ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart12e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 605 e-170
2ref|XM_467545.1| Oryza sativa (japonica cultivar-group), mRNA 573 e-160
3dbj|AK073256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 573 e-160
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6emb|CT025155.9| Mouse DNA sequence from clone RP23-228F18 on chr... 44 0.51
7ref|NM_112639.2| Arabidopsis thaliana BSH AT3G17590 (BSH) mRNA, ... 42 2.0
8gb|AY658940.1| Synthetic construct Peudomonas aeruginosa clone F... 42 2.0
9gb|AC012399.40| Mus musculus strain 129S6/SvEvTac clone rp21-184... 42 2.0
10emb|X54201.1|PAGORG Pseudomonas aeruginosa gor gene for glutathi... 42 2.0
11gb|BT024620.1| Arabidopsis thaliana At3g17590 mRNA, complete cds 42 2.0
12gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 ma... 42 2.0
13gb|AE004865.1| Pseudomonas aeruginosa PAO1, section 426 of 529 o... 42 2.0
14gb|AE004629.1| Pseudomonas aeruginosa PAO1, section 190 of 529 o... 42 2.0
15gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ... 42 2.0
16dbj|AK117162.1| Arabidopsis thaliana At3g17590 mRNA for unknown ... 42 2.0
17dbj|AB022219.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.0
18gb|U88061.1|ATU88061 Arabidopsis thaliana SNF5 homolog BSH (bsh)... 42 2.0
19gb|AF051690.1|AF051690 Pseudomonas aeruginosa iron-uptake factor... 42 2.0
20emb|AL929159.4| Mouse DNA sequence from clone RP23-424F12 on chr... 42 2.0
21gb|AC164644.5| Mus musculus BAC clone RP23-276J7 from chromosome... 40 8.0
22gb|BC053232.1| Danio rerio WW domain binding protein 2, mRNA (cD... 40 8.0
23gb|AC127676.4| Mus musculus BAC clone RP24-560M21 from chromosom... 40 8.0
24gb|AC092031.4| Homo sapiens BAC clone RP11-660M7 from 7, complet... 40 8.0
25gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 8.0
26gb|AC015802.21| Homo sapiens chromosome 17, clone RP11-666A8, co... 40 8.0
27dbj|AB225646.1| Aspergillus oryzae cDNA, contig sequence: AoEST2501 40 8.0
28dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 8.0
29dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.0
30ref|NM_199710.1| Danio rerio WW domain binding protein 2 (wbp2),... 40 8.0
31gb|AC011743.9| Homo sapiens BAC clone RP11-299O14 from 2, comple... 40 8.0
32gb|AC146065.4| Pan troglodytes BAC clone clone RP43-60D22 from 7... 40 8.0
33emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chro... 40 8.0
34emb|AL732492.11| Mouse DNA sequence from clone RP23-307C17 on ch... 40 8.0
35gb|AC090699.10| Homo sapiens chromosome 17, clone RP11-794C22, c... 40 8.0 
>dbj|AK105251.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C11, full
            insert sequence
          Length = 1965

 Score =  605 bits (305), Expect = e-170
 Identities = 452/501 (90%)
 Strand = Plus / Plus

                                                                        
Query: 89   gatgaagacggtgagcctcggcgccccgcgctcctccactgtgaagttccgcatgccgac 148
            ||||||||||||||||||||||||| |  |  | ||  |||| |||||||||||||||||
Sbjct: 920  gatgaagacggtgagcctcggcgccgccaggccttcgtctgtcaagttccgcatgccgac 979

                                                                        
Query: 149  gagggacaacctggtgccgatacgcgtcgacatcgaggtggacggccagcgctacaggga 208
            |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 980  gagggataacctggtgccgatacgcgtcgacgtcgaggtggacggccagcgctacaggga 1039

                                                                        
Query: 209  cgccttcacctggaacccccgcgatcccgactcggaggtcatcaccttcgccaagaggac 268
            ||||||||||||||||||  |||| |||||||||||| |||| | |||||| ||||||||
Sbjct: 1040 cgccttcacctggaacccatgcgaccccgactcggagatcataagcttcgcgaagaggac 1099

                                                                        
Query: 269  ggccaaggagctcaagcttccggccacctttgtccctcagatgctccactccatccaggg 328
            ||||||||| |||||||| ||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 1100 ggccaaggacctcaagctgccggccaacttcgtcccccagatgctccactccatccaggg 1159

