++E  G +  D F WN  D       FA    ++L  P    P      Q++  
Sbjct: 210 MVPIRLNVEFSGHKLADFFMWNLNDHSMTPEQFATILCQDLDFPVLSNPNNSPYTQIISM 269

Query: 321 IQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCD 500
           I  QL E+ +     +QV +  + + +   +++ +  D F W++ +    PE+FA  +  
Sbjct: 270 INEQLQEYETL--ASLQVPDLHVIINLTANLDSKLYDDTFEWNLNDDSLCPEQFAELVVQ 327

Query: 501 DLNITDPEVGPAIAVCIREQLYEI 572
           DL +   E  PAIA  + E L ++
Sbjct: 328 DLGL-QREFVPAIAHSLHESLLKV 350



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
 Frame = +3

Query: 282 KLPATFVPQMLHSIQGQLAEFRSYEGQEMQVKEKIM-PLKIDLRVNNTIVRDQFLWDIGN 458
           ++  TFV   +      L      + Q++ ++  IM P+++++  +   + D F+W++ +
Sbjct: 175 RIRETFVQSRIAISYKDLLGDSIQDPQQVDIESPIMVPIRLNVEFSGHKLADFFMWNLND 234

Query: 459 LESDPEEFARTLCDDLN---ITDPEVGP--AIAVCIREQLYE 569
               PE+FA  LC DL+   +++P   P   I   I EQL E
Sbjct: 235 HSMTPEQFATILCQDLDFPVLSNPNNSPYTQIISMINEQLQE 276



 Score = 35.8 bits (81), Expect = 0.094
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 162 VPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQLAE 341
           V I +   +D + Y D F WN  D       FA+   ++L L   FVP + HS+   L +
Sbjct: 290 VIINLTANLDSKLYDDTFEWNLNDDSLCPEQFAELVVQDLGLQREFVPAIAHSLHESLLK 349

Query: 342 FR 347
            +
Sbjct: 350 VK 351

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>SFH1_ASHGO (Q754R8) Chromatin structure remodeling complex protein SFH1 (SNF5|
           homolog 1)
          Length = 383

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLP--ATFVPQMLHSIQGQ 332
           ++PIR+++E +G +  D FTWN  D    +  FA+   ++L      +   Q++ +I  Q
Sbjct: 155 VIPIRLNLEHNGHKIIDFFTWNLNDHSLTLEQFAQIYCQDLDFAHNLSLQNQIVAAINDQ 214

Query: 333 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNI 512
           L E+ +     + V +  + + +   +++ +  D F W++ +    PE+FA  +  DL +
Sbjct: 215 LQEYETL--ASVVVPDLHVIINLTCNLDSKLYEDNFEWNLNDQTLSPEQFAELVVQDLGL 272

Query: 513 TDPEVGPAIAVCIREQLYEI 572
           T  E  PAIA  + E + +I
Sbjct: 273 T-REFMPAIAHALYESILKI 291



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +3

Query: 162 VPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQLAE 341
           V I +   +D + Y D F WN  D       FA+   ++L L   F+P + H++   + +
Sbjct: 231 VIINLTCNLDSKLYEDNFEWNLNDQTLSPEQFAELVVQDLGLTREFMPAIAHALYESILK 290

Query: 342 FR 347
            +
Sbjct: 291 IK 292

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>SFH1_YEAST (Q06168) Chromatin structure remodeling complex protein SFH1 (SNF5|
           homolog 1)
          Length = 426

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 335
           ++PI +DIE  G   +D F WN  D       FA    K+L +  AT   Q+ + I+ QL
Sbjct: 203 MIPITLDIEHMGHTIKDQFLWNYNDDSISPEEFASIYCKDLDMTSATLQTQIANIIKEQL 262

Query: 336 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 515
            +  +    E+     ++ + +   + +    D F W++ +    PE FA ++  DL +T
Sbjct: 263 KDLENIAATEIMSDLHVI-INLTCNLQDRFFEDNFQWNLNDKSLTPERFATSIVQDLGLT 321

Query: 516 DPEVGPAIAVCIREQLYEIASQTV 587
             E  P I+  + E + +I    V
Sbjct: 322 -REFIPLISQSLHETILKIKKDWV 344

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>SFH1_SCHPO (Q9USM3) Chromatin structure remodeling complex protein SFH1 (SNF5|
           homolog 1)
          Length = 418

