ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart12e01 |
|---|---|
| Clone Library Name | barley_pub |
>AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) (Rap1-GTP-interacting adapter molecule) (RIAM) (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich protein 73) (Retinoic ac Length = 666 Score = 38.1 bits (87), Expect = 0.017 Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = +2 Query: 170 DEFREPPRLPPHHLDDFRDPARLPPGHPDSLREHP---PPPRHHFAGHGGGTLPP 325 D+F PP PP LDD LPP PD + P PPP +AG G LPP Sbjct: 551 DDFLPPPP-PPPPLDD----PELPPPPPDFMEPPPDFVPPPPPSYAGIAGSELPP 600
>CAPU_DROME (Q24120) Protein cappuccino| Length = 1059 Score = 37.0 bits (84), Expect = 0.037 Identities = 22/54 (40%), Positives = 26/54 (48%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASHMAAA 346 PP PP L ++ P PP P S PPPP G GGG PP M+A+ Sbjct: 506 PPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEG-GGGIPPPPPPMSAS 558
>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 646 Score = 36.6 bits (83), Expect = 0.049 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Frame = +2 Query: 167 LDEFREPPRLP-----PHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPP 325 +++F PP+ P P +DD P PP D + PPP F HGG +LPP Sbjct: 506 VNKFPPPPKFPQSSFPPPPMDDLPPPPP-PPEIADLPPDFLPPPPPSFVSHGGESLPP 562 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 13/60 (21%) Frame = +2 Query: 185 PPRLPPHHLD---DFRDPA----------RLPPGHPDSLREHPPPPRHHFAGHGGGTLPP 325 PP PP D DF P LPP PD + PPPP F GG PP Sbjct: 530 PPPPPPEIADLPPDFLPPPPPSFVSHGGESLPPPPPDPVASLPPPP-PAFTSAGGAPPPP 588
>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)| Length = 4684 Score = 35.0 bits (79), Expect = 0.14 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Frame = +2 Query: 326 ASHMAAALEE--RIGAEIEEAHALLGQNQRLSATHVALVQEVSAVRHELGHTARAIGAAQ 499 A AALEE R+ A++EEA +L + ++ SA + L QE + R + A A Q Sbjct: 2138 ARQRKAALEEVERLKAKVEEARSLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ 2197 Query: 500 QEGDLR 517 +E +L+ Sbjct: 2198 KEQELQ 2203
>AMOL2_HUMAN (Q9Y2J4) Angiomotin-like protein 2 (Leman coiled-coil protein)| (LCCP) Length = 779 Score = 34.7 bits (78), Expect = 0.18 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 6/101 (5%) Frame = +2 Query: 263 REHPPPPRHHFAGHG--GGTLPPASH---MAAALEERIG-AEIEEAHALLGQNQRLSATH 424 +EHPPPP GHG PPA A A G A + + A+L +N RL + Sbjct: 269 QEHPPPPHPAALGHGPLSSLSPPAVEGPVSAQASSATSGSAHLAQMEAVLRENARLQRDN 328 Query: 425 VALVQEVSAVRHELGHTARAIGAAQQEGDLRIREVYERLMK 547 L +E+ + + G + Q R+ E +E L + Sbjct: 329 ERLQRELESSAEKAGRIEKLESEIQ-----RLSEAHESLTR 364
>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)| Length = 1002 Score = 33.5 bits (75), Expect = 0.41 Identities = 24/66 (36%), Positives = 26/66 (39%) Frame = +2 Query: 173 EFREPPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASHMAAALE 352 E PP P HH P PP H + PPPP HH G +PP LE Sbjct: 296 EHMPPP--PMHHEPGEHMPP--PPMHHEPGEHMPPPPMHH---EPGEHMPPPPFKHHELE 348 Query: 353 ERIGAE 370 E G E Sbjct: 349 EHEGPE 354 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/46 (39%), Positives = 20/46 (43%) Frame = +2 Query: 197 PPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASH 334 P HH +F D R P H + PPPP HH G PP H Sbjct: 185 PKHH--EFDDEDREFPAHHEPGEHMPPPPMHHKPGE--HMPPPPMH 226 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/54 (37%), Positives = 21/54 (38%) Frame = +2 Query: 173 EFREPPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASH 334 E PP P HH P PP H + PPPP HH G PP H Sbjct: 270 EHMPPP--PMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGE--HMPPPPMH 317 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/54 (37%), Positives = 21/54 (38%) Frame = +2 Query: 173 EFREPPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASH 334 E PP P HH P PP H + PPPP HH G PP H Sbjct: 244 EHMPPP--PMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGE--HMPPPPMH 291 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/54 (37%), Positives = 21/54 (38%) Frame = +2 Query: 173 EFREPPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASH 334 E PP P HH P PP H + PPPP HH G PP H Sbjct: 218 EHMPPP--PMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGE--HMPPPPMH 265
>NEDD4_HUMAN (P46934) E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-)| Length = 1000 Score = 33.5 bits (75), Expect = 0.41 Identities = 16/32 (50%), Positives = 16/32 (50%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREHPPP 280 P R PPH L R P R PP P S R P P Sbjct: 9 PTRAPPHALPTPRAPPRAPPPSPRSARRRPFP 40
>PLEC1_CRIGR (Q9JI55) Plectin-1 (PLTN) (PCN) (300-kDa intermediate| filament-associated protein) (IFAP300) (Fragment) Length = 4473 Score = 33.1 bits (74), Expect = 0.54 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Frame = +2 Query: 326 ASHMAAALEE--RIGAEIEEAHALLGQNQRLSATHVALVQEVSAVRHELGHTARAIGAAQ 499 A AALEE R+ A++EEA L + ++ SA + L QE + R + A A Q Sbjct: 1927 ARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFVVQQ 1986 Query: 500 QEGDLR 517 +E +L+ Sbjct: 1987 REEELQ 1992
>ATPA_MYCLE (P45825) ATP synthase alpha chain (EC 3.6.3.14) (ATP synthase F1| sector alpha subunit) Length = 558 Score = 32.7 bits (73), Expect = 0.70 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 209 LDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASHMAAALEERIGAEIEEAH 385 L + R+ +L DSL E + FA GG ++ P H+AA EE++ E + H Sbjct: 483 LTEIRESQKLTDEAADSLTEVIKSFKKGFAATGGASVVPNEHVAALDEEKLDKESVKVH 541
>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) Length = 1147 Score = 32.3 bits (72), Expect = 0.92 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = +2 Query: 179 REPPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASHM 337 + PP +PP HL F P P P + PPP G GG +PP M Sbjct: 860 QRPPGMPPPHLQRF--PLMPPRPMPPHMMHRGPPP-----GPGGFAMPPPHGM 905
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 32.3 bits (72), Expect = 0.92 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = +2 Query: 179 REPPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASHM 337 + PP +PP HL F P P P + PPP G GG +PP M Sbjct: 753 QRPPGMPPPHLQRF--PMMPPRPMPPHMMHRGPPP-----GPGGFAMPPPHGM 798
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 32.3 bits (72), Expect = 0.92 Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREHPP--PPRHHFAGHGGGTLPPASH 334 PPR PPH P PP H HPP PP H HG PP H Sbjct: 359 PPRHPPHGPPPHGHPPHGPPPH-----GHPPHGPPPHGHPPHGP---PPHGH 402
>VP40_SHV21 (Q01002) Capsid protein P40 [Contains: Capsid protein VP24| (Assemblin) (Protease) (EC 3.4.21.97); Capsid protein VP22A; C-terminal peptide] Length = 475 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Frame = +2 Query: 182 EPPRLPPHHLDDFRDPARLPPGHPDSLREHP---PPPRHH 292 +P R PPHH F +P L PGH R P P P H Sbjct: 375 QPNRYPPHH---FSNPYSLDPGHASYFRYAPYGAPKPDQH 411
