ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart11h04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase Length = 2748 Score = 529 bits (267), Expect = e-147 Identities = 455/517 (88%), Gaps = 6/517 (1%) Strand = Plus / Plus Query: 37 agaaatggcgatggctaggacgacgacgctcctcctcgtcgccgcagctctcctcgcggc 96 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| Sbjct: 1795 agaaatggcgatggctaggacgacggcgctcctcctcgtcgccgcggctctcctggcggc 1854 Query: 97 ctcatgcagcgcatgggaggtcaacatccgcatgccgacgtcggcggcggacgtggacga 156 ||||| ||||||||||||||| ||||||| |||||| |||||||||| ||||||||| Sbjct: 1855 ctcatccagcgcatgggaggtgaacatccagatgccggcgtcggcggc---cgtggacga 1911 Query: 157 ggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggcaagcacgc 216 || |||| | ||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 1912 tgctgtgg---caccgctcatccacgcgctgcggccgctcctgggctccggcaagcaagc 1968 Query: 217 cggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactggag 276 ||| ||||||||||| |||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 1969 cggcgtggcgtgcgatagctggcggctgggcgtggaggcgtacaacgtgcgggactggaa 2028 Query: 277 gacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccatttccg 336 ||||||||| || | ||||||||||||||| || |||||||||||||||| ||| ||||| Sbjct: 2029 gacggtgccggccaactgcgagggctacgtggggcactacatgctcggcaaccacttccg 2088 Query: 337 ccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcgc 396 ||||||| | |||||||||||||||||||| ||||||| |||||| |||||||||||| Sbjct: 2089 gcgcgactgcaaggtcgtcatcgaccaggccatcgcctacgtcgacggcctcaagctcgc 2148 Query: 397 cggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctccc 456 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2149 cggcaacggcaaggacgtgtgggtcttcgacatcgacgagaccaccctctccaacctccc 2208 Query: 457 ctactacgccnagcacggcttcggggctacaccgttcaacgcgaccagcttcaacgcata 516 ||||||||| ||||||||| ||||||| || | ||||||||| |||||| |||| || Sbjct: 2209 ttactacgccacgcacggctttggggctaggccatacaacgcgacgagcttcgacgcgta 2268 Query: 517 cgtgctacaggggagcgcgccagccctgccggagacg 553 |||| | ||||||| || || | |||||||||||| Sbjct: 2269 cgtgatggaggggagtgcaccggtgctgccggagacg 2305
>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3 gene) Length = 1152 Score = 529 bits (267), Expect = e-147 Identities = 455/517 (88%), Gaps = 6/517 (1%) Strand = Plus / Plus Query: 37 agaaatggcgatggctaggacgacgacgctcctcctcgtcgccgcagctctcctcgcggc 96 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| Sbjct: 199 agaaatggcgatggctaggacgacggcgctcctcctcgtcgccgcggctctcctggcggc 258 Query: 97 ctcatgcagcgcatgggaggtcaacatccgcatgccgacgtcggcggcggacgtggacga 156 ||||| ||||||||||||||| ||||||| |||||| |||||||||| ||||||||| Sbjct: 259 ctcatccagcgcatgggaggtgaacatccagatgccggcgtcggcggc---cgtggacga 315 Query: 157 ggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggcaagcacgc 216 || |||| | ||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 316 tgctgtgg---caccgctcatccacgcgctgcggccgctcctgggctccggcaagcaagc 372 Query: 217 cggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactggag 276 ||| ||||||||||| |||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 373 cggcgtggcgtgcgatagctggcggctgggcgtggaggcgtacaacgtgcgggactggaa 432 Query: 277 gacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccatttccg 336 ||||||||| || | ||||||||||||||| || |||||||||||||||| ||| ||||| Sbjct: 433 gacggtgccggccaactgcgagggctacgtggggcactacatgctcggcaaccacttccg 492 Query: 337 ccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcgc 396 ||||||| | |||||||||||||||||||| ||||||| |||||| |||||||||||| Sbjct: 493 gcgcgactgcaaggtcgtcatcgaccaggccatcgcctacgtcgacggcctcaagctcgc 552 Query: 397 cggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctccc 456 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 cggcaacggcaaggacgtgtgggtcttcgacatcgacgagaccaccctctccaacctccc 612 Query: 457 ctactacgccnagcacggcttcggggctacaccgttcaacgcgaccagcttcaacgcata 516 ||||||||| ||||||||| ||||||| || | ||||||||| |||||| |||| || Sbjct: 613 ttactacgccacgcacggctttggggctaggccatacaacgcgacgagcttcgacgcgta 672 Query: 517 cgtgctacaggggagcgcgccagccctgccggagacg 553 |||| | ||||||| || || | |||||||||||| Sbjct: 673 cgtgatggaggggagtgcaccggtgctgccggagacg 709
