Clone Name | bart11h04 |
---|---|
Clone Library Name | barley_pub |
>PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (Apase-1(1))| Length = 255 Score = 104 bits (259), Expect = 2e-22 Identities = 45/106 (42%), Positives = 67/106 (63%) Frame = +2 Query: 227 CDSWVLGVEAHNVRDWRTVPASCEGYVGHYMLGSHFRRDSXVVIDQALAYVDSLKLAGNG 406 C +W VE +N+ W+T+P C YV YM+G ++ + V D+A Y S+ L +G Sbjct: 43 CTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDLGDDG 102 Query: 407 KEVWVFDIDETTLSNLPYYAXHGFGATPFNATSFNAYVLQGSAPAL 544 ++VW+FD+DET LSNLPYY+ H +G F+ F+ +V G+APAL Sbjct: 103 RDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFDKWVENGTAPAL 148
>S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein VSP25) (Fragment) Length = 291 Score = 101 bits (252), Expect = 1e-21 Identities = 50/111 (45%), Positives = 68/111 (61%) Frame = +2 Query: 221 VACDSWVLGVEAHNVRDWRTVPASCEGYVGHYMLGSHFRRDSXVVIDQALAYVDSLKLAG 400 V C SW L VEAHN+ + T+P C Y+ G +R DS V QA Y L++ Sbjct: 37 VKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV-- 94 Query: 401 NGKEVWVFDIDETTLSNLPYYAXHGFGATPFNATSFNAYVLQGSAPALPET 553 + K+ +VF ID T LSN+PYY HG+G FN+T ++ +V +G+APALPET Sbjct: 95 HPKDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPET 145
>VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetative storage| protein A) Length = 254 Score = 101 bits (252), Expect = 1e-21 Identities = 50/111 (45%), Positives = 68/111 (61%) Frame = +2 Query: 221 VACDSWVLGVEAHNVRDWRTVPASCEGYVGHYMLGSHFRRDSXVVIDQALAYVDSLKLAG 400 V C SW L VEAHN+ + T+P C Y+ G +R DS V QA Y L++ Sbjct: 40 VKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV-- 97 Query: 401 NGKEVWVFDIDETTLSNLPYYAXHGFGATPFNATSFNAYVLQGSAPALPET 553 + K+ +VF ID T LSN+PYY HG+G FN+T ++ +V +G+APALPET Sbjct: 98 HPKDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPET 148
>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein B) Length = 254 Score = 101 bits (251), Expect = 2e-21 Identities = 53/124 (42%), Positives = 73/124 (58%), Gaps = 1/124 (0%) Frame = +2 Query: 185 LRPLLGSGKHAG-VACDSWVLGVEAHNVRDWRTVPASCEGYVGHYMLGSHFRRDSXVVID 361 LR G G+ + V C S+ L VEAHN+R ++T+P C Y+ G FR DS V Sbjct: 28 LRMKTGYGERSSEVKCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQ 87 Query: 362 QALAYVDSLKLAGNGKEVWVFDIDETTLSNLPYYAXHGFGATPFNATSFNAYVLQGSAPA 541 QA Y ++ N ++++F ID T LSN+PYY HG+G FN T ++ +V +G APA Sbjct: 88 QAFFYASEREVHHN--DIFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYDEWVNKGDAPA 145 Query: 542 LPET 553 LPET Sbjct: 146 LPET 149
>VSP2_ARATH (O82122) Vegetative storage protein 2 precursor| Length = 265 Score = 89.4 bits (220), Expect = 6e-18 Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%) Frame = +2 Query: 227 CDSWVLGVEAHNVRDWRTVPASCEGYVGHYMLGS-HFRRDSXVVIDQALAYVDSLKLAGN 403 C SW LGVE N+ D+ TVPA+C+ YV Y++ S ++ DS V +A Y L L + Sbjct: 52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKND 111 Query: 404 GKEVWVFDIDETTLSNLPYYAXHGFGATPFNATSFNAYVLQG-SAPALPE 550 VW+FD+D+T LS++PYYA +G+G + ++ ++ G S P LPE Sbjct: 112 TVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPE 161