>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 637 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Frame = +2 Query: 179 REPPRLPPHHLDDFRDPARLPPGHPDSLREHP---PPPRHHFAGHGGGTLPPASHM--AA 343 ++P +PPH + PA +PP P + R P P P T PP H+ AA Sbjct: 26 QKPAYVPPHLRNRAAPPAAVPPAAPAAYRPSPTGLPTP---------ATTPPTRHIVPAA 76 Query: 344 ALEERIG 364 E+ +G Sbjct: 77 VAEDDVG 83
>ZDH19_MOUSE (Q810M5) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 19) (DHHC-19) Length = 347 Score = 31.6 bits (70), Expect = 1.6 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +2 Query: 239 PPGHPDSLREHPPPPRHHFAGHGGGTLPPASHMAAALEE--RIGAEIEEA 382 PP P R PP P+H G PP S AAAL+E R+ A +E++ Sbjct: 283 PPRRPKHCRPGPPGPQHQ-PRRVPGKGPPGSGEAAALQEMRRLPASVEKS 331
>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6| Length = 545 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = +2 Query: 170 DEFREP--PRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPP 325 D F P P PP H + P RLP G P L PPP G G PP Sbjct: 215 DRFPGPVGPGGPPPHFPGMQGPPRLPSGPPGPLGPPGPPP------PGQGLPPP 262
>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)| Length = 4687 Score = 31.6 bits (70), Expect = 1.6 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Frame = +2 Query: 326 ASHMAAALEE--RIGAEIEEAHALLGQNQRLSATHVALVQEVSAVRHELGHTARAIGAAQ 499 A ALEE R+ A++EEA L + ++ SA + L QE + R + A A Q Sbjct: 2141 ARQRKVALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFVVQQ 2200 Query: 500 QEGDLR 517 +E +L+ Sbjct: 2201 REEELQ 2206
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 31.2 bits (69), Expect = 2.0 Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Frame = +2 Query: 221 RDPARLPPGHPDSLRE--HPPPPRHHFAGHGGGTLPPASHMAAALEERIGAEIEEAHALL 394 RDP PPG P+ P PPR G G G L P A + A L Sbjct: 717 RDPTPRPPGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAE-LR 775 Query: 395 GQNQRLSATHVAL 433 G+ + L VAL Sbjct: 776 GKTRSLGRAEVAL 788
>BRC4_DROME (Q24206) Broad-complex core-protein isoform 6| Length = 880 Score = 31.2 bits (69), Expect = 2.0 Identities = 27/72 (37%), Positives = 28/72 (38%), Gaps = 2/72 (2%) Frame = +2 Query: 179 REPPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRH--HFAGHGGGTLPPASHMAAALE 352 RE R LD RD R PG S PPPP H HF H LP + A Sbjct: 559 RERERERERSLDHERDLER--PGGTGS--PPPPPPSHHSHFGQHPLSLLPSHHQLHATHH 614 Query: 353 ERIGAEIEEAHA 388 E A AHA Sbjct: 615 ELSAAAAHHAHA 626
>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) Length = 497 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPP 325 PP PPH DF P PP P ++P PP GG PP Sbjct: 350 PPSFPPH--PDFAAP---PPPPPPPAADYPMPPPPLSQPSGGAPPPP 391
>CPSF7_RAT (Q5XI29) Cleavage and polyadenylation specificity factor 7| Length = 462 Score = 30.8 bits (68), Expect = 2.7 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREH--PPPPR--HHFAGHGGGTLPPASHMAAA 346 PP +PP +PP P +H PPPPR H A G +PPA H+ A Sbjct: 230 PPPIPPP--PPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPA 285
>CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity factor 7| Length = 471 Score = 30.8 bits (68), Expect = 2.7 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREH--PPPPR--HHFAGHGGGTLPPASHMAAA 346 PP +PP +PP P +H PPPPR H A G +PPA H+ A Sbjct: 239 PPPIPPP--PPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPA 294
>CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity factor 7| (Cleavage and polyadenylation specificity factor 59 kDa subunit) (CPSF 59 kDa subunit) (Pre-mRNA cleavage factor Im 59-kDa subunit) Length = 471 Score = 30.8 bits (68), Expect = 2.7 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREH--PPPPR--HHFAGHGGGTLPPASHMAAA 346 PP +PP +PP P +H PPPPR H A G +PPA H+ A Sbjct: 239 PPPIPPP--PPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPA 294
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic| chromosome-associated protein) (MCAP) Length = 1400 Score = 30.8 bits (68), Expect = 2.7 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHH 292 PP P H + P P P + +H P PRHH Sbjct: 1017 PPGQQPTHPPPGQQPPPPQPAKPQQVIQHHPSPRHH 1052
>TMPS2_MOUSE (Q9JIQ8) Transmembrane protease, serine 2 (EC 3.4.21.-)| (Epitheliasin) (Plasmic transmembrane protein X) [Contains: Transmembrane protease, serine 2 non-catalytic chain; Transmembrane protease, serine 2 catalytic chain] Length = 490 Score = 30.8 bits (68), Expect = 2.7 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -2 Query: 495 AAPMARAVWPSSCRTAETSC-TSATCVAESRW 403 AA + W S+C T+E C +S TC++ S W Sbjct: 100 AAVLLWRFWDSNCSTSEMECGSSGTCISSSLW 131
>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB| Length = 142 Score = 30.8 bits (68), Expect = 2.7 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -2 Query: 525 SRIRRSPSCWAAPMARAVWPSSCRTAETSCTSATC 421 SR RS SCW +P P + R TS +A+C Sbjct: 101 SRSSRSCSCWRSPCGSRCAPPAPRATATSAVTASC 135
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 30.4 bits (67), Expect = 3.5 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHG---GGTLPPASH 334 PP +PP P LPPG P ++ P PP AGHG GT P A H Sbjct: 244 PPPVPP--------PGALPPGIPPAMPPPPMPP--GAAGHGPPSAGT-PGAGH 285
>VE4_HPV05 (P06924) Probable protein E4| Length = 245 Score = 30.4 bits (67), Expect = 3.5 Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 6/58 (10%) Frame = +2 Query: 179 REPPRLPPHHLDDFRDPARLPP------GHPDSLREHPPPPRHHFAGHGGGTLPPASH 334 R PRL P D + PP GHP + HPPPP PPA H Sbjct: 111 RRSPRLGPLQADRDPEEGPQPPAEGEVEGHPGGDQGHPPPP------------PPAPH 156
>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)| Length = 640 Score = 30.4 bits (67), Expect = 3.5 Identities = 16/34 (47%), Positives = 17/34 (50%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPR 286 PP LPP P RLPP P + PPPPR Sbjct: 441 PPGLPPGP-PPRGPPPRLPPPAPPGMPPPPPPPR 473
>TM55B_RAT (Q5PPM8) Transmembrane protein 55B (EC 3.1.3.-) (Type I| phosphatidylinositol 4,5-bisphosphate 4-phosphatase) (PtdIns-4,5-P2 4-Ptase I) Length = 284 Score = 30.4 bits (67), Expect = 3.5 Identities = 24/91 (26%), Positives = 27/91 (29%), Gaps = 3/91 (3%) Frame = +2 Query: 59 AGRHRNPLPSSFSRGAGGGNXXXXXXXXXXXXXXXXLDEFREPPRLPPHHLDDFRDPARL 238 A R+PL S G GGN P PP+ P Sbjct: 3 ADGERSPLLSEAGDGGAGGNGLAGPGGSATGPGGGLT------PSAPPYGAGKHAPPQAF 56 Query: 239 PP---GHPDSLREHPPPPRHHFAGHGGGTLP 322 PP GHP L PPP G+ P Sbjct: 57 PPFPEGHPAVLPGEDPPPYSPLTSPDSGSAP 87
