Clone Name | bart12c04 |
---|---|
Clone Library Name | barley_pub |
>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)| Length = 261 Score = 286 bits (731), Expect = 4e-77 Identities = 140/154 (90%), Positives = 144/154 (93%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF KK WYDIKAP +F RN+GKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA Sbjct: 20 VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 YRKIRLRAEDVQG NVLTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD YMLR+F I Sbjct: 80 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCI 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVN 598 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM N Sbjct: 140 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMAN 173
>RS3A_ARATH (Q42262) 40S ribosomal protein S3a| Length = 261 Score = 276 bits (706), Expect = 3e-74 Identities = 137/154 (88%), Positives = 142/154 (92%) Frame = +2 Query: 134 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 313 AVDPF+KK WYD+KAP FT+RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED Sbjct: 19 AVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDN 78 Query: 314 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFA 493 AYRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD Y LRMF Sbjct: 79 AYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFC 138 Query: 494 IGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMV 595 I FTKRR NQVKRTCYAQ+SQIRQIRRKM EIMV Sbjct: 139 IAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMV 172
>RS3A_HELAN (P49198) 40S ribosomal protein S3a| Length = 259 Score = 272 bits (695), Expect = 6e-73 Identities = 133/154 (86%), Positives = 143/154 (92%) Frame = +2 Query: 134 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 313 A DPF+KK WYDIKAP LF +RNVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQNDED Sbjct: 19 AADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDH 78 Query: 314 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFA 493 +YRKIRLRAEDVQG NVLTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN+ LRMF Sbjct: 79 SYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFC 138 Query: 494 IGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMV 595 IGFTK+R NQVKRTCYAQ+SQI+QIRRKM EIMV Sbjct: 139 IGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMV 172
>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein| BIS289) Length = 261 Score = 269 bits (688), Expect = 4e-72 Identities = 133/153 (86%), Positives = 138/153 (90%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF KK WYDIKAP FT RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADL DEDQA Sbjct: 20 VDPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 YRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDNY LR+F I Sbjct: 80 YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCI 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMV 595 FTKRR NQVKRTCYAQ+SQIRQIR KM EIM+ Sbjct: 140 AFTKRRANQVKRTCYAQSSQIRQIRSKMREIMI 172
>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)| Length = 259 Score = 268 bits (686), Expect = 7e-72 Identities = 130/155 (83%), Positives = 142/155 (91%) Frame = +2 Query: 134 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 313 A DPF KK WYDIKAP +F+ RNVGKTLV+RTQGTKIASEGL+HRVFE+SLADLQ DED Sbjct: 19 AADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDH 78 Query: 314 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFA 493 ++RKIRLRAED+QG NVLTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+Y LRMF Sbjct: 79 SFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFC 138 Query: 494 IGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVN 598 IGFTK+R NQ KRTCYAQ+SQIRQIRRKM EIMVN Sbjct: 139 IGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVN 173
