ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart12c09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467617.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2033 Score = 165 bits (83), Expect = 2e-37 Identities = 98/103 (95%) Strand = Plus / Plus Query: 109 cgccggagcccccgcagctccacggcgtggtcatcatcaccctccctccccccgaccagc 168 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 108 cgccggatccgccgcagctccatggcgtggtcatcatcaccctccctcccccggaccagc 167 Query: 169 cctccaagggcaagaccatcaccgccttcacctacaccgacga 211 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 168 cctccaagggcaagaccatcaccgcgttcacctacaccgacga 210 Score = 127 bits (64), Expect = 4e-26 Identities = 129/150 (86%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 371 cttctactcggacgtggccgtgcagttcctcgggatggaggaggaggaggcgcagaggga 430 ||||||||||||||||||||| |||||| | |||||| ||||||||| |||||| || Sbjct: 388 cttctactcggacgtggccgtccagttcttggggatgcaggaggagg---cgcagaatga 444 Query: 431 gaggaacgagaccaagtcgttcctgttccagctctaccccaaggcgcaccagggccgcgg 490 ||||||||||||||||||||||||| | | ||| ||||||||||| | ||||| |||| Sbjct: 445 gaggaacgagaccaagtcgttcctgctgccgctgtaccccaaggcacggcaggggcgcgc 504 Query: 491 gctgcgggaattcggcgacatcaagctcgc 520 ||||||||| || || |||||||||||||| Sbjct: 505 gctgcgggagtttggagacatcaagctcgc 534
>ref|XM_506955.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0072H09.41 mRNA Length = 2055 Score = 165 bits (83), Expect = 2e-37 Identities = 98/103 (95%) Strand = Plus / Plus Query: 109 cgccggagcccccgcagctccacggcgtggtcatcatcaccctccctccccccgaccagc 168 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 108 cgccggatccgccgcagctccatggcgtggtcatcatcaccctccctcccccggaccagc 167 Query: 169 cctccaagggcaagaccatcaccgccttcacctacaccgacga 211 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 168 cctccaagggcaagaccatcaccgcgttcacctacaccgacga 210 Score = 127 bits (64), Expect = 4e-26 Identities = 129/150 (86%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 371 cttctactcggacgtggccgtgcagttcctcgggatggaggaggaggaggcgcagaggga 430 ||||||||||||||||||||| |||||| | |||||| ||||||||| |||||| || Sbjct: 388 cttctactcggacgtggccgtccagttcttggggatgcaggaggagg---cgcagaatga 444 Query: 431 gaggaacgagaccaagtcgttcctgttccagctctaccccaaggcgcaccagggccgcgg 490 ||||||||||||||||||||||||| | | ||| ||||||||||| | ||||| |||| Sbjct: 445 gaggaacgagaccaagtcgttcctgctgccgctgtaccccaaggcacggcaggggcgcgc 504 Query: 491 gctgcgggaattcggcgacatcaagctcgc 520 ||||||||| || || |||||||||||||| Sbjct: 505 gctgcgggagtttggagacatcaagctcgc 534
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 165 bits (83), Expect = 2e-37 Identities = 98/103 (95%) Strand = Plus / Minus Query: 109 cgccggagcccccgcagctccacggcgtggtcatcatcaccctccctccccccgaccagc 168 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 30459850 cgccggatccgccgcagctccatggcgtggtcatcatcaccctccctcccccggaccagc 30459791 Query: 169 cctccaagggcaagaccatcaccgccttcacctacaccgacga 211 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 30459790 cctccaagggcaagaccatcaccgcgttcacctacaccgacga 30459748 Score = 127 bits (64), Expect = 4e-26 Identities = 129/150 (86%), Gaps = 3/150 (2%) Strand = Plus / Minus Query: 371 cttctactcggacgtggccgtgcagttcctcgggatggaggaggaggaggcgcagaggga 430 ||||||||||||||||||||| |||||| | |||||| ||||||||| |||||| || Sbjct: 30459570 cttctactcggacgtggccgtccagttcttggggatgcaggaggagg---cgcagaatga 30459514 Query: 431 gaggaacgagaccaagtcgttcctgttccagctctaccccaaggcgcaccagggccgcgg 490 ||||||||||||||||||||||||| | | ||| ||||||||||| | ||||| |||| Sbjct: 30459513 gaggaacgagaccaagtcgttcctgctgccgctgtaccccaaggcacggcaggggcgcgc 30459454 Query: 491 gctgcgggaattcggcgacatcaagctcgc 520 ||||||||| || || |||||||||||||| Sbjct: 30459453 gctgcgggagtttggagacatcaagctcgc 30459424 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 35109090 ggaggaggaggaggaggagagggagagg 35109117 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgccccctcctccgccggag 116 |||||||||||||||||||| Sbjct: 6440488 cgccccctcctccgccggag 6440469
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 165 bits (83), Expect = 2e-37 Identities = 98/103 (95%) Strand = Plus / Minus Query: 109 cgccggagcccccgcagctccacggcgtggtcatcatcaccctccctccccccgaccagc 168 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 140710 cgccggatccgccgcagctccatggcgtggtcatcatcaccctccctcccccggaccagc 140651 Query: 169 cctccaagggcaagaccatcaccgccttcacctacaccgacga 211 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 140650 cctccaagggcaagaccatcaccgcgttcacctacaccgacga 140608 Score = 127 bits (64), Expect = 4e-26 Identities = 129/150 (86%), Gaps = 3/150 (2%) Strand = Plus / Minus Query: 371 cttctactcggacgtggccgtgcagttcctcgggatggaggaggaggaggcgcagaggga 430 ||||||||||||||||||||| |||||| | |||||| ||||||||| |||||| || Sbjct: 140430 cttctactcggacgtggccgtccagttcttggggatgcaggaggagg---cgcagaatga 140374 Query: 431 gaggaacgagaccaagtcgttcctgttccagctctaccccaaggcgcaccagggccgcgg 490 ||||||||||||||||||||||||| | | ||| ||||||||||| | ||||| |||| Sbjct: 140373 gaggaacgagaccaagtcgttcctgctgccgctgtaccccaaggcacggcaggggcgcgc 140314 Query: 491 gctgcgggaattcggcgacatcaagctcgc 520 ||||||||| || || |||||||||||||| Sbjct: 140313 gctgcgggagtttggagacatcaagctcgc 140284
