ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart12d08 |
|---|---|
| Clone Library Name | barley_pub |
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 208 bits (530), Expect = 8e-54 Identities = 105/191 (54%), Positives = 137/191 (71%), Gaps = 1/191 (0%) Frame = +2 Query: 2 EKLEEAQENLGIDSHDYVPVTYVAEVNWFQEAMRFAPTAFLVGLLYFMGKRMQSGF-NIX 178 E++++ Q+ L I D +P+ Y+ + F F PT L+G LYF+ +++ S N Sbjct: 197 EQMDQIQDLLNIPPRDRIPIKYIERSSPFTFLFPFLPTIILLGGLYFITRKINSSPPNAN 256 Query: 179 XXXXXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL 358 +FN+GK+ +K + K+ FK+VAGCDEAKQEIMEFVHFLKNP KY +L Sbjct: 257 GGGGGGLGGMFNVGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKL 316 Query: 359 GAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEA 538 GAKIP+GA+L GPPGTGKTLLAKATAGE+ VPF+S+SGS+F+EMFVGVG SRVR+LF +A Sbjct: 317 GAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQA 376 Query: 539 RQCAPSIVFID 571 R APSI+FID Sbjct: 377 RSMAPSIIFID 387
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 197 bits (501), Expect = 2e-50 Identities = 99/189 (52%), Positives = 131/189 (69%) Frame = +2 Query: 5 KLEEAQENLGIDSHDYVPVTYVAEVNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXX 184 KL++AQ+ L ID +PV YV E NW + + PT ++ + ++ +R Sbjct: 265 KLQKAQDELDIDKDFRIPVLYVQEGNWAKAMFQILPTVLMIAGIIWLTRRSAQA------ 318 Query: 185 XXXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGA 364 IF + ++ K + + K+ FKDVAGCDEAK+EIMEFV FLK P +YE++GA Sbjct: 319 AGGSRGGIFGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGA 378 Query: 365 KIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQ 544 KIP+GA+L GPPGTGKTLLAKATAGE+GVPF +SGS+F+EMFVGVG +RVR+LF+ AR+ Sbjct: 379 KIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARE 438 Query: 545 CAPSIVFID 571 APSIVFID Sbjct: 439 NAPSIVFID 447
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 188 bits (477), Expect = 1e-47 Identities = 99/188 (52%), Positives = 132/188 (70%) Frame = +2 Query: 8 LEEAQENLGIDSHDYVPVTYVAEVNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXX 187 LE Q+ LGI+ + VPV Y+AE + + PT ++ L + +R +G Sbjct: 226 LETLQQELGIEGENRVPVVYIAESDG-SFLLSMLPTVLIIAFLLYTIRRGPAGIG---RT 281 Query: 188 XXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAK 367 +F++G+ T + + V FKDVAGC+EAK EIMEFV+FLKNPK+Y++LGAK Sbjct: 282 GRGMGGLFSVGETTAKVL--KDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 339 Query: 368 IPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQC 547 IPKGA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVGP+RVR+LF AR+ Sbjct: 340 IPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKN 399 Query: 548 APSIVFID 571 AP I+FID Sbjct: 400 APCILFID 407
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 188 bits (477), Expect = 1e-47 Identities = 99/188 (52%), Positives = 132/188 (70%) Frame = +2 Query: 8 LEEAQENLGIDSHDYVPVTYVAEVNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXX 187 LE Q+ LGI+ + VPV Y+AE + + PT ++ L + +R +G Sbjct: 225 LETLQQELGIEGENRVPVVYIAESDG-SFLLSMLPTVLIIAFLLYTIRRGPAGIG---RT 280 Query: 188 XXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAK 367 +F++G+ T + + V FKDVAGC+EAK EIMEFV+FLKNPK+Y++LGAK Sbjct: 281 GRGMGGLFSVGETTAKVL--KDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 338 Query: 368 IPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQC 547 IPKGA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVGP+RVR+LF AR+ Sbjct: 339 IPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKN 398 Query: 548 APSIVFID 571 AP I+FID Sbjct: 399 APCILFID 406
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 177 bits (450), Expect = 1e-44 Identities = 99/188 (52%), Positives = 130/188 (69%) Frame = +2 Query: 8 LEEAQENLGIDSHDYVPVTYVAEVNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXX 187 LE AQ LGI+ + V Y E + PT LV +L + +R G Sbjct: 93 LESAQWELGIEPTNQAAVVYTTESDG-SFLRSLVPTLVLVSILLYAMRRGPMG----TGR 147 Query: 188 XXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAK 367 +F++G+ T K+ KN+ + V F DVAGC+EAK EIMEFV+FLKNPK+Y++LGAK Sbjct: 148 GGRGGGLFSVGETTA-KILKNNID-VRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAK 205 Query: 368 IPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQC 547 IPKGA+L GPPGTGKTLLAKATAGE+ VPF++++GS+F+EMFVGVGP+RVR++F AR+ Sbjct: 206 IPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKH 265 Query: 548 APSIVFID 571 AP I+FID Sbjct: 266 APCILFID 273
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 166 bits (419), Expect = 6e-41 Identities = 93/189 (49%), Positives = 116/189 (61%) Frame = +2 Query: 5 KLEEAQENLGIDSHDYVPVTYVAEVNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXX 184 K+E AQE G W P + L +F+ + Q G Sbjct: 99 KVEPAQETSG----------------WVTFLTTIIPFVIIFILFFFLLNQAQGG------ 136 Query: 185 XXXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGA 364 + N GK+ K+ K +V FKDVAG DE KQE++E V FLK+P+K+ ELGA Sbjct: 137 ----GSRVMNFGKSKA-KLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGA 191 Query: 365 KIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQ 544 +IPKG LLVGPPGTGKTLLAKA AGE+GVPF SISGSDF+EMFVGVG SRVR+LF+ A++ Sbjct: 192 RIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKK 251 Query: 545 CAPSIVFID 571 AP ++FID Sbjct: 252 NAPCLIFID 260
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 165 bits (417), Expect = 1e-40 Identities = 87/163 (53%), Positives = 108/163 (66%) Frame = +2 Query: 83 WFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSKNK 262 W Q P + L +F+ + Q G + N GK+ KM K K Sbjct: 114 WVQFFTGIIPFIIIFILFFFLLSQAQGG----------GSRVMNFGKSKA-KMVNEDKKK 162 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 442 FKDVAG DE KQE++E V FLK+P+K+ +GA+IPKG LLVGPPGTGKTLLA+A AGE Sbjct: 163 AKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAGE 222 Query: 443 SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +GVPF SISGSDF+EMFVGVG SRVR+LF+ A++ AP I+FID Sbjct: 223 AGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFID 265
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 161 bits (407), Expect = 1e-39 Identities = 85/165 (51%), Positives = 112/165 (67%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P FLVG+ F ++MQ G + GK+ KM + Sbjct: 104 ISWF-------PMLFLVGVWVFFMRQMQGG----------GGKAMSFGKSRA-KMLNQDQ 145 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 KV F DVAGCDEAK+E+ E V FL++P K++ LG KIPKG L+VGPPGTGKTLLA+A A Sbjct: 146 IKVTFADVAGCDEAKEEVGEIVDFLRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIA 205 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP ++FID Sbjct: 206 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFID 250
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 160 bits (404), Expect = 3e-39 Identities = 87/163 (53%), Positives = 103/163 (63%) Frame = +2 Query: 83 WFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSKNK 262 W Q P VG+ + M G F +A K +K Sbjct: 137 WVQILSYIIPMLLFVGIFWLM----MGGMGARGGGGGGNPMSFGKSRA---KQQDGKTSK 189 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 442 V F DVAG +E KQE++E V FLKNPKKY +LGA+IP G LL GPPGTGKTLLAKA AGE Sbjct: 190 VRFADVAGSEEEKQELVEVVDFLKNPKKYHDLGARIPAGVLLEGPPGTGKTLLAKAVAGE 249 Query: 443 SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +GVPF SISGSDF+EMFVGVG SRVR+LF+ A++ APSI+FID Sbjct: 250 AGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFID 292
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 159 bits (403), Expect = 4e-39 Identities = 90/164 (54%), Positives = 112/164 (68%), Gaps = 1/164 (0%) Frame = +2 Query: 83 WFQEAMR-FAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSKN 259 WF+ A F P LVG+ +F+ +R QSG N GK+ ++ + Sbjct: 108 WFRIASTLFLPILLLVGI-FFLFRRAQSG---------PGSQAMNFGKSKA-RVQMEPQT 156 Query: 260 KVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 +V F DVAG ++AK E+ E V FLKN ++ ELGAKIPKG LLVGPPGTGKTLLAKA AG Sbjct: 157 QVTFGDVAGIEQAKLELTEVVDFLKNADRFTELGAKIPKGVLLVGPPGTGKTLLAKAVAG 216 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E+GVPF SISGS+F+EMFVGVG SRVR+LF++A+ AP IVFID Sbjct: 217 EAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFID 260
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 158 bits (400), Expect = 9e-39 Identities = 82/165 (49%), Positives = 110/165 (66%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P L+G+ F ++MQ G + GK+ +M + Sbjct: 104 ISWF-------PMLLLIGVWVFFMRQMQVG---------GGKGAMSFGKSKA-RMLPEDQ 146 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 K+ F DVAGCDEAK+E+ E V +LK P ++++LG KIPKG L+VGPPGTGKTLLAKA A Sbjct: 147 VKITFSDVAGCDEAKEEVQELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIA 206 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF +ISGSDF+EMFVGVG SRVR++F+ +R+ AP I+FID Sbjct: 207 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFID 251
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 157 bits (398), Expect = 2e-38 Identities = 81/165 (49%), Positives = 110/165 (66%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P L+G+ F ++MQ G + GK+ +M + Sbjct: 104 ISWF-------PMLLLIGVWIFFMRQMQGG---------GGKGAMSFGKSKA-RMLTEDQ 146 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 K F DVAGCDEAK+E+ E V +L+ P ++++LG KIPKG L+VGPPGTGKTLLAKA A Sbjct: 147 IKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+FID Sbjct: 207 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFID 251
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 157 bits (398), Expect = 2e-38 Identities = 81/165 (49%), Positives = 110/165 (66%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P L+G+ F ++MQ G + GK+ +M + Sbjct: 104 ISWF-------PMLLLIGVWIFFMRQMQGG---------GGKGAMSFGKSKA-RMLTEDQ 146 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 K F DVAGCDEAK+E+ E V +L+ P ++++LG KIPKG L+VGPPGTGKTLLAKA A Sbjct: 147 IKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+FID Sbjct: 207 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFID 251
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 157 bits (398), Expect = 2e-38 Identities = 81/165 (49%), Positives = 110/165 (66%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P L+G+ F ++MQ G + GK+ +M + Sbjct: 104 ISWF-------PMLLLIGVWIFFMRQMQGG---------GGKGAMSFGKSKA-RMLTEDQ 146 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 K F DVAGCDEAK+E+ E V +L+ P ++++LG KIPKG L+VGPPGTGKTLLAKA A Sbjct: 147 IKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+FID Sbjct: 207 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFID 251
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 157 bits (398), Expect = 2e-38 Identities = 81/165 (49%), Positives = 110/165 (66%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P L+G+ F ++MQ G + GK+ +M + Sbjct: 104 ISWF-------PMLLLIGVWIFFMRQMQGG---------GGKGAMSFGKSKA-RMLTEDQ 146 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 K F DVAGCDEAK+E+ E V +L+ P ++++LG KIPKG L+VGPPGTGKTLLAKA A Sbjct: 147 IKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+FID Sbjct: 207 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFID 251
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 157 bits (398), Expect = 2e-38 Identities = 81/165 (49%), Positives = 110/165 (66%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P L+G+ F ++MQ G + GK+ +M + Sbjct: 104 ISWF-------PMLLLIGVWIFFMRQMQGG---------GGKGAMSFGKSKA-RMLTEDQ 146 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 K F DVAGCDEAK+E+ E V +L+ P ++++LG KIPKG L+VGPPGTGKTLLAKA A Sbjct: 147 IKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+FID Sbjct: 207 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFID 251
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 157 bits (398), Expect = 2e-38 Identities = 87/168 (51%), Positives = 112/168 (66%), Gaps = 1/168 (0%) Frame = +2 Query: 71 AEVNWFQEAMRFA-PTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDK 247 +E N+F + + + P ++GL FM RMQ IF +G A K+ Sbjct: 113 SESNFFTDMLGWLMPILVILGLWMFMANRMQKNMG---------GGIFGMGSAK--KLIN 161 Query: 248 NSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK 427 K V F D+AG +EAK+E++E V FLK P++Y LGAKIPKG LLVGPPGTGKTLLAK Sbjct: 162 AEKPNVRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAK 221 Query: 428 ATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A AGE+ VPF S+ GS F+EMFVG+G SRVR+LF+ A++ APSI+FID Sbjct: 222 AVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFID 269
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 157 bits (398), Expect = 2e-38 Identities = 87/168 (51%), Positives = 112/168 (66%), Gaps = 1/168 (0%) Frame = +2 Query: 71 AEVNWFQEAMRFA-PTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDK 247 +E N+F + + + P ++GL FM RMQ IF +G A K+ Sbjct: 113 SESNFFTDMLGWLMPILVILGLWMFMANRMQKNMG---------GGIFGMGSAK--KLIN 161 Query: 248 NSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK 427 K V F D+AG +EAK+E++E V FLK P++Y LGAKIPKG LLVGPPGTGKTLLAK Sbjct: 162 AEKPNVRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAK 221 Query: 428 ATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A AGE+ VPF S+ GS F+EMFVG+G SRVR+LF+ A++ APSI+FID Sbjct: 222 AVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFID 269
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 157 bits (397), Expect = 2e-38 Identities = 84/154 (54%), Positives = 106/154 (68%) Frame = +2 Query: 110 PTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGC 289 P LVGL + M RMQ G + F GK+ ++ K+ K F DVAG Sbjct: 121 PLLLLVGL-FVMFSRMQGGARMG----------FGFGKSRAKQLSKDMP-KTTFADVAGV 168 Query: 290 DEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSIS 469 DEA +E+ E FL+NP +Y+ LGAKIPKG LL GPPGTGKTLLA+A AGE+GVPF +IS Sbjct: 169 DEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTIS 228 Query: 470 GSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GSDF+EMFVGVG SRVR+LF++A+Q +P I+F+D Sbjct: 229 GSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVD 262
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 157 bits (397), Expect = 2e-38 Identities = 84/154 (54%), Positives = 106/154 (68%) Frame = +2 Query: 110 PTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGC 289 P LVGL + M RMQ G + F GK+ ++ K+ K F DVAG Sbjct: 121 PLLLLVGL-FVMFSRMQGGARMG----------FGFGKSRAKQLSKDMP-KTTFADVAGV 168 Query: 290 DEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSIS 469 DEA +E+ E FL+NP +Y+ LGAKIPKG LL GPPGTGKTLLA+A AGE+GVPF +IS Sbjct: 169 DEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTIS 228 Query: 470 GSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GSDF+EMFVGVG SRVR+LF++A+Q +P I+F+D Sbjct: 229 GSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVD 262
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 157 bits (396), Expect = 3e-38 Identities = 87/168 (51%), Positives = 111/168 (66%), Gaps = 1/168 (0%) Frame = +2 Query: 71 AEVNWFQEAMRFA-PTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDK 247 +E N+F + + + P ++GL FM RMQ IF +G + K+ Sbjct: 119 SESNFFADILGWLLPVLVILGLWMFMASRMQKNMG---------GGIFGMGSSK--KLIN 167 Query: 248 NSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK 427 K KV F D+AG +EAK+E++E V FLK P +Y LGAKIPKG LLVGPPGTGKTLLAK Sbjct: 168 AEKPKVRFNDMAGNEEAKEEVVEIVDFLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAK 227 Query: 428 ATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A AGE+ VPF S+ GS F+EMFVG+G SRVR+LF A++ APSI+FID Sbjct: 228 AVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFID 275
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 157 bits (396), Expect = 3e-38 Identities = 82/165 (49%), Positives = 109/165 (66%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P L+G+ F ++MQ G + GK+ +M + Sbjct: 104 ISWF-------PMLLLIGVWIFFMRQMQMG---------GGKGAMSFGKSKA-RMLSEDQ 146 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 + F DVAGCDEAK+E+ E V +LK P ++++LG KIPKG L+VGPPGTGKTLLAKA A Sbjct: 147 IQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIA 206 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF +ISGSDF+EMFVGVG SRVR++F+ AR+ AP I+FID Sbjct: 207 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFID 251
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 157 bits (396), Expect = 3e-38 Identities = 88/167 (52%), Positives = 110/167 (65%), Gaps = 1/167 (0%) Frame = +2 Query: 74 EVNWFQEAMRFA-PTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKN 250 E N+ E ++ P L + F KRM S + IF+ G A +++ Sbjct: 81 ERNYLIETFQYLFPLLILFFVWRFFFKRMASNVS------GLGSSIFSAGHARSAAVEEG 134 Query: 251 SKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKA 430 K F DVAG DEAK+E+ME V FLK PKKY E+G KIP+G LLVGPPGTGKTLLA+A Sbjct: 135 -KVTTRFADVAGVDEAKEELMEVVDFLKFPKKYTEIGGKIPRGVLLVGPPGTGKTLLARA 193 Query: 431 TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 AGE+ VPF ISGSDF+EMFVG+G SRVR+LF++AR+ AP I+FID Sbjct: 194 VAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFID 240
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 155 bits (393), Expect = 6e-38 Identities = 81/165 (49%), Positives = 109/165 (66%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P L+G+ F ++MQ G + GK+ +M + Sbjct: 104 ISWF-------PMLLLIGVWIFFMRQMQMG---------GGKGAMSFGKSKA-RMLSEDQ 146 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 + F DVAGCDEAK+E+ E V +LK P ++++LG KIPKG L+VGPPGTGKTLLAKA A Sbjct: 147 IQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIA 206 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF +ISGSDF+EMFVGVG SRVR++F+ +R+ AP I+FID Sbjct: 207 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFID 251
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 155 bits (392), Expect = 8e-38 Identities = 81/165 (49%), Positives = 107/165 (64%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P L+G+ F ++M G GK+ + Sbjct: 109 ISWF-------PMLLLIGVWVFFMRQMHGG-----------GKAMGFGKSKARLLSDKGP 150 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 K+ FKDVAG DEAK+E+ E V FL++P K+++LG KIPKG LL+GPPGTGKTLLAKA A Sbjct: 151 -KITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIA 209 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF SISGSDF+EMFVGVG SRVR++F++ ++ AP I+FID Sbjct: 210 GEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFID 254
