ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart12d03 |
|---|---|
| Clone Library Name | barley_pub |
>ETFB_HUMAN (P38117) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 90.9 bits (224), Expect = 2e-18 Identities = 45/82 (54%), Positives = 55/82 (67%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 +++LVAVKRV+DYAVK+RV+PDRT V T VK SMNPFC V+A Sbjct: 3 LRVLVAVKRVIDYAVKIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIA 62 Query: 450 ATVGPAQAADTLRTALAMGADR 515 + GPAQ +T+RTALAMGADR Sbjct: 63 VSCGPAQCQETIRTALAMGADR 84
>ETFB_PONPY (Q5RFK0) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 89.4 bits (220), Expect = 7e-18 Identities = 45/82 (54%), Positives = 54/82 (65%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 ++ LVAVKRV+DYAVK+RV+PDRT V T VK SMNPFC V+A Sbjct: 3 LRALVAVKRVIDYAVKIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIA 62 Query: 450 ATVGPAQAADTLRTALAMGADR 515 + GPAQ +T+RTALAMGADR Sbjct: 63 VSCGPAQCQETIRTALAMGADR 84
>ETFB_BOVIN (Q2TBV3) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 86.3 bits (212), Expect = 6e-17 Identities = 42/82 (51%), Positives = 54/82 (65%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 ++ LVAVKRV+D+AVK+RV+PD+T V T VK SMNPFC ++A Sbjct: 3 LRALVAVKRVIDFAVKIRVKPDKTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEIIA 62 Query: 450 ATVGPAQAADTLRTALAMGADR 515 + GPAQ +T+RTALAMGADR Sbjct: 63 VSCGPAQCQETIRTALAMGADR 84
>ETFB_PIG (Q6UAQ8) Electron transfer flavoprotein beta subunit| Length = 254 Score = 85.5 bits (210), Expect = 1e-16 Identities = 43/82 (52%), Positives = 53/82 (64%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 ++ LVAVKRV+D+AVK+RV+PDRT V VK SMNPFC V+A Sbjct: 3 LRALVAVKRVIDFAVKIRVKPDRTGVVMDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIA 62 Query: 450 ATVGPAQAADTLRTALAMGADR 515 + GPAQ +T+RTALAMGADR Sbjct: 63 VSCGPAQCQETIRTALAMGADR 84
>ETFB_BRAJA (P53575) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 249 Score = 84.3 bits (207), Expect = 2e-16 Identities = 44/82 (53%), Positives = 54/82 (65%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 MK+LV VKRVVDY VKVRV+ D + V+ A+VKMSMNPF VV Sbjct: 1 MKVLVPVKRVVDYNVKVRVKGDGSGVELANVKMSMNPFDEIAVEEALRLKEGGKATEVVV 60 Query: 450 ATVGPAQAADTLRTALAMGADR 515 ++GPAQA++T+RT LAMGADR Sbjct: 61 VSIGPAQASETIRTGLAMGADR 82
>ETFB_MOUSE (Q9DCW4) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 83.6 bits (205), Expect = 4e-16 Identities = 40/82 (48%), Positives = 54/82 (65%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 ++ LVAVKRV+D+AVK+RV+PD++ V T VK SMNPFC ++A Sbjct: 3 LRALVAVKRVIDFAVKIRVKPDKSGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEIIA 62 Query: 450 ATVGPAQAADTLRTALAMGADR 515 + GP+Q +T+RTALAMGADR Sbjct: 63 VSCGPSQCQETIRTALAMGADR 84
>ETFB_PARDE (P38975) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 252 Score = 83.2 bits (204), Expect = 5e-16 Identities = 43/83 (51%), Positives = 54/83 (65%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 MK+LV VKR++DY VK RV+ D + VD A+VKMSMNPF ++A Sbjct: 1 MKVLVPVKRLIDYNVKARVKSDGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIA 60 Query: 450 ATVGPAQAADTLRTALAMGADRA 518 ++G QAA+TLRTALAMGADRA Sbjct: 61 VSIGVKQAAETLRTALAMGADRA 83