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 266 bits (134), Expect = 7e-68 Identities = 235/268 (87%), Gaps = 1/268 (0%) Strand = Plus / Minus Query: 214 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 273 |||||| |||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct: 92232 cgccggcgtggcgtgcgacagctggaggctggcggtggaggcgcacaacgtgatccggtg 92173 Query: 274 gaggacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccattt 333 || ||||||||| || |||||||||||||||||||||||||||||||||||| |||| | Sbjct: 92172 gaagacggtgccggccagctgcgagggctacgtcggccactacatgctcggcggccacta 92113 Query: 334 ccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagct 393 |||||||||||| | ||||| ||||| ||||| ||||||| || ||| ||||||||| Sbjct: 92112 ccgccgcgactcaccg-tcgtcgtcgacgaggccatcgcctacgtggacagcctcaagct 92054 Query: 394 cgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacct 453 ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 92053 cgccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacct 91994 Query: 454 cccctactacgccnagcacggcttcggg 481 |||||||| |||| ||||||| |||||| Sbjct: 91993 cccctacttcgccaagcacggattcggg 91966 Score = 244 bits (123), Expect = 3e-61 Identities = 234/269 (86%), Gaps = 2/269 (0%) Strand = Plus / Minus Query: 214 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 273 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 83956 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 83897 Query: 274 gaggacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 332 |||||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 83896 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 83838 Query: 333 tccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 392 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 83837 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 83778 Query: 393 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 452 |||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||||| Sbjct: 83777 tcgccggcaatggcaaggagatctgggtgttcgacatcgacgagacctctctctccaacc 83718 Query: 453 tcccctactacgccnagcacggcttcggg 481 |||||||||||||| |||||||||||||| Sbjct: 83717 tcccctactacgccaagcacggcttcggg 83689 Score = 228 bits (115), Expect = 2e-56 Identities = 231/269 (85%), Gaps = 1/269 (0%) Strand = Plus / Minus Query: 214 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 273 |||||| |||||||||||||||||| ||| || |||||||| ||||||||| | || Sbjct: 105854 cgccggcgtggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtg 105795 Query: 274 gaggacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcag-ccatt 332 || ||||||||| || || |||||||||||||||||||||||||||||||| | ||| | Sbjct: 105794 gaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccact 105735 Query: 333 tccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 392 |||||| |||||| |||||||||||| ||||| ||||||| | ||| |||| ||| Sbjct: 105734 accgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagc 105675 Query: 393 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 452 || ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 105674 tctccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacc 105615 Query: 453 tcccctactacgccnagcacggcttcggg 481 |||||||||||||| ||||||| |||||| Sbjct: 105614 tcccctactacgccaagcacggattcggg 105586 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 154 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 208 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 92304 cgaggccgtggtggcgccgctcatccacgcgctgcggccgctgctgggctccggc 92250 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 154 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 208 |||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 105926 cgaggccgtggtggcgccgatcatccacgcgctgcggccgctgctgggctccggc 105872 Score = 77.8 bits (39), Expect = 3e-11 Identities = 115/141 (81%) Strand = Plus / Minus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5913 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 5854 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 455 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 5853 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 5794 Query: 456 cctactacgccnagcacggct 476 ||||| | ||| |||| |||| Sbjct: 5793 cctaccaggccaagcatggct 5773 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 154 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 208 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 84028 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 83974