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 165 bits (83), Expect = 2e-37 Identities = 98/103 (95%) Strand = Plus / Minus Query: 109 cgccggagcccccgcagctccacggcgtggtcatcatcaccctccctccccccgaccagc 168 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 65898 cgccggatccgccgcagctccatggcgtggtcatcatcaccctccctcccccggaccagc 65839 Query: 169 cctccaagggcaagaccatcaccgccttcacctacaccgacga 211 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 65838 cctccaagggcaagaccatcaccgcgttcacctacaccgacga 65796 Score = 127 bits (64), Expect = 4e-26 Identities = 129/150 (86%), Gaps = 3/150 (2%) Strand = Plus / Minus Query: 371 cttctactcggacgtggccgtgcagttcctcgggatggaggaggaggaggcgcagaggga 430 ||||||||||||||||||||| |||||| | |||||| ||||||||| |||||| || Sbjct: 65618 cttctactcggacgtggccgtccagttcttggggatgcaggaggagg---cgcagaatga 65562 Query: 431 gaggaacgagaccaagtcgttcctgttccagctctaccccaaggcgcaccagggccgcgg 490 ||||||||||||||||||||||||| | | ||| ||||||||||| | ||||| |||| Sbjct: 65561 gaggaacgagaccaagtcgttcctgctgccgctgtaccccaaggcacggcaggggcgcgc 65502 Query: 491 gctgcgggaattcggcgacatcaagctcgc 520 ||||||||| || || |||||||||||||| Sbjct: 65501 gctgcgggagtttggagacatcaagctcgc 65472
>dbj|AK072199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161I06, full insert sequence Length = 2034 Score = 165 bits (83), Expect = 2e-37 Identities = 98/103 (95%) Strand = Plus / Plus Query: 109 cgccggagcccccgcagctccacggcgtggtcatcatcaccctccctccccccgaccagc 168 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 108 cgccggatccgccgcagctccatggcgtggtcatcatcaccctccctcccccggaccagc 167 Query: 169 cctccaagggcaagaccatcaccgccttcacctacaccgacga 211 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 168 cctccaagggcaagaccatcaccgcgttcacctacaccgacga 210 Score = 127 bits (64), Expect = 4e-26 Identities = 129/150 (86%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 371 cttctactcggacgtggccgtgcagttcctcgggatggaggaggaggaggcgcagaggga 430 ||||||||||||||||||||| |||||| | |||||| ||||||||| |||||| || Sbjct: 388 cttctactcggacgtggccgtccagttcttggggatgcaggaggagg---cgcagaatga 444 Query: 431 gaggaacgagaccaagtcgttcctgttccagctctaccccaaggcgcaccagggccgcgg 490 ||||||||||||||||||||||||| | | ||| ||||||||||| | ||||| |||| Sbjct: 445 gaggaacgagaccaagtcgttcctgctgccgctgtaccccaaggcacggcaggggcgcgc 504 Query: 491 gctgcgggaattcggcgacatcaagctcgc 520 ||||||||| || || |||||||||||||| Sbjct: 505 gctgcgggagtttggagacatcaagctcgc 534
>dbj|AK068664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159L17, full insert sequence Length = 2055 Score = 165 bits (83), Expect = 2e-37 Identities = 98/103 (95%) Strand = Plus / Plus Query: 109 cgccggagcccccgcagctccacggcgtggtcatcatcaccctccctccccccgaccagc 168 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 108 cgccggatccgccgcagctccatggcgtggtcatcatcaccctccctcccccggaccagc 167 Query: 169 cctccaagggcaagaccatcaccgccttcacctacaccgacga 211 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 168 cctccaagggcaagaccatcaccgcgttcacctacaccgacga 210 Score = 127 bits (64), Expect = 4e-26 Identities = 129/150 (86%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 371 cttctactcggacgtggccgtgcagttcctcgggatggaggaggaggaggcgcagaggga 430 ||||||||||||||||||||| |||||| | |||||| ||||||||| |||||| || Sbjct: 388 cttctactcggacgtggccgtccagttcttggggatgcaggaggagg---cgcagaatga 444 Query: 431 gaggaacgagaccaagtcgttcctgttccagctctaccccaaggcgcaccagggccgcgg 490 ||||||||||||||||||||||||| | | ||| ||||||||||| | ||||| |||| Sbjct: 445 gaggaacgagaccaagtcgttcctgctgccgctgtaccccaaggcacggcaggggcgcgc 504 Query: 491 gctgcgggaattcggcgacatcaagctcgc 520 ||||||||| || || |||||||||||||| Sbjct: 505 gctgcgggagtttggagacatcaagctcgc 534
>gb|AY106343.1| Zea mays PCO076676 mRNA sequence Length = 1629 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 430 agaggaacgagaccaagtcgttcctgttccagctctaccccaaggcgcaccagggccgcg 489 ||||||||||||||| ||| |||||| | | ||||||||||||||||| |||||||||| Sbjct: 6 agaggaacgagaccaggtctttcctgctgccgctctaccccaaggcgcgtcagggccgcg 65 Query: 490 ggctgcgggaattcggcgacatcaagctcgccgcc 524 ||||| || ||||| ||| |||||||||||||| Sbjct: 66 cactgcgcgagttcggggacgtcaagctcgccgcc 100
