ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart12c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC113007.11| Mus musculus chromosome 3, clone RP23-349H13, co... 44 0.50
2gb|AC103632.8| Mus musculus chromosome 1, clone RP24-555D5, comp... 44 0.50
3gb|AF133093.2| Mus musculus chromosome X clones CT7-116D19, CT7-... 44 0.50
4gb|AC091472.2| Mus musculus chromosome X clones RP21-90B15, RP21... 44 0.50
5gb|AC124373.4| Mus musculus BAC clone RP24-562D16 from chromosom... 44 0.50
6gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosom... 44 0.50
7dbj|AK153710.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 44 0.50
8gb|AC160393.2| Mus musculus BAC clone RP23-136M3 from chromosome... 44 0.50
9gb|AC132414.4| Mus musculus BAC clone RP23-383E9 from 12, comple... 44 0.50
10emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on ch... 44 0.50
11gb|AC111733.5| Rattus norvegicus 13 BAC CH230-170L19 (Children's... 42 2.0
12gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosom... 42 2.0
13gb|AC113084.12| Mus musculus chromosome 1, clone RP23-292F19, co... 42 2.0
14gb|AC164640.4| Mus musculus BAC clone RP23-228M12 from chromosom... 42 2.0
15gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome ... 42 2.0
16gb|AC122358.2| Mus musculus BAC clone RP23-406B6 from chromosome... 42 2.0
17gb|AC107611.6| Rattus norvegicus 10 BAC CH230-195I24 (Children's... 42 2.0
18emb|AL445189.7| Human DNA sequence from clone RP11-249L21 on chr... 42 2.0
19emb|AL669979.13| Mouse DNA sequence from clone RP23-93O11 on chr... 42 2.0
20gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Can... 42 2.0
21gb|AC098838.3| Genomic sequence for Mus musculus, clone RP23-27N... 42 2.0
22gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, compl... 42 2.0
23gb|AC087057.5| Homo sapiens BAC clone RP11-492K24 from 2, comple... 42 2.0
24tpe|BN000728.1| TPA: TPA_exp: Canis familiaris col6a3 gene for c... 42 2.0
25emb|AJ920047.1| Canis familiaris melanophilin gene locus, breed ... 42 2.0
26emb|AL133266.11| Human DNA sequence from clone RP3-397N18 on chr... 42 2.0
27gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, co... 40 7.8
28gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, co... 40 7.8
29gb|AC154737.3| Mus musculus BAC clone RP24-390A6 from chromosome... 40 7.8
30gb|AC156572.3| Mus musculus BAC clone RP23-216C6 from chromosome... 40 7.8
31gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Ca... 40 7.8
32gb|AC124110.8| Mus musculus chromosome 1, clone RP24-343C13, com... 40 7.8
33gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, co... 40 7.8
34gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 7.8
35gb|AC132832.13| Mus musculus chromosome 9, clone RP23-48D19, com... 40 7.8
36gb|AC125583.3| Rattus norvegicus 4 BAC CH230-1A7 (Children's Hos... 40 7.8
37gb|AC147375.3| Mus musculus BAC clone RP24-159O13 from chromosom... 40 7.8
38gb|AC122895.5| Mus musculus BAC clone RP23-69K14 from chromosome... 40 7.8
39gb|AC186169.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 7.8
40ref|XM_978186.1| PREDICTED: Mus musculus protein tyrosine phosph... 40 7.8
41ref|XM_988391.1| PREDICTED: Mus musculus protein tyrosine phosph... 40 7.8
42ref|XM_129443.7| PREDICTED: Mus musculus protein tyrosine phosph... 40 7.8
43gb|AC133077.4| Mus musculus BAC clone RP24-423E10 from chromosom... 40 7.8
44ref|XM_741393.1| Aspergillus fumigatus Af293 patatin-like serine... 40 7.8