>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector| protein) [Contains: 40S ribosomal protein S3b] Length = 263 Score = 226 bits (575), Expect = 5e-59 Identities = 108/152 (71%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_MOUSE (P97351) 40S ribosomal protein S3a| Length = 263 Score = 226 bits (575), Expect = 5e-59 Identities = 108/152 (71%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_HUMAN (P61247) 40S ribosomal protein S3a| Length = 263 Score = 226 bits (575), Expect = 5e-59 Identities = 108/152 (71%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a| Length = 263 Score = 226 bits (575), Expect = 5e-59 Identities = 108/152 (71%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)| Length = 263 Score = 226 bits (575), Expect = 5e-59 Identities = 108/152 (71%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a| Length = 263 Score = 226 bits (575), Expect = 5e-59 Identities = 108/152 (71%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)| Length = 260 Score = 226 bits (575), Expect = 5e-59 Identities = 108/152 (71%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 18 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 76 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 77 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 136 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 137 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 168
>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector| protein) Length = 265 Score = 225 bits (574), Expect = 7e-59 Identities = 109/152 (71%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQV++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKKRNNQVRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a| Length = 263 Score = 225 bits (573), Expect = 9e-59 Identities = 108/152 (71%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a| Length = 263 Score = 224 bits (572), Expect = 1e-58 Identities = 107/152 (70%), Positives = 129/152 (84%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N L NF GMD T DK+ S+V+KWQT+IEAH+DVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KMVEIM Sbjct: 140 GFTKKRTNQIRKTSYAQHQQVRQIRKKMVEIM 171
>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a| Length = 263 Score = 224 bits (571), Expect = 1e-58 Identities = 108/152 (71%), Positives = 129/152 (84%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM EIM Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMFEIM 171
>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a| Length = 266 Score = 224 bits (571), Expect = 1e-58 Identities = 107/152 (70%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGT+IAS+GLK RVFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a| Length = 263 Score = 224 bits (570), Expect = 2e-58 Identities = 107/152 (70%), Positives = 129/152 (84%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGTKIAS+GLK VFEVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGHVFEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a| Length = 265 Score = 224 bits (570), Expect = 2e-58 Identities = 107/152 (70%), Positives = 130/152 (85%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYD+KAP +F RN+GKTLV+RTQGT+IAS+GLK RV+EVSLADLQNDE A Sbjct: 21 VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVYEVSLADLQNDE-VA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTKRR NQ+++T YAQ Q+RQIR+KM+EIM Sbjct: 140 GFTKRRNNQIRKTSYAQHQQVRQIRKKMMEIM 171
>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)| Length = 264 Score = 221 bits (564), Expect = 9e-58 Identities = 109/152 (71%), Positives = 131/152 (86%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPFTKK+WYD+KAP +F R +GKTLV+R+QGTKIAS+ LK RVFEVSLADLQNDE Sbjct: 21 VDPFTKKEWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDE-VT 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK +L AE+VQG NVLTNF GM T DKL S+V+KWQTLIEA+VDVKTTD Y+LR+FAI Sbjct: 80 FRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAI 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 GFTK+R NQVK+TCYAQ +Q++ IR+KMVEI+ Sbjct: 140 GFTKKRNNQVKKTCYAQHAQVKAIRKKMVEIV 171
>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)| Length = 255 Score = 218 bits (555), Expect = 1e-56 Identities = 101/152 (66%), Positives = 132/152 (86%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPFT+K W+DIKAP F +RNVGKTL++R+ G K A++GLK RVFEV LADLQ ED + Sbjct: 20 VDPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHS 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 YRKI+LR ++VQG N+LTNF G+DFT+DKLRSLVRKWQ+L+EA+V VKT+D+Y+LR+FAI Sbjct: 80 YRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAI 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 FTKR+PNQ+K T YAQ+S++R+ R+KM+EI+ Sbjct: 140 AFTKRQPNQIKETTYAQSSKLREARKKMIEII 171