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
 Frame = +3

Query: 150 RDNLVPIRVDIEV-DGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPA-TFVPQMLHSI 323
           RD  +PIR+DIE+ +  R +D F WN  +       FA+    +L L    +  Q+  SI
Sbjct: 114 RDVYIPIRLDIELPNNYRLKDTFLWNMNEQVMTPDVFAQILCADLDLSTNVYGTQISSSI 173

Query: 324 QGQLAEFRSYEGQEM-QVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCD 500
           + Q+ E+       M + +E ++   I +++      DQ  W++ +    PEEF+   C+
Sbjct: 174 RAQIEEYAPVAEVPMPKGQEMLVVFNIQVQLAQLSYNDQVEWNLTS-PLTPEEFSVLTCN 232

Query: 501 DLNITDPEVGPAIAVCIREQLYEI 572
           DL ++  E  P IA  I E L ++
Sbjct: 233 DLGLSG-ESRPEIAYAIHECLLKL 255



 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +3

Query: 375 KEKIMPLKIDLRV-NNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCI 551
           ++  +P+++D+ + NN  ++D FLW++      P+ FA+ LC DL+++    G  I+  I
Sbjct: 114 RDVYIPIRLDIELPNNYRLKDTFLWNMNEQVMTPDVFAQILCADLDLSTNVYGTQISSSI 173

Query: 552 REQLYEIA 575
           R Q+ E A
Sbjct: 174 RAQIEEYA 181

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>SFH1_CANGA (Q6FTV3) Chromatin structure remodeling complex protein SFH1 (SNF5|
           homolog 1)
          Length = 403

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 2/143 (1%)
 Frame = +3

Query: 159 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL--PATFVPQMLHSIQGQ 332
           L+PI +++E       DAF WN  D    V  F      +L L    +   Q++ SI  Q
Sbjct: 177 LIPITLNVEHGNNTISDAFVWNVNDTSISVEDFVTTYCNDLGLYGNVSLHSQIVSSINEQ 236

Query: 333 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNI 512
           + E  +     + + +  + + +   +      D F W++ +    PE+FA  +  DL +
Sbjct: 237 IQELENV--ASLVIPDLEVVVNLTCTIQGKFFEDYFQWNLSDKSLSPEKFALIIVADLGL 294

Query: 513 TDPEVGPAIAVCIREQLYEIASQ 581
              E  P IA  + E L  +  +
Sbjct: 295 A-REFAPGIAHSLHEYLLHVKKE 316



 Score = 38.1 bits (87), Expect = 0.019
 Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = +3

Query: 342 FRSYEGQEMQVKEK---IMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNI 512
           +R Y   E+   ++   ++P+ +++   N  + D F+W++ +     E+F  T C+DL +
Sbjct: 160 YRLYVPPELSTGQQEAILIPITLNVEHGNNTISDAFVWNVNDTSISVEDFVTTYCNDLGL 219

Query: 513 -TDPEVGPAIAVCIREQLYEI 572
             +  +   I   I EQ+ E+
Sbjct: 220 YGNVSLHSQIVSSINEQIQEL 240

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>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1)
          Length = 1615

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
 Frame = +2

Query: 134 VPHADEGQPGADTRRHRGGRPALQG---------RLHLEPPRSRLGGHHLRQEDGQGAQA 286
           V   D   PGA   R++G  P+ Q          R   EPPR R     L +++G+G Q 
Sbjct: 250 VSSQDTATPGAPLHRNKGAEPSQQALGPEQKQASRSRSEPPRERKKAPGLSEQNGKGGQK 309

Query: 287 SGHLCPSDAPLHPG 328
           S       + + PG
Sbjct: 310 SERKRVPKSVVQPG 323

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>CSRA_DESVH (Q72EP8) Carbon storage regulator homolog|
          Length = 78

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 272 GRPLGEGDDLRVGIAGVPGEGVPVALAVHLDVDAYRHQVVPR 147
           G  L  GDD+R+ + G+ G+ V + + V  D+  YR +V  R
Sbjct: 9   GESLHLGDDIRITVLGIQGKQVKIGIEVPGDMVVYREEVYRR 50

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>LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-binding protein 3|
           precursor (LTBP-3)
          Length = 1302

