Clone Information

BLAST Search Result

Clone Name	bart12c12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-bind...	37	0.031
2	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	36	0.068
3	ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atr...	36	0.068
4	ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atr...	36	0.068
5	ATG2_EMENI (Q5B1T9) Autophagy-related protein 2	33	0.58
6	DEND_HUMAN (O94850) Dendrin	33	0.58
7	EXTN_DAUCA (P06599) Extensin precursor	33	0.75
8	XKR4_RAT (Q5GH59) XK-related protein 4	33	0.75
9	FGF7_RAT (Q02195) Keratinocyte growth factor precursor (KGF) (Fi...	32	0.98
10	SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Sh...	28	1.3
11	PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)	32	1.3
12	TRA2_DROME (P19018) Transformer-2 sex-determining protein	32	1.3
13	WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protei...	32	1.7
14	KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC ...	32	1.7
15	P73_HUMAN (O15350) Tumor protein p73 (p53-like transcription fac...	32	1.7
16	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	32	1.7
17	NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 pr...	31	2.2
18	PHC2_BRARE (Q8QHL5) Polyhomeotic-like protein 2	31	2.2
19	ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (I...	31	2.2
20	ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0	31	2.2
21	IASPP_MOUSE (Q5I1X5) RelA-associated inhibitor (Inhibitor of ASP...	31	2.2
22	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	31	2.2
23	CD2_HORSE (P37998) T-cell surface antigen CD2 precursor	31	2.9
24	BAR2_CHITE (P02851) Balbiani ring protein 2 (Giant secretory pro...	31	2.9
25	HXC4_MOUSE (Q08624) Homeobox protein Hox-C4 (Hox-3.5)	31	2.9
26	SWC4_NEUCR (Q870Q1) SWR1-complex protein 4	31	2.9
27	NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 pr...	31	2.9
28	NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4...	30	3.7
29	EXTN2_ARATH (Q9M1G9) Extensin-2 precursor (AtExt2) (Cell wall hy...	30	3.7
30	OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b...	30	3.7
31	VNUA_PRVKA (P33485) Probable nuclear antigen	30	3.7
32	GATA_NEIMB (Q9JYZ9) Glutamyl-tRNA(Gln) amidotransferase subunit ...	30	3.7
33	CVP5_PIMHY (Q8T0W1) Cysteine-rich venom protein 5 precursor	30	3.7
34	WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protei...	30	4.9
35	MSH6_SCHPO (O74502) DNA mismatch repair protein msh6	30	4.9
36	ECM1_RAT (Q62894) Extracellular matrix protein 1 precursor (Secr...	30	4.9
37	CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22	30	4.9
38	ADB4C_MELGA (P43141) Beta-4C adrenergic receptor (Beta-4C adreno...	30	4.9
39	PODXL_MOUSE (Q9R0M4) Podocalyxin-like protein 1 precursor	30	4.9
40	EXPA_DROME (Q07436) Protein expanded	30	4.9
41	BOWEL_DROME (Q9VQU9) Protein bowel (Brother of odd with entrails...	30	4.9
42	NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 prec...	30	4.9
43	IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Prot...	30	4.9
44	RSP5_YEAST (P39940) E3 ubiquitin--protein ligase RSP5 (EC 6.3.2.-)	30	4.9
45	SAS_DROME (Q04164) Putative epidermal cell surface receptor prec...	30	6.4
46	NCOR1_RAT (Q9WUB5) Nuclear receptor corepressor 1 (N-CoR1) (N-Co...	30	6.4
47	PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC...	30	6.4
48	SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains pro...	30	6.4
49	P73_CERAE (Q9XSK8) Tumor protein p73 (p53-like transcription fac...	30	6.4
50	YAV1_XANCV (P14727) Hypothetical 122 kDa avirulence protein in a...	30	6.4
51	TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorti...	30	6.4
52	YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5	30	6.4
53	GLI3_MOUSE (Q61602) Zinc finger protein GLI3	30	6.4
54	CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21	30	6.4
55	MKL2_MOUSE (P59759) MKL/myocardin-like protein 2 (Myocardin-rela...	29	8.3
56	BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)	29	8.3
57	GLI3_PANTR (Q5IS56) Zinc finger protein GLI3	29	8.3
58	GLI3_HUMAN (P10071) Zinc finger protein GLI3	29	8.3
59	GATA_NEIMA (Q9JTZ5) Glutamyl-tRNA(Gln) amidotransferase subunit ...	29	8.3
60	DEND_RAT (P50617) Dendrin	29	8.3

>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4|
           precursor (LTBP-4)
          Length = 1666

 Score = 37.4 bits (85), Expect = 0.031
 Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = +3

Query: 183 PPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHCS 362
           PP  +  F  +C AGPG+  +     RYN+ PL  +P      Q R      P TPR  +
Sbjct: 447 PPYGSEGFREICPAGPGY-HYSASDLRYNTRPLNQDPPRVTFNQPR----VPPATPRPPT 501

Query: 363 S--STRRRDPSHPTRSPDP 413
               TRR +P  P   P P
Sbjct: 502 GFLPTRRPEP-RPDPGPQP 519

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 36.2 bits (82), Expect = 0.068
 Identities = 26/79 (32%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
 Frame = +3