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 403 ggatggaggaggaggaggcgcagagggagag 433 |||||||||||||||||||| || ||||||| Sbjct: 119783 ggatggaggaggaggaggcgtagggggagag 119813
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 403 ggatggaggaggaggaggcgcagagggagag 433 |||||||||||||||||||| || ||||||| Sbjct: 109642 ggatggaggaggaggaggcgtagggggagag 109672
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 71 accggagatgccgatgccgttgccgt 96 ||||| |||||||||||||||||||| Sbjct: 1069365 accggcgatgccgatgccgttgccgt 1069340
>ref|XM_959170.1| Neurospora crassa OR74A hypothetical protein (NCU02768.1) partial mRNA Length = 5016 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 405 atggaggaggaggaggcgcagaggga 430 |||||||||||||||| ||||||||| Sbjct: 1684 atggaggaggaggaggtgcagaggga 1709
>ref|XM_329955.1| Neurospora crassa OR74A hypothetical protein (NCU02768.1) partial mRNA Length = 5016 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 405 atggaggaggaggaggcgcagaggga 430 |||||||||||||||| ||||||||| Sbjct: 1684 atggaggaggaggaggtgcagaggga 1709
>emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chromosome 11 Contains a ribosomal protein S2 (Rps2) pseudogene, a novel gene, an apurinic/apyrimidinic endonuclease 2 (Apex2) pseudogene, the Rtn4 gene for reticulon 4, the 3' end of the gene for a novel protein (C230094A16Rik) (MGC38936) and a CpG island, complete sequence Length = 212042 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagaggaa 436 |||||||||||||| ||||||| ||||||| Sbjct: 3765 ggaggaggaggaggagcagaggaagaggaa 3794
>gb|AC008483.7| Homo sapiens chromosome 5 clone CTC-406I6, complete sequence Length = 152533 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagaggaa 436 |||||||||||||| |||||||||||||| Sbjct: 16317 ggaggaggaggagggacagagggagaggaa 16288
>gb|AC154816.2| Mus musculus BAC clone RP24-534N1 from chromosome 13, complete sequence Length = 155476 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagaggaa 436 |||||||||||||| | ||||||||||||| Sbjct: 86408 ggaggaggaggagggggagagggagaggaa 86379
>gb|AC010423.8| Homo sapiens chromosome 5 clone CTD-2193G5, complete sequence Length = 183787 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagaggaa 436 |||||||||||||| |||||||||||||| Sbjct: 78377 ggaggaggaggagggacagagggagaggaa 78406
>emb|AL731734.13| Mouse DNA sequence from clone RP23-26C7 on chromosome 2, complete sequence Length = 88618 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagaggaa 436 |||||||||||||| | ||||||||||||| Sbjct: 50557 ggaggaggaggagggggagagggagaggaa 50528
>ref|XM_450293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 957 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 gggatggaggaggaggaggcg 422 ||||||||||||||||||||| Sbjct: 180 gggatggaggaggaggaggcg 200
>ref|XM_506640.1| PREDICTED Oryza sativa (japonica cultivar-group), B1080A02.31 mRNA Length = 1001 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 gggatggaggaggaggaggcg 422 ||||||||||||||||||||| Sbjct: 195 gggatggaggaggaggaggcg 215
>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence Length = 219117 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggag 431 |||||||||||||| |||||||||| Sbjct: 135512 ggaggaggaggaggagcagagggag 135488
>gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0118N20, complete sequence Length = 146139 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagga 435 |||||||||||||| | |||||||||||| Sbjct: 65036 ggaggaggaggaggtgaagagggagagga 65064
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 gaggaggaggaggcgcagagggagaggaa 436 ||||||||||||||| |||| |||||||| Sbjct: 13774 gaggaggaggaggcggagagcgagaggaa 13746
>gb|AC135430.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0671E09, complete sequence Length = 158472 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagga 435 |||||||||||||| | |||||||||||| Sbjct: 16466 ggaggaggaggaggtgaagagggagagga 16494
>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04, complete sequence Length = 96328 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 gaggaggaggaggcgcagagggagaggaa 436 ||||||||||||||| |||| |||||||| Sbjct: 93720 gaggaggaggaggcggagagcgagaggaa 93692
>emb|AL137798.8| Human DNA sequence from clone RP5-1182A14 on chromosome 1 Contains the 5' end of a novel gene, a novel gene, a macrophage stimulating 1 (hepatocyte growth factor-like)(MST1) pseudogene and three CpG islands, complete sequence Length = 146141 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 404 gatggaggaggaggaggcgcagagg 428 ||||||||||||||||| ||||||| Sbjct: 15802 gatggaggaggaggaggagcagagg 15826