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 155 bits (392), Expect = 8e-38 Identities = 81/165 (49%), Positives = 107/165 (64%) Frame = +2 Query: 77 VNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSK 256 ++WF P L+G+ F ++M G GK+ + Sbjct: 109 ISWF-------PMLLLIGVWVFFMRQMHGG-----------GKAMGFGKSKARLLSDKGP 150 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 K+ FKDVAG DEAK+E+ E V FL++P K+++LG KIPKG LL+GPPGTGKTLLAKA A Sbjct: 151 -KITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIA 209 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE+ VPF SISGSDF+EMFVGVG SRVR++F++ ++ AP I+FID Sbjct: 210 GEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFID 254
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 155 bits (392), Expect = 8e-38 Identities = 84/154 (54%), Positives = 105/154 (68%) Frame = +2 Query: 110 PTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGC 289 P LVGL + M RMQ G + F GK+ ++ K+ K F DVAG Sbjct: 121 PLLLLVGL-FVMFSRMQGGARMG----------FGFGKSRAKQLSKDMP-KTTFADVAGV 168 Query: 290 DEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSIS 469 DEA +E+ E FL+NP +Y+ LGAKIPKG LL GPPGTGKTLLA+A AGE+GVPF +IS Sbjct: 169 DEAVEELYEIKDFLQNPCRYQTLGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTIS 228 Query: 470 GSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GSDF+EMFVGVG SRVR+LF +A+Q +P I+F+D Sbjct: 229 GSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVD 262
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 154 bits (389), Expect = 2e-37 Identities = 76/120 (63%), Positives = 96/120 (80%) Frame = +2 Query: 212 NIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLV 391 N GK+ + ++K V F DVAG DEAK+E+ E V FLK P+++ +GAKIPKG LLV Sbjct: 153 NFGKSKA-RFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLV 211 Query: 392 GPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ AP ++FID Sbjct: 212 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFID 271
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 154 bits (389), Expect = 2e-37 Identities = 84/174 (48%), Positives = 110/174 (63%) Frame = +2 Query: 50 YVPVTYVAEVNWFQEAMRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKAT 229 ++ V A NW A + ++G++ ++ R S N GK+ Sbjct: 90 HIDVDVHAVSNWINVASNWIIPLIIIGVVIWLLSRSASS---------NTTGALNFGKSK 140 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTG 409 + +K + F DVAG +EAK+E+ E V FLKNP K+ +GA IPKG LLVGPPGTG Sbjct: 141 A-RFQMVAKTGIMFDDVAGIEEAKEELAEVVAFLKNPSKFLAVGASIPKGVLLVGPPGTG 199 Query: 410 KTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 KTLLAKA AGE+ VPF SISGS+F+EMFVGVG SRVR+LF++A+Q AP +VFID Sbjct: 200 KTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFID 253
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 153 bits (387), Expect = 3e-37 Identities = 73/104 (70%), Positives = 90/104 (86%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 KV F DVAG +E KQE++E V FLK+PK++ +LGA+IP G LL GPPGTGKTLLAKA AG Sbjct: 183 KVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAG 242 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E+GVPF SISGSDF+EMFVGVG SRVR+LF++A++ AP+I+FID Sbjct: 243 EAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFID 286
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 153 bits (387), Expect = 3e-37 Identities = 73/104 (70%), Positives = 90/104 (86%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 KV F DVAG +E KQE++E V FLK+PK++ +LGA+IP G LL GPPGTGKTLLAKA AG Sbjct: 183 KVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAG 242 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E+GVPF SISGSDF+EMFVGVG SRVR+LF++A++ AP+I+FID Sbjct: 243 EAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFID 286
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 152 bits (385), Expect = 5e-37 Identities = 78/158 (49%), Positives = 108/158 (68%) Frame = +2 Query: 98 MRFAPTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSKNKVFFKD 277 + + P F +G+ F+ ++M G N+ FN GK+ K+ K KV FKD Sbjct: 106 LSWLPILFFIGIWIFLLRQMSGGGNVNRA--------FNFGKSRA-KVYIEEKPKVTFKD 156 Query: 278 VAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPF 457 VAG +E K+E+ E + +LK+P K+++LG + PKG LL G PG GKTLLAKA AGE+ VPF Sbjct: 157 VAGIEEVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPF 216 Query: 458 MSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +S+SGSDF+EMFVGVG +RVR+LF+ A++ AP I+FID Sbjct: 217 ISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFID 254
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 152 bits (384), Expect = 7e-37 Identities = 77/120 (64%), Positives = 94/120 (78%) Frame = +2 Query: 212 NIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLV 391 N GK+ + +K V F DVAG DEAK+E E V FLK P+++ +GAKIPKG LLV Sbjct: 154 NFGKSKA-RFQMEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLV 212 Query: 392 GPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ +P IVFID Sbjct: 213 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFID 272
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 151 bits (382), Expect = 1e-36 Identities = 80/152 (52%), Positives = 105/152 (69%) Frame = +2 Query: 116 AFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGCDE 295 A L+GL+ + +R + + GK+ + +K V F DVAG DE Sbjct: 170 AILIGLVVMVVRRSANA----------SGQAMSFGKSKA-RFQMEAKTGVGFDDVAGIDE 218 Query: 296 AKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGS 475 AK+E+ E V FLK P+K+ +GAKIP+G LL+GPPGTGKTLLAKA AGE+GVPF SISGS Sbjct: 219 AKEELQEVVTFLKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGS 278 Query: 476 DFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +F+EMFVGVG SRVR+LF++A++ AP +VFID Sbjct: 279 EFVEMFVGVGASRVRDLFKKAKENAPCLVFID 310
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 151 bits (381), Expect = 1e-36 Identities = 87/185 (47%), Positives = 115/185 (62%), Gaps = 2/185 (1%) Frame = +2 Query: 23 ENLGIDSHDYVPVTYVAEVNWFQEAMRFAPTAFLVGLLYFM--GKRMQSGFNIXXXXXXX 196 +N ID + + V V+W + P ++ L +F G + SG Sbjct: 99 KNKLIDFDAHPSSSNVNLVSWLSNLL--LPLILIITLFFFFRRGNKSSSG---------- 146 Query: 197 XXXIFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPK 376 FN GKA + +K + F+DVAG +EAK+E+ E V FLK+ +K+ +GA IPK Sbjct: 147 PGQAFNFGKAKA-RFHMEAKTGIVFEDVAGIEEAKEELQEIVAFLKDSRKFTNVGATIPK 205 Query: 377 GALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 556 G LLVGPPGTGKTLLAKA AGE+ PF SISGS+F+EMFVGVG SRVR+LF++A++ AP Sbjct: 206 GVLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPC 265 Query: 557 IVFID 571 IVFID Sbjct: 266 IVFID 270
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 149 bits (375), Expect = 7e-36 Identities = 74/107 (69%), Positives = 87/107 (81%) Frame = +2 Query: 251 SKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKA 430 +K V F DVAG +EAK+E E V FLK P+ + +GAKIPKG LLVGPPGTGKTLLAKA Sbjct: 166 AKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKA 225 Query: 431 TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A+ AP IVFID Sbjct: 226 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFID 272
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 148 bits (373), Expect = 1e-35 Identities = 85/168 (50%), Positives = 106/168 (63%), Gaps = 1/168 (0%) Frame = +2 Query: 71 AEVNWFQEAMRFA-PTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDK 247 A+ +WF + + P VG+ F R +G F KA V + Sbjct: 115 AKNSWFGTLLSWVIPPLIFVGIWSFFLNRNNNG-------APGGALAFTKSKAKVYV--E 165 Query: 248 NSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK 427 KV F DVAG +EAK E+ E V FLK P++Y LGAKIPKG LLVGPPGTGKTLLAK Sbjct: 166 GDSTKVTFDDVAGVEEAKTELSEVVDFLKFPQRYTALGAKIPKGVLLVGPPGTGKTLLAK 225 Query: 428 ATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A AGE+GVPF ISGS+F+E+FVG G +RVR+LF++A++ AP IVFID Sbjct: 226 AAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFID 273
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 147 bits (371), Expect = 2e-35 Identities = 78/154 (50%), Positives = 100/154 (64%) Frame = +2 Query: 110 PTAFLVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGKATVTKMDKNSKNKVFFKDVAGC 289 P F+ GL+Y G ++GK+T + ++ V FKD+AG Sbjct: 140 PIIFITGLVYLFQNSENFG-------GGSGQSPMSLGKSTA-RFERRPDTGVSFKDIAGI 191 Query: 290 DEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSIS 469 DEAK E E V FLK P KY +GAKIPKG LLVGPPGTGKTLLAKA A E+ VPF S++ Sbjct: 192 DEAKTEFEEIVSFLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVA 251 Query: 470 GSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GS+F+EMF+G+G +RVR+LF++A + AP IVFID Sbjct: 252 GSEFVEMFIGIGAARVRDLFKKASENAPCIVFID 285
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 147 bits (370), Expect = 3e-35 Identities = 73/113 (64%), Positives = 88/113 (77%) Frame = +2 Query: 233 TKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGK 412 +K + + V F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGK Sbjct: 249 SKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 308 Query: 413 TLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF++A+ AP IVFID Sbjct: 309 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 361
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 147 bits (370), Expect = 3e-35 Identities = 73/113 (64%), Positives = 88/113 (77%) Frame = +2 Query: 233 TKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGK 412 +K + + V F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGK Sbjct: 240 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 299 Query: 413 TLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF++A+ AP IVFID Sbjct: 300 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 352
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 146 bits (369), Expect = 4e-35 Identities = 73/113 (64%), Positives = 88/113 (77%) Frame = +2 Query: 233 TKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGK 412 +K + + V F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGK Sbjct: 237 SKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 296 Query: 413 TLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF++A+ AP IVFID Sbjct: 297 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 349
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 146 bits (369), Expect = 4e-35 Identities = 73/113 (64%), Positives = 87/113 (76%) Frame = +2 Query: 233 TKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGK 412 +K + + V F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGK Sbjct: 217 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 276 Query: 413 TLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF+ A+ AP IVFID Sbjct: 277 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFID 329
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 145 bits (366), Expect = 8e-35 Identities = 72/113 (63%), Positives = 87/113 (76%) Frame = +2 Query: 233 TKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGK 412 +K + + V F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGK Sbjct: 240 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 299 Query: 413 TLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TLLA+A AGE+G PF S + S+F+E+FVGVG SRVR+LF++A+ AP IVFID Sbjct: 300 TLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 352
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 143 bits (361), Expect = 3e-34 Identities = 68/107 (63%), Positives = 84/107 (78%) Frame = +2 Query: 251 SKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKA 430 +K V F DV GCDEA+ E+ E V FLK+P KYE LG K+PKG LL GPPGTGKTLLA+A Sbjct: 274 AKTNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARA 333 Query: 431 TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TAGE+GV F +SGS+F E++VGVG R+R+LF +AR AP+I+FID Sbjct: 334 TAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFID 380
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 143 bits (360), Expect = 4e-34 Identities = 85/197 (43%), Positives = 125/197 (63%), Gaps = 7/197 (3%) Frame = +2 Query: 2 EKLEEAQENLGIDSHDYVPVTYVAEVNWFQEAM-RFAPTAFLVGLLYFMGKRM-----QS 163 EKL A++ L I++ D +PV+Y +F A+ TA + +L+++ + + Sbjct: 224 EKLRAAEDELNIEAKDRIPVSY-KRTGFFGNALYSVGMTAVGLAILWYVFRLAGMTGREG 282 Query: 164 GFNIXXXXXXXXXXIFN-IGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNP 340 GF+ FN + A T +D V FKDVAG EAK E+ EFV +LK+P Sbjct: 283 GFSA-----------FNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFVDYLKSP 331 Query: 341 KKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVR 520 +++ +LGAK+PKGALL+GPPG GKTLLAKA A E+ VPF++++G +F+E+ G+G +RVR Sbjct: 332 ERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVR 391 Query: 521 NLFQEARQCAPSIVFID 571 +LF+EAR AP IV+ID Sbjct: 392 SLFKEARARAPCIVYID 408
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 142 bits (359), Expect = 5e-34 Identities = 77/152 (50%), Positives = 98/152 (64%), Gaps = 2/152 (1%) Frame = +2 Query: 122 LVGLLYFMGKRMQSGFNIXXXXXXXXXXIFNIGK--ATVTKMDKNSKNKVFFKDVAGCDE 295 L+ ++ F+G + QS IFN GK A + K DK F D+AG E Sbjct: 174 LIAIIIFLGYKAQS--------RAASGGIFNPGKNQAVIVKTDKK------FTDIAGNKE 219 Query: 296 AKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGS 475 +E+ E V +LKNPKKY GA+ PKG LL GPPGTGKTLLAKATAGE+ VPF IS S Sbjct: 220 PIEEVQELVDYLKNPKKYAAAGARFPKGILLGGPPGTGKTLLAKATAGEANVPFFFISAS 279 Query: 476 DFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+E++VG+G RVR +F+EAR+ AP+I+FID Sbjct: 280 SFVELYVGLGAKRVREMFKEARKLAPAIIFID 311
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 140 bits (354), Expect = 2e-33 Identities = 69/111 (62%), Positives = 84/111 (75%) Frame = +2 Query: 239 MDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 +D V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL Sbjct: 270 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP ++FID Sbjct: 330 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFID 380
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 140 bits (354), Expect = 2e-33 Identities = 69/111 (62%), Positives = 84/111 (75%) Frame = +2 Query: 239 MDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 +D V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL Sbjct: 270 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTL 329 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP ++FID Sbjct: 330 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFID 380
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 140 bits (353), Expect = 3e-33 Identities = 69/111 (62%), Positives = 84/111 (75%) Frame = +2 Query: 239 MDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 +D V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTL Sbjct: 328 VDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTL 387 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 LA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP ++FID Sbjct: 388 LARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFID 438
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 136 bits (343), Expect = 4e-32 Identities = 67/122 (54%), Positives = 88/122 (72%) Frame = +2 Query: 206 IFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGAL 385 IF+IGK K +K+ V F ++AG E K E++E V +LKNP KY ++GA+ P+G + Sbjct: 210 IFSIGKTQA----KLAKSSVRFDNIAGLQEEKHELLEIVDYLKNPLKYAQMGARSPRGVI 265 Query: 386 LVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVF 565 L GPPGTGKTLLAKA AGE+GVPF +GS F +M VGVG RVR+LF +A++ AP I+F Sbjct: 266 LYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIF 325 Query: 566 ID 571 ID Sbjct: 326 ID 327
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 136 bits (342), Expect = 5e-32 Identities = 67/122 (54%), Positives = 88/122 (72%) Frame = +2 Query: 206 IFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGAL 385 IF+IGK K +K+ V F ++AG E K E++E V +LKNP KY ++GA+ P+G + Sbjct: 213 IFSIGKTQA----KLAKSTVKFTNIAGLQEEKHELLEIVDYLKNPLKYAQMGARSPRGVI 268 Query: 386 LVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVF 565 L GPPGTGKTLLAKA AGE+GVPF +GS F +M VGVG RVR+LF +A++ AP I+F Sbjct: 269 LYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIF 328 Query: 566 ID 571 ID Sbjct: 329 ID 330
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 134 bits (338), Expect = 1e-31 Identities = 62/103 (60%), Positives = 81/103 (78%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 442 V F DV GCDE K+E+++ V FL+NP+K+ ++GAK+PKG LLVGPPG GKTLLAKA +GE Sbjct: 163 VSFSDVQGCDEVKKELVDVVEFLRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKAVSGE 222 Query: 443 SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + VPF+ SGS F E+ VG+G SR+R LF A+Q +P +VFID Sbjct: 223 AQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFID 265
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 119 bits (297), Expect = 8e-27 Identities = 57/94 (60%), Positives = 72/94 (76%) Frame = +2 Query: 290 DEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSIS 469 DEAK E+ E V +LK+P+KY LG ++PKG LLVGPPGTGKTLLA+A AGE+ VPF + Sbjct: 207 DEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTA 266 Query: 470 GSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GS+F E+ VG G RVR+LF +A+ AP I+FID Sbjct: 267 GSEFDEVLVGQGARRVRDLFDKAKARAPCIIFID 300
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 112 bits (279), Expect = 1e-24 Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ + KVFFKDV G +E +EI E V +KNP + ELG PKG LL GPPGT Sbjct: 125 VKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGT 184 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLAKA AGE+ F+ + GS+ + F+G G VR +F+ AR+ APSI+FID Sbjct: 185 GKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFID 239
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 106 bits (264), Expect = 5e-23 Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TV K++K + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPG Sbjct: 172 TVMKVEKAPQET--YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 229 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF+ A + APSIVFID Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFID 285
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 106 bits (264), Expect = 5e-23 Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TV K++K + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPG Sbjct: 172 TVMKVEKAPQET--YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 229 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF+ A + APSIVFID Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFID 285
