Clone Name	bart11h12
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_549950.1| Oryza sativa (japonica cultivar-group), mRNA	149	1e-32
2	dbj|AK109436.2| Oryza sativa (japonica cultivar-group) cDNA clon...	149	1e-32
3	dbj|AK104753.1| Oryza sativa (japonica cultivar-group) cDNA clon...	149	1e-32
4	dbj|AK067022.1| Oryza sativa (japonica cultivar-group) cDNA clon...	149	1e-32
5	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	100	9e-18
6	dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic D...	100	9e-18
7	dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic D...	100	9e-18
8	gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the...	62	2e-06
9	ref|XM_418135.1| PREDICTED: Gallus gallus similar to Hypothetica...	48	0.029
10	gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp...	44	0.45
11	emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos...	44	0.45
12	gb|DQ061984.1| Burkholderia mallei strain ATCC 23344 DnaK (dnaK)...	44	0.45
13	gb|AC147992.3| Mus musculus BAC clone RP24-384K8 from chromosome...	42	1.8
14	emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,...	42	1.8
15	dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co...	42	1.8
16	gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde...	42	1.8
17	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.8
18	emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome	42	1.8
19	ref|NM_148728.2| Arabidopsis thaliana unknown protein AT3G16565 ...	40	7.0
20	ref|XM_466757.1| Oryza sativa (japonica cultivar-group), mRNA	40	7.0
21	ref|XM_463276.1| Oryza sativa (japonica cultivar-group), predic...	40	7.0
22	gb|BT015541.1| Arabidopsis thaliana At3g16565 mRNA sequence	40	7.0
23	gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome	40	7.0
24	ref|XM_879234.1| PREDICTED: Bos taurus similar to sterol regulat...	40	7.0
25	ref|NM_015432.2| Homo sapiens pleckstrin homology domain contain...	40	7.0
26	ref|XM_446513.1| Candida glabrata CBS138, CAGL0G03443g partial mRNA	40	7.0
27	gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence	40	7.0
28	emb|Z84488.1|HS93H18 Human DNA sequence from clone RP1-93H18 on ...	40	7.0
29	emb|AL358781.19| Human DNA sequence from clone RP11-334J6 on chr...	40	7.0
30	emb|CR380953.1| Candida glabrata strain CBS138 chromosome G comp...	40	7.0
31	emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome...	40	7.0
32	emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl...	40	7.0
33	gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple...	40	7.0
34	gb|BC083431.1| Danio rerio zgc:103575, mRNA (cDNA clone MGC:1035...	40	7.0
35	ref|NM_001005979.1| Danio rerio zgc:103575 (zgc:103575), mRNA	40	7.0
36	gb|DQ322650.2| Streptomyces sp. 44414 plasmid pRL2, complete seq...	40	7.0
37	emb|BX908400.8| Zebrafish DNA sequence from clone CH211-166I5 in...	40	7.0
38	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	40	7.0
39	gb|AC040160.4|AC040160 Homo sapiens chromosome 16 clone CTC-277H...	40	7.0
40	gb|AC114603.15| Mus musculus chromosome 1, clone RP23-355E19, co...	40	7.0
41	dbj|AB197664.1| Homo sapiens prtphn1 mRNA for puratrophin-1 shor...	40	7.0
42	dbj|AB197663.1| Homo sapiens prtphn1 mRNA for puratrophin-1, com...	40	7.0
43	dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...	40	7.0
44	emb|BX323843.9| Zebrafish DNA sequence from clone CH211-10A23 in...	40	7.0
45	gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome	40	7.0
46	gb|AC040169.7| Homo sapiens chromosome 16 clone RP11-505K9, comp...	40	7.0
47	dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic D...	40	7.0
48	dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic D...	40	7.0
49	dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic D...	40	7.0
50	gb|AY780151.1| Bertia moriformis RNA polymerase II subunit (RPB2...	40	7.0
51	dbj|AK073118.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	7.0
52	gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ...	40	7.0

---

>ref|XM_549950.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1180

 Score =  149 bits (75), Expect = 1e-32
 Identities = 141/163 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  gggccccacgaggctggcctacttcgatgacatgtgggccctccgcgcccccgccgccgt 136
           ||||||||| | ||| || |||||||||||||||||||||||| || || ||||| ||||
Sbjct: 126 gggccccaccaagctcgcgtacttcgatgacatgtgggccctcagctccaccgccaccgt 185