>emb|AL021920.1|HS163M9 Human DNA sequence from clone RP1-163M9 on chromosome 1p35.1-36.21 Contains a novel pseudogene, a eukaryotic translation initiation factor 1A pseudogene 1 (EIF1AP1), part of a novel gene (LOC284729), a macrophage stimulating 1 (hepatocyte growth factor-like)(MST1) pseudogene and five CpG islands, complete sequence Length = 118067 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 404 gatggaggaggaggaggcgcagagg 428 ||||||||||||||||| ||||||| Sbjct: 15365 gatggaggaggaggaggagcagagg 15341
>emb|BX040100.1|CNS0933S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC10CH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1027 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ccgatgccgttgccgtcgccc 101 ||||||||||||||||||||| Sbjct: 402 ccgatgccgttgccgtcgccc 382
>emb|BX040099.1|CNS0933R Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC10CH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1026 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ccgatgccgttgccgtcgccc 101 ||||||||||||||||||||| Sbjct: 741 ccgatgccgttgccgtcgccc 761
>emb|AL035288.1|HS163M094 H.sapiens gene from PAC 163M9, similar to rat Espin gene, partial cds Length = 2015 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 404 gatggaggaggaggaggcgcagagg 428 ||||||||||||||||| ||||||| Sbjct: 1908 gatggaggaggaggaggagcagagg 1932
>gb|AY033236.1| Propionibacterium freudenreichii subsp. shermanii cobalamin biosynthesis locus, partial sequence Length = 11639 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 515 gctcgccgcccagcgggtcga 535 ||||||||||||||||||||| Sbjct: 2708 gctcgccgcccagcgggtcga 2728
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gccgatgccgttgccgtcgcc 100 ||||||||||||||||||||| Sbjct: 3933381 gccgatgccgttgccgtcgcc 3933401
>ref|XM_928757.1| PREDICTED: Homo sapiens espin pseudogene (ESPNP), mRNA Length = 2664 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 404 gatggaggaggaggaggcgcagagg 428 ||||||||||||||||| ||||||| Sbjct: 2541 gatggaggaggaggaggagcagagg 2565
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 gggatggaggaggaggaggcg 422 ||||||||||||||||||||| Sbjct: 3895865 gggatggaggaggaggaggcg 3895885
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 408 gaggaggaggaggcgcagagggagaggaa 436 ||||||||||||||| |||| |||||||| Sbjct: 24327984 gaggaggaggaggcggagagcgagaggaa 24327956 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagga 435 |||||||||||||| | |||||||||||| Sbjct: 13798964 ggaggaggaggaggtgaagagggagagga 13798992
>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1080A02 Length = 151360 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 gggatggaggaggaggaggcg 422 ||||||||||||||||||||| Sbjct: 135381 gggatggaggaggaggaggcg 135401
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0574F11 Length = 159891 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 gggatggaggaggaggaggcg 422 ||||||||||||||||||||| Sbjct: 27377 gggatggaggaggaggaggcg 27397
>dbj|AK104010.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-C07, full insert sequence Length = 957 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 gggatggaggaggaggaggcg 422 ||||||||||||||||||||| Sbjct: 180 gggatggaggaggaggaggcg 200
>dbj|AK061218.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E07, full insert sequence Length = 1001 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 gggatggaggaggaggaggcg 422 ||||||||||||||||||||| Sbjct: 195 gggatggaggaggaggaggcg 215
>emb|AL929241.13| Mouse DNA sequence from clone RP23-4L24 on chromosome 2, complete sequence Length = 168308 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 412 aggaggaggcgcagagggagaggaa 436 |||||||||| |||||||||||||| Sbjct: 118190 aggaggaggcacagagggagaggaa 118166
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 397 tcctcgggatggaggaggaggaggcgcag 425 |||||||||| || ||||||||||||||| Sbjct: 2429977 tcctcgggatcgacgaggaggaggcgcag 2430005
>emb|AL591542.20| Mouse DNA sequence from clone RP23-321M14 on chromosome 2, complete sequence Length = 197190 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagag 427 ||||||||||||||||||||| Sbjct: 36213 ggaggaggaggaggcgcagag 36233
>gb|BT023945.1| Drosophila melanogaster LP02696 full insert cDNA Length = 4316 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 accgacgagccgggcgctgg 223 |||||||||||||||||||| Sbjct: 312 accgacgagccgggcgctgg 293
>ref|XM_483438.1| Oryza sativa (japonica cultivar-group), mRNA Length = 792 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| |||| |||||||| Sbjct: 441 ggaggaggaggaggagcagggggagagg 468