45ref|XM_742051.1| Aspergillus fumigatus Af293 cell surface protei... 40 7.8
46gb|AC146199.2| Pan troglodytes BAC clone RP43-25F11 from 7, comp... 40 7.8
47gb|AC123056.4| Mus musculus BAC clone RP23-182H4 from chromosome... 40 7.8
48gb|AC124415.4| Mus musculus BAC clone RP24-298J2 from chromosome... 40 7.8
49gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complet... 40 7.8
50gb|AC034122.12| Mus musculus chromosome 1, clone RP23-169C19, co... 40 7.8
51gb|AC094253.7| Rattus norvegicus 4 BAC CH230-3E12 (Children's Ho... 40 7.8
52emb|AL390994.30| Human DNA sequence from clone RP11-190J18 on ch... 40 7.8
53gb|AC083905.20| Homo sapiens 3 BAC RP11-124N24 (Roswell Park Can... 40 7.8
54emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome... 40 7.8
55emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 7.8
56emb|AL445624.3|HS512L9 Homo sapiens chromosome 9 BAC RP11-512L9,... 40 7.8
57emb|AL611944.10| Mouse DNA sequence from clone RP23-279E14 on ch... 40 7.8
58gb|AC163292.2| Mus musculus BAC clone RP23-241P22 from chromosom... 40 7.8
59gb|AC150032.3| Rhinolophus ferrumequinum clone VMRC7-372J13, com... 40 7.8
60gb|AC114297.2| Homo sapiens chromosome 5 clone RP11-124B7, compl... 40 7.8
61emb|BX470112.27| Zebrafish DNA sequence from clone DKEYP-1B2 in ... 40 7.8
62gb|AC160980.5| Mus musculus BAC clone RP23-386F19 from chromosom... 40 7.8
63dbj|AK171682.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 7.8
64gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosom... 40 7.8
65dbj|AK008468.2| Mus musculus adult male small intestine cDNA, RI... 40 7.8
66gb|AC002472.8| Homo sapiens Chromosome 22q11.2 PAC Clone p_n5 In... 40 7.8
67gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6... 40 7.8
68emb|BX537276.5| Zebrafish DNA sequence from clone DKEYP-57A10 in... 40 7.8
69dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
70gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 7.8
71gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome... 40 7.8
72gb|AC010368.4|AC010368 Homo sapiens chromosome 5 clone CTD-2046J... 40 7.8
73gb|AC073636.4| Homo sapiens BAC clone RP11-279N12 from 2, comple... 40 7.8
74dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, comp... 40 7.8
75dbj|AK173053.1| Mus musculus mRNA for mKIAA0897 protein 40 7.8
76gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Can... 40 7.8
77emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on ch... 40 7.8
78dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
79gb|AC140288.5| Mus musculus BAC clone RP23-348K1 from 14, comple... 40 7.8
80emb|CT009747.19| Mouse DNA sequence from clone RP23-50O6 on chro... 40 7.8
81emb|BX005279.12| Mouse DNA sequence from clone RP23-321B15 on ch... 40 7.8
82emb|AL935029.6| Zebrafish DNA sequence from clone CH211-168J20 i... 40 7.8
83emb|AL773595.10| Mouse DNA sequence from clone RP23-297I16 on ch... 40 7.8
84emb|CT030185.11| Mouse DNA sequence from clone RP23-204L16 on ch... 40 7.8
85gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complet... 40 7.8
86emb|AL845300.11| Mouse DNA sequence from clone RP23-397A17 on ch... 40 7.8
87emb|AL845432.7| Mouse DNA sequence from clone RP23-332H19 on chr... 40 7.8
88emb|AL671878.8| Mouse DNA sequence from clone RP23-184D5 on chro... 40 7.8
89gb|U05581.1|PTU05581 Pan troglodytes class I histocompatibility ... 40 7.8 
>gb|AC113007.11| Mus musculus chromosome 3, clone RP23-349H13, complete sequence
          Length = 180852