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 266 bits (134), Expect = 7e-68 Identities = 235/268 (87%), Gaps = 1/268 (0%) Strand = Plus / Minus Query: 214 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 273 |||||| |||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct: 5559023 cgccggcgtggcgtgcgacagctggaggctggcggtggaggcgcacaacgtgatccggtg 5558964 Query: 274 gaggacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccattt 333 || ||||||||| || |||||||||||||||||||||||||||||||||||| |||| | Sbjct: 5558963 gaagacggtgccggccagctgcgagggctacgtcggccactacatgctcggcggccacta 5558904 Query: 334 ccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagct 393 |||||||||||| | ||||| ||||| ||||| ||||||| || ||| ||||||||| Sbjct: 5558903 ccgccgcgactcaccg-tcgtcgtcgacgaggccatcgcctacgtggacagcctcaagct 5558845 Query: 394 cgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacct 453 ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 5558844 cgccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacct 5558785 Query: 454 cccctactacgccnagcacggcttcggg 481 |||||||| |||| ||||||| |||||| Sbjct: 5558784 cccctacttcgccaagcacggattcggg 5558757 Score = 244 bits (123), Expect = 3e-61 Identities = 234/269 (86%), Gaps = 2/269 (0%) Strand = Plus / Minus Query: 214 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 273 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 5550747 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 5550688 Query: 274 gaggacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 332 |||||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 5550687 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 5550629 Query: 333 tccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 392 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 5550628 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 5550569 Query: 393 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 452 |||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||||| Sbjct: 5550568 tcgccggcaatggcaaggagatctgggtgttcgacatcgacgagacctctctctccaacc 5550509 Query: 453 tcccctactacgccnagcacggcttcggg 481 |||||||||||||| |||||||||||||| Sbjct: 5550508 tcccctactacgccaagcacggcttcggg 5550480 Score = 228 bits (115), Expect = 2e-56 Identities = 231/269 (85%), Gaps = 1/269 (0%) Strand = Plus / Minus Query: 214 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 273 |||||| |||||||||||||||||| ||| || |||||||| ||||||||| | || Sbjct: 5572645 cgccggcgtggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtg 5572586 Query: 274 gaggacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcag-ccatt 332 || ||||||||| || || |||||||||||||||||||||||||||||||| | ||| | Sbjct: 5572585 gaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccact 5572526 Query: 333 tccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 392 |||||| |||||| |||||||||||| ||||| ||||||| | ||| |||| ||| Sbjct: 5572525 accgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagc 5572466 Query: 393 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 452 || ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 5572465 tctccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacc 5572406 Query: 453 tcccctactacgccnagcacggcttcggg 481 |||||||||||||| ||||||| |||||| Sbjct: 5572405 tcccctactacgccaagcacggattcggg 5572377 Score = 103 bits (52), Expect = 6e-19 Identities = 122/146 (83%) Strand = Plus / Minus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || |||||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5429968 gccgcgactccgatgtggtcatcaacaaggccatcgcctacgccgagagcctcaagctct 5429909 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 455 ||||| | ||||||||| ||||||| ||||||||||||||||||||||||| || ||| | Sbjct: 5429908 ccggccatggcaaggagatctgggtgttcgacatcgacgagaccaccctcttcaccctgc 5429849 Query: 456 cctactacgccnagcacggcttcggg 481 ||||| | ||| |||| |||| |||| Sbjct: 5429848 cctaccaggccaagcatggctacggg 5429823 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 154 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 208 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5559095 cgaggccgtggtggcgccgctcatccacgcgctgcggccgctgctgggctccggc 5559041 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 154 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 208 |||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 5572717 cgaggccgtggtggcgccgatcatccacgcgctgcggccgctgctgggctccggc 5572663 Score = 77.8 bits (39), Expect = 3e-11 Identities = 115/141 (81%) Strand = Plus / Minus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5472704 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 5472645 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 455 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 5472644 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 5472585 Query: 456 cctactacgccnagcacggct 476 ||||| | ||| |||| |||| Sbjct: 5472584 cctaccaggccaagcatggct 5472564 Score = 77.8 bits (39), Expect = 3e-11 Identities = 95/114 (83%) Strand = Plus / Minus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5453573 