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 106 bits (264), Expect = 5e-23 Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TV K++K + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPG Sbjct: 172 TVMKVEKAPQET--YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 229 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF+ A + APSIVFID Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFID 285
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 106 bits (264), Expect = 5e-23 Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TV K++K + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPG Sbjct: 171 TVMKLEKAPQET--YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 228 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF+ A + APSIVFID Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFID 284
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 105 bits (262), Expect = 9e-23 Identities = 57/117 (48%), Positives = 73/117 (62%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 A V + K V + D+ G +E EI E + LKNP+ ++E+G PKG LL GPP Sbjct: 118 AYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPP 177 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GTGKTLLAKA A ES F+ + S+F + FVG G VR +F+ AR+ APSIVFID Sbjct: 178 GTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFID 234
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 105 bits (261), Expect = 1e-22 Identities = 55/116 (47%), Positives = 75/116 (64%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TV K++K + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPG Sbjct: 172 TVMKLEKAPQET--YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 229 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF+ A + PSIVFID Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFID 285
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 105 bits (261), Expect = 1e-22 Identities = 53/117 (45%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 ++++ M +N K V + DV G D KQEI E V L YE++G P+G LL GPP Sbjct: 156 SSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPP 215 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GTGKT+L KA A + F+ ++GS+F+ ++G GP VR++F+ AR+ APSI+FID Sbjct: 216 GTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFID 272
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 104 bits (259), Expect = 2e-22 Identities = 51/112 (45%), Positives = 79/112 (70%), Gaps = 1/112 (0%) Frame = +2 Query: 239 MDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKT 415 M+ + + V ++D+ G ++ QEI E V LK+P+ +E++G + PKG LL GPPGTGKT Sbjct: 159 MEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKT 218 Query: 416 LLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 LLAKA A E+ F+ + GS+ ++ F+G G S V+++F+ A++ APSI+FID Sbjct: 219 LLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFID 270
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 104 bits (259), Expect = 2e-22 Identities = 49/117 (41%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 ++++ + ++ K V + D+ GCD KQEI E V L + + Y+++G P+G LL GPP Sbjct: 139 SSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPP 198 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GTGKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+I+FID Sbjct: 199 GTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFID 255
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 103 bits (257), Expect = 4e-22 Identities = 49/117 (41%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 ++++ + ++ K V + D+ GCD KQEI E V L + + Y+++G P+G LL GPP Sbjct: 144 SSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPP 203 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GTGKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+I+FID Sbjct: 204 GTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFID 260
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 103 bits (257), Expect = 4e-22 Identities = 50/105 (47%), Positives = 73/105 (69%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 KV ++D+ +EAKQ+I E V + +++P+ ++ LG PKG LL GPPGTGKTLLA+A A Sbjct: 208 KVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALA 267 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E G F++++G + M F G R+R +F+EA + APSI+FID Sbjct: 268 NEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFID 312 Score = 97.1 bits (240), Expect = 3e-20 Identities = 46/105 (43%), Positives = 69/105 (65%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 KV + D+ G D KQ++ E V + L+ P+ + + G PKG LL GPPGTGKT+LAKA A Sbjct: 483 KVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVA 542 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 ESG F+++ G + + +VG +R +F++ARQ AP+++F D Sbjct: 543 TESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFD 587
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 102 bits (255), Expect = 6e-22 Identities = 53/117 (45%), Positives = 75/117 (64%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 +T+ M ++ K V + DV G D KQEI E V L Y ++G P+G LL GPP Sbjct: 118 STIPVMGESEKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPP 177 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GTGKT+L KA A + F+ ++GS+F++ ++G GP VR++F+ AR+ APSIVFID Sbjct: 178 GTGKTMLVKAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFID 234
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 102 bits (254), Expect = 8e-22 Identities = 50/104 (48%), Positives = 70/104 (67%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V ++D+ G +E KQE+ E V + LK + +E++G + PKG LL GPPGTGKTLLAKA A Sbjct: 449 VKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVAN 508 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 ESG F+S+ G + +VG +R +F++ARQ AP I+F D Sbjct: 509 ESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFD 552 Score = 101 bits (251), Expect = 2e-21 Identities = 49/115 (42%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V+++ + V ++D+ G E +++ E + +++P+ +E+LG + PKG LLVGPPGT Sbjct: 165 VSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGT 224 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLAKA A E+G F I+G + M +VG +R +F+EA + APSI+FID Sbjct: 225 GKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFID 279
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 102 bits (253), Expect = 1e-21 Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 +V K++K + + DV G D+ QEI E V L +P+ YEE+G + PKG +L G PG Sbjct: 175 SVMKLEKAPQET--YADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPG 232 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLAKA A ++ F+ I GS+ ++ ++G GP VR LF+ A + APSIVFID Sbjct: 233 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFID 288
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 102 bits (253), Expect = 1e-21 Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ + V + ++ G +E +E+ E V LKNP+ + E+G + PKG LL GPPGT Sbjct: 120 VKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGT 179 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKT+LAKA A ES F+ + S+F + FVG G VR LF+ A++ APSI+FID Sbjct: 180 GKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFID 234
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 101 bits (252), Expect = 1e-21 Identities = 51/115 (44%), Positives = 75/115 (65%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 VT M+ K V ++ + G +E +E+ E V LK P+ +E++G + PKG LL GPPGT Sbjct: 137 VTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGT 196 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLAKA A E+ F+ I S+F+ ++G G VR +F+ A++ +PSI+FID Sbjct: 197 GKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFID 251
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 100 bits (250), Expect = 2e-21 Identities = 54/116 (46%), Positives = 74/116 (63%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 +V KMDK+ + D+ G + QEI E V L +P+ YEE+G K PKG +L G PG Sbjct: 169 SVMKMDKSPTES--YSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPG 226 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLAKA A ++ F+ I GS+ ++ ++G GP R +F+ A + APSIVFID Sbjct: 227 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFID 282
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 100 bits (249), Expect = 3e-21 Identities = 49/117 (41%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 +++ + +N K V + DV G D KQEI E V L Y+++G P+G LL GPP Sbjct: 150 SSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPP 209 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GTGKT+L KA A + F+ ++GS+F++ ++G GP VR++F+ AR+ +P+I+FID Sbjct: 210 GTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFID 266
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 100 bits (248), Expect = 4e-21 Identities = 52/115 (45%), Positives = 73/115 (63%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ + V + D+ G DE +EI E V LK P+ +E++G + PKG LL GPPGT Sbjct: 165 VLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGT 224 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLAKA A + F+ ++ + ++ F+G G VR LF+ AR+ APSI+FID Sbjct: 225 GKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFID 279
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 99.8 bits (247), Expect = 5e-21 Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V K+DK + D+ G + QEI E V L +P+ YEE+G K PKG +L G PGT Sbjct: 179 VMKLDKAPTES--YADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGT 236 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF A + +PSIVFID Sbjct: 237 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFID 291
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 99.8 bits (247), Expect = 5e-21 Identities = 46/106 (43%), Positives = 70/106 (66%), Gaps = 1/106 (0%) Frame = +2 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKAT 433 +++ ++D+ G E +I E + LK+P+ +E LG PKG +L GPPGTGKTL+A+A Sbjct: 185 SRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAV 244 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A ESG F+SI+G + M + G ++R +F +A + APSI+FID Sbjct: 245 ANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFID 290 Score = 91.7 bits (226), Expect = 1e-18 Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + D+ G ++ K+EI E V L P ++ LG + KG LL GPPG GKTLLAKA A Sbjct: 464 VHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVAT 523 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 ES F+SI G + + +VG +R +F++A+Q AP+IVF+D Sbjct: 524 ESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLD 567
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 99.4 bits (246), Expect = 7e-21 Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V ++D+ G + AKQE+ME V + LK P+ + K P+G LL GPPGTGKTLLAKA A Sbjct: 452 VKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVAN 511 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 ES F+S+ G + + +VG VR +F++ARQ AP ++F D Sbjct: 512 ESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFD 555 Score = 95.1 bits (235), Expect = 1e-19 Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Frame = +2 Query: 245 KNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLL 421 K + V ++D+ G + + E + LK+P+ ++ LG + PKG LL GPPGTGKTL+ Sbjct: 173 KRAVPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLI 232 Query: 422 AKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 AKA A E F+ ISG + M + G R+R +F+EA++ APSI+FID Sbjct: 233 AKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFID 282
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 99.0 bits (245), Expect = 9e-21 Identities = 50/107 (46%), Positives = 72/107 (67%), Gaps = 1/107 (0%) Frame = +2 Query: 254 KNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKA 430 K +V ++D+ G D +EI E V L P+ + E+G + PKG LL GPPGTGKTLLAKA Sbjct: 135 KPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKA 194 Query: 431 TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A ++ F+ + GS+F++ ++G G VR +FQ A++ APSI+FID Sbjct: 195 VANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFID 241
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 98.2 bits (243), Expect = 1e-20 Identities = 49/112 (43%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Frame = +2 Query: 239 MDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKT 415 M+ K + F+D+ G + ++I E V LKNP+ +E++G PKG LL GPPGTGKT Sbjct: 137 MEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196 Query: 416 LLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 LLAKA A E+ F+ + GS+ ++ F+G G VR++F+ A++ +P I+FID Sbjct: 197 LLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFID 248
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 97.8 bits (242), Expect = 2e-20 Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 1/111 (0%) Frame = +2 Query: 242 DKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 ++N+ N+V + D+ GC + +I E V L++P+ ++ +G K P+G L+ GPPGTGKTL Sbjct: 204 EENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTL 263 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +A+A A E+G F I+G + M G S +R F+EA + AP+I+FID Sbjct: 264 MARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFID 314 Score = 94.0 bits (232), Expect = 3e-19 Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + DV G DE K+E+ E V + + +P +Y + G KG L GPPGTGKTLLAKA A Sbjct: 484 VTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVAT 543 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+S+ G + + M+ G S +R++F +AR AP++VF+D Sbjct: 544 EVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLD 587
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 97.1 bits (240), Expect = 3e-20 Identities = 47/117 (40%), Positives = 74/117 (63%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 ++++ + + + V + DV G D KQE+ E V L Y ++G P+G LL GPP Sbjct: 118 SSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPP 177 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GTGKT+L KA A + F+ + GS+F++ ++G GP VR++F+ AR+ AP+I+FID Sbjct: 178 GTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFID 234
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 96.7 bits (239), Expect = 4e-20 Identities = 48/111 (43%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = +2 Query: 242 DKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 ++ S N+V + DV GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL Sbjct: 193 EEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 252 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +A+A A E+G F I+G + M G S +R F+EA + AP+I+FID Sbjct: 253 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 303 Score = 89.4 bits (220), Expect = 7e-18 Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 +V ++D+ G ++ K+E+ E V + +++P K+ + G KG L GPPG GKTLLAKA A Sbjct: 472 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 531 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+SI G + + M+ G + VR +F +ARQ AP ++F D Sbjct: 532 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD 576
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 96.7 bits (239), Expect = 4e-20 Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 + D+ G D QEI E V L +P+ YE++G + PKG +L G PGTGKTLLAKA A + Sbjct: 192 YADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANST 251 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ + GS+ ++ ++G GP VR LF+ A + +PSIVFID Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFID 293
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 96.3 bits (238), Expect = 6e-20 Identities = 47/111 (42%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = +2 Query: 242 DKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 ++ S N+V + D+ GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 253 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +A+A A E+G F I+G + M G S +R F+EA + AP+I+FID Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 304 Score = 89.4 bits (220), Expect = 7e-18 Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 +V ++D+ G ++ K+E+ E V + +++P K+ + G KG L GPPG GKTLLAKA A Sbjct: 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 532 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+SI G + + M+ G + VR +F +ARQ AP ++F D Sbjct: 533 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD 577
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 96.3 bits (238), Expect = 6e-20 Identities = 47/111 (42%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = +2 Query: 242 DKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 ++ S N+V + D+ GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL Sbjct: 193 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 252 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +A+A A E+G F I+G + M G S +R F+EA + AP+I+FID Sbjct: 253 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 303 Score = 89.4 bits (220), Expect = 7e-18 Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 +V ++D+ G ++ K+E+ E V + +++P K+ + G KG L GPPG GKTLLAKA A Sbjct: 472 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 531 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+SI G + + M+ G + VR +F +ARQ AP ++F D Sbjct: 532 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD 576
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 96.3 bits (238), Expect = 6e-20 Identities = 47/111 (42%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = +2 Query: 242 DKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 ++ S N+V + D+ GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL Sbjct: 193 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 252 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +A+A A E+G F I+G + M G S +R F+EA + AP+I+FID Sbjct: 253 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 303 Score = 88.2 bits (217), Expect = 2e-17 Identities = 42/105 (40%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 +V ++D+ G ++ K+E+ + V + +++P K+ + G KG L GPPG GKTLLAKA A Sbjct: 472 QVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 531 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+SI G + + M+ G + VR +F +ARQ AP ++F D Sbjct: 532 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD 576