>ETFB_RAT (Q68FU3) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 82.8 bits (203), Expect = 6e-16 Identities = 40/82 (48%), Positives = 53/82 (64%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 ++ LVAVKRV+D+AVK+RV+PD++ V T VK SMNPFC ++A Sbjct: 3 LRALVAVKRVIDFAVKIRVKPDKSGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEIIA 62 Query: 450 ATVGPAQAADTLRTALAMGADR 515 + GP Q +T+RTALAMGADR Sbjct: 63 VSCGPPQCQETIRTALAMGADR 84
>ETFB_YEAST (P42940) Probable electron transfer flavoprotein beta-subunit| (Beta-ETF) Length = 261 Score = 53.1 bits (126), Expect = 5e-07 Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPF--CXXXXXXXXXXXXXXXXXXV 443 ++ILV VKRVVD+ +K RV T ++T+ +K S+NPF Sbjct: 7 LRILVPVKRVVDFQIKPRVNKTLTGIETSGIKFSINPFDDIAVEEAIRIKEKNKSLVEST 66 Query: 444 VAATVGPAQAADTLRTALAMGAD 512 A ++G A+A D LR LA G D Sbjct: 67 HAVSIGSAKAQDILRNCLAKGID 89
>ETFB_SCHPO (Q9UTH2) Probable electron transfer flavoprotein beta-subunit| (Beta-ETF) Length = 254 Score = 52.0 bits (123), Expect = 1e-06 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 2/85 (2%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFC--XXXXXXXXXXXXXXXXXXV 443 ++ILV VKR +DY +K R+ +TAVD + KMS+NPFC Sbjct: 4 IRILVGVKRTLDYMLKPRINATKTAVDLSGQKMSINPFCDIAVEEAIRMKETLKNRIEDT 63 Query: 444 VAATVGPAQAADTLRTALAMGADRA 518 + T G + LR LA G RA Sbjct: 64 LVVTAGQTSSEPILRQCLAKGIGRA 88
>ETFB_MEGEL (O85691) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 270 Score = 47.4 bits (111), Expect = 3e-05 Identities = 31/83 (37%), Positives = 40/83 (48%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 M+ILV VK+V D A +V++ P + V A V NPF + Sbjct: 1 MEILVCVKQVPDTA-EVKIDPVKHTVIRAGVPNIFNPFDQNALEAALALKDADKDVKITL 59 Query: 450 ATVGPAQAADTLRTALAMGADRA 518 ++GP QA D LR LAMGAD A Sbjct: 60 LSMGPDQAKDVLREGLAMGADDA 82
>FIXA_AZOCA (P26482) Protein fixA| Length = 281 Score = 42.0 bits (97), Expect = 0.001 Identities = 28/83 (33%), Positives = 38/83 (45%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 M I+V +K+V D A ++RV P + V +NP+ V Sbjct: 1 MHIVVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPY-DLFALEAALALRDQHGGEVTV 58 Query: 450 ATVGPAQAADTLRTALAMGADRA 518 T+GP A D+LR AL GADRA Sbjct: 59 LTMGPPSAEDSLRKALTFGADRA 81
>FIXA_RHISN (Q53210) Protein fixA| Length = 285 Score = 39.3 bits (90), Expect = 0.008 Identities = 27/83 (32%), Positives = 38/83 (45%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 M I+V +K+V D A ++RV P + V +NP+ V Sbjct: 1 MHIVVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPY-DLFALEQALQVRDHHGGEVTV 58 Query: 450 ATVGPAQAADTLRTALAMGADRA 518 T+GP A ++LR AL GADRA Sbjct: 59 LTMGPPMAEESLRKALTYGADRA 81
>ETFB_METME (P53570) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 264 Score = 37.7 bits (86), Expect = 0.023 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 1/84 (1%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXX-VV 446 MKILVAVK+ +R D VD + +N + VV Sbjct: 1 MKILVAVKQTAALEEDFEIREDGMDVDEDFMMYDLNEWDDFSLEEAMKIKESSDTDVEVV 60 Query: 447 AATVGPAQAADTLRTALAMGADRA 518 +VGP + ++LR LA GADRA Sbjct: 61 VVSVGPDRVDESLRKCLAKGADRA 84
>FIXA_BRAJA (P53577) Protein fixA| Length = 288 Score = 37.0 bits (84), Expect = 0.039 Identities = 25/83 (30%), Positives = 37/83 (44%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 M +V +K+V D A ++RV P + V +NP+ + Sbjct: 1 MHNIVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPY-DLFALEAALGLRDRFGGEITV 58 Query: 450 ATVGPAQAADTLRTALAMGADRA 518 T+GP A ++LR AL GADRA Sbjct: 59 LTMGPPSAEESLRKALTYGADRA 81