                                                                       
Query: 137 cctctccgtccatcaggaggagggcggccggcgggcggtggtgctggacgccacgatctt 196
           | ||||| |||  ||||||||||| |||||||| |||||| || ||||| ||||  ||||
Sbjct: 186 cgtctccctcctccaggaggaggggggccggcgagcggtgttggtggactccaccgtctt 245

                                                      
Query: 197 ccacccgcagggcggcgggcagccggccgacacgggcgtcatc 239
           | |||||||||||||||| |||||||||||||| |||||||||
Sbjct: 246 ctacccgcagggcggcggccagccggccgacaccggcgtcatc 288



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 140/172 (81%), Gaps = 3/172 (1%)
 Strand = Plus / Plus

                                                                       
Query: 340 aagggcagagtgtcagcatggaaatcgacgcggaccggcgcaagctgaactccaggcttc 399
           |||||||||| || ||| ||||| |||| ||||| || |||||  | || ||||||||||
Sbjct: 404 aagggcagagcgttagcttggaagtcgatgcggaacgccgcaacttaaattccaggcttc 463

                                                                       
Query: 400 actctgcagggcatttgctggacagttgcatgaccaatctcggcctt---catatggaac 456
           | ||||||||||||||| | ||||  ||||||| |||| | ||| |    ||| | || |
Sbjct: 464 attctgcagggcatttgatagacatctgcatgagcaatattggcttatcacatttcgacc 523

                                                               
Query: 457 ctgggaaaggataccattttcctgatgggcctttcgttgagtataagggagt 508
           ||||||||||| | ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 524 ctgggaaaggacatcatttccctgatggacctttcgttgagtataaaggagt 575



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 250 ccaggttcctcgtcgaggacgtgcgcgtcaaggacggggtggtcttccactatggcagat 309
           |||||||| ||||||| || |||||  | ||||| || ||||| ||||||||||| ||||
Sbjct: 305 ccaggttcatcgtcgatgatgtgcggatgaaggatggagtggttttccactatgggagat 364

                       
Query: 310 tcgaggacgctg 321
           | ||||| ||||
Sbjct: 365 ttgaggatgctg 376

---

>dbj|AK109436.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G11, full
           insert sequence
          Length = 1183

 Score =  149 bits (75), Expect = 1e-32
 Identities = 141/163 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  gggccccacgaggctggcctacttcgatgacatgtgggccctccgcgcccccgccgccgt 136
           ||||||||| | ||| || |||||||||||||||||||||||| || || ||||| ||||
Sbjct: 90  gggccccaccaagctcgcgtacttcgatgacatgtgggccctcagctccaccgccaccgt 149

                                                                       
Query: 137 cctctccgtccatcaggaggagggcggccggcgggcggtggtgctggacgccacgatctt 196
           | ||||| |||  ||||||||||| |||||||| |||||| || ||||| ||||  ||||
Sbjct: 150 cgtctccctcctccaggaggaggggggccggcgagcggtgttggtggactccaccgtctt 209

                                                      
Query: 197 ccacccgcagggcggcgggcagccggccgacacgggcgtcatc 239
           | |||||||||||||||| |||||||||||||| |||||||||
Sbjct: 210 ctacccgcagggcggcggccagccggccgacaccggcgtcatc 252



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 140/172 (81%), Gaps = 3/172 (1%)
 Strand = Plus / Plus

                                                                       
Query: 340 aagggcagagtgtcagcatggaaatcgacgcggaccggcgcaagctgaactccaggcttc 399
           |||||||||| || ||| ||||| |||| ||||| || |||||  | || ||||||||||
Sbjct: 368 aagggcagagcgttagcttggaagtcgatgcggaacgccgcaacttaaattccaggcttc 427

                                                                       
Query: 400 actctgcagggcatttgctggacagttgcatgaccaatctcggcctt---catatggaac 456
           | ||||||||||||||| | ||||  ||||||| |||| | ||| |    ||| | || |
Sbjct: 428 attctgcagggcatttgatagacatctgcatgagcaatattggcttatcacatttcgacc 487

                                                               
Query: 457 ctgggaaaggataccattttcctgatgggcctttcgttgagtataagggagt 508
           ||||||||||| | ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 488 ctgggaaaggacatcatttccctgatggacctttcgttgagtataaaggagt 539