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 96.3 bits (238), Expect = 6e-20 Identities = 47/111 (42%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = +2 Query: 242 DKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 ++ S N+V + D+ GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL Sbjct: 193 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 252 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +A+A A E+G F I+G + M G S +R F+EA + AP+I+FID Sbjct: 253 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFID 303 Score = 89.4 bits (220), Expect = 7e-18 Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 +V ++D+ G ++ K+E+ E V + +++P K+ + G KG L GPPG GKTLLAKA A Sbjct: 472 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 531 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+SI G + + M+ G + VR +F +ARQ AP ++F D Sbjct: 532 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFD 576
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 95.9 bits (237), Expect = 7e-20 Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 A M+ + V + D+ G D+ +E+ E V L NP+K++ +G + P G LL GPP Sbjct: 136 ARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPP 195 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GTGKT+LAKA A ++ F+ ++GS+ + F+G G VR+LF+ A Q P+I+FID Sbjct: 196 GTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFID 252
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 95.5 bits (236), Expect = 1e-19 Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 406 V M+ + + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT Sbjct: 137 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 196 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A ++ F+ ++G ++MF+G G VR+ F A++ APSI+FID Sbjct: 197 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFID 251
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 95.5 bits (236), Expect = 1e-19 Identities = 44/117 (37%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 +++ + + K + + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPP 204 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 G GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ +PSI+FID Sbjct: 205 GCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFID 261
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 95.5 bits (236), Expect = 1e-19 Identities = 47/112 (41%), Positives = 71/112 (63%), Gaps = 1/112 (0%) Frame = +2 Query: 239 MDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKT 415 M+ + V ++D+ G D+ +E+ E V +K+P +E +G P G LL GPPGTGKT Sbjct: 138 MEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKT 197 Query: 416 LLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 L+AKA A ++ F+ ++GS+ + F+G G VR+LFQ AR P++VFID Sbjct: 198 LMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFID 249
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 95.1 bits (235), Expect = 1e-19 Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 406 V M+ + + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT Sbjct: 172 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 231 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A ++ F+ ++G ++MF+G G VR+ F A++ APSI+FID Sbjct: 232 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 286
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 95.1 bits (235), Expect = 1e-19 Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 406 V M+ + + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT Sbjct: 172 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 231 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A ++ F+ ++G ++MF+G G VR+ F A++ APSI+FID Sbjct: 232 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 286
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 95.1 bits (235), Expect = 1e-19 Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 406 V M+ + + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT Sbjct: 156 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 215 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A ++ F+ ++G ++MF+G G VR+ F A++ APSI+FID Sbjct: 216 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 270
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 95.1 bits (235), Expect = 1e-19 Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 406 V M+ + + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT Sbjct: 175 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 234 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A ++ F+ ++G ++MF+G G VR+ F A++ APSI+FID Sbjct: 235 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 289
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 94.7 bits (234), Expect = 2e-19 Identities = 45/117 (38%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 +++ + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 G GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+I+FID Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFID 265
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 94.7 bits (234), Expect = 2e-19 Identities = 45/117 (38%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 +++ + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 G GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+I+FID Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFID 265
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 94.7 bits (234), Expect = 2e-19 Identities = 45/117 (38%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 +++ + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 G GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+I+FID Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFID 265
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 94.7 bits (234), Expect = 2e-19 Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 K+ + DV G EAK + E V + L P+K+ +G + P G LL GPPGTGKTL+AKA A Sbjct: 458 KITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVA 517 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E+ F+S+ G + +VG +R F++ARQ AP+++F D Sbjct: 518 NETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFD 562 Score = 92.0 bits (227), Expect = 1e-18 Identities = 42/104 (40%), Positives = 69/104 (66%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 + ++D+ G + Q + E V +K+P+ +++LG + P+G LL GPPGTGKTLLAKA A Sbjct: 186 ITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E+ F SI+G + + + G ++R +F++A+ +PSI+FID Sbjct: 246 ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFID 289
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 94.7 bits (234), Expect = 2e-19 Identities = 45/115 (39%), Positives = 75/115 (65%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ + K + D+ G ++ QE++E + + + +++E+LG + PKG LL GPPGT Sbjct: 157 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGT 216 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+A+A A ++ F+ ++G ++MF+G G VR+ FQ A++ AP I+FID Sbjct: 217 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFID 271
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 94.4 bits (233), Expect = 2e-19 Identities = 48/115 (41%), Positives = 71/115 (61%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V + D+ ++V + DV G + +I E V L++P+ ++ +G K PKG LL GPPG+ Sbjct: 194 VKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGS 253 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+A+A A E+G F I+G + M G S +R F+EA + APSI+FID Sbjct: 254 GKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFID 308 Score = 89.7 bits (221), Expect = 5e-18 Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V ++D+ G + K+E+ E V + ++ P+K+E+ G KG L GPPG GKTLLAKA A Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+S+ G + + M+ G + VR +F +ARQ AP ++F D Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 581
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 94.4 bits (233), Expect = 2e-19 Identities = 48/115 (41%), Positives = 71/115 (61%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V + D+ ++V + DV G + +I E V L++P+ ++ +G K PKG LL GPPG+ Sbjct: 193 VKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGS 252 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+A+A A E+G F I+G + M G S +R F+EA + APSI+FID Sbjct: 253 GKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFID 307 Score = 90.9 bits (224), Expect = 2e-18 Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V ++D+ G + K+E+ E V + +++P+K+E+ G KG L GPPG GKTLLAKA A Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+S+ G + + M+ G + VR +F +ARQ AP ++F D Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 580
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 94.4 bits (233), Expect = 2e-19 Identities = 46/102 (45%), Positives = 68/102 (66%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 ++ V G DE +EI E + +K+P+ +E LG PKG ++ GPPGTGKTLLA+A A + Sbjct: 155 YEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHT 214 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+D Sbjct: 215 DCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMD 256
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 94.4 bits (233), Expect = 2e-19 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 ++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A + Sbjct: 143 YEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 202 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+D Sbjct: 203 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMD 244
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 94.0 bits (232), Expect = 3e-19 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 + + D+ ++V + DV G + +I E V L++P+ ++ +G K PKG LL GPPG+ Sbjct: 194 IKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGS 253 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+A+A A E+G F I+G + M G S +R F+EA + APSI+FID Sbjct: 254 GKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFID 308 Score = 91.3 bits (225), Expect = 2e-18 Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V ++D+ G + K+E+ E V + +++P+K+E+ G KG L GPPG GKTLLAKA A Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+SI G + + M+ G + VR +F +ARQ AP ++F D Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 581
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 94.0 bits (232), Expect = 3e-19 Identities = 45/105 (42%), Positives = 68/105 (64%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 KV + D+ G ++ QE+ E + LK+P+ +E++G + PKG LL GPPG GKTL+AKA A Sbjct: 134 KVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVA 193 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ + GS+ + F+G G V LF+ A++ AP+I+FID Sbjct: 194 NHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFID 238
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 94.0 bits (232), Expect = 3e-19 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 ++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A + Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+D Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMD 249
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 94.0 bits (232), Expect = 3e-19 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 ++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A + Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+D Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMD 249
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 94.0 bits (232), Expect = 3e-19 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 ++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A + Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+D Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMD 249
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 94.0 bits (232), Expect = 3e-19 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 ++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A + Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+D Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMD 249
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 94.0 bits (232), Expect = 3e-19 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 ++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A + Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+D Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMD 249
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 94.0 bits (232), Expect = 3e-19 Identities = 44/117 (37%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 ++++ + + K V + D+ G D KQEI E V L + + Y ++G + P+G L+ GPP Sbjct: 146 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPP 205 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 G GKT+LA A A + F+ + GS+F++ ++G GP VR++F+ A++ +P+I+FID Sbjct: 206 GCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFID 262
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 93.6 bits (231), Expect = 4e-19 Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V + D+ + V + DV G + +I E V L++P+ ++ +G K PKG LL GPPG+ Sbjct: 193 VKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGS 252 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+A+A A E+G F I+G + M G S +R F+EA + APSI+FID Sbjct: 253 GKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFID 307 Score = 90.5 bits (223), Expect = 3e-18 Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + D+ G + K+E+ E V + +++P+K+E+ G KG L GPPG GKTLLAKA A Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+S+ G + + M+ G + VR +F +ARQ AP ++F D Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 580
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 93.6 bits (231), Expect = 4e-19 Identities = 44/115 (38%), Positives = 74/115 (64%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ + K + DV G D+ +E++E + +K K++++G + PKGAL+ GPPGT Sbjct: 167 VKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGT 226 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A ++ F+ ++ ++M++G G VR+ F A++ AP+I+FID Sbjct: 227 GKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFID 281
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 93.6 bits (231), Expect = 4e-19 Identities = 46/117 (39%), Positives = 75/117 (64%), Gaps = 1/117 (0%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 400 +++ + + K + D+ G D KQE+ E V L + Y+++G P+G LL GPP Sbjct: 134 SSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPP 193 Query: 401 GTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GTGKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ AR+ +P+I+FID Sbjct: 194 GTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFID 250
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 93.2 bits (230), Expect = 5e-19 Identities = 47/99 (47%), Positives = 66/99 (66%), Gaps = 1/99 (1%) Frame = +2 Query: 278 VAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 454 V G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A + Sbjct: 133 VGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 192 Query: 455 FMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+D Sbjct: 193 FIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMD 231
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 93.2 bits (230), Expect = 5e-19 Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 1/111 (0%) Frame = +2 Query: 242 DKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 D+ ++V + DV G + +I E V L++P+ ++ +G K PKG LL GPPG+GKTL Sbjct: 198 DEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +A+A A E+G F I+G + M G S +R F+EA + APSI+FID Sbjct: 258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFID 308 Score = 90.9 bits (224), Expect = 2e-18 Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V ++D+ G + K+E+ E V + +++P+K+E+ G KG L GPPG GKTLLAKA A Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+S+ G + + M+ G + VR +F +ARQ AP ++F D Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 581
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 92.8 bits (229), Expect = 6e-19 Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 +VT M K V + DV GC E +++ E V + +P+K+ +LG PKG L GPPG Sbjct: 152 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 211 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR IVF D Sbjct: 212 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 267
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 92.8 bits (229), Expect = 6e-19 Identities = 48/115 (41%), Positives = 71/115 (61%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ +V + + G DE QE+ E V L +P+++ +G + PKG LL G PGT Sbjct: 145 VAAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGT 204 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLAKA A + F+ + GS+ ++ ++G G VR +F+ AR+ APSI+FID Sbjct: 205 GKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFID 259
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 92.8 bits (229), Expect = 6e-19 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 ++ V G D+ +EI E + +K+P+ ++ LG PKG LL GPPGTGKTLLA+A A + Sbjct: 147 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 206 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+D Sbjct: 207 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 248
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 92.8 bits (229), Expect = 6e-19 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 ++ V G D+ +EI E + +K+P+ ++ LG PKG LL GPPGTGKTLLA+A A + Sbjct: 144 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 203 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+D Sbjct: 204 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 245