>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a| Length = 247 Score = 217 bits (552), Expect = 2e-56 Identities = 114/153 (74%), Positives = 125/153 (81%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF+KK WYDIKAP G+ RT GTKIAS+GL RVFEVSLADLQNDEDQA Sbjct: 20 VDPFSKKDWYDIKAPPRSRRARSGRRC-HRTAGTKIASDGLNFRVFEVSLADLQNDEDQA 78 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RKI+LRAEDVQG NVLTNFWGMDFTTDKLRSLVRKWQ+LI+AHVDVKTTDNY +R+F I Sbjct: 79 FRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCI 138 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMV 595 FTK+RPN R YAQ+SQI IRRKM EIMV Sbjct: 139 AFTKKRPNHT-RNFYAQSSQI-AIRRKMREIMV 169
>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)| Length = 254 Score = 206 bits (524), Expect = 4e-53 Identities = 100/152 (65%), Positives = 127/152 (83%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPFT+K+W+DIKAP F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ ED + Sbjct: 20 VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHS 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RKI+LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI Sbjct: 80 FRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAI 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 FT+++ NQVKR YAQ+S IR IR+ + EI+ Sbjct: 140 AFTRKQANQVKRHSYAQSSHIRAIRKVISEIL 171
>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)| Length = 254 Score = 205 bits (522), Expect = 7e-53 Identities = 99/152 (65%), Positives = 127/152 (83%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPFT+K+W+DIKAP F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ ED + Sbjct: 20 VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHS 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK++LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI Sbjct: 80 FRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAI 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 FT+++ NQVKR YAQ+S IR IR+ + EI+ Sbjct: 140 AFTRKQANQVKRHSYAQSSHIRAIRKVISEIL 171
>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)| Length = 251 Score = 204 bits (520), Expect = 1e-52 Identities = 97/154 (62%), Positives = 124/154 (80%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF++K+WYDIKAP F +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ A Sbjct: 20 VDPFSRKEWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHA 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK++LR ED+QG + LT+F G+ T+DKLRSLVRKWQT IEA +KTTD Y+ R+F I Sbjct: 80 FRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLCRVFVI 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVN 598 GFT+RR NQVK+T YAQ+SQIR IR+KM +++ N Sbjct: 140 GFTRRRANQVKKTTYAQSSQIRAIRQKMFQVIQN 173
>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)| Length = 251 Score = 200 bits (509), Expect = 2e-51 Identities = 95/154 (61%), Positives = 122/154 (79%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 VDPF++K WYDIKAP F +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ + Sbjct: 20 VDPFSRKDWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHS 79 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 +RK++LR ED+QG + LT+F G D T+DKLRSLVRKWQ+ IEA+ +KTTD Y+ R+F I Sbjct: 80 FRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVI 139 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVN 598 GFT RR NQVK+T YAQ+SQIR I +KM +++ N Sbjct: 140 GFTSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQN 173
>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)| Length = 268 Score = 200 bits (508), Expect = 3e-51 Identities = 101/154 (65%), Positives = 121/154 (78%), Gaps = 2/154 (1%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED-- 310 VDPFT+K WYD+KAP +F +R GKTLV+RTQGTKIAS+GLK RVFEVSLADLQN+ D Sbjct: 21 VDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAE 80 Query: 311 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMF 490 +++RK +L AE V G +VLTNF GM TTDKLRS+V KWQTLIE VDVKTTD +MLR+F Sbjct: 81 RSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVF 140 Query: 491 AIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 IGFT + ++TCYAQ SQI+ IR KM I+ Sbjct: 141 CIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAII 174
>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)| Length = 267 Score = 197 bits (502), Expect = 1e-50 Identities = 97/156 (62%), Positives = 122/156 (78%), Gaps = 2/156 (1%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED-- 310 VDPF++K WYD+KAP +F +R +GKTLV+RTQG +IAS+ LK RVFEVSLADLQ D D Sbjct: 21 VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPE 80 Query: 311 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMF 490 +++RK RL AEDVQ NVL NF GMD TTDK RS+V+KWQTLIEA V+ KT D Y+LR+F Sbjct: 81 RSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVF 140 Query: 491 AIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVN 598 IGFT + ++TCYAQ SQ+R+IR +M +I+ N Sbjct: 141 CIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITN 176
