Clone Name | bart12c02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-c... | 30 | 3.6 | 2 | UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-c... | 30 | 3.6 |
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>UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) Length = 803 Score = 30.4 bits (67), Expect = 3.6 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = -2 Query: 557 CDVAVEHVLAAERRLEVRGRLVALEEGVEGREPEALAVEEGQRLDAV--VVEADPLVGVA 384 CD ++ + AE R G+ V + +GR+ A EEG R D + VV+ P + + Sbjct: 542 CDAPLDDKIGAESRNWRAGKPVRVIRSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSS 601 Query: 383 H 381 H Sbjct: 602 H 602
>UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear zinc finger Length = 802 Score = 30.4 bits (67), Expect = 3.6 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = -2 Query: 557 CDVAVEHVLAAERRLEVRGRLVALEEGVEGREPEALAVEEGQRLDAV--VVEADPLVGVA 384 CD ++ + AE R G+ V + +GR+ A EEG R D + VV+ P + + Sbjct: 541 CDAPLDDKIGAESRNWRAGKPVRVIRSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSS 600 Query: 383 H 381 H Sbjct: 601 H 601 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.289 0.105 0.288 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,373,140 Number of Sequences: 219361 Number of extensions: 569233 Number of successful extensions: 1089 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1068 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1089 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 44 (21.6 bits)