>ref|NM_185013.1| Oryza sativa (japonica cultivar-group), mRNA Length = 333 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 gatggaggaggaggaggcgcagagggag 431 ||||||||||||||||| ||||| |||| Sbjct: 213 gatggaggaggaggaggggcagatggag 240
>ref|XM_468414.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3183 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 57 ggaggaggaggaggaggagagggagagg 30
>ref|XM_468413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2928 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 56 ggaggaggaggaggaggagagggagagg 29
>ref|XM_464640.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2262 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 cgccccctcctccgccggag 116 |||||||||||||||||||| Sbjct: 119 cgccccctcctccgccggag 138
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tcctcgggatggaggaggag 416 |||||||||||||||||||| Sbjct: 1819203 tcctcgggatggaggaggag 1819184
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 gatggaggaggaggaggcgcagagggag 431 ||||||||||||||||| ||||| |||| Sbjct: 50905 gatggaggaggaggaggggcagatggag 50932
>ref|XM_615271.2| PREDICTED: Bos taurus similar to remodeling and spacing factor 1, transcript variant 1 (LOC541248), mRNA Length = 3868 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 ggatggaggaggaggaggcg 422 |||||||||||||||||||| Sbjct: 237 ggatggaggaggaggaggcg 218
>ref|XM_864539.1| PREDICTED: Bos taurus similar to remodeling and spacing factor 1, transcript variant 2 (LOC541248), mRNA Length = 5372 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 ggatggaggaggaggaggcg 422 |||||||||||||||||||| Sbjct: 237 ggatggaggaggaggaggcg 218
>gb|AC147225.3| Mus musculus BAC clone RP23-105L19 from chromosome 6, complete sequence Length = 210239 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 99682 ggaggaggaggaggaggagagggagagg 99655
>ref|XM_323603.1| Neurospora crassa OR74A hypothetical protein ( (AL513462) related to fluG protein [Neurospora crassa OR74A] ) (NCU04264.1) partial mRNA Length = 2697 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ccatcaccgccttcacctac 203 |||||||||||||||||||| Sbjct: 2216 ccatcaccgccttcacctac 2235
>ref|XM_956162.1| Neurospora crassa OR74A hypothetical protein ( (AL513462) related to fluG protein [Neurospora crassa OR74A] ) (NCU04264.1) partial mRNA Length = 2697 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ccatcaccgccttcacctac 203 |||||||||||||||||||| Sbjct: 2216 ccatcaccgccttcacctac 2235
>ref|XM_957445.1| Neurospora crassa OR74A hypothetical protein ( (L36127) repressible high-affinity phosphate permease [Neurospora crassa OR74A] ) (NCU08325.1) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 gaggaggaggcgcagaggga 430 |||||||||||||||||||| Sbjct: 1504 gaggaggaggcgcagaggga 1523
>ref|XM_329030.1| Neurospora crassa OR74A hypothetical protein ( (L36127) repressible high-affinity phosphate permease [Neurospora crassa OR74A] ) (NCU08325.1) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 gaggaggaggcgcagaggga 430 |||||||||||||||||||| Sbjct: 1504 gaggaggaggcgcagaggga 1523
>gb|AC168278.2| Mus musculus BAC RP24-83C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 247493 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 217126 ggaggaggaggaggaggagagggagagg 217153
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gccgcccagcgggtcgatga 538 |||||||||||||||||||| Sbjct: 5240918 gccgcccagcgggtcgatga 5240937
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gccgcccagcgggtcgatga 538 |||||||||||||||||||| Sbjct: 5097231 gccgcccagcgggtcgatga 5097250
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 404 gatggaggaggaggaggcgcagagggag 431 ||||||||||||||||| ||||| |||| Sbjct: 32181368 gatggaggaggaggaggggcagatggag 32181341 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ggatggaggaggaggaggcg 422 |||||||||||||||||||| Sbjct: 1586521 ggatggaggaggaggaggcg 1586540
>gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosome 5, complete sequence Length = 119933 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 105888 ggaggaggaggaggaggagagggagagg 105861
>ref|XM_801375.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508015.50) partial mRNA Length = 825 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||||| |||||||||| Sbjct: 570 ggaggaggaggaggcggcgagggagagg 597
>gb|AC126447.3| Mus musculus BAC clone RP23-352G19 from chromosome 5, complete sequence Length = 196904 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 9241 ggaggaggaggaggaggagagggagagg 9214
