ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart12a04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185698.1| Oryza sativa (japonica cultivar-group), Ozsa8049 predicted mRNA Length = 1065 Score = 377 bits (190), Expect = e-101 Identities = 374/435 (85%), Gaps = 9/435 (2%) Strand = Plus / Plus Query: 148 agggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggccgg 207 ||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| Sbjct: 97 agggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccgg 156 Query: 208 ctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacaccggc 267 || ||||||||||||||||| ||| ||||| || || ||||||||||||| | ||||| Sbjct: 157 ctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccggc 216 Query: 268 aatctccccaaggagatctcggtggacgacaagctgagggacctcggatgcactgggatt 327 ||||| || |||| | | |||||||| |||||||||||| | || ||||||| ||| ||| Sbjct: 217 aatcttccgaaggtgctgtcggtggaggacaagctgaggaatctaggatgcattggaatt 276 Query: 328 gggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtacttg 387 ||||||||||| || ||||| || |||||| || | ||||| |||||||||||||| || Sbjct: 277 gggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtatctg 336 Query: 388 tgggggaatgggactggcggtactggtaccgagggttctgacaggaagaagatccttgcg 447 ||||||||||| ||| | |||||||| ||||||||| ||||||| ||||||| Sbjct: 337 tgggggaatggaact---gctactggta------gttctgacaagaagaagctccttgct 387 Query: 448 gtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgtggctcc 507 || ||||||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 388 gttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggctca 447 Query: 508 tggatgcccagaggtgatgctttaaagaagcttgaggaaaagggtgtggttattcgtttt 567 |||||||| |||||||||||| | |||||||||||||| ||||||||||| ||||||||| Sbjct: 448 tggatgccgagaggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgtttt 507 Query: 568 gttattggccggagt 582 || ||||| |||||| Sbjct: 508 gtcattggtcggagt 522 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 55 atggagacgctggccagcgccatgcggcgcgacaaccgccgcttcaagccccc 107 |||||||||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 1 atggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagccccc 53
>ref|NM_185688.1| Oryza sativa (japonica cultivar-group), Ozsa8039 predicted mRNA Length = 1065 Score = 377 bits (190), Expect = e-101 Identities = 374/435 (85%), Gaps = 9/435 (2%) Strand = Plus / Plus Query: 148 agggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggccgg 207 ||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| Sbjct: 97 agggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccgg 156 Query: 208 ctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacaccggc 267 || ||||||||||||||||| ||| ||||| || || ||||||||||||| | ||||| Sbjct: 157 ctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccggc 216 Query: 268 aatctccccaaggagatctcggtggacgacaagctgagggacctcggatgcactgggatt 327 ||||| || |||| | | |||||||| |||||||||||| | || ||||||| ||| ||| Sbjct: 217 aatcttccgaaggtgctgtcggtggaggacaagctgaggaatctaggatgcattggaatt 276 Query: 328 gggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtacttg 387 ||||||||||| || ||||| || |||||| || | ||||| |||||||||||||| || Sbjct: 277 gggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtatctg 336 Query: 388 tgggggaatgggactggcggtactggtaccgagggttctgacaggaagaagatccttgcg 447 ||||||||||| ||| | |||||||| ||||||||| ||||||| ||||||| Sbjct: 337 tgggggaatggaact---gctactggta------gttctgacaagaagaagctccttgct 387 Query: 448 gtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgtggctcc 507 || ||||||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 388 gttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggctca 447 Query: 508 tggatgcccagaggtgatgctttaaagaagcttgaggaaaagggtgtggttattcgtttt 567 |||||||| |||||||||||| | |||||||||||||| ||||||||||| ||||||||| Sbjct: 448 tggatgccgagaggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgtttt 507 Query: 568 gttattggccggagt 582 || ||||| |||||| Sbjct: 508 gtcattggtcggagt 522 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 55 atggagacgctggccagcgccatgcggcgcgacaaccgccgcttcaagccccc 107 |||||||||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 1 atggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagccccc 53
