>ref|NM_191722.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 474

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 516 ggctacaccgtcgcgtcgggccgcgcgcccgacttctgcgtgccgtggaacgggg 570
           |||| |||||||||||| ||||||||||| | |||||| |||||| |||| ||||
Sbjct: 197 ggcttcaccgtcgcgtccggccgcgcgccgggcttctgagtgccggggaaagggg 251

>ref|NM_191715.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 573

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                       
Query: 446 cctgcacgccagcgaccgccgcgccacggggagctgctaccaccacggggagggggcggt 505
           ||||||||||||| |||| |||||  ||||  | ||||||| |||||| |||| || |||
Sbjct: 249 cctgcacgccagcaaccggcgcgcgccgggccgatgctaccgccacggcgaggcggtggt 308

                                                              
Query: 506 gacctacggcggctacaccgtcgcgtcgggccgcgcgcccgacttctgcgt 556
           |   |||| ||||| |||||||||| |||||||  ||| || |||||||||
Sbjct: 309 gcgttacgccggcttcaccgtcgcggcgggccggacgcgcgtcttctgcgt 359

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 516      ggctacaccgtcgcgtcgggccgcgcgcccgacttctgcgtgccgtggaacgggg 570
                |||| |||||||||||| ||||||||||| | |||||| |||||| |||| ||||
Sbjct: 29606818 ggcttcaccgtcgcgtccggccgcgcgccgggcttctgagtgccggggaaagggg 29606764



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 90/111 (81%)
 Strand = Plus / Minus

                                                                            
Query: 446      cctgcacgccagcgaccgccgcgccacggggagctgctaccaccacggggagggggcggt 505
                ||||||||||||| |||| |||||  ||||  | ||||||| |||||| |||| || |||
Sbjct: 29586356 cctgcacgccagcaaccggcgcgcgccgggccgatgctaccgccacggcgaggcggtggt 29586297

                                                                   
Query: 506      gacctacggcggctacaccgtcgcgtcgggccgcgcgcccgacttctgcgt 556
                |   |||| ||||| |||||||||| |||||||  ||| || |||||||||
Sbjct: 29586296 gcgttacgccggcttcaccgtcgcggcgggccggacgcgcgtcttctgcgt 29586246



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 407     gatggcgtccacccgccacc 426
               ||||||||||||||||||||
Sbjct: 3033732 gatggcgtccacccgccacc 3033751

>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1142C05
          Length = 151457

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 516   ggctacaccgtcgcgtcgggccgcgcgcccgacttctgcgtgccgtggaacgggg 570
             |||| |||||||||||| ||||||||||| | |||||| |||||| |||| ||||
Sbjct: 76638 ggcttcaccgtcgcgtccggccgcgcgccgggcttctgagtgccggggaaagggg 76584



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 90/111 (81%)
 Strand = Plus / Minus

                                                                         
Query: 446   cctgcacgccagcgaccgccgcgccacggggagctgctaccaccacggggagggggcggt 505
             ||||||||||||| |||| |||||  ||||  | ||||||| |||||| |||| || |||
Sbjct: 56176 cctgcacgccagcaaccggcgcgcgccgggccgatgctaccgccacggcgaggcggtggt 56117

                                                                
Query: 506   gacctacggcggctacaccgtcgcgtcgggccgcgcgcccgacttctgcgt 556
             |   |||| ||||| |||||||||| |||||||  ||| || |||||||||
Sbjct: 56116 gcgttacgccggcttcaccgtcgcggcgggccggacgcgcgtcttctgcgt 56066

>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0456F08
          Length = 156850

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 90/111 (81%)
 Strand = Plus / Minus

                                                                          
Query: 446    cctgcacgccagcgaccgccgcgccacggggagctgctaccaccacggggagggggcggt 505
              ||||||||||||| |||| |||||  ||||  | ||||||| |||||| |||| || |||
Sbjct: 152630 cctgcacgccagcaaccggcgcgcgccgggccgatgctaccgccacggcgaggcggtggt 152571

                                                                 
Query: 506    gacctacggcggctacaccgtcgcgtcgggccgcgcgcccgacttctgcgt 556
              |   |||| ||||| |||||||||| |||||||  ||| || |||||||||
Sbjct: 152570 gcgttacgccggcttcaccgtcgcggcgggccggacgcgcgtcttctgcgt 152520

>dbj|AB206058.1| Uncultured prokaryote cbbM gene for ribulose-1,5-bisphosphate
           carboxylase oxygenase large subunit, partial cds,
           clone:Fryer(II)-15
          Length = 630

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 207 cttggcggcgacttcatcaaga 228
           ||||||||||||||||||||||
Sbjct: 64  cttggcggcgacttcatcaaga 85

>gb|AF465803.1| Rubrobacter taiwanensis 16S ribosomal RNA gene, partial sequence
          Length = 1476

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 167  gtacccggcgaggaagccccg 187
            |||||||||||||||||||||
Sbjct: 1064 gtacccggcgaggaagccccg 1044

>gb|AC164925.3| Colobus guereza clone CH272-271L4, complete sequence
          Length = 199954

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   ccacccgccaccgggccgcct 435
             |||||||||||||||||||||
Sbjct: 12599 ccacccgccaccgggccgcct 12619