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 498   cctcctccttccccttctctgtctcc 523
             ||||||||||| ||||||||||||||
Sbjct: 30118 cctcctccttctccttctctgtctcc 30093
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>gb|AC103632.8| Mus musculus chromosome 1, clone RP24-555D5, complete sequence
          Length = 177269

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 497   ccctcctccttccccttctctgtctc 522
             ||||||||||||||||||||| ||||
Sbjct: 19739 ccctcctccttccccttctctttctc 19764
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>gb|AF133093.2| Mus musculus chromosome X clones CT7-116D19, CT7-309B4, CT7-567G9,
              MGSPI-15528, MGSPI-15530 complete sequence
          Length = 235497

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 490    cagctgcccctcctccttcccc 511
              ||||||||||||||||||||||
Sbjct: 170287 cagctgcccctcctccttcccc 170308
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>gb|AC091472.2| Mus musculus chromosome X clones RP21-90B15, RP21-12I6 complete
             sequence
          Length = 193449

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 490   cagctgcccctcctccttcccc 511
             ||||||||||||||||||||||
Sbjct: 10607 cagctgcccctcctccttcccc 10628
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>gb|AC124373.4| Mus musculus BAC clone RP24-562D16 from chromosome 12, complete
             sequence
          Length = 168916

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 506   ttccccttctctgtctccacagtggt 531
             |||||||||||| |||||||||||||
Sbjct: 33524 ttccccttctctctctccacagtggt 33549
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>gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosome 1, complete sequence
          Length = 167597

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 497   ccctcctccttccccttctctgtctc 522
             ||||||||||||||||||||| ||||
Sbjct: 78885 ccctcctccttccccttctctttctc 78860
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>dbj|AK153710.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630056D15 product:hypothetical protein,
           full insert sequence
          Length = 2811

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 498 cctcctccttccccttctctgtctcc 523
           ||||||||||| ||||||||||||||
Sbjct: 628 cctcctccttctccttctctgtctcc 653
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>gb|AC160393.2| Mus musculus BAC clone RP23-136M3 from chromosome 12, complete sequence
          Length = 215692

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 498   cctcctccttccccttctctgtctcc 523
             |||||||||||||||||||| |||||
Sbjct: 97815 cctcctccttccccttctctttctcc 97790
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>gb|AC132414.4| Mus musculus BAC clone RP23-383E9 from 12, complete sequence
          Length = 185894

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 506    ttccccttctctgtctccacagtggt 531
              |||||||||||| |||||||||||||
Sbjct: 172350 ttccccttctctctctccacagtggt 172375
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>emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on chromosome X, complete
             sequence
          Length = 225712

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 490   cagctgcccctcctccttcccc 511
             ||||||||||||||||||||||
Sbjct: 13883 cagctgcccctcctccttcccc 13904
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>gb|AC111733.5| Rattus norvegicus 13 BAC CH230-170L19 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 138366

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 492   gctgcccctcctccttcccct 512
             |||||||||||||||||||||
Sbjct: 15758 gctgcccctcctccttcccct 15778
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>gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosome 7, complete sequence
          Length = 200592

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 496    cccctcctccttccccttctc 516
              |||||||||||||||||||||
Sbjct: 175502 cccctcctccttccccttctc 175522
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>gb|AC113084.12| Mus musculus chromosome 1, clone RP23-292F19, complete sequence
          Length = 247962

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 496    cccctcctccttccccttctc 516
              |||||||||||||||||||||
Sbjct: 143329 cccctcctccttccccttctc 143349
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>gb|AC164640.4| Mus musculus BAC clone RP23-228M12 from chromosome 7, complete sequence
          Length = 232468

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 496    cccctcctccttccccttctc 516
              |||||||||||||||||||||
Sbjct: 167634 cccctcctccttccccttctc 167614
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>gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome 16, complete sequence
          Length = 216783

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 139    tgttcatccttttctgcccct 159
              |||||||||||||||||||||
Sbjct: 117677 tgttcatccttttctgcccct 117657
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>gb|AC122358.2| Mus musculus BAC clone RP23-406B6 from chromosome 17, complete sequence
          Length = 184952

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 496    cccctcctccttccccttctc 516
              |||||||||||||||||||||
Sbjct: 168697 cccctcctccttccccttctc 168677
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>gb|AC107611.6| Rattus norvegicus 10 BAC CH230-195I24 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 211076