                                                                        
Query: 329  gcaattggcagagttccgttcctacgaggggcaggagatgcaggtcaaggagaagattat 388
            |||| || | ||||||||||||||||||||  ||||||||||| ||| |||||||||| |
Sbjct: 1160 gcaactgaccgagttccgttcctacgagggagaggagatgcagatcagggagaagattgt 1219

                                                                        
Query: 389  gcccctcaagattgacctccgagtgaacaatacgatagttagagatcagttcttgtggga 448
            |||||||||||||||||||||  | ||||||||  || | ||||||||||||||||||||
Sbjct: 1220 gcccctcaagattgacctccggataaacaatactgtaatcagagatcagttcttgtggga 1279

                                                                        
Query: 449  tataggcaaccttgaaagtgatcctgaggaatttgcgaggacgttatgtgatgatttgaa 508
            |||||||||||| || |||||||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 1280 tataggcaacctggatagtgatcctgaggaatttgcaaggacgctatgtgacgatttgaa 1339

                                                                        
Query: 509  cattacagatcctgaagttgggcctgcaatagctgtttgcatccgtgagcaactttatga 568
            |||||||||||||||||||||||||||||||||||| | |||||| ||||| ||||||||
Sbjct: 1340 cattacagatcctgaagttgggcctgcaatagctgtctccatccgcgagcagctttatga 1399

                                 
Query: 569  gattgctagtcagactgtttc 589
            |||||||||||| | ||||||
Sbjct: 1400 gattgctagtcaaagtgtttc 1420
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>ref|XM_467545.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1103

 Score =  573 bits (289), Expect = e-160
 Identities = 412/453 (90%)
 Strand = Plus / Plus

                                                                       
Query: 137 ccgcatgccgacgagggacaacctggtgccgatacgcgtcgacatcgaggtggacggcca 196
           ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 13  ccgcaggccgacgagggataacctggtgccgatacgcgtcgacgtcgaggtggacggcca 72

                                                                       
Query: 197 gcgctacagggacgccttcacctggaacccccgcgatcccgactcggaggtcatcacctt 256
           ||||||||||||||||||||||||||||||  |||| |||||||||||| |||| | |||
Sbjct: 73  gcgctacagggacgccttcacctggaacccatgcgaccccgactcggagatcataagctt 132

                                                                       
Query: 257 cgccaagaggacggccaaggagctcaagcttccggccacctttgtccctcagatgctcca 316
           ||| ||||||||||||||||| |||||||| ||||||| ||| ||||| |||||||||||
Sbjct: 133 cgcgaagaggacggccaaggacctcaagctgccggccaacttcgtcccccagatgctcca 192

                                                                       
Query: 317 ctccatccaggggcaattggcagagttccgttcctacgaggggcaggagatgcaggtcaa 376
           |||||||||||||||| || | ||||||||||||||||||||  ||||||||||| ||| 
Sbjct: 193 ctccatccaggggcaactgaccgagttccgttcctacgagggagaggagatgcagatcag 252

                                                                       
Query: 377 ggagaagattatgcccctcaagattgacctccgagtgaacaatacgatagttagagatca 436
           |||||||||| ||||||||||||||||||||||  | ||||||||  || | ||||||||
Sbjct: 253 ggagaagattgtgcccctcaagattgacctccggataaacaatactgtaatcagagatca 312

                                                                       
Query: 437 gttcttgtgggatataggcaaccttgaaagtgatcctgaggaatttgcgaggacgttatg 496
           |||||||||||||||||||||||| || |||||||||||||||||||| |||||| ||||
Sbjct: 313 gttcttgtgggatataggcaacctggatagtgatcctgaggaatttgcaaggacgctatg 372

                                                                       
Query: 497 tgatgatttgaacattacagatcctgaagttgggcctgcaatagctgtttgcatccgtga 556
           ||| |||||||||||||||||||||||||||||||||||||||||||| | |||||| ||
Sbjct: 373 tgacgatttgaacattacagatcctgaagttgggcctgcaatagctgtctccatccgcga 432

                                            
Query: 557 gcaactttatgagattgctagtcagactgtttc 589
           ||| |||||||||||||||||||| | ||||||
Sbjct: 433 gcagctttatgagattgctagtcaaagtgtttc 465
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>dbj|AK073256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H11, full
           insert sequence
          Length = 1103