Query: 180 PPPSYNPAFLLLCAAGPGHASH-HGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRH 356
           PPPS+ P  L      P   SH H  PS  ++ P    P  H R    SR    PP    
Sbjct: 125 PPPSHGPGHLPSHGQRPPSPSHGHAPPSGGHTPPRGQHPPSHRRPSPPSRHGHPPP---- 180

Query: 357 CSSSTRRRDPSHPTRSPDP 413
               T  + P  P  SP P
Sbjct: 181 ---PTYAQPPPTPIYSPSP 196



 Score = 32.3 bits (72), Expect = 0.98
 Identities = 25/80 (31%), Positives = 29/80 (36%)
 Frame = +3

Query: 180 PPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHC 359
           PPPSY        + GPGH   HGQ            PSH         G   PP  +H 
Sbjct: 118 PPPSYGAP---PPSHGPGHLPSHGQRP--------PSPSHG---HAPPSGGHTPPRGQHP 163

Query: 360 SSSTRRRDPSHPTRSPDPSH 419
            S  R   PS     P P++
Sbjct: 164 PSHRRPSPPSRHGHPPPPTY 183



 Score = 31.6 bits (70), Expect = 1.7
 Identities = 27/97 (27%), Positives = 33/97 (34%), Gaps = 16/97 (16%)
 Frame = +3

Query: 171 RVPPPPSYNPAFLLLCAAGP-----GHA-----------SHHGQPSRYNSSPLRSEPSHH 302
           +V PPP+Y+P         P     GH            +H   P  +  SPLR  P   
Sbjct: 197 QVQPPPTYSPPPPTHVQPTPSPPSRGHQPQPPTHRHAPPTHRHAPPTHQPSPLRHLPPSP 256

Query: 303 VRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTRSPDP 413
            RQ      S  PP        +    P  PT SP P
Sbjct: 257 RRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPP 293



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 29/99 (29%), Positives = 35/99 (35%), Gaps = 20/99 (20%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAAGPGHASHHGQPSRYN----------SSPLRSEPSHHVRQQLRSR 326
           PPPP+Y+P         P +A     P  Y+           SP+ S P   V Q L   
Sbjct: 443 PPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQV-QPLPPT 501

Query: 327 GSAAPPTPRHCSSSTRR----------RDPSHPTRSPDP 413
            S  PP   H      R          + PS PT SP P
Sbjct: 502 FSPPPPRRIHLPPPPHRQPRPPTPTYGQPPSPPTFSPPP 540



 Score = 30.4 bits (67), Expect = 3.7
 Identities = 28/81 (34%), Positives = 31/81 (38%)
 Frame = +3

Query: 180 PPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHC 359
           PPPS+    L     GP     H  PSR  + P    PS  +          APP P H 
Sbjct: 78  PPPSHG--HLPPSVGGPPPHRGHLPPSRGFNPP----PSPVISPSHPPPSYGAPP-PSHG 130

Query: 360 SSSTRRRDPSHPTRSPDPSHG 422
                   PSH  R P PSHG
Sbjct: 131 PGHL----PSHGQRPPSPSHG 147

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>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 36.2 bits (82), Expect = 0.068
 Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSS-----PLRSEPSH----HVRQQLRSRG 329
           PPPP   P  L       G +SHH  P   + S     P    P+H    H +      G
Sbjct: 505 PPPPGAFPHPL------EGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAG 558

Query: 330 SAAPPTPRHCSSSTRRRDPSHPTRSPDPSHG 422
              PP     +SS+     S+P   P PS G
Sbjct: 559 PNGPPVSSSSNSSSSTSQGSYPCSHPSPSQG 589

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>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 36.2 bits (82), Expect = 0.068
 Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSS-----PLRSEPSH----HVRQQLRSRG 329
           PPPP   P  L       G +SHH  P   + S     P    P+H    H +      G
Sbjct: 504 PPPPGAFPHPL------EGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAG 557

Query: 330 SAAPPTPRHCSSSTRRRDPSHPTRSPDPSHG 422
              PP     +SS+     S+P   P PS G
Sbjct: 558 PNGPPVSSSSNSSSSTSQGSYPCSHPSPSQG 588

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>ATG2_EMENI (Q5B1T9) Autophagy-related protein 2|
          Length = 2102

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = +3

Query: 270 SSPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRR------DPSHPTRS-PDPSHG 422
           SSPLRS+ S     Q  S  S+ PP P   SSST         +PS PT   P+  HG
Sbjct: 289 SSPLRSKSS-----QSSSPASSVPPAPSSASSSTHAMMASTIFEPSQPTVDIPEDEHG 341

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>DEND_HUMAN (O94850) Dendrin|
          Length = 657

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 25/86 (29%), Positives = 34/86 (39%)
 Frame = +3

Query: 156 PWI*ARVPPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSA 335
           PW   R P PPSY    LL  +AG        +P  Y + P    P H      R  G++
Sbjct: 138 PWG-GRRPGPPSYEAHLLLRGSAGTAPRRRWDRPPPYVAPPSYEGP-HRTLGTKRGPGNS 195