>emb|AJ506739.1|OSA506739 Oryza sativa mRNA for beta 1,3-glycosyltransferase-like protein II (b3gt2 gene) Length = 1065 Score = 377 bits (190), Expect = e-101 Identities = 374/435 (85%), Gaps = 9/435 (2%) Strand = Plus / Plus Query: 148 agggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggccgg 207 ||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| Sbjct: 97 agggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccgg 156 Query: 208 ctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacaccggc 267 || ||||||||||||||||| ||| ||||| || || ||||||||||||| | ||||| Sbjct: 157 ctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccggc 216 Query: 268 aatctccccaaggagatctcggtggacgacaagctgagggacctcggatgcactgggatt 327 ||||| || |||| | | |||||||| |||||||||||| | || ||||||| ||| ||| Sbjct: 217 aatcttccgaaggtgctgtcggtggaggacaagctgaggaatctaggatgcattggaatt 276 Query: 328 gggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtacttg 387 ||||||||||| || ||||| || |||||| || | ||||| |||||||||||||| || Sbjct: 277 gggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtatctg 336 Query: 388 tgggggaatgggactggcggtactggtaccgagggttctgacaggaagaagatccttgcg 447 ||||||||||| ||| | |||||||| ||||||||| ||||||| ||||||| Sbjct: 337 tgggggaatggaact---gctactggta------gttctgacaagaagaagctccttgct 387 Query: 448 gtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgtggctcc 507 || ||||||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 388 gttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggctca 447 Query: 508 tggatgcccagaggtgatgctttaaagaagcttgaggaaaagggtgtggttattcgtttt 567 |||||||| |||||||||||| | |||||||||||||| ||||||||||| ||||||||| Sbjct: 448 tggatgccgagaggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgtttt 507 Query: 568 gttattggccggagt 582 || ||||| |||||| Sbjct: 508 gtcattggtcggagt 522 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 55 atggagacgctggccagcgccatgcggcgcgacaaccgccgcttcaagccccc 107 |||||||||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 1 atggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagccccc 53
>dbj|AK102880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112G20, full insert sequence Length = 1337 Score = 377 bits (190), Expect = e-101 Identities = 374/435 (85%), Gaps = 9/435 (2%) Strand = Plus / Plus Query: 148 agggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggccgg 207 ||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| Sbjct: 163 agggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccgg 222 Query: 208 ctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacaccggc 267 || ||||||||||||||||| ||| ||||| || || ||||||||||||| | ||||| Sbjct: 223 ctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccggc 282 Query: 268 aatctccccaaggagatctcggtggacgacaagctgagggacctcggatgcactgggatt 327 ||||| || |||| | | |||||||| |||||||||||| | || ||||||| ||| ||| Sbjct: 283 aatcttccgaaggtgctgtcggtggaggacaagctgaggaatctaggatgcattggaatt 342 Query: 328 gggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtacttg 387 ||||||||||| || ||||| || |||||| || | ||||| |||||||||||||| || Sbjct: 343 gggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtatctg 402 Query: 388 tgggggaatgggactggcggtactggtaccgagggttctgacaggaagaagatccttgcg 447 ||||||||||| ||| | |||||||| ||||||||| ||||||| ||||||| Sbjct: 403 tgggggaatggaact---gctactggta------gttctgacaagaagaagctccttgct 453 Query: 448 gtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgtggctcc 507 || ||||||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 454 gttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggctca 513 Query: 508 tggatgcccagaggtgatgctttaaagaagcttgaggaaaagggtgtggttattcgtttt 567 |||||||| |||||||||||| | |||||||||||||| ||||||||||| ||||||||| Sbjct: 514 tggatgccgagaggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgtttt 573 Query: 568 gttattggccggagt 582 || ||||| |||||| Sbjct: 574 gtcattggtcggagt 588 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 51 cgccatggagacgctggccagcgccatgcggcgcgacaaccgccgcttcaagccccc 107 |||||||||||||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 63 cgccatggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagccccc 119