 Score =  573 bits (289), Expect = e-160
 Identities = 412/453 (90%)
 Strand = Plus / Plus

                                                                       
Query: 137 ccgcatgccgacgagggacaacctggtgccgatacgcgtcgacatcgaggtggacggcca 196
           ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 13  ccgcaggccgacgagggataacctggtgccgatacgcgtcgacgtcgaggtggacggcca 72

                                                                       
Query: 197 gcgctacagggacgccttcacctggaacccccgcgatcccgactcggaggtcatcacctt 256
           ||||||||||||||||||||||||||||||  |||| |||||||||||| |||| | |||
Sbjct: 73  gcgctacagggacgccttcacctggaacccatgcgaccccgactcggagatcataagctt 132

                                                                       
Query: 257 cgccaagaggacggccaaggagctcaagcttccggccacctttgtccctcagatgctcca 316
           ||| ||||||||||||||||| |||||||| ||||||| ||| ||||| |||||||||||
Sbjct: 133 cgcgaagaggacggccaaggacctcaagctgccggccaacttcgtcccccagatgctcca 192

                                                                       
Query: 317 ctccatccaggggcaattggcagagttccgttcctacgaggggcaggagatgcaggtcaa 376
           |||||||||||||||| || | ||||||||||||||||||||  ||||||||||| ||| 
Sbjct: 193 ctccatccaggggcaactgaccgagttccgttcctacgagggagaggagatgcagatcag 252

                                                                       
Query: 377 ggagaagattatgcccctcaagattgacctccgagtgaacaatacgatagttagagatca 436
           |||||||||| ||||||||||||||||||||||  | ||||||||  || | ||||||||
Sbjct: 253 ggagaagattgtgcccctcaagattgacctccggataaacaatactgtaatcagagatca 312

                                                                       
Query: 437 gttcttgtgggatataggcaaccttgaaagtgatcctgaggaatttgcgaggacgttatg 496
           |||||||||||||||||||||||| || |||||||||||||||||||| |||||| ||||
Sbjct: 313 gttcttgtgggatataggcaacctggatagtgatcctgaggaatttgcaaggacgctatg 372

                                                                       
Query: 497 tgatgatttgaacattacagatcctgaagttgggcctgcaatagctgtttgcatccgtga 556
           ||| |||||||||||||||||||||||||||||||||||||||||||| | |||||| ||
Sbjct: 373 tgacgatttgaacattacagatcctgaagttgggcctgcaatagctgtctccatccgcga 432

                                            
Query: 557 gcaactttatgagattgctagtcagactgtttc 589
           ||| |||||||||||||||||||| | ||||||
Sbjct: 433 gcagctttatgagattgctagtcaaagtgtttc 465
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  155 bits (78), Expect = 2e-34
 Identities = 87/90 (96%)
 Strand = Plus / Plus

                                                                            
Query: 137      ccgcatgccgacgagggacaacctggtgccgatacgcgtcgacatcgaggtggacggcca 196
                ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 30090670 ccgcaggccgacgagggataacctggtgccgatacgcgtcgacgtcgaggtggacggcca 30090729

                                              
Query: 197      gcgctacagggacgccttcacctggaaccc 226
                ||||||||||||||||||||||||||||||
Sbjct: 30090730 gcgctacagggacgccttcacctggaaccc 30090759



 Score =  129 bits (65), Expect = 1e-26
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                            
Query: 446      ggatataggcaaccttgaaagtgatcctgaggaatttgcgaggacgttatgtgatgattt 505
                ||||||||||||||| || |||||||||||||||||||| |||||| ||||||| |||||
Sbjct: 30091383 ggatataggcaacctggatagtgatcctgaggaatttgcaaggacgctatgtgacgattt 30091442

                                         
Query: 506      gaacattacagatcctgaagttggg 530
                |||||||||||||||||||||||||
Sbjct: 30091443 gaacattacagatcctgaagttggg 30091467



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                            
Query: 234      cccgactcggaggtcatcaccttcgccaagaggacggccaaggagctcaagcttccggcc 293
                |||||||||||| |||| | |||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 30090864 cccgactcggagatcataagcttcgcgaagaggacggccaaggacctcaagctgccggcc 30090923

                                                  
Query: 294      acctttgtccctcagatgctccactccatccagg 327
                | ||| ||||| ||||||||||||||||||||||
Sbjct: 30090924 aacttcgtcccccagatgctccactccatccagg 30090957