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 5453514 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctcca 449 |||||| ||||||||||||||||| |||||| ||||||||||| | ||||||| Sbjct: 5453513 ccggcagtggcaaggaggtctgggtgttcgacgtcgacgagaccgcactctcca 5453460 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 154 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 208 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 5550819 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 5550765 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 385 cctcaagctcgccggcaacggcaaggaggtctg 417 |||||||||| ||||||| |||||||||||||| Sbjct: 5464306 cctcaagctctccggcaatggcaaggaggtctg 5464274 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 385 cctcaagctcgccggcaacggcaaggagg 413 ||||| |||||||||||||| |||||||| Sbjct: 22709211 cctcatgctcgccggcaacgtcaaggagg 22709183
>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full insert sequence Length = 1076 Score = 248 bits (125), Expect = 2e-62 Identities = 254/295 (86%), Gaps = 2/295 (0%) Strand = Plus / Plus Query: 214 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 273 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 244 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 303 Query: 274 gaggacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 332 |||||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 304 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 362 Query: 333 tccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 392 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 363 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 422 Query: 393 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 452 |||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||||| Sbjct: 423 tcgccggcaatggcaaggagatctgggtgttcgacatcgacgagacctctctctccaacc 482 Query: 453 tcccctactacgccnagcacggcttcggggctacaccgttcaacgcgaccagctt 507 |||||||||||||| ||||||||||||| || || || | ||||||||| ||||| Sbjct: 483 tcccctactacgccaagcacggcttcggagcaacgccatacaacgcgacaagctt 537 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 154 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 208 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 172 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 226
>dbj|AK066719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082K18, full insert sequence Length = 2143 Score = 244 bits (123), Expect = 3e-61 Identities = 234/269 (86%), Gaps = 2/269 (0%) Strand = Plus / Plus Query: 214 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 273 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 242 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 301 Query: 274 gaggacggtgcccg-cgagctgcgagggctacgtcggccactacatgctcggcagccatt 332 |||||||||||| | |||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 302 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 360 Query: 333 tccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 392 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 361 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 420 Query: 393 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 452 |||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||||| Sbjct: 421 tcgccggcaatggcaaggagatctgggtgttcgacatcgacgagacctctctctccaacc 480 Query: 453 tcccctactacgccnagcacggcttcggg 481 |||||||||||||| |||||||||||||| Sbjct: 481 tcccctactacgccaagcacggcttcggg 509 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 154 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 208 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 170 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 224
>dbj|AK110669.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-F12, full insert sequence Length = 953 Score = 242 bits (122), Expect = 1e-60 Identities = 233/268 (86%), Gaps = 2/268 (0%) Strand = Plus / Plus Query: 214 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 273 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 244 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 303 Query: 274 gaggacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 332 |||||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 304 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 362 Query: 333 tccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 392 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 363 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 422 Query: 393 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 452 |||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||||| Sbjct: 423 tcgccggcaatggcaaggagatctgggtgttcgacatcgacgagacctctctctccaacc 482 Query: 453 tcccctactacgccnagcacggcttcgg 480 |||||||||||||| ||||||||||||| Sbjct: 483 tcccctactacgccaagcacggcttcgg 510 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 154 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 208 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 172 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 226