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 250 ccaggttcctcgtcgaggacgtgcgcgtcaaggacggggtggtcttccactatggcagat 309
           |||||||| ||||||| || |||||  | ||||| || ||||| ||||||||||| ||||
Sbjct: 269 ccaggttcatcgtcgatgatgtgcggatgaaggatggagtggttttccactatgggagat 328

                       
Query: 310 tcgaggacgctg 321
           | ||||| ||||
Sbjct: 329 ttgaggatgctg 340

---

>dbj|AK104753.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F08, full
           insert sequence
          Length = 1183

 Score =  149 bits (75), Expect = 1e-32
 Identities = 141/163 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  gggccccacgaggctggcctacttcgatgacatgtgggccctccgcgcccccgccgccgt 136
           ||||||||| | ||| || |||||||||||||||||||||||| || || ||||| ||||
Sbjct: 90  gggccccaccaagctcgcgtacttcgatgacatgtgggccctcagctccaccgccaccgt 149

                                                                       
Query: 137 cctctccgtccatcaggaggagggcggccggcgggcggtggtgctggacgccacgatctt 196
           | ||||| |||  ||||||||||| |||||||| |||||| || ||||| ||||  ||||
Sbjct: 150 cgtctccctcctccaggaggaggggggccggcgagcggtgttggtggactccaccgtctt 209

                                                      
Query: 197 ccacccgcagggcggcgggcagccggccgacacgggcgtcatc 239
           | |||||||||||||||| |||||||||||||| |||||||||
Sbjct: 210 ctacccgcagggcggcggccagccggccgacaccggcgtcatc 252



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 140/172 (81%), Gaps = 3/172 (1%)
 Strand = Plus / Plus

                                                                       
Query: 340 aagggcagagtgtcagcatggaaatcgacgcggaccggcgcaagctgaactccaggcttc 399
           |||||||||| || ||| ||||| |||| ||||| || |||||  | || ||||||||||
Sbjct: 368 aagggcagagcgttagcttggaagtcgatgcggaacgccgcaacttaaattccaggcttc 427

                                                                       
Query: 400 actctgcagggcatttgctggacagttgcatgaccaatctcggcctt---catatggaac 456
           | ||||||||||||||| | ||||  ||||||| |||| | ||| |    ||| | || |
Sbjct: 428 attctgcagggcatttgatagacatctgcatgagcaatattggcttatcacatttcgacc 487

                                                               
Query: 457 ctgggaaaggataccattttcctgatgggcctttcgttgagtataagggagt 508
           ||||||||||| | ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 488 ctgggaaaggacatcatttccctgatggacctttcgttgagtataaaggagt 539



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 250 ccaggttcctcgtcgaggacgtgcgcgtcaaggacggggtggtcttccactatggcagat 309
           |||||||| ||||||| || |||||  | ||||| || ||||| ||||||||||| ||||
Sbjct: 269 ccaggttcatcgtcgatgatgtgcggatgaaggatggagtggttttccactatgggagat 328

                       
Query: 310 tcgaggacgctg 321
           | ||||| ||||
Sbjct: 329 ttgaggatgctg 340

---

>dbj|AK067022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090K12, full
           insert sequence
          Length = 1179

 Score =  149 bits (75), Expect = 1e-32
 Identities = 141/163 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  gggccccacgaggctggcctacttcgatgacatgtgggccctccgcgcccccgccgccgt 136
           ||||||||| | ||| || |||||||||||||||||||||||| || || ||||| ||||
Sbjct: 125 gggccccaccaagctcgcgtacttcgatgacatgtgggccctcagctccaccgccaccgt 184

                                                                       
Query: 137 cctctccgtccatcaggaggagggcggccggcgggcggtggtgctggacgccacgatctt 196
           | ||||| |||  ||||||||||| |||||||| |||||| || ||||| ||||  ||||
Sbjct: 185 cgtctccctcctccaggaggaggggggccggcgagcggtgttggtggactccaccgtctt 244

                                                      
Query: 197 ccacccgcagggcggcgggcagccggccgacacgggcgtcatc 239
           | |||||||||||||||| |||||||||||||| |||||||||
Sbjct: 245 ctacccgcagggcggcggccagccggccgacaccggcgtcatc 287



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 140/172 (81%), Gaps = 3/172 (1%)
 Strand = Plus / Plus