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 92.8 bits (229), Expect = 6e-19 Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 +VT M K V + DV GC E +++ E V + +P+K+ +LG PKG L GPPG Sbjct: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR IVF D Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 92.8 bits (229), Expect = 6e-19 Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 +VT M K V + DV GC E +++ E V + +P+K+ +LG PKG L GPPG Sbjct: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR IVF D Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 92.8 bits (229), Expect = 6e-19 Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 +VT M K V + DV GC E +++ E V + +P+K+ +LG PKG L GPPG Sbjct: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR IVF D Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 92.4 bits (228), Expect = 8e-19 Identities = 44/111 (39%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = +2 Query: 242 DKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 +++S +V + D+ GC +I E V L++P+ ++ +G K P+G L+ GPPGTGKTL Sbjct: 214 EESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTL 273 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +A+A A E+G F I+G + M G S +R F+EA + +P+I+FID Sbjct: 274 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFID 324 Score = 87.4 bits (215), Expect = 3e-17 Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V ++D+ G +E K+E+ E V + +K+ G KG L GPPGTGKTLLAKA A Sbjct: 494 VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIAN 553 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+S+ G + + M+ G S VR++F +AR AP +VF+D Sbjct: 554 ECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLD 597
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 92.0 bits (227), Expect = 1e-18 Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TV + + V + D+ G + QE+ E + LK+P+ +EE+G PKG LL GPPG Sbjct: 125 TVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPG 184 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+AKA A E F+ + GS+ + ++G G V LF+ A++ AP+I+FID Sbjct: 185 CGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFID 240
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 92.0 bits (227), Expect = 1e-18 Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TV + + V + D+ G + QE+ E + LK+P+ +EE+G PKG LL GPPG Sbjct: 125 TVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPG 184 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+AKA A E F+ + GS+ + ++G G V LF+ A++ AP+I+FID Sbjct: 185 CGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFID 240
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 92.0 bits (227), Expect = 1e-18 Identities = 43/115 (37%), Positives = 75/115 (65%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ + K + D+ G ++ QE++E + + + +++++LG + PKG LL GPPGT Sbjct: 156 VKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGT 215 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+A+A A ++ F+ ++G ++MF+G G VR+ FQ A++ +P I+FID Sbjct: 216 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 270
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 92.0 bits (227), Expect = 1e-18 Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TVT M K V + DV GC + +++ E V L +P++Y LG + PKG LL GPPG Sbjct: 162 TVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPG 221 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F D Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD 277
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 91.7 bits (226), Expect = 1e-18 Identities = 46/102 (45%), Positives = 68/102 (66%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 ++ V G ++ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A + Sbjct: 144 YEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHT 203 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+D Sbjct: 204 DCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMD 245
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 91.7 bits (226), Expect = 1e-18 Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TVT M K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F D Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD 275
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 91.7 bits (226), Expect = 1e-18 Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TVT M K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG Sbjct: 159 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 218 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F D Sbjct: 219 TGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD 274
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 91.7 bits (226), Expect = 1e-18 Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TVT M K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG Sbjct: 159 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 218 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F D Sbjct: 219 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD 274
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 91.7 bits (226), Expect = 1e-18 Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 TVT M K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG Sbjct: 159 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 218 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F D Sbjct: 219 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD 274
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 91.7 bits (226), Expect = 1e-18 Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ +V + + G DE QE+ E V L P+++ +G + PKG LL G PGT Sbjct: 145 VAAMEVIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGT 204 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLAKA A + F+ + GS+ ++ ++G G VR +F+ AR+ APSI+FID Sbjct: 205 GKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFID 259
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 91.7 bits (226), Expect = 1e-18 Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEI-MEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + D+ ++ ++E+ M + ++NP +++ LG P G LL GPPG GKTLLAKA A Sbjct: 578 VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVAN 637 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 ESG+ F+S+ G + + M+VG VR +FQ A+ AP ++F D Sbjct: 638 ESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFD 681 Score = 84.0 bits (206), Expect = 3e-16 Identities = 41/105 (39%), Positives = 63/105 (60%) Frame = +2 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 + V F+DV G D +E+ + + +++P+ Y LG P+G LL GPPG GKTLLA A A Sbjct: 260 SNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIA 319 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE +P + ++ + + G ++R LF++A AP I+FID Sbjct: 320 GELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFID 364
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 91.3 bits (225), Expect = 2e-18 Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%) Frame = +2 Query: 212 NIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEF-VHFLKNPKKYEELGAKIPKGALL 388 N+ +A++T+ + V + DV G D + + + V +K P Y+ G + G LL Sbjct: 508 NLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLL 567 Query: 389 VGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFI 568 GPPG GKTL+AKA A E+G FM I G++ + +VG +R LFQ AR CAP ++F Sbjct: 568 YGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFF 627 Query: 569 D 571 D Sbjct: 628 D 628 Score = 84.0 bits (206), Expect = 3e-16 Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 FKD G + E+ V F + NP+ ++++G K P G L GPPG GKT LA A A E+ Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GVPF IS ++ + G +R LF +A + APSIVFID Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFID 333
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 91.3 bits (225), Expect = 2e-18 Identities = 43/115 (37%), Positives = 74/115 (64%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ + K + D+ G ++ QE++E + + + ++++LG + PKG LL GPPGT Sbjct: 162 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGT 221 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+A+A A ++ F+ ++G ++MF+G G VR+ FQ A++ +P I+FID Sbjct: 222 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 276
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 90.9 bits (224), Expect = 2e-18 Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 KV++ D+ G +E K ++ E + L+ + + LG PKG LL GPPG KTL AKA A Sbjct: 512 KVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALA 571 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 ESG+ F+++ G + +VG +R +F++AR APSI+F D Sbjct: 572 TESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFD 616 Score = 73.2 bits (178), Expect = 5e-13 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 8/130 (6%) Frame = +2 Query: 206 IFNIGKATVTKMDKNSKNKVF-------FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELG 361 IF G +T + N+ + + V G D+ + + + L P + G Sbjct: 216 IFRKGSTHITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFG 275 Query: 362 AKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEAR 541 P+G LL GPPGTGKT+L + A S ++I+G + ++G + +R++F EAR Sbjct: 276 VSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEAR 335 Query: 542 QCAPSIVFID 571 + PSI+FID Sbjct: 336 KYQPSIIFID 345
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 90.9 bits (224), Expect = 2e-18 Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + D+ G + QE+ E + LK+P+ +EE+G PKG LL GPPG GKTL+AKA A Sbjct: 134 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAH 193 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+ + GS+ + ++G G V LF+ A++ AP+I+FID Sbjct: 194 EVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFID 237
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 90.9 bits (224), Expect = 2e-18 Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQE-IMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + D+ ++ + E IM + ++NP ++ LG P G LL GPPG GKTLLAKA A Sbjct: 577 VTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVAN 636 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 ESG+ F+S+ G + + M+VG VR +FQ A+ AP ++F D Sbjct: 637 ESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFD 680 Score = 84.7 bits (208), Expect = 2e-16 Identities = 42/105 (40%), Positives = 63/105 (60%) Frame = +2 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 + V F+DV G D +E+ + + +++P+ Y+ LG P+G LL GPPG GKTLLA A A Sbjct: 259 SNVKFEDVGGNDATLKEVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIA 318 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GE +P + ++ + + G ++R LF +A AP IVFID Sbjct: 319 GELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFID 363
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 90.1 bits (222), Expect = 4e-18 Identities = 43/115 (37%), Positives = 74/115 (64%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ + K + D+ G ++ QE++E + + + +++E+LG + PKG LL GPPGT Sbjct: 152 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGT 211 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+A+A A ++ F+ ++G ++MF+G G VR+ F A++ +P I+FID Sbjct: 212 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFID 266
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 89.7 bits (221), Expect = 5e-18 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 +VT M K V + DV GC + +++ E V L +P+++ LG PKG LL GPPG Sbjct: 194 SVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPG 253 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR I+F D Sbjct: 254 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFD 309
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 89.7 bits (221), Expect = 5e-18 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 1/116 (0%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 403 +VT M K V + DV GC E + + E V L +P+++ +LG PKG +L GPPG Sbjct: 164 SVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPG 223 Query: 404 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR I+F D Sbjct: 224 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFD 279
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 88.6 bits (218), Expect = 1e-17 Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 1/99 (1%) Frame = +2 Query: 278 VAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 454 V G + +EI E + +K+P+ +E LG PKG +L GPPGTGKTLLA+A A + Sbjct: 150 VGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCK 209 Query: 455 FMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+ +SG++ ++ ++G G VR LF AR+ APSI+F+D Sbjct: 210 FIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMD 248
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 88.6 bits (218), Expect = 1e-17 Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M+ + K + D+ G + +E+ E + ++ K+ +LG K PKG L+ GPPGT Sbjct: 171 VKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGT 230 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A +S F+ ++ ++MF+G G VR+ F A++ +P+I+FID Sbjct: 231 GKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFID 285
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 87.4 bits (215), Expect = 3e-17 Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 9/124 (7%) Frame = +2 Query: 227 TVTKMDKNSKNKVF------FKDVAGCDEAKQEIMEFVHFLKNPKKYEEL---GAKIPKG 379 ++ ++ K N +F + D+ G +EAK + + L+ P ++ EL G K G Sbjct: 634 SINRIRKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDT---LQLPLQFPELFSQGLKPRSG 690 Query: 380 ALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 559 LL GPPGTGKTLLAKA A E + F+SI G + + M+VG + VRN+F++AR +P + Sbjct: 691 VLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCV 750 Query: 560 VFID 571 +F D Sbjct: 751 IFFD 754
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 85.9 bits (211), Expect = 8e-17 Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 + D+ G K+E+ E V + +++P+KY + G + +G L GPPG GKTLLAKA A E Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+SI G + + M+ G + VR++F +AR AP ++F D Sbjct: 542 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFD 583 Score = 85.1 bits (209), Expect = 1e-16 Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 1/111 (0%) Frame = +2 Query: 242 DKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 ++ S N + + D+ G + +I E V L++P+ ++ +G K P+G LL GPPGTGKTL Sbjct: 200 EEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTL 259 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +A+A A E+G F I+G + M G S +R F+E + P+I+FID Sbjct: 260 IARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFID 310
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 85.9 bits (211), Expect = 8e-17 Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 445 + D+ G K+E+ E V + +++P+KY + G + +G L GPPG GKTLLAKA A E Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 540 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F+SI G + + M+ G + VR++F +AR AP ++F D Sbjct: 541 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFD 582 Score = 85.9 bits (211), Expect = 8e-17 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 1/111 (0%) Frame = +2 Query: 242 DKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTL 418 ++ + N+V + D+ G + +I E V L++P+ ++ +G K P+G LL GPPGTGKTL Sbjct: 199 EEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTL 258 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +A+A A E+G F I+G + M G S +R F E + +P+I+FID Sbjct: 259 IARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFID 309
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 84.7 bits (208), Expect = 2e-16 Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M + F V G +E +E+ E + LKNP+ + +G K PKG LL GPPGT Sbjct: 118 VYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGT 177 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A GV F+ + S ++ ++G +R +F A++ P ++F+D Sbjct: 178 GKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMD 232
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 84.3 bits (207), Expect = 2e-16 Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V ++DV G D K EI++ + LK+P+ + + G K G L GPPGTGKTLLAKA A Sbjct: 810 VKWEDVGGLDVVKDEILDTIEMPLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKAIAT 868 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + F S+ G + + M++G + VR +FQ+AR P ++F D Sbjct: 869 NFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFD 912
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 84.3 bits (207), Expect = 2e-16 Identities = 47/101 (46%), Positives = 61/101 (60%) Frame = +2 Query: 269 FKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESG 448 F D+ G + E+ E V FL+N + +P G LL GPPGTGKTLL +A AGE+ Sbjct: 973 FTDIVGIQKVLLELYEIVLFLRNSGRNFTHSETLPHGILLTGPPGTGKTLLVQALAGEAQ 1032 Query: 449 VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 VP + +SGS ME +++ +FQEARQ AP IVFID Sbjct: 1033 VPVIVLSGSSLMEPGESAA-FKLQLVFQEARQLAPCIVFID 1072
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 84.0 bits (206), Expect = 3e-16 Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + D+ G D K EIM+ + LK+P+ + G K G L GPPGTGKTLLAKA A Sbjct: 699 VTWDDIGGMDVVKGEIMDTIDMPLKHPELFSS-GMKKRSGILFYGPPGTGKTLLAKAIAS 757 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + F S+ G + + M++G + VR +FQ+AR P ++F D Sbjct: 758 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFD 801
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 84.0 bits (206), Expect = 3e-16 Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V ++D+ G D K EIM+ + LK+P+ + G K G L GPPGTGKTLLAKA A Sbjct: 836 VKWEDIGGLDLVKDEIMDTIDMPLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKAIAT 894 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + F S+ G + + M++G + VR +FQ+AR P ++F D Sbjct: 895 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFD 938
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 84.0 bits (206), Expect = 3e-16 Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V KM + + DV G E +E+ E V L NP+ ++ +G PKG LL GPPGT Sbjct: 136 VYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGT 195 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A + F+ + S ++ ++G +R +F AR P IVF+D Sbjct: 196 GKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMD 250
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 84.0 bits (206), Expect = 3e-16 Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M + ++ F + G E +E+ E + LKNP+ ++ +G K PKG LL GPPGT Sbjct: 167 VYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGT 226 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLAKA A G F+ S ++ ++G +R +F A++ P I+F+D Sbjct: 227 GKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMD 281