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 497    ccctcctccttccccttctct 517
              |||||||||||||||||||||
Sbjct: 136149 ccctcctccttccccttctct 136129
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>emb|AL445189.7| Human DNA sequence from clone RP11-249L21 on chromosome 6 Contains part
             of a novel gene, a ribosomal protein S12 (RPS12)
             pseudogene, the 5' end of a novel gene,  an  ATP synthase,
             H+ transporting, mitochondrial F0 complex, subunit f,
             isoform 2 (ATP5J2) psuedogene and part of a novel gene,
             complete sequence
          Length = 134566

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 496   cccctcctccttccccttctc 516
             |||||||||||||||||||||
Sbjct: 91665 cccctcctccttccccttctc 91685
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>emb|AL669979.13| Mouse DNA sequence from clone RP23-93O11 on chromosome 11 Contains an H+
              transporting, mitochondria ATP synthase F0 complex subunit
              g (Atp5l) pseudogene, the Peli1 gene for pellino 1, a novel
              pseudogene, a ribosomal protein large P0 (Rplp0)
              pseudogene, the Vps54 gene for vacuolar protein sorting 54
              (yeast), a acyl-Coenzyme A dehydrogenase family (Acad)
              pseudogene and two CpG islands, complete sequence
          Length = 206768

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 496    cccctcctccttccccttctc 516
              |||||||||||||||||||||
Sbjct: 111898 cccctcctccttccccttctc 111878
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>gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186968

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 498   cctcctccttccccttctctgtctc 522
             |||||||||||||||||||| ||||
Sbjct: 17964 cctcctccttccccttctctctctc 17988
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>gb|AC098838.3| Genomic sequence for Mus musculus, clone RP23-27N1, from chromosome 17,
              complete sequence
          Length = 254336

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 496    cccctcctccttccccttctc 516
              |||||||||||||||||||||
Sbjct: 158884 cccctcctccttccccttctc 158904
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>gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, complete sequence
          Length = 163772

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 491   agctgcccctcctccttcccc 511
             |||||||||||||||||||||
Sbjct: 63762 agctgcccctcctccttcccc 63742
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>gb|AC087057.5| Homo sapiens BAC clone RP11-492K24 from 2, complete sequence
          Length = 64674

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 502   ctccttccccttctctgtctc 522
             |||||||||||||||||||||
Sbjct: 18954 ctccttccccttctctgtctc 18974
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>tpe|BN000728.1| TPA: TPA_exp: Canis familiaris col6a3 gene for collagen, type VI,
            alpha 3 and mlph gene for melanophilin
          Length = 212696

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 503  tccttccccttctctgtctcc 523
            |||||||||||||||||||||
Sbjct: 6126 tccttccccttctctgtctcc 6146
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>emb|AJ920047.1| Canis familiaris melanophilin gene locus, breed Doberman
          Length = 197532

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 503  tccttccccttctctgtctcc 523
            |||||||||||||||||||||
Sbjct: 6125 tccttccccttctctgtctcc 6145
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>emb|AL133266.11| Human DNA sequence from clone RP3-397N18 on chromosome 6q21-22.1,
             complete sequence
          Length = 25146

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 496   cccctcctccttccccttctc 516
             |||||||||||||||||||||
Sbjct: 22574 cccctcctccttccccttctc 22594
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>gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, complete sequence
          Length = 180227

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  ccctcctccttccccttctc 516
            ||||||||||||||||||||
Sbjct: 3125 ccctcctccttccccttctc 3144
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>gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, complete sequence
          Length = 201694

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   cctcctccttccccttctct 517
             ||||||||||||||||||||
Sbjct: 43501 cctcctccttccccttctct 43482
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>gb|AC154737.3| Mus musculus BAC clone RP24-390A6 from chromosome 9, complete
            sequence
          Length = 113204

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 496  cccctcctccttccccttct 515
            ||||||||||||||||||||
Sbjct: 9403 cccctcctccttccccttct 9422
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>gb|AC156572.3| Mus musculus BAC clone RP23-216C6 from chromosome 13, complete sequence
          Length = 208578

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    cctcctccttccccttctct 517
              ||||||||||||||||||||
Sbjct: 164495 cctcctccttccccttctct 164476
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>gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 188027