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +2

Query: 158 PGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQASGHLCPSDAPLHP 325
           PG  +   +   P +  R+H  PP + +  H +   + + A  S HL P   P HP
Sbjct: 213 PGQISAEVQAPPPVVNVRVH-HPPEASVQVHRIESSNAESAAPSQHLLPHPKPSHP 267

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>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3|
           precursor (LTBP-3)
          Length = 1268

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +2

Query: 158 PGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQASGHLCPSDAPLHP 325
           PG  +   +   P +  R+H  PP + +  H +   + +G  +S HL P   P HP
Sbjct: 211 PGQISAEVQAPPPVVNVRVH-HPPEASVQVHRIEGPNAEGPASSQHLLPHPKPPHP 265

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>KIF2C_RAT (Q62909) Kinesin-like protein KIF2C (Mitotic centromere-associated|
           kinesin) (MCAK) (Kinesin-related protein 2)
          Length = 671

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
 Frame = +3

Query: 117 RSSTV-KFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPA 293
           R STV + R+P ++N + + + +  + ++     T +PR   S V      T   L + +
Sbjct: 59  RISTVSEVRIPAQENEMEVELPVSTNSRKPFPIHTGHPRPSCSTV------TELPLLMIS 112

Query: 294 TFVPQMLHSIQ-------GQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDI 452
               +  HS +       G     +S   +EM   EK+   + + R  N+ +R +   + 
Sbjct: 113 EEAEEQAHSTRSTSSANPGNSVRRKSCIVKEM---EKMKNKREEKRAQNSEIRIKRAQEY 169

Query: 453 GNLESDPE-EFARTL--------CDDLNITDPEVGPAIAVCIREQ 560
            N  S P  EFAR +        C+ L +TDP     I VC+R++
Sbjct: 170 DN--SFPNWEFARMIKEFRVTMDCNPLTVTDPIEEHRICVCVRKR 212

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>ENT2_YEAST (Q05785) Epsin-2|
          Length = 613

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 25/110 (22%), Positives = 45/110 (40%)
 Frame = +3

Query: 114 PRSSTVKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPA 293
           P  S+  ++      L   R+  + D QR R+   ++  DPD +      +  +ELK   
Sbjct: 169 PHDSSPSYQDDLEKALEESRITAQEDEQRRRELAQYDDEDPDFQAALQLSKEEEELK--- 225

Query: 294 TFVPQMLHSIQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFL 443
               Q L  +Q Q      ++    Q + +  P   D+   N I +D++L
Sbjct: 226 --QLQELQRLQKQQQSLSQFQAPLQQQQPQQQPAYYDI-FGNPISQDEYL 272

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>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
 Frame = +2

Query: 152 GQPGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQ--ASGHLCPSDAPLHP 325
           G PG+D R  + GRP ++G+   +  +   G   L    G+     A G    + AP  P
Sbjct: 373 GNPGSDGRPGKDGRPGIRGKDGKQGEQGPQGPQGLAGLQGRAGPPGARGEPGKNGAPGEP 432

Query: 326 GAIGRVPFLRGAGDAGQ 376
           GA G        GDAG+
Sbjct: 433 GAHGE------QGDAGK 443

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>RIMS1_MOUSE (Q99NE5) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1) (Rab3-interacting
           protein 1) (Fragment)
          Length = 388

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
 Frame = +2

Query: 134 VPHADEGQPGADTRRHRGGRPALQG---------RLHLEPPRSRLGGHHLRQEDGQGAQA 286
           V   D    GA   R++G  P+ Q          R   EPPR R     L +++G+G Q 
Sbjct: 250 VSSQDTASHGAPLDRNKGAEPSQQALGPEQKQASRSRSEPPRERKKAPGLSEQNGKGGQK 309

Query: 287 SGHLCPSDAPLHPG 328
           S       + + PG
Sbjct: 310 SERKRVPKSVVQPG 323

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>IPL1_YEAST (P38991) Spindle assembly checkpoint kinase (EC 2.7.11.1) (Aurora|
           kinase) (Increase-in-ploidy protein 1)
          Length = 367

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = +3

Query: 273 KELKLPATFVPQMLHSIQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDI 452
           K L+L   F   +      Q+A    Y  ++  +   I P  I +  NN I    F W I
Sbjct: 191 KLLRLHGPFNDILASDYIYQIANALDYMHKKNIIHRDIKPENILIGFNNVIKLTDFGWSI 250