>RS3A_CAEEL (P48154) 40S ribosomal protein S3a| Length = 256 Score = 195 bits (495), Expect = 9e-50 Identities = 98/150 (65%), Positives = 118/150 (78%) Frame = +2 Query: 134 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 313 AVDPF++K+WYDIKAP +F +R VGKTL++RTQGTKIASEGLK RVFEVSL DL N E Sbjct: 18 AVDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLNNSEAD 77 Query: 314 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFA 493 +RK +L AEDVQG NVLTNF M T DKL S+V+KW TLIEA+ VKTTD Y LR+F Sbjct: 78 -FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFV 136 Query: 494 IGFTKRRPNQVKRTCYAQASQIRQIRRKMV 583 I FTK+ NQVK+T Y + S+IR+IR +M+ Sbjct: 137 IAFTKKSVNQVKKTSYTKTSKIRKIRSEMI 166
>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae| Length = 203 Score = 79.7 bits (195), Expect = 6e-15 Identities = 51/152 (33%), Positives = 82/152 (53%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 +D + K+WY+I+AP+ VG T+ L R E ++ +L ND + Sbjct: 10 LDGWKSKEWYNIEAPVYLNRAIVGNTMAGDPSL-------LVGRNVETTVGELTNDMTKN 62 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 K+ LR +V G T+ G + TTD +RS+V++ + I+A+VDVKT D Y++R+ Sbjct: 63 NTKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIRVKPT 122 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 FT +R A++SQ++ IR MVEI+ Sbjct: 123 CFTIKR---------ARSSQMQAIREMMVEIV 145
>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae| Length = 199 Score = 77.4 bits (189), Expect = 3e-14 Identities = 54/153 (35%), Positives = 73/153 (47%) Frame = +2 Query: 134 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 313 A D + KQWY I AP F VG T E + +RV EV+L D+ D + Sbjct: 11 AKDKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVMNRVVEVTLKDITGDFTK 63 Query: 314 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFA 493 + K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ A Sbjct: 64 GHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMA 123 Query: 494 IGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 + RR Q SQ R IR+ M EI+ Sbjct: 124 MAIAMRR---------IQTSQERAIRKIMQEII 147
>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae| Length = 198 Score = 76.3 bits (186), Expect = 6e-14 Identities = 53/151 (35%), Positives = 73/151 (48%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 319 D + KQWY I AP F VG T E + +RV EV+L D+ D +++ Sbjct: 11 DKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDVTGDFTKSH 63 Query: 320 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIG 499 K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ Sbjct: 64 VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMA 123 Query: 500 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 RR Q SQ R IR+ M EI+ Sbjct: 124 IAMRR---------IQTSQERAIRKIMQEII 145
>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae| Length = 199 Score = 74.7 bits (182), Expect = 2e-13 Identities = 54/153 (35%), Positives = 73/153 (47%) Frame = +2 Query: 134 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 313 A D + KQWY I AP F VG T E + +RV EV+L D+ D + Sbjct: 10 AKDKWKLKQWYVIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDITGDFLK 62 Query: 314 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFA 493 + K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ A Sbjct: 63 GHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMA 122 Query: 494 IGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 + RR Q SQ R IR+ M EI+ Sbjct: 123 MVIAARR---------IQTSQERAIRKIMQEII 146
>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae| Length = 211 Score = 73.9 bits (180), Expect = 3e-13 Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 2/154 (1%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQND--EDQ 313 D +T K+W+ + AP F +G+T +K+ R E +LA+L ND Sbjct: 12 DKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVVG-----RTVETTLAELTNDYSNQN 64 Query: 314 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFA 493 Y+K+ + V G N T FW + T + L SL R+ + IE VDV T D Y LR+ + Sbjct: 65 TYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKS 124 Query: 494 IGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMV 595 + FT RR + SQ R IR M +I+V Sbjct: 125 VVFTVRR---------CKTSQKRAIRAIMRQIVV 149