>dbj|AK058356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-E12, full insert sequence Length = 1366 Score = 377 bits (190), Expect = e-101 Identities = 374/435 (85%), Gaps = 9/435 (2%) Strand = Plus / Plus Query: 148 agggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggccgg 207 ||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| Sbjct: 180 agggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccgg 239 Query: 208 ctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacaccggc 267 || ||||||||||||||||| ||| ||||| || || ||||||||||||| | ||||| Sbjct: 240 ctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccggc 299 Query: 268 aatctccccaaggagatctcggtggacgacaagctgagggacctcggatgcactgggatt 327 ||||| || |||| | | |||||||| |||||||||||| | || ||||||| ||| ||| Sbjct: 300 aatcttccgaaggtgctgtcggtggaggacaagctgaggaatctaggatgcattggaatt 359 Query: 328 gggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtacttg 387 ||||||||||| || ||||| || |||||| || | ||||| |||||||||||||| || Sbjct: 360 gggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtatctg 419 Query: 388 tgggggaatgggactggcggtactggtaccgagggttctgacaggaagaagatccttgcg 447 ||||||||||| ||| | |||||||| ||||||||| ||||||| ||||||| Sbjct: 420 tgggggaatggaact---gctactggta------gttctgacaagaagaagctccttgct 470 Query: 448 gtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgtggctcc 507 || ||||||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 471 gttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggctca 530 Query: 508 tggatgcccagaggtgatgctttaaagaagcttgaggaaaagggtgtggttattcgtttt 567 |||||||| |||||||||||| | |||||||||||||| ||||||||||| ||||||||| Sbjct: 531 tggatgccgagaggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgtttt 590 Query: 568 gttattggccggagt 582 || ||||| |||||| Sbjct: 591 gtcattggtcggagt 605 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 51 cgccatggagacgctggccagcgccatgcggcgcgacaaccgccgcttcaagccccc 107 |||||||||||||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 80 cgccatggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagccccc 136
>emb|AJ506740.2|OSA506740 Oryza sativa partial mRNA for beta 1,3-glycosyltransferase-like protein II (b3gt2 gene), alternatively spliced Length = 987 Score = 319 bits (161), Expect = 6e-84 Identities = 333/390 (85%), Gaps = 9/390 (2%) Strand = Plus / Plus Query: 193 tacgtcgccggccggctatggcaggacgcgcagacccgggccatcctctccggcctcctc 252 ||||||||||||||||| ||||||||||||||||| ||| ||||| || || |||||| Sbjct: 13 tacgtcgccggccggctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctc 72 Query: 253 gagaagaacaccggcaatctccccaaggagatctcggtggacgacaagctgagggacctc 312 ||||||| | |||||||||| || |||| | | |||||||| |||||||||||| | || Sbjct: 73 gagaagagctccggcaatcttccgaaggtgctgtcggtggaggacaagctgaggaatcta 132 Query: 313 ggatgcactgggattgggaggaagatcgccgaggcggagatggacattgccaaggccaag 372 ||||||| ||| |||||||||||||| || ||||| || |||||| || | ||||| ||| Sbjct: 133 ggatgcattggaattgggaggaagattgcggaggcagaaatggaccttacaaaggcgaag 192 Query: 373 agcgaggggtacttgtgggggaatgggactggcggtactggtaccgagggttctgacagg 432 ||||||||||| ||||||||||||| |||| |||||||| ||||||||| | Sbjct: 193 agcgaggggtatctgtgggggaatggaactgc---tactggta------gttctgacaag 243 Query: 433 aagaagatccttgcggtcattggagtttacactggcttcggctcccggctcaagaggaac 492 |||||| ||||||| || ||||||||||||||||| || || |||||||||||||||||| Sbjct: 244 aagaagctccttgctgttattggagtttacactggttttggttcccggctcaagaggaac 303 Query: 493 accttccgtggctcctggatgcccagaggtgatgctttaaagaagcttgaggaaaagggt 552 |||||||||||||| |||||||| |||||||||||| | |||||||||||||| |||||| Sbjct: 304 accttccgtggctcatggatgccgagaggtgatgctctgaagaagcttgaggagaagggt 363 Query: 553 gtggttattcgttttgttattggccggagt 582 ||||| ||||||||||| ||||| |||||| Sbjct: 364 gtggtcattcgttttgtcattggtcggagt 393