Query: 453 GNLESDPEEFARTLCDDLNITDPEV 527
            N    PE   +T+C  ++   PE+
Sbjct: 251 IN---PPENRRKTVCGTIDYLSPEM 272

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>AGO2_DROME (Q9VUQ5) Argonaute 2 protein|
          Length = 1214

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 24/87 (27%), Positives = 32/87 (36%)
 Frame = +2

Query: 158 PGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQASGHLCPSDAPLHPGAIG 337
           PG     H+ GR   +G     PP  + GGH   Q+  QG +      PS         G
Sbjct: 138 PGQQQGGHQQGRQGQEGGYQQRPPGQQQGGH---QQGRQGQEGGYQQRPSGQQQGGHQQG 194

Query: 338 RVPFLRGAGDAGQGEDYAPQD*PPSEQ 418
           R           QG++   Q  PP +Q
Sbjct: 195 R-----------QGQEGGYQQRPPGQQ 210

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>EFTS_ONYPE (P61337) Elongation factor Ts (EF-Ts)|
          Length = 274

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +3

Query: 261 KRTAKELK-LPATFVPQMLHSIQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQ 437
           K+TAKEL   PA  + +++ +  G++ +      Q   VK     +K  L+ NNT V   
Sbjct: 209 KQTAKELSDKPAQMIEKIVENRLGKMLKDMCLSEQPF-VKNADQKVKDYLKANNTDVVSY 267

Query: 438 FLWDIGN 458
             W++GN
Sbjct: 268 VRWEMGN 274

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>FOXE3_HUMAN (Q13461) Forkhead box protein E3 (Forkhead-related protein FKHL12)|
           (Forkhead-related transcription factor 8) (FREAC-8)
          Length = 319

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 23/69 (33%), Positives = 27/69 (39%)
 Frame = +2

Query: 152 GQPGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQASGHLCPSDAPLHPGA 331
           G+   D      G PAL       PP S L G    +E  + A   G   P+ AP  PG 
Sbjct: 3   GRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAAGRGEAAPTPAP-GPGR 61

Query: 332 IGRVPFLRG 358
             R P  RG
Sbjct: 62  RRRRPLQRG 70

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>COL19_CAEEL (P18835) Cuticle collagen 19 precursor|
          Length = 289

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
 Frame = +2

Query: 137 PHADEGQPGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQA--SGHLCPSD 310
           P    G+PG + +  + GRP  QG      PR   G        G   +A  +G+     
Sbjct: 199 PAGPRGEPGTEYKPGQPGRPGPQG------PRGETGPAGNPGAPGNDGEAGKNGNAGRPG 252

Query: 311 APLHPGAIGRVPFLRGAGDAGQGED--YAP 394
            P HPG  G VP  +G  DA  G D  Y P
Sbjct: 253 PPGHPGKNG-VPGQKGE-DAAPGPDAGYCP 280

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>ORN_PSESM (Q87VI6) Oligoribonuclease (EC 3.1.-.-)|
          Length = 178

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
 Frame = +3

Query: 27  AKEDSRNPHPNGGDGRTARTAMKTVSLGAPRSST---VKFRMPTRDNLVPIRVDIEVDGQ 197
           AK D  N   +GG G T R    T+S+    + T   +K  +P R +  PI  +     +
Sbjct: 55  AKMDEWNTRQHGGSGLTQRVRESTISMADAEAQTLAFIKLWVPERSS--PICGNSICQDR 112

Query: 198 RY--------RDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQLAEFRSY 353
           R+         + F +   D  S +   A R A ELK         L  I+  +AE R Y
Sbjct: 113 RFLYRHMPALENYFHYRNLDV-STLKELAARWAPELKFKKGSTHLALDDIRESIAELRFY 171

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>STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 397

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +3

Query: 156 NLVPIRVDIEVDGQRYRDAFTWNPR-----DPDSEVITFAKRTAKELKLPATFV 302
           NL  I   I  D +R+  A+T         DPD  V+ FA    K++ +PA F+
Sbjct: 250 NLAQICGSIASDEKRHETAYTKIVEKLFEIDPDETVLAFADMMKKKIAMPAEFI 303