>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae| Length = 204 Score = 73.9 bits (180), Expect = 3e-13 Identities = 48/152 (31%), Positives = 81/152 (53%) Frame = +2 Query: 137 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 316 +D + K+WY+I+AP VG T+ L R E ++ +L ND + Sbjct: 10 LDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSL-------LVGRNVETTVGELTNDMTKN 62 Query: 317 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 K+ LR +V G T+ G + TTD +RS+V++ + I+A+VDV+T D +++R+ Sbjct: 63 NTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPT 122 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 FT +R A++SQ++ IR MV+I+ Sbjct: 123 CFTIKR---------ARSSQMQAIREMMVDIV 145
>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae| Length = 211 Score = 73.6 bits (179), Expect = 4e-13 Identities = 49/151 (32%), Positives = 76/151 (50%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 319 D + K WY I AP +F + VG+T E + RV E +L D+ +D + + Sbjct: 4 DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56 Query: 320 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIG 499 K+ R DV+G + F G D +RSLVR+ + I+ +DV T D Y +R+ + Sbjct: 57 IKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLA 116 Query: 500 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 FT RR A+ SQ R IR++M +++ Sbjct: 117 FTTRR---------AKTSQQRAIRKEMFKVI 138
>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae| Length = 221 Score = 72.8 bits (177), Expect = 7e-13 Identities = 44/152 (28%), Positives = 77/152 (50%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 319 DP+ K+W+ + AP +G ++ + ++ L R EVSL D+ D Sbjct: 20 DPWALKKWFSVYAPSY-----LGGVFLAEVPANE--AQKLLMRTLEVSLYDITKDISHLP 72 Query: 320 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIG 499 K++ + V+G+ LT F G++ T D +RSLVRK + + A +VKT D ++R+ +G Sbjct: 73 IKLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLG 132 Query: 500 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMV 595 T R +++ +R+KM+E +V Sbjct: 133 ITTHRIGTAQKSA---------MRKKMIETLV 155
>RS3A_METTH (O27630) 30S ribosomal protein S3Ae| Length = 195 Score = 71.6 bits (174), Expect = 2e-12 Identities = 46/149 (30%), Positives = 78/149 (52%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 319 D + +K+WY IK+P LF +G T ++ LK RV E ++ +L D + Y Sbjct: 11 DTWKEKKWYVIKSPKLFGENEIGTT------PSRDPDFLLKRRV-EATMRELTGDFSKQY 63 Query: 320 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIG 499 K++ + + V G T F G TTD +RS++R+ + ++A V V+T D Y L++ + Sbjct: 64 VKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPLA 123 Query: 500 FTKRRPNQVKRTCYAQASQIRQIRRKMVE 586 T RR A++SQ + +R+ + E Sbjct: 124 ITIRR---------AKSSQQKYMRQSIEE 143
>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae| Length = 213 Score = 71.6 bits (174), Expect = 2e-12 Identities = 43/147 (29%), Positives = 75/147 (51%) Frame = +2 Query: 152 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 331 +K+WY ++AP F +GKT + + R E +L +L ND + K+ Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64 Query: 332 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKR 511 + +V + T F + T D LRSLVR+ + +EA++ V TTD+Y +++ + T + Sbjct: 65 FKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTK 124 Query: 512 RPNQVKRTCYAQASQIRQIRRKMVEIM 592 + A ASQ + IRR M++++ Sbjct: 125 K---------ADASQEKAIRRTMIDLV 142
>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae| Length = 200 Score = 68.2 bits (165), Expect = 2e-11 Identities = 47/153 (30%), Positives = 71/153 (46%) Frame = +2 Query: 134 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 313 A D + K+WY + AP F S+ +G T E + RV E +L DL D + Sbjct: 13 AKDKWKMKEWYIVYAPDFFGSKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTK 65 Query: 314 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFA 493 + K+ + DV+G N T F G +RSLVR+ T ++ ++ T D Y LR+ Sbjct: 66 GHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMG 125 Query: 494 IGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM 592 + RR Q SQ R IR+ + +I+ Sbjct: 126 MVIAYRR---------IQTSQERAIRKIIQDII 149