Query: 336 APPTPRHCSSSTRRRDPSHPTRSPDP 413
             PT    +++  R D     +  DP
Sbjct: 196 QVPTSSAPAATPARTDGGRTKKRLDP 221

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>EXTN_DAUCA (P06599) Extensin precursor|
          Length = 306

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 23/79 (29%), Positives = 32/79 (40%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRH 356
           PPPP ++PA        P H   +  P      P    P HH + + +   S  PPTP +
Sbjct: 146 PPPPKHSPA--------PEHHYKYKSPPPPKHFP---APEHHYKYKYK---SPPPPTPVY 191

Query: 357 CSSSTRRRDPSHPTRSPDP 413
              S     P +  +SP P
Sbjct: 192 KYKSPPPPTPVYKYKSPPP 210

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>XKR4_RAT (Q5GH59) XK-related protein 4|
          Length = 647

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 16/98 (16%)
 Frame = +3

Query: 168 ARVPPPPSYNPAFLLLCAAGPGHASH----HGQPSRYNSSPLRSEPSHHVRQQLRSRGSA 335
           AR PP     P+FL+     P  A+H    H QP     S ++ +    + ++  +R S 
Sbjct: 2   ARPPPLLVQKPSFLVEACCSPSPATHLAPYHTQPGARTPSTIQRDLLFPIPRRCHARSSP 61

Query: 336 APPT--------PRHCSSSTRRRDPS----HPTRSPDP 413
            PP          +H + S     PS    HPT S  P
Sbjct: 62  RPPALGGGPTQRLQHAARSAHPIPPSVKEIHPTFSEIP 99

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>FGF7_RAT (Q02195) Keratinocyte growth factor precursor (KGF) (Fibroblast|
           growth factor 7) (FGF-7) (HBGF-7)
          Length = 194

 Score = 32.3 bits (72), Expect = 0.98
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +3

Query: 159 WI*ARVPPPPSYNPAFLLLCAAGP-GHASHHGQPSRYNSSPLRSEPSHHVR 308
           WI  R+ P P Y P F L+C  G    A +   P +  +S   S P  H R
Sbjct: 4   WILTRILPTPLYRPCFHLVCLVGTISLACNDMSPEQTATSVNCSSPERHTR 54

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>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)|
           (Proline-rich synapse associated protein 2) (ProSAP2)
           (SPANK-2)
          Length = 1815

 Score = 28.5 bits (62), Expect(2) = 1.3
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 276 PLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTRSPDPS 416
           P R  PS+  R++L      A P P   S+S        P  SP P+
Sbjct: 420 PFRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGDQPAASPGPT 466



 Score = 21.9 bits (45), Expect(2) = 1.3
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 424 GFHDAQSSDPGYAAPTPSPGDA 489
           G      S PG + P P PG A
Sbjct: 504 GHSKISPSGPGGSGPAPGPGPA 525

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>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
 Frame = +3

Query: 225  GPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPR---HCSSSTRRRDPSHP 395
            GP        P    S P R  PS H R   R R  AA  +P      + S   R     
Sbjct: 3234 GPRARQPQSPPRTRESPPTRDVPSGHTRDPARGRRLAAAASPHSGGRATPSPNSRLERSL 3293

Query: 396  TRSPDPSH 419
            T S DP H
Sbjct: 3294 TASQDPEH 3301

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>TRA2_DROME (P19018) Transformer-2 sex-determining protein|
          Length = 264

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +3

Query: 219 AAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAA--PPTPRHCSS-STRRRDPS 389
           +AG   + H  + S Y+    R       R++ RSR S+   PP PRH S  S+R R+  
Sbjct: 27  SAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPPPEPRHRSGRSSRDRERM 86

Query: 390 HPTR 401
           H +R
Sbjct: 87  HKSR 90

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>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 27/82 (32%), Positives = 32/82 (39%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRH 356
           PPPP   P  +    + P + S    P R+NS  L  +    VR         APP P  
Sbjct: 251 PPPPYRQPPGVPNGPSSPTNESAPELPQRHNS--LHRKTPGPVR-------GLAPPPPTS 301

Query: 357 CSSSTRRRDPSHPTRSPDPSHG 422
            S S     P  P R P PS G
Sbjct: 302 ASPSLLSNRPPPPARDP-PSRG 322

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>KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC 2.7.11.22)|
           (Cell division cycle 2-like)
          Length = 952

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 6/65 (9%)
 Frame = +3

Query: 231 GHASHHGQPSRYNSSPLRSEPS---HHVRQQLRSRGSAAPPTPRHCSSS---TRRRDPSH 392
           GHA H+ QP +    PL   PS   HH        G+ A P   H   S   +  R   +
Sbjct: 114 GHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQHLSGARAAPREYHSYPSGYHSGSRHGDY 173

Query: 393 PTRSP 407
           P   P
Sbjct: 174 PMEEP 178

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>P73_HUMAN (O15350) Tumor protein p73 (p53-like transcription factor)|
           (p53-related protein)
          Length = 636