>gb|AC122831.2| Mus musculus BAC clone RP23-179B10 from 3, complete sequence Length = 204672 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 408 gaggaggaggaggcgcagagggagagga 435 ||||||||| ||||| |||||||||||| Sbjct: 25746 gaggaggagaaggcgaagagggagagga 25773
>gb|AC121597.2| Mus musculus BAC clone RP23-300D5 from 9, complete sequence Length = 168730 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 117892 ggaggaggaggagggggagagggagagg 117865
>emb|CR680890.2|CNS0FOBQ Tetraodon nigroviridis full-length cDNA Length = 1353 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 865 ggaggaggaggaggaggagagggagagg 892
>gb|AC099603.15| Mus musculus chromosome 12, clone RP23-333M19, complete sequence Length = 206836 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 79320 ggaggaggaggagggggagagggagagg 79293
>emb|CR672039.2|CNS0FHIL Tetraodon nigroviridis full-length cDNA Length = 1332 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 959 ggaggaggaggaggaggagagggagagg 986
>gb|AC166254.5| Mus musculus 6 BAC RP24-409O18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 201023 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 199810 ggaggaggaggaggaggagagggagagg 199783
>gb|AC145394.1| Pan troglodytes BAC clone RP43-83L19 from 7, complete sequence Length = 144147 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tcaccctccctccccccgac 164 |||||||||||||||||||| Sbjct: 29634 tcaccctccctccccccgac 29615
>gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map 17, complete sequence Length = 179382 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 105962 ggaggaggaggaggagaagagggagagg 105935
>emb|BX883043.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 2/11 Length = 347664 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 408 gaggaggaggaggcgcagagggagagga 435 ||||||||||||| ||||||| |||||| Sbjct: 236699 gaggaggaggaggggcagaggtagagga 236672
>emb|AL513462.1|NCB8L3 Neurospora crassa DNA linkage group V BAC contig B8L3 Length = 112716 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ccatcaccgccttcacctac 203 |||||||||||||||||||| Sbjct: 83164 ccatcaccgccttcacctac 83145
>emb|AJ001085.1|TGCRK2 Toxoplasma gondii crk2 gene Length = 3650 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 440 gaccaagtcgttcctgttccagct 463 ||||||||| |||||||||||||| Sbjct: 1237 gaccaagtccttcctgttccagct 1260
>ref|NM_166021.1| Drosophila melanogaster Argonaute 1 CG6671-RC, transcript variant C (AGO1), mRNA Length = 4733 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 accgacgagccgggcgctgg 223 |||||||||||||||||||| Sbjct: 569 accgacgagccgggcgctgg 550
>ref|NM_166020.1| Drosophila melanogaster Argonaute 1 CG6671-RA, transcript variant A (AGO1), mRNA Length = 4476 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 accgacgagccgggcgctgg 223 |||||||||||||||||||| Sbjct: 312 accgacgagccgggcgctgg 293
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gacgagccgggcgctggcgc 226 |||||||||||||||||||| Sbjct: 4440089 gacgagccgggcgctggcgc 4440108
>ref|NM_079010.2| Drosophila melanogaster Argonaute 1 CG6671-RB, transcript variant B (AGO1), mRNA Length = 4576 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 accgacgagccgggcgctgg 223 |||||||||||||||||||| Sbjct: 412 accgacgagccgggcgctgg 393
>gb|AC145871.4| Pan troglodytes BAC clone RP43-6N15 from chromosome 7, complete sequence Length = 230197 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tcaccctccctccccccgac 164 |||||||||||||||||||| Sbjct: 5854 tcaccctccctccccccgac 5873
>gb|AC182812.1| Gasterosteus aculeatus clone VMRC28-91C14, complete sequence Length = 136032 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ggatggaggaggaggaggcg 422 |||||||||||||||||||| Sbjct: 33154 ggatggaggaggaggaggcg 33173
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 404 gatggaggaggaggaggcgcagagggag 431 ||||||||||||||||| ||||| |||| Sbjct: 33042 gatggaggaggaggaggggcagatggag 33015
>gb|AC154198.3| Mus musculus BAC clone RP24-393P24 from chromosome 13, complete sequence Length = 142792 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 109623 ggaggaggaggagggggagagggagagg 109596
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ggatggaggaggaggaggcg 422 |||||||||||||||||||| Sbjct: 66082 ggatggaggaggaggaggcg 66101
>gb|AC007851.6|AC007851 Drosophila melanogaster, chromosome 2R, region 50C-50D, BAC clone BACR06M19, complete sequence Length = 183161 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 accgacgagccgggcgctgg 223 |||||||||||||||||||| Sbjct: 80125 accgacgagccgggcgctgg 80106