>gb|AY104468.1| Zea mays PCO120622 mRNA sequence Length = 1455 Score = 204 bits (103), Expect = 2e-49 Identities = 214/251 (85%) Strand = Plus / Plus Query: 145 ggcagggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggc 204 ||||||||||| |||||||||||||||||| |||||||||||||| | |||||||||||| Sbjct: 214 ggcagggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggc 273 Query: 205 cggctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacacc 264 || | ||||||||||||||||||||||| ||||| ||||||||||||||||||| | | Sbjct: 274 cgtttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagagctct 333 Query: 265 ggcaatctccccaaggagatctcggtggacgacaagctgagggacctcggatgcactggg 324 || |||| |||| | |||||||||| |||||||| ||| |||| || |||| | | Sbjct: 334 accagcgtcccgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaaggcg 393 Query: 325 attgggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtac 384 ||||| ||||| || | ||||||||||||||| | ||||||||||||||||||||||| Sbjct: 394 attggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggggtac 453 Query: 385 ttgtgggggaa 395 |||||||||| Sbjct: 454 ctgtgggggaa 464 Score = 184 bits (93), Expect = 2e-43 Identities = 129/141 (91%) Strand = Plus / Plus Query: 442 cttgcggtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgt 501 ||||| |||||||||||||||||||| || |||||||| |||||||||||| ||||||| Sbjct: 505 cttgccgtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgt 564 Query: 502 ggctcctggatgcccagaggtgatgctttaaagaagcttgaggaaaagggtgtggttatt 561 |||||||||||||| |||||||||||| | ||||||||||||||||||||||| | |||| Sbjct: 565 ggctcctggatgccaagaggtgatgctctgaagaagcttgaggaaaagggtgtagctatt 624 Query: 562 cgttttgttattggccggagt 582 |||||||||||||| |||||| Sbjct: 625 cgttttgttattggtcggagt 645 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 48 cgccgccatggagacgctggccagcgccatgcggcgcgacaaccgccgcttcaagccccc 107 ||||||||||||||||||||||||||||||||||||||| |||||||| | |||| |||| Sbjct: 120 cgccgccatggagacgctggccagcgccatgcggcgcgagaaccgccggtccaaggcccc 179 Query: 108 g 108 | Sbjct: 180 g 180
>gb|BT017450.1| Zea mays clone EL01N0406E03.c mRNA sequence Length = 1140 Score = 198 bits (100), Expect = 1e-47 Identities = 211/248 (85%) Strand = Plus / Plus Query: 148 agggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggccgg 207 |||||||| |||||||||||||||||| |||||||||||||| | |||||||||||||| Sbjct: 6 agggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccgt 65 Query: 208 ctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacaccggc 267 | ||||||||||||||||||||||| ||||| ||||||||||||||||||| | | | Sbjct: 66 ttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagagctctacc 125 Query: 268 aatctccccaaggagatctcggtggacgacaagctgagggacctcggatgcactgggatt 327 | |||| |||| | |||||||||| |||||||| ||| |||| || |||| | |||| Sbjct: 126 agcgtcccgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaaggcgatt 185 Query: 328 gggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtacttg 387 || ||||| || | ||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 186 ggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggggtacctg 245 Query: 388 tgggggaa 395 |||||||| Sbjct: 246 tgggggaa 253 Score = 184 bits (93), Expect = 2e-43 Identities = 129/141 (91%) Strand = Plus / Plus Query: 442 cttgcggtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgt 501 ||||| |||||||||||||||||||| || |||||||| |||||||||||| ||||||| Sbjct: 294 cttgccgtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgt 353 Query: 502 ggctcctggatgcccagaggtgatgctttaaagaagcttgaggaaaagggtgtggttatt 561 |||||||||||||| |||||||||||| | ||||||||||||||||||||||| | |||| Sbjct: 354 ggctcctggatgccaagaggtgatgctctgaagaagcttgaggaaaagggtgtagctatt 413 Query: 562 cgttttgttattggccggagt 582 |||||||||||||| |||||| Sbjct: 414 cgttttgttattggtcggagt 434
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 153 bits (77), Expect = 8e-34 Identities = 168/198 (84%), Gaps = 9/198 (4%) Strand = Plus / Plus Query: 325 attgggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtac 384 |||||||||||||| || ||||| || |||||| || | ||||| |||||||||||||| Sbjct: 3878397 attgggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtat 3878456 Query: 385 ttgtgggggaatgggactggcggtactggtaccgagggttctgacaggaagaagatcctt 444 ||||||||||||| |||| |||||||| ||||||||| ||||||| ||||| Sbjct: 3878457 ctgtgggggaatggaactgc---tactggta------gttctgacaagaagaagctcctt 3878507 Query: 445 gcggtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgtggc 504 || || ||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 3878508 gctgttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggc 3878567 Query: 505 tcctggatgcccagaggt 522 || |||||||| |||||| Sbjct: 3878568 tcatggatgccgagaggt 3878585 Score = 153 bits (77), Expect = 8e-34 Identities = 168/198 (84%), Gaps = 9/198 (4%) Strand = Plus / Plus Query: 325 attgggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtac 384 |||||||||||||| || ||||| || |||||| || | ||||| |||||||||||||| Sbjct: 3840341 attgggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtat 3840400 Query: 385 ttgtgggggaatgggactggcggtactggtaccgagggttctgacaggaagaagatcctt 444 ||||||||||||| |||| |||||||| ||||||||| ||||||| ||||| Sbjct: 3840401 ctgtgggggaatggaactgc---tactggta------gttctgacaagaagaagctcctt 3840451 Query: 445 gcggtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgtggc 504 || || ||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 3840452 gctgttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggc 3840511 Query: 505 tcctggatgcccagaggt 522 || |||||||| |||||| Sbjct: 3840512 tcatggatgccgagaggt 3840529 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 51 cgccatggagacgctggccagcgccatgcggcgcgacaaccgccgcttcaagccccc 107 |||||||||||||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 3877859 cgccatggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagccccc 3877915 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 51 cgccatggagacgctggccagcgccatgcggcgcgacaaccgccgcttcaagccccc 107 |||||||||||||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 3839803 cgccatggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagccccc 3839859 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 148 agggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggccgg 207 ||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| Sbjct: 3877959 agggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccgg 3878018 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 148 agggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggccgg 207 ||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| Sbjct: 3839903 agggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccgg 3839962 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 519 aggtgatgctttaaagaagcttgaggaaaagggtgtggttattcgttttgttattggccg 578 |||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||||| || Sbjct: 3878765 aggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgttttgtcattggtcg 3878824 Query: 579 gag 581 ||| Sbjct: 3878825 gag 3878827 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 519 aggtgatgctttaaagaagcttgaggaaaagggtgtggttattcgttttgttattggccg 578 |||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||||| || Sbjct: 3840709 aggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgttttgtcattggtcg 3840768 Query: 579 gag 581 ||| Sbjct: 3840769 gag 3840771 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 206 ggctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacaccg 265 |||| ||||||||||||||||| ||| ||||| || || ||||||||||||| | ||| Sbjct: 3878105 ggctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccg 3878164 Query: 266 gcaat 270 ||||| Sbjct: 3878165 gcaat 3878169 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 206 ggctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacaccg 265 |||| ||||||||||||||||| ||| ||||| || || ||||||||||||| | ||| Sbjct: 3840049 ggctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccg 3840108 Query: 266 gcaat 270 ||||| Sbjct: 3840109 gcaat 3840113