>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full insert sequence Length = 1131 Score = 236 bits (119), Expect = 6e-59 Identities = 286/341 (83%), Gaps = 1/341 (0%) Strand = Plus / Plus Query: 214 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 273 |||||| |||||||||||||||||| ||| || |||||||| ||||||||| | || Sbjct: 217 cgccggcgtggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtg 276 Query: 274 gaggacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcag-ccatt 332 || ||||||||| || || |||||||||||||||||||||||||||||||| | ||| | Sbjct: 277 gaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccact 336 Query: 333 tccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 392 |||||| |||||| |||||||||||| ||||| ||||||| | ||| |||| ||| Sbjct: 337 accgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagc 396 Query: 393 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 452 || ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 397 tctccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacc 456 Query: 453 tcccctactacgccnagcacggcttcggggctacaccgttcaacgcgaccagcttcaacg 512 |||||||||||||| ||||||| ||||| ||||||| || ||| | || |||||| || Sbjct: 457 tcccctactacgccaagcacggattcggagctacactgtacaatgatacgagcttccgcg 516 Query: 513 catacgtgctacaggggagcgcgccagccctgccggagacg 553 ||||||| | ||||||||||| || |||||||||||| Sbjct: 517 aatacgtggcggaagggagcgcgccggcgctgccggagacg 557 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 154 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 208 |||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 145 cgaggccgtggtggcgccgatcatccacgcgctgcggccgctgctgggctccggc 199
>gb|AY106317.1| Zea mays PCO101473 mRNA sequence Length = 827 Score = 147 bits (74), Expect = 4e-32 Identities = 171/204 (83%) Strand = Plus / Plus Query: 334 ccgccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagct 393 |||||| |||||| |||||||||||| ||||| ||||||| | ||| ||||||||| Sbjct: 11 ccgccgggactcccgcgtcgtcatcgacgaggccatcgcctacgccgagggcctcaagct 70 Query: 394 cgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacct 453 | |||||||||||||||||||||||||||||| ||||||||||| |||||||||| || Sbjct: 71 gggcggcaacggcaaggaggtctgggtcttcgatatcgacgagacgtccctctccaatct 130 Query: 454 cccctactacgccnagcacggcttcggggctacaccgttcaacgcgaccagcttcaacgc 513 ||||||||| ||| ||||||||||| ||| | | ||||||||| |||||||||| Sbjct: 131 cccctactatgccacccacggcttcggcactaagctatacaacgcgacgagcttcaacga 190 Query: 514 atacgtgctacaggggagcgcgcc 537 |||||||| ||||||||||||| Sbjct: 191 gtacgtgctggaggggagcgcgcc 214
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 103 bits (52), Expect = 6e-19 Identities = 122/146 (83%) Strand = Plus / Minus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || |||||| || ||||| ||||||| | ||| |||||||||| Sbjct: 116642 gccgcgactccgatgtggtcatcaacaaggccatcgcctacgccgagagcctcaagctct 116583 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 455 ||||| | ||||||||| ||||||| ||||||||||||||||||||||||| || ||| | Sbjct: 116582 ccggccatggcaaggagatctgggtgttcgacatcgacgagaccaccctcttcaccctgc 116523 Query: 456 cctactacgccnagcacggcttcggg 481 ||||| | ||| |||| |||| |||| Sbjct: 116522 cctaccaggccaagcatggctacggg 116497 Score = 77.8 bits (39), Expect = 3e-11 Identities = 95/114 (83%) Strand = Plus / Minus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 140247 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 140188 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctcca 449 |||||| ||||||||||||||||| |||||| ||||||||||| | ||||||| Sbjct: 140187 ccggcagtggcaaggaggtctgggtgttcgacgtcgacgagaccgcactctcca 140134 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 385 cctcaagctcgccggcaacggcaaggaggtctg 417 |||||||||| ||||||| |||||||||||||| Sbjct: 150980 cctcaagctctccggcaatggcaaggaggtctg 150948
>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full insert sequence Length = 1168 Score = 77.8 bits (39), Expect = 3e-11 Identities = 115/141 (81%) Strand = Plus / Plus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 455 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 375 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 434 Query: 456 cctactacgccnagcacggct 476 ||||| | ||| |||| |||| Sbjct: 435 cctaccaggccaagcatggct 455