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>RIBD_CHLMU (Q9PLJ6) Riboflavin biosynthesis protein ribD [Includes:|
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (EC 3.5.4.26) (Riboflavin-specific deaminase);
           5-amino-6-(5-phosphoribosylamino)uracil reductase (EC
           1.1.1.193) (HTP reductase)]
          Length = 371

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +3

Query: 93  KTVSLGAPRSSTVKFRMPTRD--NLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKR 266
           +TV L  PR S    RMP+ D     P+RV ++  G    DA  WNP D  + ++   ++
Sbjct: 200 RTVCLDNPRLSA---RMPSGDLYERQPLRVVVDSRGSVPLDARVWNP-DSGNVLLATTEQ 255

Query: 267 TAKE 278
            +KE
Sbjct: 256 CSKE 259

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>SYQ_RALSO (Q8Y199) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 580

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 288 PATFVPQMLHSIQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDI 452
           P T  P    S++  LA FR     + Q  + ++  +ID+   N ++RD  L+ I
Sbjct: 161 PGTPSPFRDRSVEENLALFRDMRAGKYQDGQHVLRARIDMAAPNIVMRDPVLYRI 215

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>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
 Frame = +2

Query: 161 GADTRRHRGGRPALQGRLHL---EPPRSRLGGH-HLRQEDGQGAQASGHLCPSDAPLHPG 328
           GA  R+    RP  Q +      E P++ +     +      GA A+    P+ A   PG
Sbjct: 346 GASKRKRANPRPIPQTQTQAPAEEAPQTAVWDLLDMNSSQATGAAAAAASAPAAASCAPG 405

Query: 329 AIGRVPFLRGAGDAGQGEDYAP 394
              R P L  +GD   G D  P
Sbjct: 406 VYQREPLLTPSGDPWPGSDPPP 427

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>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
 Frame = +2

Query: 161 GADTRRHRGGRPALQGRLHL---EPPRSRLGGH-HLRQEDGQGAQASGHLCPSDAPLHPG 328
           GA  R+    RP  Q +      E P++ +     +      GA A+    P+ A   PG
Sbjct: 346 GASKRKRANPRPRPQTQTQAPAEEAPQTAVWDLLDMNSSQATGAAAAAASAPAAASCAPG 405

Query: 329 AIGRVPFLRGAGDAGQGEDYAP 394
              R P L  +GD   G D  P
Sbjct: 406 VYQREPLLTPSGDPWPGSDPPP 427

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>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
 Frame = +2

Query: 161 GADTRRHRGGRPALQGRLHL---EPPRSRLGGH-HLRQEDGQGAQASGHLCPSDAPLHPG 328
           GA  R+    RP  Q +      E P++ +     +      GA A+    P+ A   PG
Sbjct: 346 GASKRKRANPRPIPQTQTQAPAEEAPQTAVWDLLDMNSSQATGAAAAAASAPAAASCAPG 405

Query: 329 AIGRVPFLRGAGDAGQGEDYAP 394
              R P L  +GD   G D  P
Sbjct: 406 VYQREPLLTPSGDPWPGSDPPP 427

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>VE4_HPV08 (P06425) Probable protein E4|
          Length = 229

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 29/94 (30%), Positives = 34/94 (36%), Gaps = 3/94 (3%)
 Frame = +2

Query: 137 PHADEGQPGADTRRHR---GGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQASGHLCPS 307
           P A    PG   RR     G  P       L+PP   LG   +    G G Q  GH  P+
Sbjct: 96  PLAPPPYPGPGPRRSPRQFGPGPDRDPEDGLQPP---LGEGQVEGHPGDGDQPQGHPPPT 152

Query: 308 DAPLHPGAIGRVPFLRGAGDAGQGEDYAPQD*PP 409
            +  H G  G        G  G G D+ P   PP
Sbjct: 153 PSNGHKGEEGDGEEEGAVG--GDGNDHPPPPPPP 184

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>PUR7_WOLSU (Q7M9X5) Phosphoribosylaminoimidazole-succinocarboxamide synthase|
           (EC 6.3.2.6) (SAICAR synthetase)
          Length = 236

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
 Frame = +3

Query: 243 EVITFAKRTAKELK--LPATFVPQMLHSIQGQLAEFRSYEGQEMQVKEKIMPLKI---DL 407
           E + F K TA+E+   L + F  + L+ +  +L   +  EG  + + ++I P      D 
Sbjct: 147 EELEFLKETAREINEILRSFFDSKGLNLVDFKLEFGKDIEGNIL-LADEISPDSCRFWDK 205