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 153 bits (77), Expect = 8e-34 Identities = 168/198 (84%), Gaps = 9/198 (4%) Strand = Plus / Plus Query: 325 attgggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtac 384 |||||||||||||| || ||||| || |||||| || | ||||| |||||||||||||| Sbjct: 136351 attgggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtat 136410 Query: 385 ttgtgggggaatgggactggcggtactggtaccgagggttctgacaggaagaagatcctt 444 ||||||||||||| |||| |||||||| ||||||||| ||||||| ||||| Sbjct: 136411 ctgtgggggaatggaactgc---tactggta------gttctgacaagaagaagctcctt 136461 Query: 445 gcggtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgtggc 504 || || ||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 136462 gctgttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggc 136521 Query: 505 tcctggatgcccagaggt 522 || |||||||| |||||| Sbjct: 136522 tcatggatgccgagaggt 136539 Score = 153 bits (77), Expect = 8e-34 Identities = 168/198 (84%), Gaps = 9/198 (4%) Strand = Plus / Plus Query: 325 attgggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgaggggtac 384 |||||||||||||| || ||||| || |||||| || | ||||| |||||||||||||| Sbjct: 98295 attgggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtat 98354 Query: 385 ttgtgggggaatgggactggcggtactggtaccgagggttctgacaggaagaagatcctt 444 ||||||||||||| |||| |||||||| ||||||||| ||||||| ||||| Sbjct: 98355 ctgtgggggaatggaactgc---tactggta------gttctgacaagaagaagctcctt 98405 Query: 445 gcggtcattggagtttacactggcttcggctcccggctcaagaggaacaccttccgtggc 504 || || ||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 98406 gctgttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggc 98465 Query: 505 tcctggatgcccagaggt 522 || |||||||| |||||| Sbjct: 98466 tcatggatgccgagaggt 98483 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 51 cgccatggagacgctggccagcgccatgcggcgcgacaaccgccgcttcaagccccc 107 |||||||||||||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 135813 cgccatggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagccccc 135869 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 51 cgccatggagacgctggccagcgccatgcggcgcgacaaccgccgcttcaagccccc 107 |||||||||||||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 97757 cgccatggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagccccc 97813 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 148 agggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggccgg 207 ||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| Sbjct: 135913 agggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccgg 135972 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 148 agggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggccgg 207 ||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| Sbjct: 97857 agggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccgg 97916 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 519 aggtgatgctttaaagaagcttgaggaaaagggtgtggttattcgttttgttattggccg 578 |||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||||| || Sbjct: 136719 aggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgttttgtcattggtcg 136778 Query: 579 gag 581 ||| Sbjct: 136779 gag 136781 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 519 aggtgatgctttaaagaagcttgaggaaaagggtgtggttattcgttttgttattggccg 578 |||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||||| || Sbjct: 98663 aggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgttttgtcattggtcg 98722 Query: 579 gag 581 ||| Sbjct: 98723 gag 98725 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 206 ggctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacaccg 265 |||| ||||||||||||||||| ||| ||||| || || ||||||||||||| | ||| Sbjct: 136059 ggctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccg 136118 Query: 266 gcaat 270 ||||| Sbjct: 136119 gcaat 136123 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 206 ggctatggcaggacgcgcagacccgggccatcctctccggcctcctcgagaagaacaccg 265 |||| ||||||||||||||||| ||| ||||| || || ||||||||||||| | ||| Sbjct: 98003 ggctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccg 98062 Query: 266 gcaat 270 ||||| Sbjct: 98063 gcaat 98067
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 gccttcctcgcctgcctcgcctg 188 ||||||||||||||||||||||| Sbjct: 3403842 gccttcctcgcctgcctcgcctg 3403864
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 gccttcctcgcctgcctcgcctg 188 ||||||||||||||||||||||| Sbjct: 3144963 gccttcctcgcctgcctcgcctg 3144985
>ref|XM_482156.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1777 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 193 tacgtcgccggccggctatggcaggacgcgcaga 226 |||||||||||||| || |||||||| ||||||| Sbjct: 455 tacgtcgccggccgtctgtggcaggatgcgcaga 488
