Clone Name | bart11h05 |
---|---|
Clone Library Name | barley_pub |
>LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.210) (Limonoid| glucosyltransferase) (Limonoid GTase) (LGTase) Length = 511 Score = 67.0 bits (162), Expect = 3e-11 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 2/157 (1%) Frame = +3 Query: 99 HFLIVAYGIQSHLNPCRVLAHRLARLHDGSGPVLATVSLPVSAHRRMFPSSRAVDNDEDT 278 H L+V++ H+NP RL RL G L T++ P S ++M + + Sbjct: 8 HVLLVSFPGHGHVNPLL----RLGRLLASKGFFL-TLTTPESFGKQMRKAGNFT-YEPTP 61 Query: 279 ATDGVVSYAPYSDGLDDGSMARDG--EARARSRHATFESLSAVVATLAARGRPVTCVVCS 452 DG + + + DG D+ R+ + A+ + + ++ A RPV+C++ + Sbjct: 62 VGDGFIRFEFFEDGWDEDDPRREDLDQYMAQLELIGKQVIPKIIKKSAEEYRPVSCLINN 121 Query: 453 MVLPAALDVAREHAIPLAVFWLQPATVLAAYYHYFHG 563 +P DVA +P A+ W+Q AAYYHYFHG Sbjct: 122 PFIPWVSDVAESLGLPSAMLWVQSCACFAAYYHYFHG 158
>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)| (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) Length = 471 Score = 50.8 bits (120), Expect = 3e-06 Identities = 48/158 (30%), Positives = 60/158 (37%), Gaps = 3/158 (1%) Frame = +3 Query: 99 HFLIVAYGIQSHLNPCRVLAHRLARLHDGSGPVLATVSLPVSAHRRMFPSSRAVDNDEDT 278 H L+V + Q H+NP A RLA G L T R D D Sbjct: 4 HVLVVPFPGQGHMNPMVQFAKRLAS--KGVATTLVTTRF----------IQRTADVDAHP 51 Query: 279 ATDGVVSYAPYSDGLDDG---SMARDGEARARSRHATFESLSAVVATLAARGRPVTCVVC 449 A +S DG D+G S A E + A SL+++V A+ TCVV Sbjct: 52 AMVEAIS-----DGHDEGGFASAAGVAEYLEKQAAAASASLASLVEARASSADAFTCVVY 106 Query: 450 SMVLPAALDVAREHAIPLAVFWLQPATVLAAYYHYFHG 563 L VAR +P F Q V A YYH+ G Sbjct: 107 DSYEDWVLPVARRMGLPAVPFSTQSCAVSAVYYHFSQG 144
>COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1.-) (Zeatin| O-glucosyltransferase 2) Length = 489 Score = 46.6 bits (109), Expect = 5e-05 Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 8/161 (4%) Frame = +3 Query: 99 HFLIVAYGIQSHLNPCRVLAHRLARLHDGSGPVLATVSLPVSAHRRMFPSSRAVDNDEDT 278 H + V Y Q H+NP R+A+L G + V+ + +R F SR Sbjct: 13 HVVCVPYPAQGHINPMM----RVAKLLHARGFYVTFVNTVYNHNR--FLRSRG-----SN 61 Query: 279 ATDGVVSYA--PYSDGLDDGSMARDGEARARSRHATFESLSAVVATLAARGR------PV 434 A DG+ S+ +DGL + M + A +T ++ A L R PV Sbjct: 62 ALDGLPSFRFESIADGLPETDMDATQDITALCE-STMKNCLAPFRELLQRINAGDNVPPV 120 Query: 435 TCVVCSMVLPAALDVAREHAIPLAVFWLQPATVLAAYYHYF 557 +C+V + LDVA E +P +FW AY H++ Sbjct: 121 SCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFY 161
>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor| Length = 1783 Score = 32.0 bits (71), Expect = 1.2 Identities = 26/69 (37%), Positives = 36/69 (52%) Frame = -3 Query: 412 RVATTADRLSKVAWRLRALASPSLAMEPSSRPSEYGA*ETTPSVAVSSSLSTARDEGNMR 233 R++ TA AW+ A+A+P A PS P A P+ SS+L T +G+MR Sbjct: 272 RISQTAGE----AWKAGAVAAPPAAPTPS--PPGLAA---APTRLASSALGTHSSDGDMR 322 Query: 232 R*ADTGRET 206 R A GR+T Sbjct: 323 R-AVPGRDT 330
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 31.6 bits (70), Expect = 1.6 Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 5/120 (4%) Frame = -3 Query: 538 ASTVAGWSQNTASGMAC--SRATSSAAGRTMLQTTHVTGRPRAARVATTADRL---SKVA 374 +S + S+++ASG + S A+ S+A + ++ + P ++ +++ S + Sbjct: 429 SSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPS 488 Query: 373 WRLRALASPSLAMEPSSRPSEYGA*ETTPSVAVSSSLSTARDEGNMRR*ADTGRETVART 194 + +SPS + SS PS + + PS + SSS +++ + A T T+A T Sbjct: 489 SSASSSSSPSSSASSSSAPSSSASSSSAPSSSASSSSASSSSASSA---ATTAATTIATT 545