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 324      caggggcaattggcagagttccgttcctacgaggggcaggagatgcaggtcaaggagaag 383
                ||||||||| || | ||||||||||||||||||||  ||||||||||| ||| |||||||
Sbjct: 30091057 caggggcaactgaccgagttccgttcctacgagggagaggagatgcagatcagggagaag 30091116

                               
Query: 384      attatgcccctcaag 398
                ||| |||||||||||
Sbjct: 30091117 attgtgcccctcaag 30091131



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 89       gatgaagacggtgagcctcggcgcc 113
                |||||||||||||||||||||||||
Sbjct: 30090526 gatgaagacggtgagcctcggcgcc 30090550



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 530      gcctgcaatagctgtttgcatccgtgagcaactttatgag 569
                ||||||||||||||| | |||||| ||||| |||||||||
Sbjct: 30092051 gcctgcaatagctgtctccatccgcgagcagctttatgag 30092090



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                   
Query: 397      agattgacctccgagtgaacaatacgatagttagagatcagttcttgtggg 447
                |||||||||||||  | ||||||||  || | |||||||||||||||||||
Sbjct: 30091213 agattgacctccggataaacaatactgtaatcagagatcagttcttgtggg 30091263
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>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0685G12
          Length = 149155

 Score =  155 bits (78), Expect = 2e-34
 Identities = 87/90 (96%)
 Strand = Plus / Plus

                                                                         
Query: 137   ccgcatgccgacgagggacaacctggtgccgatacgcgtcgacatcgaggtggacggcca 196
             ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 70267 ccgcaggccgacgagggataacctggtgccgatacgcgtcgacgtcgaggtggacggcca 70326

                                           
Query: 197   gcgctacagggacgccttcacctggaaccc 226
             ||||||||||||||||||||||||||||||
Sbjct: 70327 gcgctacagggacgccttcacctggaaccc 70356



 Score =  129 bits (65), Expect = 1e-26
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                         
Query: 446   ggatataggcaaccttgaaagtgatcctgaggaatttgcgaggacgttatgtgatgattt 505
             ||||||||||||||| || |||||||||||||||||||| |||||| ||||||| |||||
Sbjct: 70980 ggatataggcaacctggatagtgatcctgaggaatttgcaaggacgctatgtgacgattt 71039

                                      
Query: 506   gaacattacagatcctgaagttggg 530
             |||||||||||||||||||||||||
Sbjct: 71040 gaacattacagatcctgaagttggg 71064



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                         
Query: 234   cccgactcggaggtcatcaccttcgccaagaggacggccaaggagctcaagcttccggcc 293
             |||||||||||| |||| | |||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 70461 cccgactcggagatcataagcttcgcgaagaggacggccaaggacctcaagctgccggcc 70520

                                               
Query: 294   acctttgtccctcagatgctccactccatccagg 327
             | ||| ||||| ||||||||||||||||||||||
Sbjct: 70521 aacttcgtcccccagatgctccactccatccagg 70554



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                         
Query: 324   caggggcaattggcagagttccgttcctacgaggggcaggagatgcaggtcaaggagaag 383
             ||||||||| || | ||||||||||||||||||||  ||||||||||| ||| |||||||
Sbjct: 70654 caggggcaactgaccgagttccgttcctacgagggagaggagatgcagatcagggagaag 70713

                            
Query: 384   attatgcccctcaag 398
             ||| |||||||||||
Sbjct: 70714 attgtgcccctcaag 70728



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 89    gatgaagacggtgagcctcggcgcc 113
             |||||||||||||||||||||||||
Sbjct: 70123 gatgaagacggtgagcctcggcgcc 70147



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 530   gcctgcaatagctgtttgcatccgtgagcaactttatgag 569
             ||||||||||||||| | |||||| ||||| |||||||||
Sbjct: 71648 gcctgcaatagctgtctccatccgcgagcagctttatgag 71687



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 397   agattgacctccgagtgaacaatacgatagttagagatcagttcttgtggg 447
             |||||||||||||  | ||||||||  || | |||||||||||||||||||
Sbjct: 70810 agattgacctccggataaacaatactgtaatcagagatcagttcttgtggg 70860
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>emb|CT025155.9| Mouse DNA sequence from clone RP23-228F18 on chromosome 16, complete
              sequence
          Length = 203093