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +3

Query: 180 PPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSE-PSHHVRQQLRSRGSAAPPTPRH 356
           PPP  + A   L   GPG  ++HG     ++ P   E  S H  Q + S     PP P H
Sbjct: 434 PPPHSSAATPNLGPVGPGMLNNHG-----HAVPANGEMSSSHSAQSMVSGSHCTPPPPYH 488

Query: 357 CSSS 368
              S
Sbjct: 489 ADPS 492

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 18/45 (40%), Positives = 20/45 (44%)
 Frame = +3

Query: 282 RSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTRSPDPS 416
           R  PS    ++ RS     PP  R   S  RRR PS P R   PS
Sbjct: 541 RRSPSPPPARRRRSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPS 585



 Score = 27.3 bits (59), Expect(2) = 6.0
 Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
 Frame = +3

Query: 255 PSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTR-SPDP 413
           P+R   SP    P    R     R  +  P PR  S S RR  P    R SP P
Sbjct: 548 PARRRRSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSP 601



 Score = 20.8 bits (42), Expect(2) = 6.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 206 PSPMRRRAGTCKPP 247
           PSP RRR     PP
Sbjct: 535 PSPRRRRRSPSPPP 548

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>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2318

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
 Frame = +3

Query: 168  ARVPPPPSYNPAFLLLCAAGPGHASHHGQP--SRYNSSPLRSEPSHHVRQQLRSRGSAAP 341
            AR+PPP    P+FLL  A GP    + G P   +    P  + P H   ++  + G+ + 
Sbjct: 2173 ARLPPPAPPGPSFLLPLAPGP-QLLNPGAPVSPQERPPPYLAAPGH--GEEYPAAGTRSS 2229

Query: 342  PTPRHCSSSTRRRDPSHPTRSPDP 413
            PT     +   R    HP  +P P
Sbjct: 2230 PT----KARFLRVPSEHPYLTPSP 2249

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>PHC2_BRARE (Q8QHL5) Polyhomeotic-like protein 2|
          Length = 827

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 6/35 (17%)
 Frame = +3

Query: 333 AAPPTPRHCSSSTRRRDPSHPTR------SPDPSH 419
           A+  +P++CS+ TR+R+PS  T       SP PSH
Sbjct: 670 ASDESPKNCSTETRKRNPSIQTTTGASLLSPHPSH 704

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>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell|
           protein 0)
          Length = 532

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 255 PSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTRSPDPSHG 422
           P + +S P R+ P    R + R R  AAP      S+  RRR P   +R+    +G
Sbjct: 252 PRQEDSRPARARPGPPTRGRRRGRRPAAPGPASRRSARLRRRQPRTNSRTNGGDNG 307

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>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0|
          Length = 532

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 255 PSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTRSPDPSHG 422
           P + +S P R+ P    R + R R  AAP      S+  RRR P   +R+    +G
Sbjct: 252 PRQEDSRPARARPGPPTRGRRRGRRPAAPGPASRRSARLRRRQPRTNSRTNGGDNG 307

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>IASPP_MOUSE (Q5I1X5) RelA-associated inhibitor (Inhibitor of ASPP protein)|
           (Protein iASPP) (PPP1R13B-like protein)
           (NFkB-interacting protein 1)
          Length = 824

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 24/67 (35%), Positives = 28/67 (41%)
 Frame = +3

Query: 213 LCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSH 392
           L A+G  H +    P  Y  SPL S+    V    RS GSA P      S     R P  
Sbjct: 295 LGASGKDHLTSATLPRNYKVSPLASDRRSDVGSYRRSLGSAGPSGTLPRSWQPVSRIPMP 354

Query: 393 PTRSPDP 413
           P+ SP P
Sbjct: 355 PS-SPQP 360

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>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 26/83 (31%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
 Frame = +3

Query: 174 VPPPPSYNPAFLLLCAAGPGHASHHGQP---SRYNSSPLRSEPSHHVRQQLRSRGSAAPP 344
           VPPPPS N    +     PG  S    P   SR    PL    S  + +  +   S   P
Sbjct: 269 VPPPPSQNSKPPVPSTPRPGAGSQAPPPPPPSRPGPPPLPPTSSDEIPRLPQRNLSLTSP 328

Query: 345 TPRHCSSSTRRRDPSHPTRSPDP 413
           TP   S       P  PT  P P
Sbjct: 329 TPPLPSPGRSGPLPPPPTERPPP 351

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>CD2_HORSE (P37998) T-cell surface antigen CD2 precursor|
          Length = 347

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRH 356
           PPPPS+ P         PGH     +P      PL   P H V+ Q + R +  P T  H
Sbjct: 278 PPPPSHRP-------QAPGH-----RPQVPGHRPL--PPGHRVQHQQQKRPAPTPGTQAH 323

Query: 357 CSSSTRRRDP--SHPTRSPDPSHG 422
                +++ P    P   P P  G
Sbjct: 324 -----QQKGPPLPRPRVQPKPPRG 342

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>BAR2_CHITE (P02851) Balbiani ring protein 2 (Giant secretory protein I-B)|
           (GSP-IB) (Fragment)
          Length = 210

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +3

Query: 228 PGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTR 401
           P   S H +PS+++     S+PS H +    S+ S     P  C S+ +R + +   R
Sbjct: 62  PSKPSKHSKPSKHSKPSKHSKPSKHSKPSKHSKPS-KHSKPEKCGSAMKRTEAAKCAR 118