>VSP1_ARATH (O49195) Vegetative storage protein 1 precursor| Length = 270 Score = 88.6 bits (218), Expect = 1e-17 Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 2/111 (1%) Frame = +2 Query: 227 CDSWVLGVEAHNVRDWRTVPASCEGYVGHYMLGS-HFRRDSXVVIDQALAYVDSLKLAGN 403 C SW LGVE N+ ++ TVPA+C+ YV Y++ S ++ DS V +A Y L L + Sbjct: 57 CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKND 116 Query: 404 GKEVWVFDIDETTLSNLPYYAXHGFGATPFNATSFNAYVLQG-SAPALPET 553 VW+FD+D+T LS++PYYA +G+G ++ +++ G S P LPET Sbjct: 117 TINVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPET 167
>CYF_PSINU (Q8WI07) Apocytochrome f precursor| Length = 321 Score = 32.7 bits (73), Expect = 0.70 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = +2 Query: 116 VNIRMPTSAAD--VDEAVVA-PLIHALRPLLGSGKHAGVACDSWVLGVEAHNVRDWRTVP 286 V+I +P S V EAVV P ++ +LG+GK G+ + ++ E + + +P Sbjct: 66 VDIEVPQSVFPNTVFEAVVKIPYDKQIKQVLGNGKKGGINVGAVLILPEGFELAPYNRIP 125 Query: 287 ASCEGYVGHYMLGSHFRRDSXVVI 358 A + +G L ++R D +I Sbjct: 126 AEMKDKIGDLALFQNYRPDKRNII 149
>HEL_HAEIN (P26093) Lipoprotein E precursor (Outer membrane protein P4) (OMP| P4) Length = 274 Score = 32.7 bits (73), Expect = 0.70 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%) Frame = +2 Query: 317 MLGSHFRRDSXVVIDQALAY---------VDSLKLAGNGKEVWVFDIDETTLSNLPYYAX 469 +LG ++ +DS +ALAY D K+A K+ V D+DET L N PY Sbjct: 41 VLGLNWMQDSGEY--KALAYQAYNAAKVAFDHAKVAKGKKKAVVADLDETMLDNSPYAGW 98 Query: 470 HGFGATPFNATSFNAYVLQGSAPALP 547 PF+ + +V + A+P Sbjct: 99 QVQNNKPFDGKDWTRWVDARQSRAVP 124
>MMPL8_MYCTU (O07800) Putative membrane protein mmpL8| Length = 1089 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +2 Query: 245 GVEAHNVRDWRTVPASCEGYVGHYMLGSHFRRDSXVVIDQALAYVDSLKL 394 G+ +N D +T+PAS E +G+ L HF S ++I + L S L Sbjct: 418 GLARYNYDDRKTLPASVESSIGYAALDKHF--PSNLIIPEYLFIQSSTDL 465
>RPOB_CYACA (Q9TM35) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1081 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 Query: 170 PLIHALRPLLGSGKHAGVACDSWVLGVEAHN 262 PLI RPL+G+G A +A DS ++ + N Sbjct: 552 PLIFPERPLVGTGLEAQIAKDSGIMAISRSN 582
>PLB3_CANAL (Q9UVX1) Lysophospholipase 3 precursor (EC 3.1.1.5) (Phospholipase| B 3) Length = 754 Score = 29.3 bits (64), Expect = 7.8 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Frame = +2 Query: 179 HALRPLLGSGKHA-GVACDSWVLGVEAHNVRDWRTVPASCEGYVGHYMLGSHFRRDSXVV 355 H L LL S + G++ +W++G A N DW +V G + L S + Sbjct: 209 HGLGGLLDSSTYVVGLSGGNWLVGSLALN--DWLSVGDIVNGKSTIWQLQDSILNPSGMR 266 Query: 356 IDQALAYVDSLKLAGNGKE 412 ID+ +AY L A KE Sbjct: 267 IDKTIAYYYGLAQAVQAKE 285 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,364,654 Number of Sequences: 219361 Number of extensions: 782667 Number of successful extensions: 2682 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2563 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2669 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)