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 492    ttatgtgatgatttgaacatta 513
              ||||||||||||||||||||||
Sbjct: 186263 ttatgtgatgatttgaacatta 186242
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>ref|NM_112639.2| Arabidopsis thaliana BSH AT3G17590 (BSH) mRNA, complete cds
          Length = 900

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 460 ttgaaagtgatcctgaggaatttgc 484
           |||| ||||||||||||||||||||
Sbjct: 442 ttgagagtgatcctgaggaatttgc 466
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>gb|AY658940.1| Synthetic construct Peudomonas aeruginosa clone FLH046880.01F
           PA4512 gene, partial cds
          Length = 900

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 179 catcgaggtggacggccagcgctac 203
           |||||||||||||||| ||||||||
Sbjct: 534 catcgaggtggacggcgagcgctac 558
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>gb|AC012399.40| Mus musculus strain 129S6/SvEvTac clone rp21-184c17 map 16, complete
             sequence
          Length = 146040

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 290   ggccacctttgtccctcagatgctc 314
             |||||||||||||||||||| ||||
Sbjct: 72176 ggccacctttgtccctcagaggctc 72152
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>emb|X54201.1|PAGORG Pseudomonas aeruginosa gor gene for glutathione reductase and ORF1
           for hypothetical protein, strain PAO8
          Length = 1803

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 181 tcgaggtggacggccagcgct 201
           |||||||||||||||||||||
Sbjct: 594 tcgaggtggacggccagcgct 614
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>gb|BT024620.1| Arabidopsis thaliana At3g17590 mRNA, complete cds
          Length = 723

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 460 ttgaaagtgatcctgaggaatttgc 484
           |||| ||||||||||||||||||||
Sbjct: 368 ttgagagtgatcctgaggaatttgc 392
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>gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 map 16, complete sequence
          Length = 195335

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 290    ggccacctttgtccctcagatgctc 314
              |||||||||||||||||||| ||||
Sbjct: 180043 ggccacctttgtccctcagaggctc 180067
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>gb|AE004865.1| Pseudomonas aeruginosa PAO1, section 426 of 529 of the complete
           genome
          Length = 10413

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 179 catcgaggtggacggccagcgctac 203
           |||||||||||||||| ||||||||
Sbjct: 629 catcgaggtggacggcgagcgctac 653
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>gb|AE004629.1| Pseudomonas aeruginosa PAO1, section 190 of 529 of the complete
            genome
          Length = 10541

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 181  tcgaggtggacggccagcgct 201
            |||||||||||||||||||||
Sbjct: 1052 tcgaggtggacggccagcgct 1072
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>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 290    ggccacctttgtccctcagatgctc 314
              |||||||||||||||||||| ||||
Sbjct: 111431 ggccacctttgtccctcagaggctc 111407
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>dbj|AK117162.1| Arabidopsis thaliana At3g17590 mRNA for unknown protein, complete
           cds, clone: RAFL16-70-I07
          Length = 898

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 460 ttgaaagtgatcctgaggaatttgc 484
           |||| ||||||||||||||||||||
Sbjct: 443 ttgagagtgatcctgaggaatttgc 467
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>dbj|AB022219.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MKP6
          Length = 83233

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 460   ttgaaagtgatcctgaggaatttgc 484
             |||| ||||||||||||||||||||
Sbjct: 39461 ttgagagtgatcctgaggaatttgc 39437
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>gb|U88061.1|ATU88061 Arabidopsis thaliana SNF5 homolog BSH (bsh) mRNA, complete cds
          Length = 876

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 460 ttgaaagtgatcctgaggaatttgc 484
           |||| ||||||||||||||||||||
Sbjct: 404 ttgagagtgatcctgaggaatttgc 428
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>gb|AF051690.1|AF051690 Pseudomonas aeruginosa iron-uptake factor (piuC), hydroxamate-type
            ferrisiderophore receptor (piuA), and iron-uptake factor
            (piuB) genes, complete cds
          Length = 7701

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 179  catcgaggtggacggccagcgctac 203
            |||||||||||||||| ||||||||
Sbjct: 7687 catcgaggtggacggcgagcgctac 7663
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>emb|AL929159.4| Mouse DNA sequence from clone RP23-424F12 on chromosome 2, complete
             sequence
          Length = 98465