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcaga 426 |||||||||||||||||||| Sbjct: 5553272 ggaggaggaggaggcgcaga 5553253
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 gatggaggaggaggaggcgcagagggag 431 ||||||||||||||||| ||||| |||| Sbjct: 9957124 gatggaggaggaggaggggcagatggag 9957151
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| |||| |||||||| Sbjct: 26224897 ggaggaggaggaggagcagggggagagg 26224870
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 404 gatggaggaggaggaggcgcagagggag 431 ||||||||||||||||| ||||| |||| Sbjct: 32271880 gatggaggaggaggaggggcagatggag 32271853 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ggatggaggaggaggaggcg 422 |||||||||||||||||||| Sbjct: 1586519 ggatggaggaggaggaggcg 1586538
>gb|AC153613.9| Mus musculus 10 BAC RP23-23C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214432 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 172213 ggaggaggaggagggggagagggagagg 172186
>gb|AY190942.1| Drosophila pseudoobscura clone DPSF01_33_N22 (D1412) genomic sequence Length = 44139 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gatgccgatgccgttgccgt 96 |||||||||||||||||||| Sbjct: 12604 gatgccgatgccgttgccgt 12623
>gb|DQ163916.1| Bacteriophage M6, complete genome Length = 59446 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tcgccgcccagcgggtcgat 536 |||||||||||||||||||| Sbjct: 36425 tcgccgcccagcgggtcgat 36444
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gccgatgccgttgccgtcgc 99 |||||||||||||||||||| Sbjct: 1824628 gccgatgccgttgccgtcgc 1824647
>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_D05 Length = 128178 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgccccctcctccgccggag 116 |||||||||||||||||||| Sbjct: 82481 cgccccctcctccgccggag 82462
>emb|BX649310.6| Sminthopsis DNA sequence from clone RZPD668-281H15, complete sequence Length = 67497 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 26849 ggaggaggaggagggggagagggagagg 26876
>emb|BX119923.12| Zebrafish DNA sequence from clone CH211-203B17 in linkage group 23, complete sequence Length = 159232 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 atcatcaccctccctccccc 160 |||||||||||||||||||| Sbjct: 103076 atcatcaccctccctccccc 103095
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgccccctcctccgccggag 116 |||||||||||||||||||| Sbjct: 1101 cgccccctcctccgccggag 1082
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 4446 ggaggaggaggaggaggagagggagagg 4473
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 82253 ggaggaggaggaggaggagagggagagg 82280
>gb|AY378484.1| Hepatitis C virus isolate D609-72 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378483.1| Hepatitis C virus isolate D609-68 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378480.1| Hepatitis C virus isolate D609-61 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378475.1| Hepatitis C virus isolate D609-38 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378474.1| Hepatitis C virus isolate D609-34 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378473.1| Hepatitis C virus isolate D609-33 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378472.1| Hepatitis C virus isolate D609-30 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378469.1| Hepatitis C virus isolate D609-26 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378468.1| Hepatitis C virus isolate D609-19 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378466.1| Hepatitis C virus isolate D609-15 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378465.1| Hepatitis C virus isolate D609-11 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378464.1| Hepatitis C virus isolate D609-8 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>gb|AY378461.1| Hepatitis C virus isolate D609-1 NS5A (NS5A) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccccgaccagccctccaa 175 |||||||||||||||||||| Sbjct: 658 ccccccgaccagccctccaa 677
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E06 Length = 112241 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| |||| |||||||| Sbjct: 57822 ggaggaggaggaggagcagggggagagg 57795
>dbj|AK106858.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-B12, full insert sequence Length = 1668 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 cgccccctcctccgccggag 116 |||||||||||||||||||| Sbjct: 277 cgccccctcctccgccggag 296
>dbj|AK100685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113M24, full insert sequence Length = 2928 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 56 ggaggaggaggaggaggagagggagagg 29