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 498   cctcctccttccccttctctgtct 521
             |||||||||||||| |||||||||
Sbjct: 24535 cctcctccttccccctctctgtct 24558
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>gb|AC124110.8| Mus musculus chromosome 1, clone RP24-343C13, complete sequence
          Length = 149487

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   ttgcagctcttccacgcggc 375
             ||||||||||||||||||||
Sbjct: 35249 ttgcagctcttccacgcggc 35230
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>gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, complete sequence
          Length = 188921

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 496    cccctcctccttccccttct 515
              ||||||||||||||||||||
Sbjct: 119850 cccctcctccttccccttct 119869
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 364    cttccacgcggcgccgcgac 383
              ||||||||||||||||||||
Sbjct: 445153 cttccacgcggcgccgcgac 445172
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>gb|AC132832.13| Mus musculus chromosome 9, clone RP23-48D19, complete sequence
          Length = 230772

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 499   ctcctccttccccttctctgtctc 522
             ||||||||||||||||||| ||||
Sbjct: 97713 ctcctccttccccttctctctctc 97690
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>gb|AC125583.3| Rattus norvegicus 4 BAC CH230-1A7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 205786

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    cctcctccttccccttctct 517
              ||||||||||||||||||||
Sbjct: 117881 cctcctccttccccttctct 117900
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>gb|AC147375.3| Mus musculus BAC clone RP24-159O13 from chromosome 12, complete
             sequence
          Length = 176510

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 499   ctcctccttccccttctctgtctc 522
             ||||||| ||||||||||||||||
Sbjct: 46633 ctcctccctccccttctctgtctc 46656
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>gb|AC122895.5| Mus musculus BAC clone RP23-69K14 from chromosome 18, complete sequence
          Length = 215539

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 496   cccctcctccttccccttct 515
             ||||||||||||||||||||
Sbjct: 37990 cccctcctccttccccttct 38009
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>gb|AC186169.1| Ornithorhynchus anatinus chromosome UNK clone OABb-2K17, complete
             sequence
          Length = 117478

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   ccctcctccttccccttctc 516
             ||||||||||||||||||||
Sbjct: 80269 ccctcctccttccccttctc 80250
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>ref|XM_978186.1| PREDICTED: Mus musculus protein tyrosine phosphatase, receptor
           type, f polypeptide (PTPRF), interacting protein
           (liprin), alpha 4 (Ppfia4), mRNA
          Length = 5465

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 ttgcagctcttccacgcggc 375
           ||||||||||||||||||||
Sbjct: 696 ttgcagctcttccacgcggc 677
to top
>ref|XM_988391.1| PREDICTED: Mus musculus protein tyrosine phosphatase, receptor
           type, f polypeptide (PTPRF), interacting protein
           (liprin), alpha 4 (Ppfia4), mRNA
          Length = 5465

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 ttgcagctcttccacgcggc 375
           ||||||||||||||||||||
Sbjct: 696 ttgcagctcttccacgcggc 677
to top
>ref|XM_129443.7| PREDICTED: Mus musculus protein tyrosine phosphatase, receptor
           type, f polypeptide (PTPRF), interacting protein
           (liprin), alpha 4, transcript variant 1 (Ppfia4), mRNA
          Length = 5465

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 ttgcagctcttccacgcggc 375
           ||||||||||||||||||||
Sbjct: 696 ttgcagctcttccacgcggc 677
to top
>gb|AC133077.4| Mus musculus BAC clone RP24-423E10 from chromosome 12, complete
             sequence
          Length = 183317

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 499   ctcctccttccccttctctgtctc 522
             ||||||| ||||||||||||||||
Sbjct: 95255 ctcctccctccccttctctgtctc 95278
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>ref|XM_741393.1| Aspergillus fumigatus Af293 patatin-like serine hydrolase
           (Afu4g03000) partial mRNA
          Length = 4569

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 502 ctccttccccttctctgtct 521
           ||||||||||||||||||||
Sbjct: 50  ctccttccccttctctgtct 69
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>ref|XM_742051.1| Aspergillus fumigatus Af293 cell surface protein Mas1 (Afu8g00610)
           partial mRNA
          Length = 891