Query: 408 RVNNTIVRDQFLWDIGNLESDPEEFARTL 494
           + N  + +D+F  D+GN++   EE  R +
Sbjct: 206 KTNEKLDKDRFRQDLGNVKMAYEEVLRRI 234

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>MSHM_SARGL (O63852) Mitochondrial MutS protein homolog|
          Length = 982

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 19/72 (26%), Positives = 30/72 (41%)
 Frame = -3

Query: 344  ELCQLPLDGVEHLRDKGGRKLELLGRPLGEGDDLRVGIAGVPGEGVPVALAVHLDVDAYR 165
            E+C  P D V H++ K   K +L  R L    +L           VPV  + HLD+   +
Sbjct: 906  EICGAPADAVHHIKPKSEHK-KLCNRKLNRRSNL-----------VPVCSSCHLDIHRNK 953

Query: 164  HQVVPRRHAELH 129
              ++  +    H
Sbjct: 954  ISILGWKRTPKH 965

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>CSRA3_PSESM (Q87Z65) Carbon storage regulator homolog 3|
          Length = 62

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 275 LGRPLGEGDDLRVGIAGVPGEGVPVALAVHLDVDAYRHQVVPRRHAEL 132
           +G  +  GD++ V I GV G  V + +    +V  +R ++  R  AEL
Sbjct: 8   VGESINIGDEITVTILGVQGLQVRLGINAPKNVSVHREEIYKRIQAEL 55

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>IER2_HUMAN (Q9BTL4) Immediate early response gene 2 protein (Protein ETR101)|
          Length = 223

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +3

Query: 6   APSTAAQAKEDSRNPHPNGGDGRTARTAMKTVSLGAPRSSTV 131
           A STA  A  D  +P P   D + A TA +T +  APR + V
Sbjct: 77  AESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRPAKV 118

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>ATG2_PICPA (Q9HFR4) Autophagy-related protein 2 (Glucose-induced selective|
            autophagy protein 11) (Pexophagy zeocin-resistant mutant
            protein 7)
          Length = 1862

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 24   QAKEDSRNPHPNGGDGRTARTAMKTVSLGAPRSSTVKFRMPTRDNLV-PIRVDIEVDGQR 200
            + K DS+N HP G         M  +S+G   S +V F   +  +L+ P+ V++  D  R
Sbjct: 988  EIKLDSKNSHPLGNSFLLLLMDMGYISMGMLSSVSVSFETESSASLIAPVNVNVMCDTLR 1047

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>HIS1_HALSA (Q9HN53) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)|
           (ATP-PRT)
          Length = 282

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
 Frame = -3

Query: 302 DKGGRKLELLGRPLGEGDDLRVGIAGVPGEGVPVALAVHLDVDAYRHQVVPRRH-----A 138
           D  G++  +L  P    DD++   A +PG G P  L V        H VVP R      +
Sbjct: 206 DAHGKRYVMLNAPADRLDDVK---AVLPGLGGPTVLDVDEPGTVAVHAVVPERDVFEAIS 262

Query: 137 ELHSGGARGAEAHRLHR 87
           EL + GA G     + R
Sbjct: 263 ELKAVGASGILVTEIER 279

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>DPY7_CAEEL (P34688) Cuticle collagen dpy-7 precursor (Protein dumpy-7)|
          Length = 318

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 33/95 (34%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
 Frame = +2

Query: 137 PHADEGQPGADTRRHRGGRPALQG-RLHLEP---------PRSRLGGHHLRQEDGQGAQA 286
           P    G+PG D    R G+P L G  + L+P         P    G    + E G+  Q 
Sbjct: 105 PPGVSGEPGMDGANGRPGKPGLDGLDVPLDPEPAFPCVICPAGPPGTRGPQGEVGRPGQT 164

Query: 287 --SGHLCPSDAPLHPGAIGRVPFLRGAGDAG-QGE 382
             SGH      P  PG  GRV      GDAG QGE
Sbjct: 165 GESGH---PGLPGRPGKPGRV------GDAGPQGE 190


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,699,971
Number of Sequences: 219361
Number of extensions: 1581026
Number of successful extensions: 6011
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 5549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5981
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result