>dbj|AK068473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157F01, full insert sequence Length = 3184 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 57 ggaggaggaggaggaggagagggagagg 30
>gb|AC126275.3| Mus musculus BAC clone RP23-111N17 from 14, complete sequence Length = 211542 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| |||||||| |||| Sbjct: 184630 ggaggaggaggaggagcagagggggagg 184603 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| |||||||| |||| Sbjct: 183392 ggaggaggaggaggagcagagggggagg 183365
>gb|AE003816.4| Drosophila melanogaster chromosome 2R, section 34 of 73 of the complete sequence Length = 287287 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 accgacgagccgggcgctgg 223 |||||||||||||||||||| Sbjct: 92115 accgacgagccgggcgctgg 92134
>emb|CT009740.17| Mouse DNA sequence from clone RP23-9N14 on chromosome 12, complete sequence Length = 143996 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 140630 ggaggaggaggagggggagagggagagg 140657
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 gatggaggaggaggaggcgcagagggag 431 ||||||||||||||||| ||||| |||| Sbjct: 10028821 gatggaggaggaggaggggcagatggag 10028848
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcaga 426 |||||||||||||||||||| Sbjct: 10479 ggaggaggaggaggcgcaga 10460
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcaga 426 |||||||||||||||||||| Sbjct: 107902 ggaggaggaggaggcgcaga 107883
>gb|AF042712.1|AF042712 Drosophila pseudoobscura even-skipped (eve) gene, stripe 2 enhancer region Length = 1027 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gatgccgatgccgttgccgt 96 |||||||||||||||||||| Sbjct: 316 gatgccgatgccgttgccgt 335
>gb|AC130831.4| Mus musculus BAC clone RP24-80P9 from 14, complete sequence Length = 233804 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| |||||||| |||| Sbjct: 230220 ggaggaggaggaggagcagagggggagg 230247
>emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in linkage group 9, complete sequence Length = 213486 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 200002 ggaggaggaggaggaggagagggagagg 200029
>gb|AF042172.1|AF042172 Toxoplasma gondii CDC2-like protein kinase TPK2 mRNA, complete cds Length = 2795 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 440 gaccaagtcgttcctgttccagct 463 ||||||||| |||||||||||||| Sbjct: 400 gaccaagtccttcctgttccagct 423
>gb|AC123937.3| Mus musculus BAC clone RP23-408M14 from 6, complete sequence Length = 164294 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 ggaggaggaggaggcgcagagggagagg 434 |||||||||||||| | ||||||||||| Sbjct: 55529 ggaggaggaggaggaggagagggagagg 55502
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cgacatcaagctcgccgccc 525 |||||||||||||||||||| Sbjct: 320211 cgacatcaagctcgccgccc 320192
>gb|AC171110.2| Mus musculus BAC clone RP24-503L4 from chromosome 3, complete sequence Length = 207203 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 408 gaggaggaggaggcgcagagggagagga 435 ||||||||| ||||| |||||||||||| Sbjct: 133490 gaggaggagaaggcgaagagggagagga 133517
>gb|L36127.1|NEURHAPPA Neurospora crassa repressible high-affinity phosphate permease gene, complete cds Length = 2556 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 gaggaggaggcgcagaggga 430 |||||||||||||||||||| Sbjct: 2264 gaggaggaggcgcagaggga 2283
>emb|AJ417841.1|RME417841 Rhododendron metternichii var. hondoense microsatellite DNA, clone RM1D12 Length = 452 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 408 gaggaggaggaggcgcagagggag 431 ||||||||||||||||||| |||| Sbjct: 1 gaggaggaggaggcgcagaaggag 24
>dbj|D83509.1| Rattus norvegicus mRNA for intron 5-inserted form of erythropoietin receptor, complete cds Length = 951 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 cagttcctcgggatggaggaggag 416 |||||||||||| ||||||||||| Sbjct: 746 cagttcctcggggtggaggaggag 769
>dbj|AB035447.1| Drosophila melanogaster dAGO1 mRNA for argonaute protein, complete cds Length = 3586 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 accgacgagccgggcgctgg 223 |||||||||||||||||||| Sbjct: 412 accgacgagccgggcgctgg 393 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,967,214 Number of Sequences: 3902068 Number of extensions: 3967214 Number of successful extensions: 403973 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 400336 Number of HSP's gapped (non-prelim): 3608 length of query: 548 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 525 effective length of database: 17,143,297,704 effective search space: 9000231294600 effective search space used: 9000231294600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