>TM55B_MOUSE (Q3TWL2) Transmembrane protein 55B (EC 3.1.3.-) (Type I| phosphatidylinositol 4,5-bisphosphate 4-phosphatase) (PtdIns-4,5-P2 4-Ptase I) Length = 284 Score = 30.4 bits (67), Expect = 3.5 Identities = 24/91 (26%), Positives = 27/91 (29%), Gaps = 3/91 (3%) Frame = +2 Query: 59 AGRHRNPLPSSFSRGAGGGNXXXXXXXXXXXXXXXXLDEFREPPRLPPHHLDDFRDPARL 238 A R+PL S G GGN P PP+ P Sbjct: 3 ADGERSPLLSEAGDGGAGGNGLAGPGGSATGPGGGLT------PSAPPYGAGKHAPPQAF 56 Query: 239 PP---GHPDSLREHPPPPRHHFAGHGGGTLP 322 PP GHP L PPP G+ P Sbjct: 57 PPFPEGHPAVLPGEDPPPYSPLTSPDSGSAP 87
>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)| Length = 427 Score = 30.0 bits (66), Expect = 4.5 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +2 Query: 176 FREPPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHH 292 ++ PP P HH PP HP L + PPPP H+ Sbjct: 398 YKSPPPPPVHHYS--------PPHHP-YLYKSPPPPYHY 427
>EXTN1_ARATH (Q38913) Extensin-1 precursor (AtExt1) (AtExt4)| Length = 373 Score = 30.0 bits (66), Expect = 4.5 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +2 Query: 176 FREPPRLPPHHLDDFRDPARLPPGH--PDSLREHPPPPRHHFA 298 + PP PP +++ P PP H P ++ PPPP HH++ Sbjct: 319 YHSPP--PPKKHYEYKSPP--PPVHYSPPTVYHSPPPPVHHYS 357
>CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell surface| antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Erythrocyte receptor) (Rosette receptor) Length = 351 Score = 30.0 bits (66), Expect = 4.5 Identities = 13/30 (43%), Positives = 13/30 (43%) Frame = +2 Query: 239 PPGHPDSLREHPPPPRHHFAGHGGGTLPPA 328 PPGH H PPP H H PPA Sbjct: 285 PPGHRSQAPSHRPPPPGHRVQHQPQKRPPA 314
>UL60_HCMVA (P16817) Hypothetical protein UL60| Length = 160 Score = 30.0 bits (66), Expect = 4.5 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%) Frame = -2 Query: 114 PPPAPREKE--EGSGLRWRPAMRS 49 PPP P EK EG GLRW P +S Sbjct: 101 PPPVPEEKGGGEGGGLRWFPFRQS 124
>PYGO2_HUMAN (Q9BRQ0) Pygopus homolog 2| Length = 406 Score = 30.0 bits (66), Expect = 4.5 Identities = 30/114 (26%), Positives = 40/114 (35%), Gaps = 7/114 (6%) Frame = +2 Query: 17 PFNHPSVGFRRLRMAGRHRNPLPSSFSRGAGGGNXXXXXXXXXXXXXXXXLDEFREPPRL 196 PF V F R+ G +P +S G GGG R+PP Sbjct: 93 PFLGSPVPFGGFRVQGGMAGQVPPGYSTGGGGGPQPLR----------------RQPPPF 136 Query: 197 PPHHLDDFRDPA-RLPPGHPDSLREHPPPPRHHFAGH------GGGTLPPASHM 337 PP+ + PA +PP P +PPP +F G PP+ M Sbjct: 137 PPNPM----GPAFNMPPQGPG----YPPPGNMNFPSQPFNQPLGQNFSPPSGQM 182
>GAGHB_DROME (Q967S7) Retrovirus-related Gag polyprotein from transposon| HMS-Beagle Length = 467 Score = 30.0 bits (66), Expect = 4.5 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = +2 Query: 179 REPPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPP 325 R+PP +PP H P R PP + L + P PR H + G P Sbjct: 305 RQPPPVPPRH------PMRRPPQY---LGQPFPAPRQHVSNFGNAPFIP 344
>SALM_DROME (P39770) Homeotic protein spalt-major| Length = 1365 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/66 (37%), Positives = 25/66 (37%), Gaps = 5/66 (7%) Frame = +2 Query: 176 FREPPRLPPHHLDDFRDPA--RLPPGHPDSLREHPPPPRHHFAGHGGGTLP---PASHMA 340 F L P H R PA LPPG P PPP HH H P P H Sbjct: 732 FTTAKMLSPEHHSPVRSPAGGALPPGVP-------PPPHHH--PHHMARSPFFNPIKHEM 782 Query: 341 AALEER 358 AAL R Sbjct: 783 AALLPR 788
>FBLI1_MOUSE (Q71FD7) Filamin-binding LIM protein 1 (CSX-associated LIM)| Length = 375 Score = 29.6 bits (65), Expect = 5.9 Identities = 19/58 (32%), Positives = 21/58 (36%) Frame = +2 Query: 182 EPPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASHMAAALEE 355 EPP LP L + LPP PPPP G PP H + EE Sbjct: 115 EPPVLPGKSLISDLEQLHLPPP--------PPPPPPQAPSKGSSVHPPPGHARPSEEE 164