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 83.6 bits (205), Expect = 4e-16 Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 3/106 (2%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL---GAKIPKGALLVGPPGTGKTLLAKAT 433 VF++D+ G + K EI++ + P K+ EL G K G L GPPGTGKTLLAKA Sbjct: 720 VFWEDIGGLEMVKGEILDTIDM---PLKFPELFASGMKKRSGILFYGPPGTGKTLLAKAV 776 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A + F S+ G + + M++G + VR +FQ AR P ++F D Sbjct: 777 ATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFD 822
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 83.6 bits (205), Expect = 4e-16 Identities = 45/103 (43%), Positives = 59/103 (57%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 442 V + DV G E K+EI+E + + LG + G LL GPPGTGKTLLAKA A E Sbjct: 702 VSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATE 760 Query: 443 SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + F+S+ G + + M+VG VR +F AR AP I+F D Sbjct: 761 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFD 803 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/62 (29%), Positives = 32/62 (51%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 562 LL GPPG GKT + A G+ + + S G ++++ +F AR+C P+++ Sbjct: 467 LLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVL 526 Query: 563 FI 568 + Sbjct: 527 LL 528
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 82.8 bits (203), Expect = 6e-16 Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 3/106 (2%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL---GAKIPKGALLVGPPGTGKTLLAKAT 433 V ++DV G D K EI++ + P K+ EL G K G L GPPGTGKTLLAKA Sbjct: 816 VKWEDVGGLDVVKDEILDTIDM---PMKHPELFSNGIKKRSGILFYGPPGTGKTLLAKAI 872 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A + F S+ G + + M++G + VR +FQ AR P +VF D Sbjct: 873 ATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVVFFD 918
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 82.8 bits (203), Expect = 6e-16 Identities = 51/106 (48%), Positives = 61/106 (57%), Gaps = 3/106 (2%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL--GAKIP-KGALLVGPPGTGKTLLAKAT 433 V F D+AG D AKQ + E V P EL G + P +G LL GPPG GKT+LAKA Sbjct: 339 VKFDDIAGQDLAKQALQEIVIL---PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAV 395 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A ES F +IS + +VG G VR LF AR+ PSI+FID Sbjct: 396 AAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID 441
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 82.8 bits (203), Expect = 6e-16 Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 1/107 (0%) Frame = +2 Query: 254 KNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKA 430 K V + D+AG + AK+ + E V +K P+ + G K G LL GPPGTGK+ LAKA Sbjct: 123 KPNVRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKA 181 Query: 431 TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A E+G F SIS SD + ++G VR LF+ AR+ PSI+FID Sbjct: 182 VATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFID 228
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 82.4 bits (202), Expect = 8e-16 Identities = 44/103 (42%), Positives = 59/103 (57%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 442 V + DV G + K+EI+E + + LG + G LL GPPGTGKTLLAKA A E Sbjct: 703 VSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATE 761 Query: 443 SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + F+S+ G + + M+VG VR +F AR AP I+F D Sbjct: 762 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFD 804 Score = 36.6 bits (83), Expect = 0.053 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 562 LL GPPG+GKT A G+ + + S ++++ F AR+C P+++ Sbjct: 468 LLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAVL 527 Query: 563 FI 568 + Sbjct: 528 LL 529
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 82.4 bits (202), Expect = 8e-16 Identities = 44/103 (42%), Positives = 59/103 (57%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 442 V + DV G + K+EI+E + + LG + G LL GPPGTGKTLLAKA A E Sbjct: 700 VSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATE 758 Query: 443 SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + F+S+ G + + M+VG VR +F AR AP I+F D Sbjct: 759 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFD 801 Score = 36.2 bits (82), Expect = 0.069 Identities = 17/62 (27%), Positives = 29/62 (46%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 562 LL GPPG+GKT A G+ + + S ++++ F AR+C P ++ Sbjct: 467 LLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVL 526 Query: 563 FI 568 + Sbjct: 527 LL 528
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 81.6 bits (200), Expect = 1e-15 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + D+ G +E K+++ E + + L+ Y + + KG LL GPPG GKTLLAKA A Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F+S+ G + + M+ G + VR+LF +AR +P I+F D Sbjct: 991 ECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFD 1034 Score = 73.9 bits (180), Expect = 3e-13 Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 1/110 (0%) Frame = +2 Query: 245 KNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLL 421 + + + + ++D+ G + +I E + LK P+ + +G PKG L+ G PGTGKT + Sbjct: 518 EENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSI 577 Query: 422 AKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 AKA A ES I+G + M +G ++R +F++A + P I+FID Sbjct: 578 AKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFID 627
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 81.3 bits (199), Expect = 2e-15 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGT Sbjct: 119 VYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGT 178 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A + F+ + S ++ ++G +R +F AR P I+F+D Sbjct: 179 GKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 81.3 bits (199), Expect = 2e-15 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGT Sbjct: 119 VYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGT 178 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A + F+ + S ++ ++G +R +F AR P I+F+D Sbjct: 179 GKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 81.3 bits (199), Expect = 2e-15 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 1/115 (0%) Frame = +2 Query: 230 VTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 406 V M V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGT Sbjct: 119 VYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGT 178 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTLLA+A A + F+ + S ++ ++G +R +F AR P I+F+D Sbjct: 179 GKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 81.3 bits (199), Expect = 2e-15 Identities = 50/106 (47%), Positives = 61/106 (57%), Gaps = 3/106 (2%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL--GAKIP-KGALLVGPPGTGKTLLAKAT 433 V F D+AG + AKQ + E V P EL G + P +G LL GPPG GKT+LAKA Sbjct: 337 VKFDDIAGQELAKQALQEIVIL---PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAV 393 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A ES F +IS + +VG G VR LF AR+ PSI+FID Sbjct: 394 AAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID 439
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 81.3 bits (199), Expect = 2e-15 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + D+ G D K EI++ + LK+P+ + G K G L GPPGTGKTL+AKA A Sbjct: 729 VTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIAT 787 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + F S+ G + + M++G + VR +FQ+AR+ P ++F D Sbjct: 788 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFD 831
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 81.3 bits (199), Expect = 2e-15 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEI-MEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + +V + E+ M V +K P+ YE++G P G LL GPPG GKTLLAKA A Sbjct: 530 VTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVAN 589 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 ES F+SI G + + +VG +R +F AR P ++F D Sbjct: 590 ESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFD 633 Score = 80.9 bits (198), Expect = 2e-15 Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 1/113 (0%) Frame = +2 Query: 236 KMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 412 K D++ N K + G D+ ++ME + + +P+ + G + P+G LL GPPG GK Sbjct: 194 KEDRSPPNSSL-KSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGK 252 Query: 413 TLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 T +A A AGE VPF+SIS + G ++R+LF EAR AP +VF D Sbjct: 253 TSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFD 305
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 80.9 bits (198), Expect = 2e-15 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 KV+++D+AG AK + E V + P ++ L + +G LL GPPGTGKT++AKA A Sbjct: 467 KVYWEDIAGLRNAKNSLKEAVVYPFLRPDLFKGLREPV-RGMLLFGPPGTGKTMIAKAVA 525 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 ES F S+S S + ++G VR LF A++ +PSI+FID Sbjct: 526 TESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFID 570
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 80.9 bits (198), Expect = 2e-15 Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + DV G K IME + LK+P+ + G K G L GPPGTGKTLLAKA A Sbjct: 715 VTWDDVGGLSSVKDAIMETIDLPLKHPELFGS-GLKKRSGILFYGPPGTGKTLLAKAIAT 773 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + F S+ G + + M++G + VR +FQ+AR P ++F D Sbjct: 774 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFD 817
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 79.7 bits (195), Expect = 5e-15 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + DV G + K + E + L+ P+ + + G K G L GPPGTGKTLLAKA A Sbjct: 991 VTWDDVGGLNNVKDAVTETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIAT 1049 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E + F S+ G + + M++G + VR +FQ AR P +VF D Sbjct: 1050 EYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFD 1093
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 79.7 bits (195), Expect = 5e-15 Identities = 43/115 (37%), Positives = 64/115 (55%) Frame = +2 Query: 227 TVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGT 406 T K+ + K F ++ G +EAK++ + +L+NPK + E PK L GPPGT Sbjct: 109 TPKKVLRTQFKKAKFSEIIGQEEAKKKCRIIMKYLENPKLFGEWA---PKNVLFYGPPGT 165 Query: 407 GKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GKTL+A+A A E+ F+ + + + VG +R L+Q A + AP IVFID Sbjct: 166 GKTLMARALATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIVFID 220
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 79.3 bits (194), Expect = 7e-15 Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + DV G K I E + L+ P+ + + G K G L GPPGTGKTLLAKA A Sbjct: 988 VTWDDVGGLGNVKDAITETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIAT 1046 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E + F S+ G + + M++G + VR +FQ AR P +VF D Sbjct: 1047 EYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFD 1090
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 79.0 bits (193), Expect = 9e-15 Identities = 44/120 (36%), Positives = 66/120 (55%) Frame = +2 Query: 212 NIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLV 391 NI ++ + K + F+D+ G + KQE+ V FL K Y P G L Sbjct: 329 NIHDIEISTIQKFVAKAITFRDIGGMESLKQELAT-VAFLLKQKNYSN---SYPMGYLFA 384 Query: 392 GPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GPPGTGKTL+AKA + E+ P++ + GS F GV +RV +LF++ + +P I++ID Sbjct: 385 GPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYID 444
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 79.0 bits (193), Expect = 9e-15 Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + DV G + K++I++ + LK P + + G K G L GPPGTGKTLLAKA A Sbjct: 716 VGWDDVGGMEGVKKDILDTIETPLKYPHWFSD-GVKKRSGILFYGPPGTGKTLLAKAIAT 774 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + F S+ G + + M++G + VR +FQ+AR P +VF D Sbjct: 775 TFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFD 818
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 79.0 bits (193), Expect = 9e-15 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V + DV G K ++E + L+ P+ + + G K G L GPPGTGKTLLAKA A Sbjct: 1027 VGWDDVGGLTNVKDALVETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIAT 1085 Query: 440 ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E + F S+ G + + M++G + VR +FQ AR P +VF D Sbjct: 1086 EFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFD 1129
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 79.0 bits (193), Expect = 9e-15 Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 1/105 (0%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 436 KV + DV G + K+++ + V + +K+ + ++G +G LL GPPG KT LAKA A Sbjct: 282 KVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAA 341 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + F S+S ++ M+VG G + +RN FQ AR +PSI+F D Sbjct: 342 NAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFD 386 Score = 58.2 bits (139), Expect = 2e-08 Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 5/104 (4%) Frame = +2 Query: 275 DVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGV 451 ++ G + A Q + E + F + P + LG K P+G LL GPPGTGKT L +A E Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82 Query: 452 PFMSISGSDFMEMFVGVGPSRVRNLFQEARQCA----PSIVFID 571 + +S G +R F EA A PS++FID Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFID 126
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 78.6 bits (192), Expect = 1e-14 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 4/110 (3%) Frame = +2 Query: 254 KNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL--GAKIP-KGALLVGPPGTGKTLLA 424 K + + DVAG + AK+ + E V P K+ L G + P +G LL GPPGTGK+ LA Sbjct: 121 KPNIRWNDVAGLEGAKEALKEAVIL---PIKFPHLFTGKRTPWRGILLFGPPGTGKSYLA 177 Query: 425 KATAGESG-VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 KA A E+ F S+S SD M ++G V+NLF+ ARQ PSI+FID Sbjct: 178 KAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFID 227
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 78.6 bits (192), Expect = 1e-14 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 4/110 (3%) Frame = +2 Query: 254 KNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL--GAKIP-KGALLVGPPGTGKTLLA 424 K + + DVAG + AK+ + E V P K+ L G + P +G LL GPPGTGK+ LA Sbjct: 121 KPNIRWNDVAGLEGAKEALKEAVIL---PIKFPHLFTGKRTPWRGILLFGPPGTGKSYLA 177 Query: 425 KATAGESG-VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 KA A E+ F S+S SD M ++G V+NLF+ ARQ PSI+FID Sbjct: 178 KAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFID 227
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 77.4 bits (189), Expect = 3e-14 Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 3/111 (2%) Frame = +2 Query: 248 NSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL---GAKIPKGALLVGPPGTGKTL 418 + K V ++DVAG + AK+ + E V P K+ L K G LL GPPGTGK+ Sbjct: 125 SEKPNVKWEDVAGLEGAKEALKEAVIL---PVKFPHLFKGNRKPTSGILLYGPPGTGKSY 181 Query: 419 LAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 LAKA A E+ F S+S SD + ++G V+ LF AR+ PSI+FID Sbjct: 182 LAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFID 232
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 76.6 bits (187), Expect = 5e-14 Identities = 50/107 (46%), Positives = 65/107 (60%), Gaps = 4/107 (3%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL--GAKIP-KGALLVGPPGTGKTLLAKAT 433 V + DVAG + AK+ + E V P K+ L G + P +G LL GPPGTGK+ LAKA Sbjct: 131 VKWSDVAGLEGAKEALKEAVIL---PIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV 187 Query: 434 AGESG-VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A E+ F SIS SD + ++G V+NLFQ AR+ PSI+FID Sbjct: 188 ATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFID 234
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 76.6 bits (187), Expect = 5e-14 Identities = 50/107 (46%), Positives = 65/107 (60%), Gaps = 4/107 (3%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL--GAKIP-KGALLVGPPGTGKTLLAKAT 433 V + DVAG + AK+ + E V P K+ L G + P +G LL GPPGTGK+ LAKA Sbjct: 131 VKWSDVAGLEGAKEALKEAVIL---PIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV 187 Query: 434 AGESG-VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A E+ F SIS SD + ++G V+NLFQ AR+ PSI+FID Sbjct: 188 ATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFID 234
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 75.5 bits (184), Expect = 1e-13 Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 1/106 (0%) Frame = +2 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKAT 433 ++V + D+AG + AK + E V + P + L + +G LL GPPGTGKT+LA+A Sbjct: 600 DEVHWDDIAGLESAKYSLKEAVVYPFLRPDLFRGLREPV-RGMLLFGPPGTGKTMLARAV 658 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A ES F SIS S ++G VR LF A++ +PSI+F+D Sbjct: 659 ATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVD 704
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 74.7 bits (182), Expect = 2e-13 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 2/105 (1%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIP-KGALLVGPPGTGKTLLAKATA 436 V + D+AG EAK+ + E V L P ++ G + P KG L+VGPPGTGKT+LAKA A Sbjct: 231 VHWADIAGLTEAKRLLEEAVVLPLWMPDYFK--GIRRPWKGVLMVGPPGTGKTMLAKAVA 288 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E G F ++S + + G VR LF+ AR APS +FID Sbjct: 289 TECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFID 333
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 74.7 bits (182), Expect = 2e-13 Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 4/120 (3%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIP----KGALLV 391 A++ ++ + + + + G E +Q +M+ + P KY EL A +P G LL Sbjct: 824 ASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQL---PAKYPELFANLPIRQRTGILLY 880 Query: 392 GPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 GPPGTGKTLLA A ES + F+S+ G + + ++G VR++F A+ P I+F D Sbjct: 881 GPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFD 940
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 73.2 bits (178), Expect = 5e-13 Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 2/113 (1%) Frame = +2 Query: 239 MDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIP-KGALLVGPPGTGK 412 M N++N + D+ G + KQ + E V L P+ ++ G + P K +L GPPGTGK Sbjct: 182 MATNTENTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGK 239 Query: 413 TLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TL+A+A A ES F ++S +D + G VR LF+ AR APSI+FID Sbjct: 240 TLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFID 292