                                                                       
Query: 340 aagggcagagtgtcagcatggaaatcgacgcggaccggcgcaagctgaactccaggcttc 399
           |||||||||| || ||| ||||| |||| ||||| || |||||  | || ||||||||||
Sbjct: 403 aagggcagagcgttagcttggaagtcgatgcggaacgccgcaacttaaattccaggcttc 462

                                                                       
Query: 400 actctgcagggcatttgctggacagttgcatgaccaatctcggcctt---catatggaac 456
           | ||||||||||||||| | ||||  ||||||| |||| | ||| |    ||| | || |
Sbjct: 463 attctgcagggcatttgatagacatctgcatgagcaatattggcttatcacatttcgacc 522

                                                               
Query: 457 ctgggaaaggataccattttcctgatgggcctttcgttgagtataagggagt 508
           ||||||||||| | ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 523 ctgggaaaggacatcatttccctgatggacctttcgttgagtataaaggagt 574



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 250 ccaggttcctcgtcgaggacgtgcgcgtcaaggacggggtggtcttccactatggcagat 309
           |||||||| ||||||| || |||||  | ||||| || ||||| ||||||||||| ||||
Sbjct: 304 ccaggttcatcgtcgatgatgtgcggatgaaggatggagtggttttccactatgggagat 363

                       
Query: 310 tcgaggacgctg 321
           | ||||| ||||
Sbjct: 364 ttgaggatgctg 375

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                           
Query: 150     caggaggagggcggccggcgggcggtggtgctggacgccacgatcttccacccgcagggc 209
               ||||||||||| |||||||| |||||| || ||||| ||||  ||||| |||||||||||
Sbjct: 1157127 caggaggaggggggccggcgagcggtgttggtggactccaccgtcttctacccgcagggc 1157068

                                             
Query: 210     ggcgggcagccggccgacacgggcgtcatc 239
               ||||| |||||||||||||| |||||||||
Sbjct: 1157067 ggcggccagccggccgacaccggcgtcatc 1157038



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                           
Query: 77      gggccccacgaggctggcctacttcgatgacatgtgggccctccgcgcccccgccgccgt 136
               ||||||||| | ||| || |||||||||||||||||||||||| || || ||||| ||||
Sbjct: 1157322 gggccccaccaagctcgcgtacttcgatgacatgtgggccctcagctccaccgccaccgt 1157263

                      
Query: 137     cctctcc 143
               | |||||
Sbjct: 1157262 cgtctcc 1157256



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                             
Query: 392     caggcttcactctgcagggcatttgctggacagttgcatgaccaat 437
               ||||||||| ||||||||||||||| | ||||  ||||||| ||||
Sbjct: 1156081 caggcttcattctgcagggcatttgatagacatctgcatgagcaat 1156036



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 116      cctccgcgcccccgccgccg 135
                ||||||||||||||||||||
Sbjct: 17622699 cctccgcgcccccgccgccg 17622680

---

>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0698A04
          Length = 141079

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                          
Query: 150    caggaggagggcggccggcgggcggtggtgctggacgccacgatcttccacccgcagggc 209
              ||||||||||| |||||||| |||||| || ||||| ||||  ||||| |||||||||||
Sbjct: 126441 caggaggaggggggccggcgagcggtgttggtggactccaccgtcttctacccgcagggc 126382

                                            
Query: 210    ggcgggcagccggccgacacgggcgtcatc 239
              ||||| |||||||||||||| |||||||||
Sbjct: 126381 ggcggccagccggccgacaccggcgtcatc 126352



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                          
Query: 77     gggccccacgaggctggcctacttcgatgacatgtgggccctccgcgcccccgccgccgt 136
              ||||||||| | ||| || |||||||||||||||||||||||| || || ||||| ||||
Sbjct: 126636 gggccccaccaagctcgcgtacttcgatgacatgtgggccctcagctccaccgccaccgt 126577

                     
Query: 137    cctctcc 143
              | |||||
Sbjct: 126576 cgtctcc 126570



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 392    caggcttcactctgcagggcatttgctggacagttgcatgaccaat 437
              ||||||||| ||||||||||||||| | ||||  ||||||| ||||
Sbjct: 125395 caggcttcattctgcagggcatttgatagacatctgcatgagcaat 125350

---

>dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0684C01
          Length = 78600

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                         
Query: 150   caggaggagggcggccggcgggcggtggtgctggacgccacgatcttccacccgcagggc 209
             ||||||||||| |||||||| |||||| || ||||| ||||  ||||| |||||||||||
Sbjct: 11430 caggaggaggggggccggcgagcggtgttggtggactccaccgtcttctacccgcagggc 11371