>MURB_SHEON (Q8EK85) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 341 Score = 31.2 bits (69), Expect = 2.1 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 75 NGGVHTGHHFLIVAYGIQSHLNPCRVLAHRLARLHDGSGPVL 200 N GVH ++V G + + CR+ H +AR+HD G +L Sbjct: 283 NAGVHAKQALVLVNLGNATGQDICRLALHVIARVHDVFGVML 324
>DP87_DICDI (Q04503) Prespore protein DP87 precursor| Length = 555 Score = 31.2 bits (69), Expect = 2.1 Identities = 30/96 (31%), Positives = 46/96 (47%) Frame = -3 Query: 541 AASTVAGWSQNTASGMACSRATSSAAGRTMLQTTHVTGRPRAARVATTADRLSKVAWRLR 362 AAST+A TAS +A + TS+ T T G + A++AD + + Sbjct: 440 AASTIA----TTASTVATT--TSATTAGTTTGGTTTGGSTSDSSAASSADSSAASSSPSS 493 Query: 361 ALASPSLAMEPSSRPSEYGA*ETTPSVAVSSSLSTA 254 + AS + + EPSS + A + S A SS+ S+A Sbjct: 494 SAASSAASSEPSSSAASSSAPSSASSSAPSSASSSA 529
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.8 bits (68), Expect = 2.8 Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 1/120 (0%) Frame = -3 Query: 541 AASTVAGWSQNTASGMACSRATSSAAGRTMLQTTHVTGRPRAARVATTADRLSKVAWRLR 362 A +T A + T + + AT++AA T T+ T TTA + Sbjct: 193 ATTTAATTTAATTTAATTTAATTTAATTTAATTSSATTAATTTAATTTAATTTAATTTAA 252 Query: 361 ALASPSLAMEPSS-RPSEYGA*ETTPSVAVSSSLSTARDEGNMRR*ADTGRETVARTGPE 185 + + P+S S GA +TPS + ++S + + T T A T E Sbjct: 253 TTTAATTTGSPTSGSTSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAE 312
>RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 30.4 bits (67), Expect = 3.6 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%) Frame = -3 Query: 541 AASTVAGWSQNTASGMACSRATSSAAGRTMLQTTHVTGRPRAARVATTADRLSKVAWRLR 362 AAS++ + AS A S A+S A G Q + +P A+ A +A ++ A Sbjct: 370 AASSLGSYGAQAASYGAQSAASSLAYGA---QAASYSAQPSASYSAQSAPYAAQQAASYS 426 Query: 361 A-----LASPSLAMEPSSRPSEYGA*ETTP 287 + +A P+ A +S+P+ Y A TTP Sbjct: 427 SQPAAYVAQPATAAAYASQPAAYAAQATTP 456
>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 751 Score = 30.0 bits (66), Expect = 4.7 Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 3/89 (3%) Frame = -3 Query: 505 ASGMACSRATSSAAGRTMLQTTHVTGRPRAARVATTADRLSKVAWRLRALASPSLAMEPS 326 A G A +A S +A +TT + G P + AD SKV+ +A S P Sbjct: 228 APGTATPQARSVSASGVSGETTSIPGFPAEGSIPLPADFFSKVSAETQA----SPPEGPG 283 Query: 325 SRPSEYG---A*ETTPSVAVSSSLSTARD 248 + PSE G A E T V + +S +D Sbjct: 284 TGPSEEGHEAAPEFTFHVEIKASAPKEQD 312
>ATG13_ASPFU (Q4WHN5) Autophagy-related protein 13| Length = 958 Score = 30.0 bits (66), Expect = 4.7 Identities = 21/66 (31%), Positives = 29/66 (43%) Frame = +3 Query: 225 AHRRMFPSSRAVDNDEDTATDGVVSYAPYSDGLDDGSMARDGEARARSRHATFESLSAVV 404 +HRR PSS ++ ED A+ G S G +A A S HA E++S + Sbjct: 496 SHRRGRPSSGGINKIEDDASSGKASATSSGAQPGSGLLAEVTGTSADSLHADDENISEFL 555 Query: 405 ATLAAR 422 L R Sbjct: 556 KMLDLR 561
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 30.0 bits (66), Expect = 4.7 Identities = 25/95 (26%), Positives = 44/95 (46%) Frame = -3 Query: 541 AASTVAGWSQNTASGMACSRATSSAAGRTMLQTTHVTGRPRAARVATTADRLSKVAWRLR 362 A S+ S T+S +A S TSS+ + + ++ + A +TT+ L+ + Sbjct: 114 ATSSSLASSSTTSSSLASSSITSSSLASSSITSSSL------ASSSTTSSSLASSSTNST 167 Query: 361 ALASPSLAMEPSSRPSEYGA*ETTPSVAVSSSLST 257 A+P+ + SS S + T S SSSL++ Sbjct: 168 TSATPTSSATSSSLSSTAASNSATSSSLASSSLNS 202
>RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 29.6 bits (65), Expect = 6.1 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 5/90 (5%) Frame = -3 Query: 541 AASTVAGWSQNTASGMACSRATSSAAGRTMLQTTHVTGRPRAARVATTADRLSKVAWRLR 362 AAS++ + AS A S A+S A G Q +P A+ A +A ++ A Sbjct: 370 AASSLGSYGAQAASYGAQSAASSLAYGA---QAASYNAQPSASYNAQSAPYAAQQAASYS 426 Query: 361 A-----LASPSLAMEPSSRPSEYGA*ETTP 287 + +A P+ A +S+P+ Y A TTP Sbjct: 427 SQPAAYVAQPATAAAYASQPAAYAAQATTP 456
>RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif protein 14)| (RRM-containing coactivator activator/modulator) (Synaptotagmin-interacting protein) (SYT-interacting protein) Length = 669 Score = 29.6 bits (65), Expect = 6.1 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 5/90 (5%) Frame = -3 Query: 541 AASTVAGWSQNTASGMACSRATSSAAGRTMLQTTHVTGRPRAARVATTADRLSKVAWRLR 362 AAS++ + AS A S A+S A G Q +P A+ A +A ++ A Sbjct: 370 AASSLGSYGAQAASYGAQSAASSLAYGA---QAASYNAQPSASYNAQSAPYAAQQAASYS 426 Query: 361 A-----LASPSLAMEPSSRPSEYGA*ETTP 287 + +A P+ A +S+P+ Y A TTP Sbjct: 427 SQPAAYVAQPATAAAYASQPAAYAAQATTP 456
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 29.6 bits (65), Expect = 6.1 Identities = 20/95 (21%), Positives = 45/95 (47%) Frame = -3 Query: 538 ASTVAGWSQNTASGMACSRATSSAAGRTMLQTTHVTGRPRAARVATTADRLSKVAWRLRA 359 +ST S + S + S ++SS + + +T + ++ + +T+ + + + Sbjct: 194 SSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTS 253 Query: 358 LASPSLAMEPSSRPSEYGA*ETTPSVAVSSSLSTA 254 +S S + PSS + + T+PS +S+ ST+ Sbjct: 254 TSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTS 288
>SIM1_YEAST (P40472) Protein SIM1 precursor| Length = 475 Score = 29.3 bits (64), Expect = 8.0 Identities = 27/101 (26%), Positives = 43/101 (42%) Frame = -3 Query: 541 AASTVAGWSQNTASGMACSRATSSAAGRTMLQTTHVTGRPRAARVATTADRLSKVAWRLR 362 AAS A SQ +S + S ATS+ L+++ V+ A +T S Sbjct: 107 AASATASTSQGASSSSSSSSATST------LESSSVSSSSEEAAPTSTVVSTSSATQSSA 160 Query: 361 ALASPSLAMEPSSRPSEYGA*ETTPSVAVSSSLSTARDEGN 239 + A+ S S S + +T S + SSS S++ G+ Sbjct: 161 SSATKSSTSSTSPSTSTSTSTSSTSSSSSSSSSSSSSSSGS 201
>SPAG1_MOUSE (Q80ZX8) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (TPR-containing protein involved in spermatogenesis) (TPIS) Length = 901 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/60 (25%), Positives = 26/60 (43%) Frame = +3 Query: 261 DNDEDTATDGVVSYAPYSDGLDDGSMARDGEARARSRHATFESLSAVVATLAARGRPVTC 440 D + + + + AP DG++DG A E S+ V++T++AR C Sbjct: 741 DEEPERPAEASATSAPARDGVEDGGSAEPAEKLDVSKPTNAYEFGQVLSTISARKDEEAC 800
>GCSP_RALSO (Q8XU98) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 982 Score = 29.3 bits (64), Expect = 8.0 Identities = 22/64 (34%), Positives = 28/64 (43%) Frame = +3 Query: 120 GIQSHLNPCRVLAHRLARLHDGSGPVLATVSLPVSAHRRMFPSSRAVDNDEDTATDGVVS 299 G SHLN L H G GP + V+ V AH F RA ++ + G VS Sbjct: 720 GDVSHLN----LHKTFCIPHGGGGPGVGPVA--VGAHLAPFLPGRAASGEDASQNIGAVS 773 Query: 300 YAPY 311 AP+ Sbjct: 774 AAPF 777 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,218,272 Number of Sequences: 219361 Number of extensions: 1152569 Number of successful extensions: 4661 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4371 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4651 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)