 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 228 PGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTR 401
           P   S H +PS+++     S+PS H +    S+       P  C S+ +R + +   R
Sbjct: 136 PSKPSKHSKPSKHSKPSKHSKPSKHSKPSKHSK-------PEKCGSAMKRTEAAKCAR 186

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>HXC4_MOUSE (Q08624) Homeobox protein Hox-C4 (Hox-3.5)|
          Length = 264

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAA--GPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTP 350
           PP PSY P     C +  GPG++  HG     +  P +S+P       L    ++  P P
Sbjct: 57  PPRPSY-PERQYSCTSLQGPGNSRAHGPAQAGHHHPEKSQPLCE-PAPLSGTSASPSPAP 114

Query: 351 RHCSSSTRRRDPSHPT 398
             CS       P HP+
Sbjct: 115 PACSQPA----PDHPS 126

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>SWC4_NEUCR (Q870Q1) SWR1-complex protein 4|
          Length = 771

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
 Frame = +3

Query: 174 VPPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRS---RGSAAPP 344
           VPP  S   +   L A+    A+ H +P      P+R  P  H RQ+ RS     S +  
Sbjct: 368 VPPAASRRES---LAASSTAGANDHHEP------PVREPPVRHERQESRSHHRNESRSER 418

Query: 345 TPRHCSSSTRRRD-----PSHPTRSPDP 413
             RH +     RD     P+ P  +P P
Sbjct: 419 ADRHGAHGHHHRDSVSQTPATPAEAPTP 446

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>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2321

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
 Frame = +3

Query: 168  ARVPPPPSYNPAFLLLCAAGPGHASHHGQP--SRYNSSPLRSEPSHHVRQQLRSRGSAAP 341
            AR+PPP    P+FLL  A GP    + G P   +    P  + P H         G   P
Sbjct: 2173 ARLPPPAPPGPSFLLPLAPGP-QLLNPGTPVSPQERPPPYLAVPGH---------GEEYP 2222

Query: 342  PTPRHCSSSTRR--RDPS-HPTRSPDP 413
                H S    R  R PS HP  +P P
Sbjct: 2223 VAGAHSSPPKARFLRVPSEHPYLTPSP 2249

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>NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D) (EB11)
          Length = 1336

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 13/96 (13%)
 Frame = +3

Query: 177  PPPPSYNPAFLLLCAAGPG-HASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPR 353
            PPPP +    L    A  G   SH  +P   + +P  + P HH  ++        PP P 
Sbjct: 1209 PPPPPWAAGPLPRRRARCGCPRSHPHRPRASHRTPAAAAPHHHRHRRAAGGWDLPPPAPT 1268

Query: 354  HCS----SSTRRRDPS--------HPTRSPDPSHGG 425
              S    SS  R  P+        H  R P  +H G
Sbjct: 1269 SRSLEDLSSCPRAAPARRLTGPSRHARRCPHAAHWG 1304

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>EXTN2_ARATH (Q9M1G9) Extensin-2 precursor (AtExt2) (Cell wall|
           hydroxyproline-rich glycoprotein 1) (HRGP1)
          Length = 743

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRH 356
           PPPP Y+P+  ++  + P    ++  P  Y S      PS  V  +       +PP P +
Sbjct: 672 PPPPCYSPSPKVVYKSPPPPYVYNSPPPPYYS------PSPKVYYK-------SPPPPSY 718

Query: 357 CSSSTR--RRDPSHPTRSPDP 413
            S S +   + P  P+ SP P
Sbjct: 719 YSPSPKVEYKSPPPPSYSPSP 739

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>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)|
           (L(1)omb) (Protein bifid)
          Length = 972

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 17/41 (41%), Positives = 17/41 (41%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSH 299
           PPPP Y PA  L   AG     H   P  Y    LR  P H
Sbjct: 240 PPPPPYFPAAALAALAGSPAGPH---PGLYPGGGLRFPPHH 277



 Score = 29.6 bits (65), Expect = 6.4
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 11/90 (12%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHH--VRQQLRSRGSAA---- 338
           P P    P  ++     P   ++    S  NS+   + PSHH        S G+AA    
Sbjct: 156 PSPAGTPPPTIVGLPPIPPPNNNSSSSSSNNSASAAAHPSHHPTAAHHSPSTGAAAPPAG 215

Query: 339 -----PPTPRHCSSSTRRRDPSHPTRSPDP 413
                PPTP H     +++   HP   P P
Sbjct: 216 PTGLPPPTPPH-HLQQQQQQQQHPAPPPPP 244

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +3

Query: 228 PGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPT-PRHCSSSTRRRDPSHPTRS 404
           P   +HH Q       P  S  SHH  Q     G  +PP  P   SSS+ +  PS  TR 
Sbjct: 150 PSAKTHHHQDPPGGGPP--STSSHHHHQDPPGGGPPSPPPRPSTSSSSSHQGPPS--TRP 205

Query: 405 PDP 413
           P P
Sbjct: 206 PPP 208

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>GATA_NEIMB (Q9JYZ9) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 481