                                           
Query: 210   ggcgggcagccggccgacacgggcgtcatc 239
             ||||| |||||||||||||| |||||||||
Sbjct: 11370 ggcggccagccggccgacaccggcgtcatc 11341



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 77    gggccccacgaggctggcctacttcgatgacatgtgggccctccgcgcccccgccgccgt 136
             ||||||||| | ||| || |||||||||||||||||||||||| || || ||||| ||||
Sbjct: 11625 gggccccaccaagctcgcgtacttcgatgacatgtgggccctcagctccaccgccaccgt 11566

                    
Query: 137   cctctcc 143
             | |||||
Sbjct: 11565 cgtctcc 11559



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 392   caggcttcactctgcagggcatttgctggacagttgcatgaccaat 437
             ||||||||| ||||||||||||||| | ||||  ||||||| ||||
Sbjct: 10384 caggcttcattctgcagggcatttgatagacatctgcatgagcaat 10339

---

>gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the complete genome
          Length = 12204

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                           
Query: 189  acgatcttccacccgcagggcggcgggcagccggccgacacgggcgt 235
            ||||| ||| ||||| ||||||||||||||||||| |||||||||||
Sbjct: 9681 acgatgttctacccggagggcggcgggcagccggcggacacgggcgt 9727

---

>ref|XM_418135.1| PREDICTED: Gallus gallus similar to Hypothetical protein MGC11770
           (LOC420014), mRNA
          Length = 1631

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 173 ggtggtgctggacgccacgatcttccacccgcagggcggcgggcagcc 220
           |||||||||||| | ||||||| ||| |||  ||||||||||||||||
Sbjct: 183 ggtggtgctggaggacacgatcctcctccccgagggcggcgggcagcc 230

---

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 202     cgcagggcggcgggcagccggccgac 227
               |||||||||||| |||||||||||||
Sbjct: 2422232 cgcagggcggcgcgcagccggccgac 2422207

---

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 202     cgcagggcggcgggcagccggccgac 227
               |||||||||||| |||||||||||||
Sbjct: 3380086 cgcagggcggcgcgcagccggccgac 3380061

---

>gb|DQ061984.1| Burkholderia mallei strain ATCC 23344 DnaK (dnaK) gene, complete cds
          Length = 1953

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 202  cgcagggcggcgggcagccggccgac 227
            |||||||||||| |||||||||||||
Sbjct: 1886 cgcagggcggcgcgcagccggccgac 1911

---

>gb|AC147992.3| Mus musculus BAC clone RP24-384K8 from chromosome 18, complete sequence
          Length = 239075

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   gccctccgcgcccccgccgcc 134
             |||||||||||||||||||||
Sbjct: 80242 gccctccgcgcccccgccgcc 80262

---

>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
             complete sequence
          Length = 145739

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   atgacatgtgggccctccgcg 123
             |||||||||||||||||||||
Sbjct: 78020 atgacatgtgggccctccgcg 78000

---

>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 145    tccatcaggaggagggcggcc 165
              |||||||||||||||||||||
Sbjct: 869657 tccatcaggaggagggcggcc 869637

---

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 270    gtgcgcgtcaaggacggggtggtcttcca 298
              |||||||||||||||||| || |||||||
Sbjct: 572939 gtgcgcgtcaaggacgggctgctcttcca 572967

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 103      atgacatgtgggccctccgcg 123
                |||||||||||||||||||||
Sbjct: 29575331 atgacatgtgggccctccgcg 29575311

---

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 205    agggcggcgggcagccggccgacac 229
              |||||||||| ||||||||||||||
Sbjct: 359193 agggcggcggtcagccggccgacac 359217

---

>ref|NM_148728.2| Arabidopsis thaliana unknown protein AT3G16565 mRNA, complete cds
          Length = 759

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 451 tggaacctgggaaaggataccattttcctgatgggccttt 490
           |||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 401 tggagcctggaaaagggtaccattttcctgacggtccttt 440

---

>ref|XM_466757.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 165

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 gggcggcgggcagccggccg 225
           ||||||||||||||||||||
Sbjct: 81  gggcggcgggcagccggccg 62

---

>ref|XM_463276.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 cctccgcgcccccgccgccg 135
           ||||||||||||||||||||
Sbjct: 449 cctccgcgcccccgccgccg 468