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 77  cccctcttctccggcgcagcgccc 100
           ||||||||||||| ||||||||||
Sbjct: 302 cccctcttctccgtcgcagcgccc 279
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>gb|AC146199.2| Pan troglodytes BAC clone RP43-25F11 from 7, complete sequence
          Length = 186750

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    cctcctccttccccttctct 517
              ||||||||||||||||||||
Sbjct: 121157 cctcctccttccccttctct 121176
to top
>gb|AC123056.4| Mus musculus BAC clone RP23-182H4 from chromosome 13, complete sequence
          Length = 183076

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 65     ccgcaactccaccccctcttctcc 88
              ||||||||||||||||||| ||||
Sbjct: 155999 ccgcaactccaccccctctcctcc 155976
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>gb|AC124415.4| Mus musculus BAC clone RP24-298J2 from chromosome 10, complete sequence
          Length = 160137

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 496   cccctcctccttccccttct 515
             ||||||||||||||||||||
Sbjct: 36139 cccctcctccttccccttct 36158
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>gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complete sequence
          Length = 157928

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 497   ccctcctccttccccttctctgtc 520
             ||||||||||||||| ||||||||
Sbjct: 63623 ccctcctccttccccctctctgtc 63646
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>gb|AC034122.12| Mus musculus chromosome 1, clone RP23-169C19, complete sequence
          Length = 208469

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 497  ccctcctccttccccttctc 516
            ||||||||||||||||||||
Sbjct: 8916 ccctcctccttccccttctc 8897
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>gb|AC094253.7| Rattus norvegicus 4 BAC CH230-3E12 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 209550

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    cctcctccttccccttctct 517
              ||||||||||||||||||||
Sbjct: 209171 cctcctccttccccttctct 209190
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>emb|AL390994.30| Human DNA sequence from clone RP11-190J18 on chromosome 1 Contains the
             5' end of the gene for a novel protein (KIAA1626),
             complete sequence
          Length = 115136

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   cccctacccaccttctccctccgc 123
             ||||| ||||||||||||||||||
Sbjct: 64901 cccctgcccaccttctccctccgc 64924
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>gb|AC083905.20| Homo sapiens 3 BAC RP11-124N24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 109471

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   cctcctccttccccttctct 517
             ||||||||||||||||||||
Sbjct: 50351 cctcctccttccccttctct 50332
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>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13
          Length = 342416

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 364    cttccacgcggcgccgcgac 383
              ||||||||||||||||||||
Sbjct: 103158 cttccacgcggcgccgcgac 103177
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>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14
          Length = 324050

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 364    cttccacgcggcgccgcgac 383
              ||||||||||||||||||||
Sbjct: 103082 cttccacgcggcgccgcgac 103101
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>emb|AL445624.3|HS512L9 Homo sapiens chromosome 9 BAC RP11-512L9, complete sequence
          Length = 179526

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    ctccttccccttctctgtct 521
              ||||||||||||||||||||
Sbjct: 145451 ctccttccccttctctgtct 145432
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>emb|AL611944.10| Mouse DNA sequence from clone RP23-279E14 on chromosome 13 Contains the
              gene for the ortholog of rat and human ubiquinol-cytochrome
              c reductase, Rieske iron-sulfur polypeptide 1 UQCRFS1, a
              novel gene and a CpG island, complete sequence
          Length = 194065

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    ccctggatctaggcgagggt 175
              ||||||||||||||||||||
Sbjct: 125323 ccctggatctaggcgagggt 125304
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>gb|AC163292.2| Mus musculus BAC clone RP23-241P22 from chromosome 13, complete
             sequence
          Length = 208105

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 504   ccttccccttctctgtctcc 523
             ||||||||||||||||||||
Sbjct: 83894 ccttccccttctctgtctcc 83913
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>gb|AC150032.3| Rhinolophus ferrumequinum clone VMRC7-372J13, complete sequence
          Length = 168878