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 73.2 bits (178), Expect = 5e-13 Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 2/105 (1%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIP-KGALLVGPPGTGKTLLAKATA 436 V + DVAG EAK+ + E V L P+ ++ G + P KG L+ GPPGTGKTLLAKA A Sbjct: 236 VRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTLLAKAVA 293 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E G F ++S + + G VR LF AR APS +FID Sbjct: 294 TECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFID 338
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 72.8 bits (177), Expect = 7e-13 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 4/113 (3%) Frame = +2 Query: 245 KNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIP----KGALLVGPPGTGK 412 K K+ V + D+ G +AK ++E + + P KY + + P G LL G PG GK Sbjct: 790 KLQKSDVRWDDIGGLRDAKSILLETLEW---PTKYAPIFSSCPLRLRSGILLYGYPGCGK 846 Query: 413 TLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TLLA A A + G+ F+SI G + + ++G VR LF+ A+ P I+F D Sbjct: 847 TLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFD 899
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 72.4 bits (176), Expect = 9e-13 Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 6/109 (5%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 439 V F D+ G D ++ E V L P+ Y+ P+G L GPPGTGKTL+A+A A Sbjct: 410 VNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAA 469 Query: 440 -----ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E + F G+D + +VG ++R LF+EA++ PSI+F D Sbjct: 470 SCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFD 518
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 71.6 bits (174), Expect = 1e-12 Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 2/105 (1%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIP-KGALLVGPPGTGKTLLAKATA 436 + + D+A +EAK+ + E V + P ++ G + P KG L+VGPPGTGKT+LAKA A Sbjct: 205 IHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAKAVA 262 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E G F ++S S + G VR LF+ AR AP+ +FID Sbjct: 263 TECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 307
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 71.6 bits (174), Expect = 1e-12 Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 3/107 (2%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKI---PKGALLVGPPGTGKTLLAKA 430 KV ++DVAG DE E+ + V L K++ G+K+ PKG LL GPPG GKTL+AKA Sbjct: 90 KVTWRDVAGLDEIISEMQDTV-ILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKA 148 Query: 431 TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TA SG F+++ S + + G +F A + P I+F+D Sbjct: 149 TAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLD 195
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 71.6 bits (174), Expect = 1e-12 Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 2/105 (1%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIP-KGALLVGPPGTGKTLLAKATA 436 + + D+A +EAK+ + E V + P ++ G + P KG L+VGPPGTGKT+LAKA A Sbjct: 203 IHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAKAVA 260 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E G F ++S S + G VR LF+ AR AP+ +FID Sbjct: 261 TECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 305
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 71.6 bits (174), Expect = 1e-12 Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 2/105 (1%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIP-KGALLVGPPGTGKTLLAKATA 436 + + D+A +EAK+ + E V + P ++ G + P KG L+VGPPGTGKT+LAKA A Sbjct: 203 IHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAKAVA 260 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E G F ++S S + G VR LF+ AR AP+ +FID Sbjct: 261 TECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 305
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 69.7 bits (169), Expect = 6e-12 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 4/103 (3%) Frame = +2 Query: 275 DVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIP----KGALLVGPPGTGKTLLAKATAGE 442 D+ AK ++E + + P KYE + P G LL G PG GKTLLA A A + Sbjct: 698 DIGALANAKDVLLETLEW---PTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVAQQ 754 Query: 443 SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 G+ F+S+ G + + F+G +R LF+ A+ P I+F D Sbjct: 755 CGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFD 797
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 69.7 bits (169), Expect = 6e-12 Identities = 36/106 (33%), Positives = 60/106 (56%) Frame = +2 Query: 254 KNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKAT 433 K+ + DV G ++AK + + +L++P ++ + P+ L G PGTGKT+LAK+ Sbjct: 121 KSDITMDDVIGQEDAKIKCRIIMRYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAKSL 177 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A E VP I + + VG G ++ L++ A + APS++FID Sbjct: 178 ANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFID 223
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 69.7 bits (169), Expect = 6e-12 Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 3/107 (2%) Frame = +2 Query: 260 KVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKI---PKGALLVGPPGTGKTLLAKA 430 ++ + D+AG DE E+ + V L K++ G+++ PKG LL GPPG GKTL+AKA Sbjct: 91 QITWHDIAGLDEVITELKDTV-ILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKA 149 Query: 431 TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 TA E+G F+++ S + + G +F A + PSI+FID Sbjct: 150 TAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFID 196
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 69.7 bits (169), Expect = 6e-12 Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 2/101 (1%) Frame = +2 Query: 275 DVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIP-KGALLVGPPGTGKTLLAKATAGESG 448 D+A +EAK+ + E V + P+ ++ G + P KG L+VGPPGTGKTLLAKA A E Sbjct: 207 DIADLEEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECK 264 Query: 449 VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F +IS S + G VR LF+ AR AP+ +FID Sbjct: 265 TTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFID 305
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 69.3 bits (168), Expect = 7e-12 Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 2/105 (1%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGA-KIPKGALLVGPPGTGKTLLAKATA 436 + F+D+ G D ++ E V + L P+ Y + P G LL GPPG GKT+LAKA A Sbjct: 88 ITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALA 147 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 ESG F+SI S M+ + G V +F A + P I+FID Sbjct: 148 KESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFID 192
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 69.3 bits (168), Expect = 7e-12 Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 6/111 (5%) Frame = +2 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKAT 433 + V F V G + E V F L P+ +E+ + P+G L GPPGTGKTL+A+A Sbjct: 252 SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARAL 311 Query: 434 A-----GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A G+ V F G+D + +VG ++R LF +A Q PSI+F D Sbjct: 312 ANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFD 362
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 69.3 bits (168), Expect = 7e-12 Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 6/111 (5%) Frame = +2 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKAT 433 + V F V G + E V F L P+ +E+ + P+G L GPPGTGKTL+A+A Sbjct: 421 SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARAL 480 Query: 434 A-----GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A G+ V F G+D + +VG ++R LF +A Q PSI+F D Sbjct: 481 ANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFD 531
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 68.6 bits (166), Expect = 1e-11 Identities = 35/106 (33%), Positives = 60/106 (56%) Frame = +2 Query: 254 KNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKAT 433 ++ + DV G ++AK + + +L++P ++ + P+ L G PGTGKT+LAK+ Sbjct: 121 RSSITMDDVIGQEDAKIKCRIIMKYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAKSL 177 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A E VP I + + VG G ++ L++ A + APS++FID Sbjct: 178 ANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFID 223
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 67.8 bits (164), Expect = 2e-11 Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 6/109 (5%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA- 436 V F V G + E V F L P+ +E+ + P+G L GPPGTGKTL+A+A A Sbjct: 78 VRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALAN 137 Query: 437 ----GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 G+ V F G+D + +VG ++R LF +A Q P+I+F D Sbjct: 138 ECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFD 186
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 67.0 bits (162), Expect = 4e-11 Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 6/111 (5%) Frame = +2 Query: 257 NKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKAT 433 + V F V G Q + E V F + P+ +E+ PKG + GPPGTGKTL+A+A Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445 Query: 434 A-----GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A G + V F G+D + +VG ++R LF +A PSI+F D Sbjct: 446 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFD 496
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 66.6 bits (161), Expect = 5e-11 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 3/106 (2%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKI---PKGALLVGPPGTGKTLLAKAT 433 V + D+AG D+ ++ + V L KK+ +++ PKG LL GPPG GKTL+AKAT Sbjct: 88 VTWSDIAGLDDVITDLKDTV-ILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKAT 146 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A E+G F+++ S + + G +F A + PSI+FID Sbjct: 147 AKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFID 192
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 66.6 bits (161), Expect = 5e-11 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 3/106 (2%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKI---PKGALLVGPPGTGKTLLAKAT 433 V + D+AG D+ ++ + V L KK+ +++ PKG LL GPPG GKTL+AKAT Sbjct: 88 VTWSDIAGLDDVITDLKDTV-ILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKAT 146 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A E+G F+++ S + + G +F A + PSI+FID Sbjct: 147 AKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFID 192
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 66.6 bits (161), Expect = 5e-11 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 3/106 (2%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKI---PKGALLVGPPGTGKTLLAKAT 433 V + D+AG D+ ++ + V L KK+ +++ PKG LL GPPG GKTL+AKAT Sbjct: 88 VTWSDIAGLDDVITDLKDTV-ILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKAT 146 Query: 434 AGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 A E+G F+++ S + + G +F A + PSI+FID Sbjct: 147 AKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFID 192
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 66.6 bits (161), Expect = 5e-11 Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 2/101 (1%) Frame = +2 Query: 275 DVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIP-KGALLVGPPGTGKTLLAKATAGESG 448 D+A EAK+ + E V + P+ ++ G + P KG L+VGPPGTGKTLLAKA A E Sbjct: 210 DIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECK 267 Query: 449 VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F ++S S + G VR LF+ AR +P+ +FID Sbjct: 268 TTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFID 308
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 66.6 bits (161), Expect = 5e-11 Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 2/101 (1%) Frame = +2 Query: 275 DVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIP-KGALLVGPPGTGKTLLAKATAGESG 448 D+A EAK+ + E V + P+ ++ G + P KG L+VGPPGTGKTLLAKA A E Sbjct: 210 DIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECK 267 Query: 449 VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 F ++S S + G VR LF+ AR +P+ +FID Sbjct: 268 TTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFID 308
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 66.6 bits (161), Expect = 5e-11 Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 2/105 (1%) Frame = +2 Query: 263 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIP-KGALLVGPPGTGKTLLAKATA 436 V + D+A EAK+ + E V + P+ ++ G + P KG L+VGPPGTGKTLLAKA A Sbjct: 206 VRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVA 263 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 E F ++S S + G VR LF+ AR +P+ +FID Sbjct: 264 TECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFID 308
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 64.7 bits (156), Expect = 2e-10 Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 20/139 (14%) Frame = +2 Query: 215 IGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLV 391 I KA V + V + D+ G ++I + V + + Y E + PKG LL Sbjct: 233 IPKAEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLY 292 Query: 392 GPPGTGKTLLAKATAG---------------ESGVPFMSISGSDFMEMFVGVGPSRVRNL 526 GPPG GKTL+AKA A E+ F++I G + + FVG +R + Sbjct: 293 GPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLI 352 Query: 527 FQEARQCA----PSIVFID 571 FQ AR+ A P IVF D Sbjct: 353 FQRAREKASEGTPVIVFFD 371
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 64.7 bits (156), Expect = 2e-10 Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 20/139 (14%) Frame = +2 Query: 215 IGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLV 391 I KA V + V + D+ G ++I + V + + Y E + PKG LL Sbjct: 233 IPKAEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLY 292 Query: 392 GPPGTGKTLLAKATAG---------------ESGVPFMSISGSDFMEMFVGVGPSRVRNL 526 GPPG GKTL+AKA A E+ F++I G + + FVG +R + Sbjct: 293 GPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLI 352 Query: 527 FQEARQCA----PSIVFID 571 FQ AR+ A P IVF D Sbjct: 353 FQRAREKASEGTPVIVFFD 371
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 64.7 bits (156), Expect = 2e-10 Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 20/139 (14%) Frame = +2 Query: 215 IGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLV 391 + KA V + V ++D+ G ++I + V + + Y E + PKG LL Sbjct: 233 VPKAEVEDLVLEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHKELYREYALRPPKGVLLY 292 Query: 392 GPPGTGKTLLAKATAG---------------ESGVPFMSISGSDFMEMFVGVGPSRVRNL 526 GPPG GKTL+AKA A E+ F++I G + + FVG +R + Sbjct: 293 GPPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHIRLI 352 Query: 527 FQEARQCA----PSIVFID 571 FQ AR+ A P IVF D Sbjct: 353 FQRAREKASEGTPVIVFFD 371
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 61.2 bits (147), Expect = 2e-09 Identities = 36/99 (36%), Positives = 51/99 (51%) Frame = +2 Query: 275 DVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 454 D+ G +E K + K+ EE G IPKG LLVG GTGK+L AK+ A E +P Sbjct: 245 DIGGLNELKSWLK--FRAASFSKRAEEYGLPIPKGLLLVGIQGTGKSLTAKSIANEWNLP 302 Query: 455 FMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 + + +G +RVR + Q A +P I++ID Sbjct: 303 LLKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWID 341
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 59.7 bits (143), Expect = 6e-09 Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 4/103 (3%) Frame = +2 Query: 275 DVAGCDEAKQEIMEFVHFLKNPKKY-EELGAKI---PKGALLVGPPGTGKTLLAKATAGE 442 ++ GC+E E+ + + P ++ + G+ + P+G LL GPPG GKTLLAKA A Sbjct: 84 EIGGCEELVAELKDRIIL---PLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARA 140 Query: 443 SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +G F+++ S+ + + G +F A++ P+I+FID Sbjct: 141 AGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFID 183
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 53.5 bits (127), Expect = 4e-07 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%) Frame = +2 Query: 338 PKKYEELGAKIPKGALLVGPPGTGKTLLAK--ATAGESGVPFMSISGSDFMEMFVGVGPS 511 P+ E+LG K KG LL GPPGTGKTL+A+ T + P + ++G ++ +VG + Sbjct: 242 PELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEA 300 Query: 512 RVRNLFQEARQ 544 VR LF EA + Sbjct: 301 NVRRLFAEAEE 311 Score = 32.0 bits (71), Expect = 1.3 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%) Frame = +2 Query: 362 AKIPKGA-----LLVGPPGTGKTLLAKATAGESGVPFMSI-SGSDFMEMFVGVGPSRVRN 523 AK P+ + L+ G P +GKT LA A S PF+ + S D + +R Sbjct: 528 AKAPESSGLVSVLVAGAPNSGKTALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRK 587 Query: 524 LFQEARQCAPSIVFID 571 +F +A + S + +D Sbjct: 588 IFDDAYRSMLSCIVVD 603
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 53.1 bits (126), Expect = 5e-07 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 19/132 (14%) Frame = +2 Query: 206 IFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEI------MEFVHFLKN--------PK 343 +F+ + ++ + SK K ++ + D Q++ EF H + P+ Sbjct: 261 VFDKEEGSMLNLIGKSKGKSAYRSIINPDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPE 320 Query: 344 KYEELGAKIPKGALLVGPPGTGKTLLAK-----ATAGESGVPFMSISGSDFMEMFVGVGP 508 E+LG K +G LL GPPGTGKTL+A+ A E + ++G ++ +VG Sbjct: 321 FIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKI----VNGPQILDKYVGESE 376 Query: 509 SRVRNLFQEARQ 544 S VR LF +A + Sbjct: 377 SNVRKLFADAEE 388 Score = 30.4 bits (67), Expect = 3.8 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMS-ISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 559 +L G TGKT LA A S PF+ IS D + ++ F++A++ S+ Sbjct: 617 VLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFEDAKRSKLSV 676 Query: 560 VFID 571 + ID Sbjct: 677 LLID 680
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 53.1 bits (126), Expect = 5e-07 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 3/90 (3%) Frame = +2 Query: 278 VAGCDEAKQEIME--FVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLA-KATAGESG 448 + G D Q+I F + P+ E+L K KG LL GPPGTGKTL+A K + +G Sbjct: 277 IGGLDAEFQDIFRRAFNSRILPPELAEKLDYKHCKGLLLYGPPGTGKTLIARKLSKMLNG 336 Query: 449 VPFMSISGSDFMEMFVGVGPSRVRNLFQEA 538 ++G + + +VG +RNLF++A Sbjct: 337 KEPKIVNGPEMLSKYVGASEENIRNLFKDA 366 Score = 38.9 bits (89), Expect = 0.011 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Frame = +2 Query: 374 KGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSR----VRNLFQEAR 541 + LL GPPG GKT +A A S PF+ + + E VG+G R + N+F++ Sbjct: 594 RSILLYGPPGVGKTSIATTLALNSDFPFIKMLSA---ETLVGMGELRKIQEIDNVFRDVH 650 Query: 542 QCAPSIVFID 571 + +++ ID Sbjct: 651 KSPLNVLVID 660