---

>gb|BT015541.1| Arabidopsis thaliana At3g16565 mRNA sequence
          Length = 759

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 451 tggaacctgggaaaggataccattttcctgatgggccttt 490
           |||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 401 tggagcctggaaaagggtaccattttcctgacggtccttt 440

---

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 57     gcggggatggcggctccggcgggc 80
              |||||||||||||||| |||||||
Sbjct: 338321 gcggggatggcggctctggcgggc 338298

---

>ref|XM_879234.1| PREDICTED: Bos taurus similar to sterol regulatory element binding
           transcription factor 1 isoform a, transcript variant 3
           (LOC539361), mRNA
          Length = 5424

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 gtgggccctccgcgcccccg 129
           ||||||||||||||||||||
Sbjct: 154 gtgggccctccgcgcccccg 135

---

>ref|NM_015432.2| Homo sapiens pleckstrin homology domain containing, family G (with
            RhoGef domain) member 4 (PLEKHG4), mRNA
          Length = 6826

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  cccgccgccgtcctctccgt 145
            ||||||||||||||||||||
Sbjct: 1852 cccgccgccgtcctctccgt 1833

---

>ref|XM_446513.1| Candida glabrata CBS138, CAGL0G03443g partial mRNA
          Length = 3342

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  cgaggacgtgcgcgtcaagg 282
            ||||||||||||||||||||
Sbjct: 3240 cgaggacgtgcgcgtcaagg 3259

---

>gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence
          Length = 174712

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   ggaggagggcggccggcggg 171
             ||||||||||||||||||||
Sbjct: 20940 ggaggagggcggccggcggg 20921

---

>emb|Z84488.1|HS93H18 Human DNA sequence from clone RP1-93H18 on chromosome 6q21 Contains the
             3' end of a novel gene, the SART2 gene for squamous cell
             carcinoma antigen recognised by T cell, a chromobox
             homolog 3 (HP1 gamma homolog, Drosophila) (CBX3)
             pseudogene, a keratin 18 (KRT18) pseudogene, a novel gene,
             part of a novel gene and two CpG islands, complete
             sequence
          Length = 160378

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   gccctccgcgcccccgccgc 133
             ||||||||||||||||||||
Sbjct: 36981 gccctccgcgcccccgccgc 36962

---

>emb|AL358781.19| Human DNA sequence from clone RP11-334J6 on chromosome 9 Contains the 3'
              end of the gene for a novel protein (KIAA0515), the RNU62
              gene for U62 small nucleolar RNA, a novel gene identical to
              the RNU62 gene, the POMT1 gene for
              protein-O-mannosyltransferase 1, a novel gene, the gene for
              uridine-cytidine kinase 1 (UCK1) and three CpG islands,
              complete sequence
          Length = 147492

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    gataccattttcctgatggg 485
              ||||||||||||||||||||
Sbjct: 139766 gataccattttcctgatggg 139785

---

>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence
          Length = 992211

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    cgaggacgtgcgcgtcaagg 282
              ||||||||||||||||||||
Sbjct: 331970 cgaggacgtgcgcgtcaagg 331951

---

>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13
          Length = 341957

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 57     gcggggatggcggctccggcgggc 80
              |||||||||||||||| |||||||
Sbjct: 338259 gcggggatggcggctctggcgggc 338236

---

>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14
          Length = 343050

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 57     gcggggatggcggctccggcgggc 80
              |||||||||||||||| |||||||
Sbjct: 339270 gcggggatggcggctctggcgggc 339247

---

>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    ggagggcggccggcgggcgg 174
              ||||||||||||||||||||
Sbjct: 151835 ggagggcggccggcgggcgg 151816



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    ggagggcggccggcgggcgg 174
              ||||||||||||||||||||
Sbjct: 130589 ggagggcggccggcgggcgg 130608

---

>gb|BC083431.1| Danio rerio zgc:103575, mRNA (cDNA clone MGC:103575 IMAGE:7243701),
           complete cds
          Length = 2439

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 gccctccgcgcccccgccgc 133
           ||||||||||||||||||||
Sbjct: 211 gccctccgcgcccccgccgc 192

---

>ref|NM_001005979.1| Danio rerio zgc:103575 (zgc:103575), mRNA
          Length = 2439

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 gccctccgcgcccccgccgc 133
           ||||||||||||||||||||
Sbjct: 211 gccctccgcgcccccgccgc 192