>ETFB_CLOTS (P97089) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 260 Score = 34.7 bits (78), Expect = 0.20 Identities = 28/83 (33%), Positives = 36/83 (43%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 M ILV +K+V D +VR+ P + V +NP V Sbjct: 1 MNILVLIKQVPD-TNEVRIDPVTKTLIREGVPSIINPD-DKNALEEAIRIREKVGGKVTV 58 Query: 450 ATVGPAQAADTLRTALAMGADRA 518 ++GP QA LR ALAMGAD A Sbjct: 59 ISMGPTQAEVALREALAMGADEA 81
>ETFB_BACSU (P94550) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 257 Score = 34.3 bits (77), Expect = 0.26 Identities = 25/83 (30%), Positives = 36/83 (43%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 M + V +KR D K+ + + D A + +NP+ + A Sbjct: 1 MNLFVLMKRTFDTEEKIVIETGKIQDDGA--EWIINPY-DEYAIEEAIQLKEKHGGTITA 57 Query: 450 ATVGPAQAADTLRTALAMGADRA 518 TVG +A LRTALAMG D+A Sbjct: 58 VTVGGEEAEKELRTALAMGCDQA 80
>ETFB_CLOAB (P52040) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 259 Score = 34.3 bits (77), Expect = 0.26 Identities = 27/83 (32%), Positives = 38/83 (45%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 M I+V +K+V D A +VR+ P + + V +NP V Sbjct: 1 MNIVVCLKQVPDTA-EVRIDPVKGTLIREGVPSIINPD-DKNALEEALVLKDNYGAHVTV 58 Query: 450 ATVGPAQAADTLRTALAMGADRA 518 ++GP QA + L ALAMGAD A Sbjct: 59 ISMGPPQAKNALVEALAMGADEA 81
>ETFB_MYCTU (P64097) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 266 Score = 31.2 bits (69), Expect = 2.2 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 441 VVAATVGPAQAADTLRTALAMGADRA 518 V T GP +A + +R AL+MGAD+A Sbjct: 63 VTVLTAGPERATEAIRKALSMGADKA 88
>ETFB_MYCLE (O33095) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 266 Score = 31.2 bits (69), Expect = 2.2 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 441 VVAATVGPAQAADTLRTALAMGADRA 518 V T GP +A + +R AL+MGAD+A Sbjct: 63 VTVLTAGPERATEAIRKALSMGADKA 88
>ETFB_MYCBO (P64098) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 266 Score = 31.2 bits (69), Expect = 2.2 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 441 VVAATVGPAQAADTLRTALAMGADRA 518 V T GP +A + +R AL+MGAD+A Sbjct: 63 VTVLTAGPERATEAIRKALSMGADKA 88
>FIXA_AZOVI (P53576) Protein fixA| Length = 281 Score = 31.2 bits (69), Expect = 2.2 Identities = 23/83 (27%), Positives = 34/83 (40%) Frame = +3 Query: 270 MKILVAVKRVVDYAVKVRVRPDRTAVDTASVKMSMNPFCXXXXXXXXXXXXXXXXXXVVA 449 M +V +K++ D A ++RV P + V +NP+ V Sbjct: 1 MHSVVCIKQLPDSA-QIRVHPVTNTIMRQGVPAIINPY-DLFALEEALRLKDKFGGTVTV 58 Query: 450 ATVGPAQAADTLRTALAMGADRA 518 T+GP A LR L+ GAD A Sbjct: 59 VTMGPPMAEAALRKCLSFGADDA 81
>H5_CAIMO (P06513) Histone H5| Length = 193 Score = 29.6 bits (65), Expect = 6.3 Identities = 16/56 (28%), Positives = 22/56 (39%) Frame = +3 Query: 60 PLHRRSAAATARRGLQPHAAVDPKHVRSPLFVPRGLGLETRTTG*ARTQREAPPLT 227 P R+ ARR P A P+ RSP P+ + R A ++ P T Sbjct: 106 PAGRKKKKKAARRSTSPRKAARPRKARSPAKKPKAAARKARKKSRASPKKAKKPKT 161
>ATM_ARATH (Q9M3G7) Serine/threonine-protein kinase ATM (EC 2.7.11.1) (Ataxia| telangiectasia mutated homolog) (AtATM) Length = 3856 Score = 29.6 bits (65), Expect = 6.3 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = -3 Query: 281 QDLHAAGGNGDPVLSQSVGQW--GRFSLCSCLS 189 +D+ AAGG P L S+G W G SL SC S Sbjct: 1661 RDIIAAGGKAVPGLPVSMGNWKLGMVSLISCFS 1693 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,022,109 Number of Sequences: 219361 Number of extensions: 850972 Number of successful extensions: 2285 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2233 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2276 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