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 242 PGHPDSLREHPPPPRHHFAGHGGGTLPP 325 PGH S + PP P H A GG PP Sbjct: 131 PGHLPSHGQRPPSPSHGHAPPSGGHTPP 158
>CCNK_MOUSE (O88874) Cyclin-K| Length = 554 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASHMAAAL 349 PP P ++ + P RLPP H ++ HPPP G LPPAS+ A+ Sbjct: 481 PPPPPTYNPNFPPPPPRLPPTH--AVPPHPPP---------GLGLPPASYPPPAV 524
>TIP60_DROME (Q960X4) Histone acetyltransferase Tip60 (EC 2.3.1.48)| Length = 541 Score = 29.6 bits (65), Expect = 5.9 Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 7/98 (7%) Frame = +2 Query: 239 PPGHPDSLREHPPPPRHHFAGHGGGTLPPASHMAAALEERI-------GAEIEEAHALLG 397 P G P+S+ P GG L +++AAAL++RI G H+L Sbjct: 141 PAGIPNSVAPPGTPS-------SGGELVNGNNLAAALQKRINRKRKNHGGSAHGHHSLTS 193 Query: 398 QNQRLSATHVALVQEVSAVRHELGHTARAIGAAQQEGD 511 Q Q+ S H Q +A + GAA +GD Sbjct: 194 QQQQ-SHPHPTTPQTPTATPVHVTGDGLISGAANDDGD 230
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/65 (33%), Positives = 24/65 (36%) Frame = +2 Query: 95 SRGAGGGNXXXXXXXXXXXXXXXXLDEFREPPRLPPHHLDDFRDPARLPPGHPDSLREHP 274 SRG GGG L +FR PP P L+ R P PG P Sbjct: 8 SRGGGGGGFHRRGGGGGRGG----LHDFRSPP--PGMGLNQNRGPMGPGPGQSGPKPPIP 61 Query: 275 PPPRH 289 PPP H Sbjct: 62 PPPPH 66 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 11/63 (17%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGH-----------GGGTLPPAS 331 PP+ PP + P PP HP ++ PPP + G G+ PPAS Sbjct: 73 PPQQPPPQ----QPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPAS 128 Query: 332 HMA 340 A Sbjct: 129 SSA 131
>ENA_DROME (Q8T4F7) Protein enabled| Length = 834 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 9/60 (15%) Frame = +2 Query: 176 FREPPRLPPHHLDDFRDPARLP---------PGHPDSLREHPPPPRHHFAGHGGGTLPPA 328 + + P PP + + P ++P PG P + PPPP A GGG PPA Sbjct: 519 YGQVPMPPPMNPSQQQQPGQVPLNRMSSQGGPGGPPAPAPPPPPPSFGGAA-GGGPPPPA 577
>ID4_HUMAN (P47928) DNA-binding protein inhibitor ID-4 (Inhibitor of DNA| binding 4) Length = 161 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = +2 Query: 203 HHLDDFRDPARLPPGHPDSLREHPPP-PRHHFAGHGGGTLPPASHMAAALEERIGAEIEE 379 H +D D HP LR+ PPP P HH AG PP + + A + GA ++ Sbjct: 96 HVIDYILDLQLALETHPALLRQPPPPAPPHHPAGTCPAA-PPRTPLTALNTDPAGAVNKQ 154 Query: 380 AHALL 394 ++L Sbjct: 155 GDSIL 159
>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)| Length = 877 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPAS-HMAAALEERI 361 PP + L D RL P P +R P PP G LPP++ A A+ R Sbjct: 746 PPPVKNDWLPSGLDNPRLSPPSPGGVRGKPGPPAQSSLGGRNPPLPPSTGRPAPAIPNRP 805 Query: 362 G 364 G Sbjct: 806 G 806
>LIPB2_MOUSE (O35711) Liprin-beta-2 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein binding protein 2) (PTPRF-interacting protein binding protein 2) (Coiled-coil-like protein 1) Length = 882 Score = 29.3 bits (64), Expect = 7.8 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +2 Query: 341 AALEERIG---AEIEEAHALLGQNQRLSATHVALVQEVSAVRHELGHTARAIGAAQQEGD 511 A L+E++ AEIE H+ L ++ L + H QE+ H L + A ++ D Sbjct: 241 AQLQEQVALKDAEIERLHSQLSRSAALHSDHAERDQEI----HRLKMGMETLLVANEDKD 296 Query: 512 LRIREVYERLMK 547 RI E+ L K Sbjct: 297 RRIEELTGLLNK 308