---

>gb|DQ322650.2| Streptomyces sp. 44414 plasmid pRL2, complete sequence
          Length = 20252

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  cggccggcgggcggtggtgc 180
            ||||||||||||||||||||
Sbjct: 8699 cggccggcgggcggtggtgc 8680

---

>emb|BX908400.8| Zebrafish DNA sequence from clone CH211-166I5 in linkage group 25,
             complete sequence
          Length = 136937

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 424   gttgcatgaccaatctcggccttc 447
             |||||||||| |||||||||||||
Sbjct: 97341 gttgcatgactaatctcggccttc 97364

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 158     gggcggccggcgggcggtgg 177
               ||||||||||||||||||||
Sbjct: 6551289 gggcggccggcgggcggtgg 6551270

---

>gb|AC040160.4|AC040160 Homo sapiens chromosome 16 clone CTC-277H1, complete sequence
          Length = 209574

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   cccgccgccgtcctctccgt 145
             ||||||||||||||||||||
Sbjct: 59463 cccgccgccgtcctctccgt 59482

---

>gb|AC114603.15| Mus musculus chromosome 1, clone RP23-355E19, complete sequence
          Length = 260698

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    ccgcgcccccgccgccgtcc 138
              ||||||||||||||||||||
Sbjct: 215348 ccgcgcccccgccgccgtcc 215367

---

>dbj|AB197664.1| Homo sapiens prtphn1 mRNA for puratrophin-1 short-form, complete cds
          Length = 6993

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  cccgccgccgtcctctccgt 145
            ||||||||||||||||||||
Sbjct: 1852 cccgccgccgtcctctccgt 1833

---

>dbj|AB197663.1| Homo sapiens prtphn1 mRNA for puratrophin-1, complete cds
          Length = 6826

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  cccgccgccgtcctctccgt 145
            ||||||||||||||||||||
Sbjct: 1852 cccgccgccgtcctctccgt 1833

---

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     cctccgcgcccccgccgccg 135
               ||||||||||||||||||||
Sbjct: 2666325 cctccgcgcccccgccgccg 2666344

---

>emb|BX323843.9| Zebrafish DNA sequence from clone CH211-10A23 in linkage group 19,
             complete sequence
          Length = 128245

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   gccctccgcgcccccgccgc 133
             ||||||||||||||||||||
Sbjct: 43166 gccctccgcgcccccgccgc 43147

---

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 114     gccctccgcgcccccgccgccgtc 137
               |||| |||||||||||||||||||
Sbjct: 3303751 gcccaccgcgcccccgccgccgtc 3303774

---

>gb|AC040169.7| Homo sapiens chromosome 16 clone RP11-505K9, complete sequence
          Length = 212596

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 384   ctgaactccaggcttcactctgca 407
             ||||||||||||||| ||||||||
Sbjct: 51288 ctgaactccaggcttaactctgca 51265

---

>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBa0094H06
          Length = 147245

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  cctccgcgcccccgccgccg 135
            ||||||||||||||||||||
Sbjct: 4234 cctccgcgcccccgccgccg 4215

---

>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0436D06
          Length = 148246

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    cctccgcgcccccgccgccg 135
              ||||||||||||||||||||
Sbjct: 140271 cctccgcgcccccgccgccg 140252

---

>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1307A11
          Length = 131538

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    gggcggccggcgggcggtgg 177
              ||||||||||||||||||||
Sbjct: 111902 gggcggccggcgggcggtgg 111883

---

>gb|AY780151.1| Bertia moriformis RNA polymerase II subunit (RPB2) gene, partial
           cds
          Length = 1215

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 133 ccgtcctctccgtccatcaggaggagggcggc 164
           ||||| || ||||||| |||||||||||||||
Sbjct: 686 ccgtcttcaccgtccagcaggaggagggcggc 717

---

>dbj|AK073118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033011J18, full
           insert sequence
          Length = 2034

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 cctccgcgcccccgccgccg 135
           ||||||||||||||||||||
Sbjct: 366 cctccgcgcccccgccgccg 385

---

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     ggcggtggtgctggacgcca 189
               ||||||||||||||||||||
Sbjct: 3613865 ggcggtggtgctggacgcca 3613884


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,411,118
Number of Sequences: 3902068
Number of extensions: 3411118
Number of successful extensions: 83335
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81706
Number of HSP's gapped (non-prelim): 1629
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---