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = -1

Query: 311 LPHVVGGLTAQWGGVVAARLAMVACMSRPGGA*EK---ECGVVG 189
           L HV GG +     VVAARLA  A  S  GG+  +    CG+ G
Sbjct: 144 LEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187

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>CVP5_PIMHY (Q8T0W1) Cysteine-rich venom protein 5 precursor|
          Length = 115

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +3

Query: 276 PLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTRSPDPSH 419
           P+ ++P+   +   R+RG     + R  ++ TRR  P++ +R P P+H
Sbjct: 58  PINTQPTRRTQPTRRTRGPKVTRSSRP-TNRTRRPKPTNRSRRPKPTH 104

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>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = +3

Query: 255 PSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTRSPDPS 416
           P R  ++P    P H  + Q  +R    PPTP       R   P+ P   P PS
Sbjct: 182 PGRRANAPPTPLPLHSNKAQAYNREKPLPPTPGQRLHPGREGHPAPPPVKPPPS 235

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>MSH6_SCHPO (O74502) DNA mismatch repair protein msh6|
          Length = 1254

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 17/76 (22%)
 Frame = +3

Query: 219 AAGPGHASHHGQPS---------RYNSSPLR---SEPSHHVRQQLRSRGSAAPPTPRH-- 356
           ++   H S+H  P+         + +SSP R   + PSHH   ++ S  S  PP      
Sbjct: 45  SSSSNHDSNHDTPADVDNSSNVNKNSSSPERELPTSPSHHANTEIDSSSSMLPPPSSDPF 104

Query: 357 ---CSSSTRRRDPSHP 395
               SSS  R  P  P
Sbjct: 105 SSPLSSSLHRSSPKRP 120

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>ECM1_RAT (Q62894) Extracellular matrix protein 1 precursor (Secretory|
           component P85)
          Length = 562

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
 Frame = +3

Query: 201 AFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRR 380
           A +L C A    AS       +  S  R     H+ Q L   G AAPP+P      TRR 
Sbjct: 8   ALILACLALASAASE----GAFKVSDQREMKPEHLFQHLHEVGYAAPPSP----PQTRRL 59

Query: 381 DPSHPTRSP-DP 413
              H   SP DP
Sbjct: 60  QVHHSETSPHDP 71

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>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22|
          Length = 881

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = +3

Query: 219 AAGPGHASHHGQPSRYNS----SPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDP 386
           A G  ++S    P R  +    SP R  P    R    SR S +PP PR+     RRR+ 
Sbjct: 790 ARGRRYSSQSLSPPRRRAERSVSPQRPPPGRRPRGDSLSR-SPSPP-PRYAREQRRRRNS 847

Query: 387 SHPTRSPDPSH 419
           S  + S  P H
Sbjct: 848 SSASASRSPPH 858

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>ADB4C_MELGA (P43141) Beta-4C adrenergic receptor (Beta-4C adrenoceptor)|
           (Beta-4C adrenoreceptor)
          Length = 428

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 333 AAPPTPRHCSSS-TRRRDPSHPTRSPDPSH 419
           AAP  P+HCS + + R DP   +++ DP H
Sbjct: 340 AAPQDPQHCSCAFSPRGDPMEDSKAVDPGH 369

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>PODXL_MOUSE (Q9R0M4) Podocalyxin-like protein 1 precursor|
          Length = 503

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
 Frame = +3

Query: 183 PPSYNPAFLLLCAAGPGHASHHG---QPSRYNSSPLRSEPSHHVRQQL-------RSRGS 332
           PP+   + LLL    P   SH+G     S   SS ++S  S     ++        +  S
Sbjct: 2   PPTTALSALLLLLLSPASHSHNGNETSTSAIKSSTVQSHQSATTSTEVTTGHPVASTLAS 61

Query: 333 AAPPTPRHCSSSTRRRDPSHPTRSPDPS 416
             P  P   ++ST  + PS PT +P+P+
Sbjct: 62  TQPSNPTPFTTST--QSPSMPTSTPNPT 87

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>EXPA_DROME (Q07436) Protein expanded|
          Length = 1427

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/79 (29%), Positives = 31/79 (39%)
 Frame = +3

Query: 177  PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRH 356
            PPPP  +PA L   AA    +S     +R      RS+ +      L  +G   PP P  
Sbjct: 1150 PPPPPLHPAALAAAAAAGAGSSSSSMFAR-----SRSDDNILNSLDLLPKGKRLPPPPPP 1204

Query: 357  CSSSTRRRDPSHPTRSPDP 413
               + R + P  P  S  P
Sbjct: 1205 PYVNRRLKKPPMPAPSEKP 1223

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>BOWEL_DROME (Q9VQU9) Protein bowel (Brother of odd with entrails limited)|
          Length = 744

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 16/61 (26%)
 Frame = +3

Query: 168 ARVPPPPSYNPAFLLLCAAG-----PGHASHHGQPSRYNSSPLRS-----------EPSH 299
           A VPPPP   P  +    +G     P H+ H   PS   S P+R            +P H
Sbjct: 612 AGVPPPPHTPPTIITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILPAPTLDLMDPHH 671

Query: 300 H 302
           H
Sbjct: 672 H 672

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>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2319

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
 Frame = +3

Query: 168  ARVPPPPSYNPAFLLLCAAG------PGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRG 329
            AR+PPP    P+FLL  A G          S H +P  Y ++P                G
Sbjct: 2174 ARLPPPAPPGPSFLLPLAPGSQLLNPATPVSPHERPPPYLAAP--------------GHG 2219

Query: 330  SAAPPTPRHCSSSTRR--RDPS-HPTRSPDP 413
               P    H S +  R  R PS HP  +P P
Sbjct: 2220 EEYPAAGTHSSPTKARFLRVPSEHPYLTPSP 2250

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>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)|
          Length = 841

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
 Frame = +3

Query: 246 HGQP-SRYNSSPLRSEPSHHVRQQLRSRGS----AAPPTPRHCS---SSTRRRDPSHPTR 401
           HGQ  +R +S+P R       + +  S+ S    A PP P  CS   +S  RR    P+ 
Sbjct: 579 HGQNGARGDSAPSRKSQQSQQQPETTSKESSKTAAMPPPPSPCSPSPASRERRPSKSPSS 638

Query: 402 SPDP 413
           SP P
Sbjct: 639 SPRP 642

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>RSP5_YEAST (P39940) E3 ubiquitin--protein ligase RSP5 (EC 6.3.2.-)|
          Length = 809

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 267 NSSPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTR 401
           +SSP    PS H      +  S+   T  H +SSTR    SHP+R
Sbjct: 140 SSSPHSQAPSGHTASS-STNTSSTTRTNGHSTSSTRNHSTSHPSR 183

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>SAS_DROME (Q04164) Putative epidermal cell surface receptor precursor (Stranded|
            at second protein)
          Length = 1693

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 15/96 (15%)
 Frame = +3

Query: 177  PPPPSYNPAFLLLCAAGPGHASH--HGQPSRYNSSPLRSEPSHHVRQQLRSR-------- 326
            P P S +  F +L A  PGH  H  HG P R +    + + +H++  Q+R          
Sbjct: 1089 PVPTSQSDLFNILGAEQPGHPVHPGHGGPPRIHPGQTQKD-NHNLGPQVRIEQILQHLQQ 1147

Query: 327  ---GSAAPPTP--RHCSSSTRRRDPSHPTRSPDPSH 419
               G   PP P  +H S + +            P H
Sbjct: 1148 TVPGGPPPPPPHQQHQSLTPQLHPQQQQISQQHPGH 1183

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>NCOR1_RAT (Q9WUB5) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Fragment)|
          Length = 533

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +3

Query: 228 PGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAP-PTPRHCSSS-TRRRDPSHPTR 401
           P  ++    PS  +S+P+R++PS     + +S+    P P PR    +   +   S P +
Sbjct: 170 PSTSTFQTSPSALSSTPVRTKPSSRYSPESQSQTVLHPRPGPRVSPENLVDKSRGSRPGK 229

Query: 402 SPDPSH 419
           SP+ SH
Sbjct: 230 SPERSH 235

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>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)|
          Length = 515

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +3

Query: 174 VPPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPP-TP 350
           +PPPPS  P  L   A  P     H Q    NSS   + P    +  + S  +AA     
Sbjct: 68  LPPPPS--PGIL---ATSPAVLQKHQQEDSGNSSQSPTSPHPSNQPAMLSPSTAASQHHH 122

Query: 351 RHCSSSTRRRDPSHPTRSPDPS 416
            H SSS+    P+ PT SP  S
Sbjct: 123 HHSSSSSYAVSPTSPT-SPTSS 143

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>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
 Frame = +3

Query: 177  PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQ-----QLRSRGSAAP 341
            PP          L  +GP   +HH  P  ++      +P HH        ++ + GS   
Sbjct: 975  PPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDD 1034

Query: 342  PTPRHCSS------STRRRDPSHPTRSPDPSHGG 425
            P PR            R   PS    +P PSH G
Sbjct: 1035 PPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHG 1068

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>P73_CERAE (Q9XSK8) Tumor protein p73 (p53-like transcription factor)|
           (p53-related protein)
          Length = 637

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +3

Query: 180 PPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSE-PSHHVRQQLRSRGSAAPPTPRH 356
           PPP  + A   L   G G  ++HG     ++ P  SE  S H  Q + S     PP P H
Sbjct: 434 PPPHSSAATPNLGPVGSGMLNNHG-----HAVPANSEMTSSHGTQSMVSGSHCTPPPPYH 488

Query: 357 CSSS 368
              S
Sbjct: 489 ADPS 492

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>YAV1_XANCV (P14727) Hypothetical 122 kDa avirulence protein in avrBs3 region|
          Length = 1164

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
 Frame = +3

Query: 171 RVPPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEP---SHH----------VRQ 311
           R+P PP+ +PAF    A           PS +N+S   S P   +HH          V+ 
Sbjct: 53  RLPSPPAPSPAF---SAGSFSDLLRQFDPSLFNTSLFDSLPPFGAHHTEAATGEWDEVQS 109