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 359   gcaggagatgcaggtcaagga 379
             |||||||||||||||||||||
Sbjct: 89215 gcaggagatgcaggtcaagga 89235
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>gb|AC164644.5| Mus musculus BAC clone RP23-276J7 from chromosome 5, complete sequence
          Length = 171252

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    aacattacagatcctgaagt 526
              ||||||||||||||||||||
Sbjct: 140363 aacattacagatcctgaagt 140344
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>gb|BC053232.1| Danio rerio WW domain binding protein 2, mRNA (cDNA clone MGC:64061
           IMAGE:6794142), complete cds
          Length = 1205

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 41  ccgaaacccccacccgaacggcgg 64
           |||||||| |||||||||||||||
Sbjct: 120 ccgaaaccaccacccgaacggcgg 143
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>gb|AC127676.4| Mus musculus BAC clone RP24-560M21 from chromosome 5, complete sequence
          Length = 146575

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   aacattacagatcctgaagt 526
             ||||||||||||||||||||
Sbjct: 33125 aacattacagatcctgaagt 33106
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>gb|AC092031.4| Homo sapiens BAC clone RP11-660M7 from 7, complete sequence
          Length = 99374

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 464   aagtgatcctgaggaatttgcgag 487
             |||||||||||||| |||||||||
Sbjct: 45121 aagtgatcctgaggcatttgcgag 45144
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     tcgacatcgaggtggacggc 194
               ||||||||||||||||||||
Sbjct: 2878415 tcgacatcgaggtggacggc 2878434
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>gb|AC015802.21| Homo sapiens chromosome 17, clone RP11-666A8, complete sequence
          Length = 205753

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 527    tgggcctgcaatagctgttt 546
              ||||||||||||||||||||
Sbjct: 201641 tgggcctgcaatagctgttt 201660
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>dbj|AB225646.1| Aspergillus oryzae cDNA, contig sequence: AoEST2501
          Length = 949

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 73  ggaccgcccggacggcgatgaagacggt 100
           |||| |||| ||||||||||||||||||
Sbjct: 811 ggactgccccgacggcgatgaagacggt 784
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 73     ggaccgcccggacggcgatgaagacggt 100
              |||| |||| ||||||||||||||||||
Sbjct: 274103 ggactgccccgacggcgatgaagacggt 274076
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 85      cggcgatgaagacggtgagc 104
               ||||||||||||||||||||
Sbjct: 2054977 cggcgatgaagacggtgagc 2054958
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>ref|NM_199710.1| Danio rerio WW domain binding protein 2 (wbp2), mRNA
          Length = 1205

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 41  ccgaaacccccacccgaacggcgg 64
           |||||||| |||||||||||||||
Sbjct: 120 ccgaaaccaccacccgaacggcgg 143
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>gb|AC011743.9| Homo sapiens BAC clone RP11-299O14 from 2, complete sequence
          Length = 114495

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 433  atcagttcttgtgggatata 452
            ||||||||||||||||||||
Sbjct: 4750 atcagttcttgtgggatata 4769
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>gb|AC146065.4| Pan troglodytes BAC clone clone RP43-60D22 from 7, complete sequence
          Length = 172757

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 464   aagtgatcctgaggaatttgcgag 487
             |||||||||||||| |||||||||
Sbjct: 62758 aagtgatcctgaggcatttgcgag 62735
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>emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chromosome 2, complete
             sequence
          Length = 188624

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   atgctccactccatccaggg 328
             ||||||||||||||||||||
Sbjct: 90599 atgctccactccatccaggg 90618
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>emb|AL732492.11| Mouse DNA sequence from clone RP23-307C17 on chromosome 4, complete
             sequence
          Length = 166942

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   aggcaaccttgaaagtgatc 471
             ||||||||||||||||||||
Sbjct: 90852 aggcaaccttgaaagtgatc 90871
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>gb|AC090699.10| Homo sapiens chromosome 17, clone RP11-794C22, complete sequence
          Length = 138379

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 527    tgggcctgcaatagctgttt 546
              ||||||||||||||||||||
Sbjct: 129785 tgggcctgcaatagctgttt 129766


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,803,607
Number of Sequences: 3902068
Number of extensions: 3803607
Number of successful extensions: 72417
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72187
Number of HSP's gapped (non-prelim): 230
length of query: 589
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 566
effective length of database: 17,143,297,704
effective search space: 9703106500464
effective search space used: 9703106500464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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