>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae| Length = 193 Score = 65.5 bits (158), Expect = 1e-10 Identities = 43/132 (32%), Positives = 69/132 (52%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 319 D + K+W+ I AP F G+ ++ T A++ L +V E +L DL D Y Sbjct: 9 DKWKLKKWFTIVAPKTF-----GEVVLGTTPAFD-ANQALNRKV-ETTLYDLTGDYSLVY 61 Query: 320 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIG 499 + R V+G +LT F G + + D +RSLVR+ + I+A DV T D Y+LR+ + Sbjct: 62 VHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLA 121 Query: 500 FTKRRPNQVKRT 535 T R ++ ++T Sbjct: 122 LTTYRAHRSQKT 133
>RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae| Length = 225 Score = 65.1 bits (157), Expect = 1e-10 Identities = 41/134 (30%), Positives = 70/134 (52%) Frame = +2 Query: 134 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 313 A D + K WYDI +T ++ G ++ +T A+ L R+ E+SL DL N+ + Sbjct: 15 AKDTWKSKVWYDI-----YTPQSFGGDVIGQTPANDPAN--LIGRISEISLRDLTNEHSK 67 Query: 314 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFA 493 ++ + + V G N + F G D T + L+S VR+ ++ I A V+V+T D + +R+ A Sbjct: 68 HMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKA 127 Query: 494 IGFTKRRPNQVKRT 535 + T R +T Sbjct: 128 LVLTAVRARDHHKT 141
>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae| Length = 197 Score = 63.9 bits (154), Expect = 3e-10 Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 1/150 (0%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 319 D + K+WY I AP +F G+ L+ T I ++ L ++ EV+L DL D + Y Sbjct: 11 DKWKLKKWYVITAPKVF-----GEALLGSTPAYDI-NKALSRKI-EVTLYDLTGDYNLVY 63 Query: 320 RKIRLRA-EDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 496 + + ++ G + T F+G + + D +RSLVR+ + I A VDV T D YMLR+ + Sbjct: 64 IHLYFKILGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGL 123 Query: 497 GFTKRRPNQVKRTCYAQASQIRQIRRKMVE 586 T R + ++T + I I RK E Sbjct: 124 VLTTYRAHISQKTAIRKV--ISDITRKKAE 151
>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae| Length = 221 Score = 61.2 bits (147), Expect = 2e-09 Identities = 43/149 (28%), Positives = 73/149 (48%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 319 D + K+W+ + AP LF G+T++ T + L RV E +L D+ D + Sbjct: 15 DTWRLKKWFKVVAPPLF-----GETVLGTTPADD--PDKLIGRVMETTLFDITGDYSYVH 67 Query: 320 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIG 499 K+ + V+G T F G + D +R L R+ + + +V T D Y LR+ A+ Sbjct: 68 VKMYFQVVRVEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMA 127 Query: 500 FTKRRPNQVKRTCYAQASQIRQIRRKMVE 586 FT++R +Q S IR++ +++VE Sbjct: 128 FTRQRCKT------SQKSAIRKVMQEIVE 150
>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae| Length = 206 Score = 60.5 bits (145), Expect = 4e-09 Identities = 40/147 (27%), Positives = 73/147 (49%) Frame = +2 Query: 152 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 331 +K+WY + AP F +G+TL + + R + +L+D+++ D K+ Sbjct: 12 EKRWYTVLAPEEFDRAELGETLAEEP-------DQVYDRTIQAALSDVRDGGDNNI-KLT 63 Query: 332 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKR 511 + +DV + T F + T D RSLVR+ + + V V TTD+Y +R+ + +T + Sbjct: 64 FQIDDVGSDSASTQFVQAELTRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRIQPVAYTTK 123 Query: 512 RPNQVKRTCYAQASQIRQIRRKMVEIM 592 + +Q SQ IRR M++++ Sbjct: 124 QADQ---------SQQHAIRRTMIDLV 141
>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae| Length = 208 Score = 58.5 bits (140), Expect = 1e-08 Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 3/135 (2%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTL---VSRTQGTKIASEGLKHRVFEVSLADLQNDED 310 D + K+WY + P F ++G T +++T G ++ E +L DL D Sbjct: 10 DKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRV----------ETTLYDLTGDFS 59 Query: 311 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMF 490 Q Y + + +G ++T F G + + D LRSL+R+ + I + DV T D Y++R+ Sbjct: 60 QVYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVK 119 Query: 491 AIGFTKRRPNQVKRT 535 + T + +Q ++T Sbjct: 120 GLVLTTYKCHQSQKT 134
>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae| Length = 215 Score = 50.8 bits (120), Expect = 3e-06 Identities = 38/153 (24%), Positives = 70/153 (45%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 319 + + +K WY ++AP S+ V L S + +RV EV +++L + ++ Sbjct: 12 EKWKEKVWYTVEAPPYLGSKEVSVALGED-------SNSMVNRVVEVPISELTGNFKKSN 64 Query: 320 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIG 499 K R + +G T F G D +R LVR+ + I+ DVKT+DN ++ + + Sbjct: 65 EKALFRITNCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVV 124 Query: 500 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVN 598 T + K+ QIR+ + + ++N Sbjct: 125 VTDGKVTNTKKF---------QIRKVLTDFILN 148