>emb|AJ506738.1|OSA506738 Oryza sativa mRNA for beta 1,3-glycosyltransferase-like protein I (b3gt1 gene) Length = 972 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 193 tacgtcgccggccggctatggcaggacgcgcaga 226 |||||||||||||| || |||||||| ||||||| Sbjct: 46 tacgtcgccggccgtctgtggcaggatgcgcaga 79
>dbj|AK069501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020A13, full insert sequence Length = 1777 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 193 tacgtcgccggccggctatggcaggacgcgcaga 226 |||||||||||||| || |||||||| ||||||| Sbjct: 455 tacgtcgccggccgtctgtggcaggatgcgcaga 488
>emb|AL589952.2| Human DNA sequence from clone RP11-122L16 on chromosome 6, complete sequence Length = 40893 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 313 ggatgcactgggattgggaggaaga 337 |||||||||||||||| |||||||| Sbjct: 7249 ggatgcactgggattgagaggaaga 7225
>emb|AJ003194.1|LCAJ3194 Lactobacillus casei ccpA & tnp genes Length = 3018 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 tgggactggcggtactggtac 416 ||||||||||||||||||||| Sbjct: 2666 tgggactggcggtactggtac 2646
>gb|AE009922.1|AE009922 Pyrobaculum aerophilum strain IM2 section 177 of 201 of the complete genome Length = 11915 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctggccagcgccatgcggcgc 84 ||||||||||||||||||||| Sbjct: 10572 ctggccagcgccatgcggcgc 10592
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 taaagaagcttgaggaaaagg 550 ||||||||||||||||||||| Sbjct: 125442 taaagaagcttgaggaaaagg 125422
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 tcgtcatggccttcctcgcct 178 ||||||||||||||||||||| Sbjct: 3030892 tcgtcatggccttcctcgcct 3030912
>dbj|AP000782.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1199D2 Length = 154037 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 tgccaaggccaagagcgaggg 380 ||||||||||||||||||||| Sbjct: 117709 tgccaaggccaagagcgaggg 117729
>dbj|AP001575.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB2005E8 Length = 56662 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 tgccaaggccaagagcgaggg 380 ||||||||||||||||||||| Sbjct: 6026 tgccaaggccaagagcgaggg 6046
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 gagaagaacaccggcaatct 272 |||||||||||||||||||| Sbjct: 189125 gagaagaacaccggcaatct 189144
>ref|XM_474132.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1068 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 acaccggcaatctccccaag 279 |||||||||||||||||||| Sbjct: 155 acaccggcaatctccccaag 174
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ccgcctcggccggcagggtc 153 |||||||||||||||||||| Sbjct: 1496928 ccgcctcggccggcagggtc 1496909
>gb|AC160935.2| Mus musculus BAC clone RP23-456B7 from chromosome 9, complete sequence Length = 178690 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggccatcctctccggcctcc 250 |||||||||||||||||||| Sbjct: 54153 ggccatcctctccggcctcc 54134
>gb|AC132278.3| Mus musculus BAC clone RP24-346C20 from chromosome 8, complete sequence Length = 154524 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 atggacattgccaaggccaa 371 |||||||||||||||||||| Sbjct: 14452 atggacattgccaaggccaa 14471
>gb|AC122267.4| Mus musculus BAC clone RP23-214H6 from 8, complete sequence Length = 214619 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 atggacattgccaaggccaa 371 |||||||||||||||||||| Sbjct: 192201 atggacattgccaaggccaa 192220
>emb|Z97987.1|HS453P22 Human DNA sequence from clone RP3-453P22 on chromosome 1p36.2-36.3 Contains two novel genes, complete sequence Length = 155176 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggccatcctctccggcctcc 250 |||||||||||||||||||| Sbjct: 92441 ggccatcctctccggcctcc 92422
>emb|AL132795.12|HSDJ412I7 Human DNA sequence from clone RP3-412I7 on chromosome 6q22.1-22.33 Contains a gene similar to murine radial spokehead-like 1, a novel gene, the KPNA5 gene for karyopherin alpha 5 (importin alpha 6) and a CpG island, complete sequence Length = 135417 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 527 ctttaaagaagcttgaggaaaagg 550 ||||||||||||| |||||||||| Sbjct: 11390 ctttaaagaagctggaggaaaagg 11367