>gb|AF479791.1| Rubrobacter taiwanensis strain LS-286 16S ribosomal RNA gene, partial
            sequence
          Length = 1475

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 167  gtacccggcgaggaagccccg 187
            |||||||||||||||||||||
Sbjct: 1064 gtacccggcgaggaagccccg 1044

>gb|AC111069.9| Mus musculus chromosome 18, clone RP24-164O22, complete sequence
          Length = 183457

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 61    cacgttccctaccggccggccggcc 85
             |||||||||| ||||||||||||||
Sbjct: 80482 cacgttccctgccggccggccggcc 80458

>gb|AY836679.1| Bifidobacterium longum strain JCM1217
            endo-alpha-N-acetylgalactosaminidase (engBF) gene,
            complete cds
          Length = 6218

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 505  tgacctacggcggctacacc 524
            ||||||||||||||||||||
Sbjct: 2666 tgacctacggcggctacacc 2685

>ref|XM_550200.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 561

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 gatggcgtccacccgccacc 426
           ||||||||||||||||||||
Sbjct: 57  gatggcgtccacccgccacc 38

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 523     ccgtcgcgtcgggccgcgcg 542
               ||||||||||||||||||||
Sbjct: 2159957 ccgtcgcgtcgggccgcgcg 2159976



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 523    ccgtcgcgtcgggccgcgcg 542
              ||||||||||||||||||||
Sbjct: 978311 ccgtcgcgtcgggccgcgcg 978292

>ref|NM_212844.1| Danio rerio interleukin 1, beta (il1b), mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 263 catctccaccatctgcgaat 282
           ||||||||||||||||||||
Sbjct: 762 catctccaccatctgcgaat 743

>gb|BC098597.1| Danio rerio interleukin 1, beta, mRNA (cDNA clone MGC:111873
           IMAGE:7228829), complete cds
          Length = 1728

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 263 catctccaccatctgcgaat 282
           ||||||||||||||||||||
Sbjct: 814 catctccaccatctgcgaat 795

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 368     ggcgatcccgaggaacggca 387
               ||||||||||||||||||||
Sbjct: 1879349 ggcgatcccgaggaacggca 1879330

>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16
          Length = 348068

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 443    cgtcctgcacgccagcgacc 462
              ||||||||||||||||||||
Sbjct: 155638 cgtcctgcacgccagcgacc 155657

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 523     ccgtcgcgtcgggccgcgcg 542
               ||||||||||||||||||||
Sbjct: 2295586 ccgtcgcgtcgggccgcgcg 2295567



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 523    ccgtcgcgtcgggccgcgcg 542
              ||||||||||||||||||||
Sbjct: 321585 ccgtcgcgtcgggccgcgcg 321604

>gb|AY119185.1| Drosophila melanogaster SD09114 full insert cDNA
          Length = 1012

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 gccggcgctcaaactcaact 249
           ||||||||||||||||||||
Sbjct: 301 gccggcgctcaaactcaact 282

>gb|AF396455.1|AF396455 Drosophila melanogaster BthD selenoprotein mRNA, complete cds
          Length = 1010

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 gccggcgctcaaactcaact 249
           ||||||||||||||||||||
Sbjct: 302 gccggcgctcaaactcaact 283

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 523     ccgtcgcgtcgggccgcgcg 542
               ||||||||||||||||||||
Sbjct: 2003062 ccgtcgcgtcgggccgcgcg 2003043



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 523     ccgtcgcgtcgggccgcgcg 542
               ||||||||||||||||||||
Sbjct: 1843176 ccgtcgcgtcgggccgcgcg 1843157

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      cggccggccggccgggaaga 92
               ||||||||||||||||||||
Sbjct: 2312799 cggccggccggccgggaaga 2312780

>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 415    ccacccgccaccgggccgcc 434
              ||||||||||||||||||||
Sbjct: 319948 ccacccgccaccgggccgcc 319967

>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0011G08
          Length = 139490

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 407    gatggcgtccacccgccacc 426
              ||||||||||||||||||||
Sbjct: 115249 gatggcgtccacccgccacc 115268

>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0473D02
          Length = 146185

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    cggccggccggccgggaaga 92
             ||||||||||||||||||||
Sbjct: 60298 cggccggccggccgggaaga 60279

>gb|AY340959.1| Danio rerio interleukin 1 beta mRNA, complete cds
          Length = 822

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 263 catctccaccatctgcgaat 282
           ||||||||||||||||||||
Sbjct: 762 catctccaccatctgcgaat 743

>gb|AC139112.4| Cercopithecus aethiops clone CH252-467C20, complete sequence
          Length = 172237

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 415    ccacccgccaccgggccgcc 434
              ||||||||||||||||||||
Sbjct: 106109 ccacccgccaccgggccgcc 106128

>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 505     tgacctacggcggctacacc 524
               ||||||||||||||||||||
Sbjct: 1419873 tgacctacggcggctacacc 1419854

>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0433F09
          Length = 150150

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  gatggcgtccacccgccacc 426
            ||||||||||||||||||||
Sbjct: 1772 gatggcgtccacccgccacc 1791


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,945,384
Number of Sequences: 3902068
Number of extensions: 2945384
Number of successful extensions: 56486
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55906
Number of HSP's gapped (non-prelim): 580
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)