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tgccaccaccaccctcctac 194
             ||||||||||||||||||||
Sbjct: 95387 tgccaccaccaccctcctac 95406
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>gb|AC114297.2| Homo sapiens chromosome 5 clone RP11-124B7, complete sequence
          Length = 158406

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   tcctccttccccttctctgt 519
             ||||||||||||||||||||
Sbjct: 87558 tcctccttccccttctctgt 87577
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>emb|BX470112.27| Zebrafish DNA sequence from clone DKEYP-1B2 in linkage group 12, complete
              sequence
          Length = 155303

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 508    ccccttctctgtctccacagtggt 531
              |||||||| |||||||||||||||
Sbjct: 136570 ccccttctgtgtctccacagtggt 136593
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>gb|AC160980.5| Mus musculus BAC clone RP23-386F19 from chromosome 13, complete
             sequence
          Length = 184857

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 504   ccttccccttctctgtctcc 523
             ||||||||||||||||||||
Sbjct: 52634 ccttccccttctctgtctcc 52615
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>dbj|AK171682.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830003M02 product:ankyrin repeat, family
            A (RFXANK-like), 2, full insert sequence
          Length = 3056

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 65   ccgcaactccaccccctcttctcc 88
            ||||||||||||||||||| ||||
Sbjct: 1132 ccgcaactccaccccctctcctcc 1109
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>gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosome 15, complete sequence
          Length = 213367

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    ccctcctccttccccttctc 516
              ||||||||||||||||||||
Sbjct: 130599 ccctcctccttccccttctc 130580
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>dbj|AK008468.2| Mus musculus adult male small intestine cDNA, RIKEN full-length
           enriched library, clone:2010206P16 product:protein
           translocation complex Sec61 beta chain, endoplasmic
           reticulum homolog [Homo sapiens], full insert sequence
          Length = 1001

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 cttctccctccgcgcctgac 130
           ||||||||||||||||||||
Sbjct: 282 cttctccctccgcgcctgac 301
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>gb|AC002472.8| Homo sapiens Chromosome 22q11.2 PAC Clone p_n5 In BCRL2-GGT Region,
            complete sequence
          Length = 147086

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  ccaccaccaccctcctacaa 196
            ||||||||||||||||||||
Sbjct: 8441 ccaccaccaccctcctacaa 8422
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>gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6 In BCRL2-GGT Region,
              complete sequence
          Length = 235395

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    ccaccaccaccctcctacaa 196
              ||||||||||||||||||||
Sbjct: 199945 ccaccaccaccctcctacaa 199926
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>emb|BX537276.5| Zebrafish DNA sequence from clone DKEYP-57A10 in linkage group 3,
             complete sequence
          Length = 165427

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   cccctcctccttccccttct 515
             ||||||||||||||||||||
Sbjct: 76080 cccctcctccttccccttct 76061
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      cctccgcgcctgaccgccct 136
                ||||||||||||||||||||
Sbjct: 19788068 cctccgcgcctgaccgccct 19788049
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tgccaccaccaccctcctac 194
             ||||||||||||||||||||
Sbjct: 95387 tgccaccaccaccctcctac 95406
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>gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome 18, complete sequence
          Length = 209529

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 496    cccctcctccttccccttct 515
              ||||||||||||||||||||
Sbjct: 164511 cccctcctccttccccttct 164530
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>gb|AC010368.4|AC010368 Homo sapiens chromosome 5 clone CTD-2046J7, complete sequence
          Length = 149307

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   ctgatgttcatccttttctg 154
             ||||||||||||||||||||
Sbjct: 24230 ctgatgttcatccttttctg 24249
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>gb|AC073636.4| Homo sapiens BAC clone RP11-279N12 from 2, complete sequence
          Length = 151018

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   tgcaagccaccatggccaac 255
             ||||||||||||||||||||
Sbjct: 38153 tgcaagccaccatggccaac 38172
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>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     actccaccttcttcctccacgcca 34
              ||||||||||| ||||||||||||
Sbjct: 250903 actccaccttcctcctccacgcca 250880
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>dbj|AK173053.1| Mus musculus mRNA for mKIAA0897 protein
          Length = 5418