>S12A2_SQUAC (P55013) Solute carrier family 12 member 2 (Bumetanide-sensitive| sodium-(potassium)-chloride cotransporter 1) (NA-K-CL symporter) (NKCC) Length = 1191 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +2 Query: 215 DFRDPARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPASHM 337 +F DPA P P S ++ PPPP + HGG PP+ M Sbjct: 109 NFVDPASDEP--PLSSQQQPPPPSSASSAHGGHQ-PPSESM 146
>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 549 Score = 29.3 bits (64), Expect = 7.8 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +2 Query: 239 PPGHPDSLREHPPPPRHHFAGHGGGTLPP 325 PP ++ P P+H FA H G PP Sbjct: 465 PPQQQPQQQQQQPNPQHQFAPHPNGQFPP 493
>LYL1_HUMAN (P12980) Lyl-1 protein (Lymphoblastic leukemia-derived sequence 1)| Length = 267 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = +2 Query: 227 PARLPPGHPDSLREHPPPPRHHFAGHGGGTLPP 325 PA PP P S P PP+ GH GG+ PP Sbjct: 13 PAPAPPPKPAS----PGPPQVEEVGHRGGSSPP 41
>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)| (P-Frk) Length = 375 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 5/56 (8%) Frame = +2 Query: 194 LPPHHLDDFRD---PARLPPGHPDSLREHPPPPRHHFAGHGGGTLPPA--SHMAAA 346 LPP ++ + P PP P HP P HH H PPA H AAA Sbjct: 262 LPPGVVNSYNGLGGPPAAPPPPPPPPHPHPHPHAHHL--HAAAAPPPAPPHHGAAA 315
>SOX17_MOUSE (Q61473) Transcription factor SOX-17| Length = 419 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = +2 Query: 242 PGHPDSLREHPPPPRHHFAGHGGGTLPPASHMAAALEERIGAEIEEAHALLGQNQR 409 P P + PPPP+ HG G P AL R G E + LLG+ R Sbjct: 313 PQQPLQPQAPPPPPQQQHPAHGPGQPSPPPE---ALPCRDGTESNQPTELLGEVDR 365
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Frame = +2 Query: 224 DPARLPPGHP--DSLREHPPPPRHHFAGHGGGTLPPASHMAAALEERIGAEIEEAH 385 DPA + H ++HPPPP H GG PP A E G + E H Sbjct: 86 DPAAVMHYHHLHQQQQQHPPPPHMQQQQHHGGPAPPPP--GGAPEHAPGVKEEYTH 139
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = +2 Query: 239 PPGH-PDSLREHPPPPRHHFAGHGGGTLPPAS 331 PPGH P + R P P HG LPPAS Sbjct: 1008 PPGHSPGTPRTFPSAPPRASGSHGSLLLPPAS 1039
>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)| (Cellular zinc finger anti-NF-kappa B protein) (Zinc finger protein Cezanne) Length = 843 Score = 29.3 bits (64), Expect = 7.8 Identities = 26/91 (28%), Positives = 31/91 (34%) Frame = +2 Query: 41 FRRLRMAGRHRNPLPSSFSRGAGGGNXXXXXXXXXXXXXXXXLDEFREPPRLPPHHLDDF 220 F +LR H LP SFS G+GG E PPR DD Sbjct: 41 FEQLRQV--HAGNLPPSFSEGSGGSRTPEKGFSDR---------EPTRPPRPILQRQDDI 89 Query: 221 RDPARLPPGHPDSLREHPPPPRHHFAGHGGG 313 RL G + R H + +GGG Sbjct: 90 VQEKRLSRGISHASSSIVSLARSHVSSNGGG 120
>BAB1_DROME (Q9W0K7) Protein bric-a-brac 1| Length = 977 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +2 Query: 221 RDPARLPPGHPDSLREHPPPPRHHFAGHGGG 313 R+ + L PG R PPPP HH G GG Sbjct: 444 RELSGLGPGPSAEPRLPPPPPHHHGGGGVGG 474
>EXTN_DAUCA (P06599) Extensin precursor| Length = 306 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +2 Query: 185 PPRLPPHHLDDFRDPARLPPGH-PDSLREHPPPPRHHFAGHGGGTLPPASH 334 PP PP + ++ P PP H P PPPP+HH++ T PP H Sbjct: 262 PP--PPTPVYKYKSPP--PPMHSPPPPVYSPPPPKHHYS----YTSPPPPH 304 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,200,606 Number of Sequences: 219361 Number of extensions: 1197837 Number of successful extensions: 6811 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 5630 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6602 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