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16 Length = 227214 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 gccaaggccaagagcgaggg 380 |||||||||||||||||||| Sbjct: 31870 gccaaggccaagagcgaggg 31889
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 157 ctcgtcatggccttcctcgcctgcctcg 184 ||||||||||||||||| ||| |||||| Sbjct: 195971 ctcgtcatggccttcctggccggcctcg 195944
>gb|AC079399.5| Homo sapiens BAC clone RP11-414P19 from 4, complete sequence Length = 169035 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 ctcccggctcaagaggaaca 493 |||||||||||||||||||| Sbjct: 36827 ctcccggctcaagaggaaca 36846
>gb|AC157474.2| Mus musculus BAC clone RP24-565B5 from chromosome 9, complete sequence Length = 192701 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggccatcctctccggcctcc 250 |||||||||||||||||||| Sbjct: 190910 ggccatcctctccggcctcc 190891
>dbj|AK037778.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130049D12 product:cryptochrome 2 (photolyase-like), full insert sequence Length = 2130 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 tttaaagaagcttgaggaaa 547 |||||||||||||||||||| Sbjct: 851 tttaaagaagcttgaggaaa 832
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 acaccggcaatctccccaag 279 |||||||||||||||||||| Sbjct: 33167789 acaccggcaatctccccaag 33167770
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 catcctctccggcctcctcg 253 |||||||||||||||||||| Sbjct: 27443770 catcctctccggcctcctcg 27443789
>emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb0011N16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 55237 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 catcctctccggcctcctcg 253 |||||||||||||||||||| Sbjct: 38048 catcctctccggcctcctcg 38029
>dbj|AK109786.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C12, full insert sequence Length = 1403 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 acaccggcaatctccccaag 279 |||||||||||||||||||| Sbjct: 224 acaccggcaatctccccaag 243
>dbj|AK073779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069B07, full insert sequence Length = 1817 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 catcctctccggcctcctcg 253 |||||||||||||||||||| Sbjct: 261 catcctctccggcctcctcg 280
>dbj|AK072573.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127K09, full insert sequence Length = 1293 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 acaccggcaatctccccaag 279 |||||||||||||||||||| Sbjct: 225 acaccggcaatctccccaag 244
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 atggagacgctggccagcgccatg 78 ||||||||| |||||||||||||| Sbjct: 1761882 atggagacgttggccagcgccatg 1761859
>dbj|AK063391.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H03, full insert sequence Length = 2272 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 catcctctccggcctcctcg 253 |||||||||||||||||||| Sbjct: 235 catcctctccggcctcctcg 254
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 acaccggcaatctccccaag 279 |||||||||||||||||||| Sbjct: 57989 acaccggcaatctccccaag 57970
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 catcctctccggcctcctcg 253 |||||||||||||||||||| Sbjct: 27369370 catcctctccggcctcctcg 27369389
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 acaccggcaatctccccaag 279 |||||||||||||||||||| Sbjct: 50438 acaccggcaatctccccaag 50419
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 catcctctccggcctcctcg 253 |||||||||||||||||||| Sbjct: 19684 catcctctccggcctcctcg 19703
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 catcctctccggcctcctcg 253 |||||||||||||||||||| Sbjct: 112090 catcctctccggcctcctcg 112109
>emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on chromosome 2, complete sequence Length = 211034 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 tttaaagaagcttgaggaaa 547 |||||||||||||||||||| Sbjct: 208164 tttaaagaagcttgaggaaa 208183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,073,811 Number of Sequences: 3902068 Number of extensions: 4073811 Number of successful extensions: 77965 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77152 Number of HSP's gapped (non-prelim): 813 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