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 ttgcagctcttccacgcggc 375
           ||||||||||||||||||||
Sbjct: 654 ttgcagctcttccacgcggc 635
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>gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 151309

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 498   cctcctccttccccttctctgtct 521
             |||||||||||||| |||||||||
Sbjct: 82615 cctcctccttccccctctctgtct 82638
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>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete
              sequence
          Length = 175199

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 499    ctcctccttccccttctctg 518
              ||||||||||||||||||||
Sbjct: 106782 ctcctccttccccttctctg 106801
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0007M04
          Length = 176293

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    cctccgcgcctgaccgccct 136
              ||||||||||||||||||||
Sbjct: 117019 cctccgcgcctgaccgccct 117000
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>gb|AC140288.5| Mus musculus BAC clone RP23-348K1 from 14, complete sequence
          Length = 250519

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 490    cagctgcccctcctccttcccctt 513
              |||||||| |||||||||||||||
Sbjct: 132129 cagctgcctctcctccttcccctt 132152
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>emb|CT009747.19| Mouse DNA sequence from clone RP23-50O6 on chromosome 9, complete
            sequence
          Length = 13988

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 496  cccctcctccttccccttct 515
            ||||||||||||||||||||
Sbjct: 1381 cccctcctccttccccttct 1362
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>emb|BX005279.12| Mouse DNA sequence from clone RP23-321B15 on chromosome X, complete
              sequence
          Length = 222627

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 501    cctccttccccttctctgtc 520
              ||||||||||||||||||||
Sbjct: 171860 cctccttccccttctctgtc 171879
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>emb|AL935029.6| Zebrafish DNA sequence from clone CH211-168J20 in linkage group 1,
             complete sequence
          Length = 157435

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 496   cccctcctccttccccttctctgt 519
             ||||||| ||||||||||||||||
Sbjct: 21262 cccctcccccttccccttctctgt 21285
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>emb|AL773595.10| Mouse DNA sequence from clone RP23-297I16 on chromosome 2, complete
             sequence
          Length = 173925

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 498   cctcctccttccccttctctgtctccac 525
             |||||||||||| ||||||| |||||||
Sbjct: 22083 cctcctccttcctcttctctttctccac 22110
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>emb|CT030185.11| Mouse DNA sequence from clone RP23-204L16 on chromosome 13, complete
             sequence
          Length = 116416

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   cctcctccttccccttctct 517
             ||||||||||||||||||||
Sbjct: 68045 cctcctccttccccttctct 68064
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>gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complete sequence
          Length = 237935

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 497    ccctcctccttccccttctctgtc 520
              ||||||||||||||| ||||||||
Sbjct: 157770 ccctcctccttccccctctctgtc 157793
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>emb|AL845300.11| Mouse DNA sequence from clone RP23-397A17 on chromosome 2, complete
             sequence
          Length = 224818

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   cctcctccttccccttctct 517
             ||||||||||||||||||||
Sbjct: 93954 cctcctccttccccttctct 93973
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>emb|AL845432.7| Mouse DNA sequence from clone RP23-332H19 on chromosome 2, complete
              sequence
          Length = 195835

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    cctcctccttccccttctct 517
              ||||||||||||||||||||
Sbjct: 171610 cctcctccttccccttctct 171591
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>emb|AL671878.8| Mouse DNA sequence from clone RP23-184D5 on chromosome 4, complete
              sequence
          Length = 230395

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    ccctcctccttccccttctc 516
              ||||||||||||||||||||
Sbjct: 139729 ccctcctccttccccttctc 139710
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>gb|U05581.1|PTU05581 Pan troglodytes class I histocompatibility antigen Patr-B
           (Patr-B-08 allele) mRNA, partial cds
          Length = 1065

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 cgccgccgggccgggacatg 237
           ||||||||||||||||||||
Sbjct: 100 cgccgccgggccgggacatg 81


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,262,498
Number of Sequences: 3902068
Number of extensions: 5262498
Number of successful extensions: 132182
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131816
Number of HSP's gapped (non-prelim): 366
length of query: 572
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 549
effective length of database: 17,143,297,704
effective search space: 9411670439496
effective search space used: 9411670439496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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