>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae| Length = 215 Score = 44.3 bits (103), Expect = 3e-04 Identities = 30/114 (26%), Positives = 53/114 (46%) Frame = +2 Query: 140 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 319 + + +K WY +++P S+ V L E + +R+ EV ++DL + ++ Sbjct: 12 EKWKEKTWYTVESPPYLGSKEVTVALGEDP-------ESMVNRIVEVPISDLTGNFKKSN 64 Query: 320 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 481 K R +G T F G D +R LVR+ + I+ DVKT+D ++ Sbjct: 65 EKALFRITGCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDGSII 118
>RS3A_NANEQ (Q74N14) 30S ribosomal protein S3Ae| Length = 198 Score = 35.0 bits (79), Expect = 0.16 Identities = 29/128 (22%), Positives = 55/128 (42%) Frame = +2 Query: 152 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 331 +K W+ IKAP +F +G+T + E + R E+++A + N+ K Sbjct: 12 RKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMALVTNNYQLQNYKGI 64 Query: 332 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKR 511 + V+G T G+ ++ V + I +K DN ++R+ + T R Sbjct: 65 FKITKVEGTTAKTELEGIKMYESIIQKWVEPGRDKITDSFVIKDKDNRLVRVKPVLITNR 124 Query: 512 RPNQVKRT 535 R ++ + T Sbjct: 125 RLHRKQGT 132
>MNR2_YEAST (P35724) Manganese resistance protein MNR2| Length = 969 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/68 (26%), Positives = 31/68 (45%) Frame = +2 Query: 185 LFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGMNV 364 + +S N + L+SR+ +A + + + ND + KI + V MNV Sbjct: 871 MVSSLNHYEKLLSRSHSNYLAQ-------INIDMTKVNNDMNDVLGKITILGTIVLPMNV 923 Query: 365 LTNFWGMD 388 +T WGM+ Sbjct: 924 ITGLWGMN 931
>LAT_HUMAN (O43561) Linker for activation of T-cells family member 1 (36 kDa| phospho-tyrosine adapter protein) (pp36) (p36-38) Length = 262 Score = 30.0 bits (66), Expect = 5.3 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -2 Query: 249 EAILVPCVLDTRVLPTLRLVKSSGALMSYHCFLVNGS 139 EAILVPCVL +LP L ++ + + HC + GS Sbjct: 3 EAILVPCVLGLLLLPILAMLMA----LCVHCHRLPGS 35
>SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sulfate| adenylate transferase) (SAT) (ATP-sulfurylase) Length = 437 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 12/57 (21%) Frame = -3 Query: 155 SW*TDPRPSSCYPSS-------PWRCACSCRPPWLPLRVEW-----RRCGGWSGGLR 21 +W T PS+ PSS PWR SCRP L E RR G G LR Sbjct: 298 AWVTTTVPSTPRPSSMTKCQRAPWRSRSSCRPHGLLQEAEQDCDDARRAGSHQGRLR 354
>HYSA_STAAU (Q59801) Hyaluronate lyase precursor (EC 4.2.2.1) (Hyaluronidase)| (HYase) Length = 807 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/108 (20%), Positives = 42/108 (38%) Frame = +2 Query: 152 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 331 KK ++ + ++F + T S+ T I + N ++Q + Sbjct: 565 KKSYFILNDKIVFLGTGIKSTDSSKNPVTTIENRKANGYTLYTDDKQTTNSDNQENNSVF 624 Query: 332 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNY 475 L + D + N+ +F T K S KW+ + ++ D + TD Y Sbjct: 625 LESTDTK-KNIGYHFLNKPKITVKKESHTGKWKEINKSQKDTQKTDEY 671
>RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF| Length = 365 Score = 29.6 bits (65), Expect = 6.9 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%) Frame = -3 Query: 353 LAHPQHGV*SSCRPGPHRSEDQLEILQTP----GASGPLR 246 L P+ SCR GPHR E L++ TP G+SG R Sbjct: 242 LQRPEEERLGSCRVGPHRDEVSLQLGGTPARRFGSSGQQR 281
>LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-binding protein 3| precursor (LTBP-3) Length = 1302 Score = 29.3 bits (64), Expect = 9.0 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 4/26 (15%) Frame = -3 Query: 134 PSSCYPSS----PWRCACSCRPPWLP 69 P++C P P C CRPPW+P Sbjct: 1088 PAACRPGRCVNLPGSYRCECRPPWVP 1113
>AMPN_STRLI (Q11010) Aminopeptidase N (EC 3.4.11.2) (Lysyl aminopeptidase)| (Lys-AP) (Alanine aminopeptidase) Length = 857 Score = 29.3 bits (64), Expect = 9.0 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = +2 Query: 293 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSL--VRKWQTLIEAHVDVKTT 466 L ND+D +Y K+RL D Q + V+T G DFT R+L W +A ++ T Sbjct: 536 LLNDDDLSYAKVRL---DEQSLAVVTEHLG-DFTESLPRALCWASAWDMTRDA--ELATR 589 Query: 467 DNYMLRMFAIG 499 D L + IG Sbjct: 590 DYLALVLSGIG 600 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,815,741 Number of Sequences: 219361 Number of extensions: 1776684 Number of successful extensions: 5426 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 5196 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5393 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)