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 52.8 bits (125), Expect = 7e-07 Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 2/71 (2%) Frame = +2 Query: 338 PKKYEELGAKIPKGALLVGPPGTGKTLLAK--ATAGESGVPFMSISGSDFMEMFVGVGPS 511 P+ E+LG K KG LL GPPGTGKTL+A+ T + P + ++G ++ +VG + Sbjct: 247 PELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEA 305 Query: 512 RVRNLFQEARQ 544 +R LF EA + Sbjct: 306 NIRRLFAEAEE 316 Score = 30.0 bits (66), Expect = 4.9 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPS-RVRNLFQEARQCAPSI 559 L+ G P +GK+ LA A S PF+ + + M F +R +F +A + S Sbjct: 545 LIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDMVGFTESAKCLHIRKIFDDAYRSTLSC 604 Query: 560 VFID 571 + +D Sbjct: 605 IVVD 608
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 51.6 bits (122), Expect = 2e-06 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Frame = +2 Query: 278 VAGCDEAKQEIME--FVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK--ATAGES 445 V G D+ +I F + P E+LG KG LL GPPGTGKTL+A+ T + Sbjct: 241 VGGLDKEFTKIFRRAFASRIFPPSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNA 300 Query: 446 GVPFMSISGSDFMEMFVGVGPSRVRNLFQEA 538 P + ++G + + +VG +RNLF++A Sbjct: 301 KEPKI-VNGPEILSKYVGSSEENIRNLFKDA 330 Score = 36.2 bits (82), Expect = 0.069 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMS-ISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 559 L+ GP G+GKT LA A +SG PF+ IS ++ M + + N F++A + +I Sbjct: 561 LIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLNI 620 Query: 560 VFID 571 + ID Sbjct: 621 LVID 624
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 50.8 bits (120), Expect = 3e-06 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Frame = +2 Query: 272 KDVAGCDEAKQEIMEFVH-FLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESG 448 +D+ G D K + + F K Y G PKG LLVG GTGK+L AKA A + Sbjct: 228 EDIGGLDALKSWLKKRSRSFSKQSFNY---GIPTPKGLLLVGIQGTGKSLTAKAIANDWT 284 Query: 449 VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFID 571 +P + + VG SR+R + A +P +++ID Sbjct: 285 LPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWID 325
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 50.4 bits (119), Expect = 4e-06 Identities = 27/71 (38%), Positives = 38/71 (53%) Frame = +2 Query: 359 GAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEA 538 G P+G LL+G GTGK+L AKA A E +P + + VG SR+R + A Sbjct: 255 GLPTPRGLLLIGIQGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGESESRLRQMIDVA 314 Query: 539 RQCAPSIVFID 571 +P I++ID Sbjct: 315 ETLSPCILWID 325
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 50.1 bits (118), Expect = 5e-06 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Frame = +2 Query: 338 PKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE-SGVPFMSISGSDFMEMFVGVGPSR 514 P LG K KG LL GPPGTGKTL+A+ +G ++G + + FVG Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKN 298 Query: 515 VRNLFQEARQ 544 VR+LF +A Q Sbjct: 299 VRDLFADAEQ 308 Score = 34.7 bits (78), Expect = 0.20 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPS----RVRNLFQEARQCA 550 LL GP G+GKT LA +S P++ I ++ M +G+ S + +F++A + Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETM---IGLSESTKCAHIVKVFEDAYKSP 590 Query: 551 PSIVFID 571 SI+ +D Sbjct: 591 MSIIILD 597
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 50.1 bits (118), Expect = 5e-06 Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 11/119 (9%) Frame = +2 Query: 221 KATVTKMDKNSKNKVFFK----DVAGCDEAKQEIME--FVHFLKNPKKYEELGAKIPKGA 382 KA++T+ N+ + FK + G D I F L P E+LG KG Sbjct: 248 KASMTRPASNAILQPGFKFEDMGIGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGI 307 Query: 383 LLVGPPGTGKTLLAK-----ATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQ 544 LL GPPGTGKTL+A+ A E + ++G + + +VG VR LF +A + Sbjct: 308 LLYGPPGTGKTLIARQIGKMLNAREPKI----VNGPEILNKYVGQSEENVRKLFADAER 362 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMS-ISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 559 LL GP +GKT LA A S PF+ +S + M + V +F+++ + S+ Sbjct: 589 LLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKSPLSV 648 Query: 560 VFID 571 + +D Sbjct: 649 IVVD 652
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 49.7 bits (117), Expect = 6e-06 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 7/96 (7%) Frame = +2 Query: 278 VAGCDEAKQEIME--FVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK-----ATA 436 + G D+ +I F + P+ E++G K KG LL GPPG GKTLLA+ A Sbjct: 220 IGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNA 279 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQ 544 E V ++G + + +VG + +R LF +A + Sbjct: 280 REPKV----VNGPEILNKYVGESEANIRKLFADAEE 311 Score = 37.4 bits (85), Expect = 0.031 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSR-VRNLFQEARQCAPSI 559 LL GPP +GKT +A A ES PF+ I D M F + ++ +F +A + S Sbjct: 540 LLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSC 599 Query: 560 VFID 571 V +D Sbjct: 600 VVVD 603
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 49.7 bits (117), Expect = 6e-06 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 7/96 (7%) Frame = +2 Query: 278 VAGCDEAKQEIME--FVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK-----ATA 436 + G D+ +I F + P+ E++G K KG LL GPPG GKTLLA+ A Sbjct: 220 IGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNA 279 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQ 544 E V ++G + + +VG + +R LF +A + Sbjct: 280 REPKV----VNGPEILNKYVGESEANIRKLFADAEE 311 Score = 38.5 bits (88), Expect = 0.014 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSR-VRNLFQEARQCAPSI 559 LL GPP +GKT LA A ES PF+ I D M F + ++ +F +A + S Sbjct: 540 LLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSC 599 Query: 560 VFID 571 V +D Sbjct: 600 VVVD 603
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/88 (28%), Positives = 43/88 (48%) Frame = +2 Query: 308 IMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFME 487 ++ V + + + G K+ L GPPG GKTL A+ A E G+P + + Sbjct: 97 LLGLVKEFRRADEIRQHGLKVRSKMLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLIS 156 Query: 488 MFVGVGPSRVRNLFQEARQCAPSIVFID 571 ++G + +R F+ AR+ P ++F D Sbjct: 157 SYLGETATNIRKTFEFARK-QPCVLFFD 183
>LON_RHIME (O69177) ATP-dependent protease La (EC 3.4.21.53)| Length = 806 Score = 47.4 bits (111), Expect = 3e-05 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 11/123 (8%) Frame = +2 Query: 218 GKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALL--V 391 GK + K D N KV D G D+ K+ I+E++ K KG +L V Sbjct: 307 GKKSKIKTDLNHAEKVLDTDHFGLDKVKERIVEYLAVQARSSKI--------KGPILCLV 358 Query: 392 GPPGTGKTLLAKATAGESGVPF--MSISG-SDFMEM------FVGVGPSRVRNLFQEARQ 544 GPPG GKT LAK+ A +G + M++ G D E+ ++G P +V ++A++ Sbjct: 359 GPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHRRTYIGSMPGKVVQSMKKAKK 418 Query: 545 CAP 553 P Sbjct: 419 SNP 421
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 46.6 bits (109), Expect = 5e-05 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 7/96 (7%) Frame = +2 Query: 278 VAGCDEAKQEIME--FVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK-----ATA 436 + G D+ +I F + P+ E++G KG LL GPPG GKTLLA+ A Sbjct: 220 IGGLDKEFSDIFRRAFAFRVFPPEIVEQMGCIHVKGILLYGPPGCGKTLLARQIGKMLNA 279 Query: 437 GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQ 544 E V ++G + + +VG + +R LF +A + Sbjct: 280 REPKV----VNGPEILNKYVGESEANIRKLFADAEE 311 Score = 38.5 bits (88), Expect = 0.014 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +2 Query: 383 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSR-VRNLFQEARQCAPSI 559 LL GPP +GKT LA A ES PF+ I D M F + ++ +F +A + S Sbjct: 540 LLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSC 599 Query: 560 VFID 571 V +D Sbjct: 600 VVVD 603
>RFCL_METJA (Q58294) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 516 Score = 46.6 bits (109), Expect = 5e-05 Identities = 26/69 (37%), Positives = 38/69 (55%) Frame = +2 Query: 272 KDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGV 451 KDVAG ++ K+++ ++ L + PK LLVGPPG GKT LA A A + G Sbjct: 14 KDVAGHEKVKEKLKTWIE--------SYLKGETPKPILLVGPPGCGKTTLAYALANDYGF 65 Query: 452 PFMSISGSD 478 + ++ SD Sbjct: 66 EVIELNASD 74
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/61 (39%), Positives = 33/61 (54%) Frame = +2 Query: 296 AKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGS 475 A++ + + F+ NPK Y + G +G LL GPPG GK+ A AGE G +S S Sbjct: 198 AERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLS 257 Query: 476 D 478 D Sbjct: 258 D 258
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 44.3 bits (103), Expect = 3e-04 Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Frame = +2 Query: 299 KQEIMEFVH-FLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 442 K+ I++ V+ F+KN K Y + G +G LL GPPG+GKT +A AGE Sbjct: 235 KEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGE 283
>LON_RICPR (Q9ZD92) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 43.9 bits (102), Expect = 3e-04 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%) Frame = +2 Query: 218 GKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALL--V 391 GK +K+D N K+ +D G ++ K+ I+E++ L+ K +G +L + Sbjct: 304 GKYDNSKIDINQAEKILNRDHFGLEKVKERIIEYLAVLQRSSKI--------RGPILCLI 355 Query: 392 GPPGTGKTLLAKATAGESGVPFMSIS 469 GPPG GKT L K+ A G + S Sbjct: 356 GPPGVGKTSLVKSIAEGMGRKYTKFS 381
>RFCL_METMP (Q6M0E9) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 486 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/68 (35%), Positives = 38/68 (55%) Frame = +2 Query: 275 DVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 454 DVAG ++ KQ ++E++ + +G + K LL GPPG+GKT LA A A + Sbjct: 15 DVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDYAFD 66 Query: 455 FMSISGSD 478 + ++ SD Sbjct: 67 VIELNASD 74
>HSLU_TREDE (Q73NE3) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 485 Score = 43.9 bits (102), Expect = 3e-04 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Frame = +2 Query: 221 KATVTKMDKNSKNKVFFKDVAGCDEAKQEI-MEFVHFLKNPKKYEELGAKI-PKGALLVG 394 K TV ++DK + G ++AK+ + + + ++ K EE+ +I PK L++G Sbjct: 11 KQTVAELDKY---------IIGQNKAKRAVAIALRNRMRRLKLPEEIRDEIAPKNILMIG 61 Query: 395 PPGTGKTLLAKATAGESGVPFMSISGSDFMEM-FVG 499 P G GKT +A+ A SG PF+ + + + E+ +VG Sbjct: 62 PTGVGKTEIARRLAKLSGAPFLKVEATKYTEVGYVG 97
>HSLU_THEMA (Q9WYZ2) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 463 Score = 43.9 bits (102), Expect = 3e-04 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 4/91 (4%) Frame = +2 Query: 272 KDVAGCDEAKQEIMEFVHFLKNPKKYEELGAK--IPKGALLVGPPGTGKTLLAKATAGES 445 K + G EAK+ + V +K E K +PK L++GP G GKT +A+ A S Sbjct: 18 KYIVGQYEAKKAVAIAVRNRIRRQKLPEEWRKEVLPKNILMIGPTGVGKTEIARRLAQLS 77 Query: 446 GVPFMSISGSDFMEM-FVGVG-PSRVRNLFQ 532 G PF+ + + F E+ +VG S +R+L + Sbjct: 78 GSPFLKVEATRFTEVGYVGKNVDSMIRDLVE 108
>RFCL_SULSO (Q9UXF6) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) (SsoRFC large subunit) Length = 405 Score = 43.9 bits (102), Expect = 3e-04 Identities = 25/69 (36%), Positives = 37/69 (53%) Frame = +2 Query: 272 KDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGV 451 KDV D+AK+++ E++ N G K LL GPPG GKT+LA+A A + Sbjct: 14 KDVENQDDAKKQLQEWIESWLN-------GNSNVKAVLLHGPPGVGKTVLAEALAHDYNF 66 Query: 452 PFMSISGSD 478 + ++ SD Sbjct: 67 ELLEMNASD 75
>CLPX_PORGI (Q7MX10) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 411 Score = 43.5 bits (101), Expect = 4e-04 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 9/107 (8%) Frame = +2 Query: 278 VAGCDEAKQ--EIMEFVHFLKNPKKYEELGAKIPKG-ALLVGPPGTGKTLLAKATAGESG 448 V G D+AK+ + + H+ + ++ + G +I K ++VGP GTGKTLLA+ A Sbjct: 77 VIGQDDAKRFLSVAVYNHYKRLLQQEDSDGVEIEKSNIIMVGPTGTGKTLLARTIAKMLH 136 Query: 449 VPFMSISGSDFMEM-FVGVG-PSRVRNLFQEA----RQCAPSIVFID 571 VPF + + E +VG S + L Q A +Q IVFID Sbjct: 137 VPFAVVDATVLTEAGYVGEDIESILTRLLQAADYDVKQAERGIVFID 183
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 43.5 bits (101), Expect = 4e-04 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +2 Query: 224 ATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVH-FLKNPKKYEELGAKIPKGALLVGPP 400 AT K + ++K V K+ I + VH FL+N + Y+ G +G LL GPP Sbjct: 192 ATEWKPFGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPP 251 Query: 401 GTGKTLLAKATAGE 442 G+GKT A AGE Sbjct: 252 GSGKTSFLYALAGE 265
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 43.1 bits (100), Expect = 6e-04 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Frame = +2 Query: 326 FLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG--ESGVPFMSISGSDFME 487 F++NPK Y + G +G LL GPPG GK+ A AG E + MS+S S + Sbjct: 208 FIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSD 263
>CLPX_BORGA (Q660R1) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 430 Score = 43.1 bits (100), Expect = 6e-04 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 6/66 (9%) Frame = +2 Query: 278 VAGCDEAKQEIMEFVH-----FLKNPKKYEELGAKIPKG-ALLVGPPGTGKTLLAKATAG 439 V G ++AK+ + V+ LKN KY+ G +I K LLVGP G+GKTLLAK A Sbjct: 75 VVGQEDAKKVLSVAVYNHYKRILKN-NKYDN-GIEIEKSNILLVGPTGSGKTLLAKTLAA 132 Query: 440 ESGVPF 457 E VPF Sbjct: 133 EMNVPF 138
>CLPX_BORBU (O51557) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 430 Score = 43.1 bits (100), Expect = 6e-04 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 6/66 (9%) Frame = +2 Query: 278 VAGCDEAKQEIMEFVH-----FLKNPKKYEELGAKIPKG-ALLVGPPGTGKTLLAKATAG 439 V G ++AK+ + V+ LKN KY+ G +I K LLVGP G+GKTLLAK A Sbjct: 75 VVGQEDAKKVLSVAVYNHYKRILKN-NKYDN-GIEIEKSNILLVGPTGSGKTLLAKTLAA 132 Query: 440 ESGVPF 457 E VPF Sbjct: 133 EMNVPF 138
>LON_AZOBR (P77810) ATP-dependent protease La (EC 3.4.21.53)| Length = 810 Score = 43.1 bits (100), Expect = 6e-04 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 11/122 (9%) Frame = +2 Query: 221 KATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGAL--LVG 394 K T K D K+ D G ++ K+ I+E++ K KG + LVG Sbjct: 310 KRTKVKKDLKLAQKILDADHYGLEKVKERILEYLRVQNRMNKV--------KGPIQSLVG 361 Query: 395 PPGTGKTLLAKATAGESGVPF--MSISG-SDFMEM------FVGVGPSRVRNLFQEARQC 547 PPG GKT L K+ A +G F MS+ G D E+ ++G P +V ++A+ Sbjct: 362 PPGVGKTSLGKSIAKSTGRNFVRMSLGGVRDEAEVRGHRRTYIGSMPGKVIQGMKKAKSS 421 Query: 548 AP 553 P Sbjct: 422 NP 423
>RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 479 Score = 43.1 bits (100), Expect = 6e-04 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 5/92 (5%) Frame = +2 Query: 272 KDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGV 451 +DV D+AK+ ++ + +K ++ + ALL GPPG GKT L +A A E + Sbjct: 22 EDVVNQDQAKKILVPWFKAWLEGRKPDK------RAALLYGPPGVGKTSLVEAIASEFNL 75 Query: 452 PFMSISGSDF-----MEMFVGVGPSRVRNLFQ 532 + ++ SD+ +E VG SR R++F+ Sbjct: 76 EMIELNASDYRRRSDIERIVGAA-SRKRSMFK 106
>HSLU_COXBU (Q83A94) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 447 Score = 42.4 bits (98), Expect = 0.001 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%) Frame = +2 Query: 272 KDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKI-----PKGALLVGPPGTGKTLLAKATA 436 K + G ++AK+ + L+N + +LG ++ PK L++GP G GKT +A+ + Sbjct: 14 KFIIGQNDAKRAV---AIALRNRWRRMQLGEELRREIFPKNILMIGPTGVGKTEIARRLS 70 Query: 437 GESGVPFMSISGSDFMEM-FVG 499 +G PF+ I + F E+ +VG Sbjct: 71 DLAGAPFLKIEATKFTEVGYVG 92
>HSLU_STAES (Q8CPH0) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 467 Score = 42.4 bits (98), Expect = 0.001 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Frame = +2 Query: 278 VAGCDEAKQEIMEFVH--FLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGV 451 + G ++AK+++ + + ++ K EE PK L++GP G GKT +A+ A G Sbjct: 21 IVGQNDAKRKVAIALRNRYRRSLLKEEEKQEIAPKNILMIGPTGVGKTEIARRMAKIVGA 80 Query: 452 PFMSISGSDFMEM-FVGVG-PSRVRNLFQEA 538 PF+ + + F E+ +VG S VR+L A Sbjct: 81 PFIKVEATKFTEVGYVGRDVESMVRDLVDVA 111
>HSLU_STAEQ (Q5HPT8) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 467 Score = 42.4 bits (98), Expect = 0.001 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Frame = +2 Query: 278 VAGCDEAKQEIMEFVH--FLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGV 451 + G ++AK+++ + + ++ K EE PK L++GP G GKT +A+ A G Sbjct: 21 IVGQNDAKRKVAIALRNRYRRSLLKEEEKQEIAPKNILMIGPTGVGKTEIARRMAKIVGA 80 Query: 452 PFMSISGSDFMEM-FVGVG-PSRVRNLFQEA 538 PF+ + + F E+ +VG S VR+L A Sbjct: 81 PFIKVEATKFTEVGYVGRDVESMVRDLVDVA 111
>HSLU_BACSU (P39778) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 467 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = +2 Query: 368 IPKGALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEM-FVGVG-PSRVRNLFQ 532 +PK L++GP G GKT +A+ A SG PF+ I + F E+ +VG S VR+L + Sbjct: 51 VPKNILMMGPTGVGKTEIARRIAKLSGAPFIKIEATKFTEVGYVGRDVESMVRDLVE 107
>LON1_BORBU (Q59185) ATP-dependent protease La (EC 3.4.21.53)| Length = 806 Score = 42.4 bits (98), Expect = 0.001 Identities = 28/72 (38%), Positives = 36/72 (50%) Frame = +2 Query: 221 KATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPP 400 K K+D K+ K G +E K I+E++ LK K + GA I LLVGPP Sbjct: 338 KINFDKLDLQKSKKILDKTHYGMNEVKDRIIEYISVLKLRKTQK--GAII----LLVGPP 391 Query: 401 GTGKTLLAKATA 436 G GKT + A A Sbjct: 392 GVGKTSIGAAIA 403
>RFCL_METKA (Q8TZC5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 510 Score = 42.0 bits (97), Expect = 0.001 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 5/96 (5%) Frame = +2 Query: 272 KDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGV 451 K++ DEAK+E+ + + ++ P+ LL GPPGTGKT A A A + G Sbjct: 14 KELVNQDEAKKELAAWAN------EWARGSIPEPRAVLLHGPPGTGKTSAAYALAHDFGW 67 Query: 452 PFMSISGSD-----FMEMFVGVGPSRVRNLFQEARQ 544 + ++ SD +E VG G S R+L + R+ Sbjct: 68 DVIELNASDKRTRNVIEKIVG-GASTSRSLLRMTRE 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,171,126 Number of Sequences: 219361 Number of extensions: 1765373 Number of successful extensions: 8871 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 8122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8829 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