Query: 312 QLRSRGSAAPPTPRHCSSSTR--RRDPSHPTRSPDPS 416
            LR+   A PPT R   ++ R  R  P+   R+  PS
Sbjct: 110 GLRA-ADAPPPTMRVAVTAARPPRAKPAPRRRAAQPS 145

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>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)|
          Length = 1287

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 28/82 (34%), Positives = 30/82 (36%)
 Frame = +3

Query: 168  ARVPPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPT 347
            AR P PP      L L   GP  AS        +SSP    P+H      RSR    PP 
Sbjct: 1159 ARRPTPPEPLYVNLALGPRGPSPASSS------SSSP----PAHP-----RSRSDPGPPV 1203

Query: 348  PRHCSSSTRRRDPSHPTRSPDP 413
            PR          P  P R P P
Sbjct: 1204 PRLPQKQRAPWGPRTPHRVPGP 1225

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>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 22/82 (26%), Positives = 27/82 (32%)
 Frame = +3

Query: 177 PPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSAAPPTPRH 356
           PPPP   P        G         PSR+    +   P           G   PP PR+
Sbjct: 301 PPPPGRTPG-----PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRY 355

Query: 357 CSSSTRRRDPSHPTRSPDPSHG 422
            S+      P  P+R P P  G
Sbjct: 356 PSAGPGMYPPPPPSRPPAPPSG 377

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>GLI3_MOUSE (Q61602) Zinc finger protein GLI3|
          Length = 1596

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 291 PSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTR 401
           P  HV ++ R      PP PR   S ++ R P  PT+
Sbjct: 634 PEAHVTKKQRGDMHPRPPPPRDSGSHSQSRSPGRPTQ 670

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>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21|
          Length = 348

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
 Frame = +3

Query: 228 PGHASHHGQPSRYNS---------SPLRSEPSHHVRQQLRSRGSAAPPTPRHCSSSTRRR 380
           P   SH    S Y+S         SPL    S   R + RSR  +   +P   S S+R R
Sbjct: 245 PRTTSHVASYSSYSSRSRSRSRSRSPLSHSRSSRSRSRSRSRSRSRSRSPLSHSRSSRSR 304

Query: 381 DPSHPTRSP 407
            PS  +RSP
Sbjct: 305 SPSR-SRSP 312

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>MKL2_MOUSE (P59759) MKL/myocardin-like protein 2 (Myocardin-related|
           transcription factor B) (MRTF-B)
          Length = 1080

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 312 QLRSRGSAAPPTPRHCSSSTRRRDPSHPTRSPDPSHG 422
           ++  RG   PP P+         DP HP  + DP HG
Sbjct: 586 EVEKRGQQRPPDPQPS-------DPPHPFNTSDPKHG 615

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>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)|
          Length = 606

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 11/71 (15%)
 Frame = +3

Query: 234 HASHHGQPSRYNSSPLRSEPSHHVRQQLR-----------SRGSAAPPTPRHCSSSTRRR 380
           H SHH   +    S   + P+HH                   G+AAPP P H        
Sbjct: 115 HQSHHNNNNHSGGSSGGTSPTHHNNNNGEGFEPPSGGAGAGAGAAAPPPPLH-----HLH 169

Query: 381 DPSHPTRSPDP 413
             SHP   P P
Sbjct: 170 PQSHPHPHPHP 180

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>GLI3_PANTR (Q5IS56) Zinc finger protein GLI3|
          Length = 1580

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 291 PSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTR 401
           P  HV ++ R      PP PR   S ++ R P  PT+
Sbjct: 634 PEAHVTKKQRGDIHPRPPPPRDSGSHSQSRSPGRPTQ 670

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>GLI3_HUMAN (P10071) Zinc finger protein GLI3|
          Length = 1580

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 291 PSHHVRQQLRSRGSAAPPTPRHCSSSTRRRDPSHPTR 401
           P  HV ++ R      PP PR   S ++ R P  PT+
Sbjct: 634 PEAHVTKKQRGDIHPRPPPPRDSGSHSQSRSPGRPTQ 670

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>GATA_NEIMA (Q9JTZ5) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 481

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -1

Query: 305 HVVGGLTAQWGGVVAARLAMVACMSRPGGA*EK---ECGVVG 189
           HV GG +     VVAARLA  A  S  GG+  +    CG+ G
Sbjct: 146 HVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITG 187

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>DEND_RAT (P50617) Dendrin|
          Length = 653

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 22/73 (30%), Positives = 29/73 (39%)
 Frame = +3

Query: 156 PWI*ARVPPPPSYNPAFLLLCAAGPGHASHHGQPSRYNSSPLRSEPSHHVRQQLRSRGSA 335
           PW   R P PPSY    LL  AAG        +P  Y + P    P   +  +     S 
Sbjct: 138 PWG-GRRPGPPSYEAHLLLRGAAGTAPRRRWDRPPPYVAPPSYEGPHRTLGTKRGPELSR 196

Query: 336 APPTPRHCSSSTR 374
           AP +     ++TR
Sbjct: 197 APTSSAPVPATTR 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,572,990
Number of Sequences: 219361
Number of extensions: 1448327
Number of successful extensions: 6004
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 5189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5931
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result