>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full insert sequence Length = 1081 Score = 77.8 bits (39), Expect = 3e-11 Identities = 115/141 (81%) Strand = Plus / Plus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 455 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 375 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 434 Query: 456 cctactacgccnagcacggct 476 ||||| | ||| |||| |||| Sbjct: 435 cctaccaggccaagcatggct 455
>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full insert sequence Length = 1081 Score = 77.8 bits (39), Expect = 3e-11 Identities = 115/141 (81%) Strand = Plus / Plus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 455 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 375 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 434 Query: 456 cctactacgccnagcacggct 476 ||||| | ||| |||| |||| Sbjct: 435 cctaccaggccaagcatggct 455
>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full insert sequence Length = 1081 Score = 77.8 bits (39), Expect = 3e-11 Identities = 115/141 (81%) Strand = Plus / Plus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 455 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 375 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 434 Query: 456 cctactacgccnagcacggct 476 ||||| | ||| |||| |||| Sbjct: 435 cctaccaggccaagcatggct 455
>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full insert sequence Length = 1100 Score = 77.8 bits (39), Expect = 3e-11 Identities = 95/114 (83%) Strand = Plus / Plus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 291 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 350 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctcca 449 |||||| ||||||||||||||||| |||||| ||||||||||| | ||||||| Sbjct: 351 ccggcagtggcaaggaggtctgggtgttcgacgtcgacgagaccgcactctcca 404
>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full insert sequence Length = 1096 Score = 77.8 bits (39), Expect = 3e-11 Identities = 115/141 (81%) Strand = Plus / Plus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 455 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 375 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 434 Query: 456 cctactacgccnagcacggct 476 ||||| | ||| |||| |||| Sbjct: 435 cctaccaggccaagcatggct 455
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 77.8 bits (39), Expect = 3e-11 Identities = 95/114 (83%) Strand = Plus / Minus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 7904 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 7845 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctcca 449 |||||| ||||||||||||||||| |||||| ||||||||||| | ||||||| Sbjct: 7844 ccggcagtggcaaggaggtctgggtgttcgacgtcgacgagaccgcactctcca 7791 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 385 cctcaagctcgccggcaacggcaaggaggtctg 417 |||||||||| ||||||| |||||||||||||| Sbjct: 18637 cctcaagctctccggcaatggcaaggaggtctg 18605
>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0023G10, complete sequence Length = 36253 Score = 77.8 bits (39), Expect = 3e-11 Identities = 115/141 (81%) Strand = Plus / Minus Query: 336 gccgcgactccnaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 395 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 26144 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 26085 Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 455 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 26084 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 26025 Query: 456 cctactacgccnagcacggct 476 ||||| | ||| |||| |||| Sbjct: 26024 cctaccaggccaagcatggct 26004
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 5e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 416 tgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgccnagcacgg 474 ||||| |||||| |||||||||| ||||||||||||||||||||||||| | ||||| Sbjct: 2088139 tgggtgttcgacgtcgacgagacgctcctctccaacctcccctactacgccgaccacgg 2088197
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 63.9 bits (32), Expect = 5e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 416 tgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgccnagcacgg 474 ||||| |||||| |||||||||| ||||||||||||||||||||||||| | ||||| Sbjct: 109001 tgggtgttcgacgtcgacgagacgctcctctccaacctcccctactacgccgaccacgg 109059
>dbj|AK058604.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A01, full insert sequence Length = 1313 Score = 63.9 bits (32), Expect = 5e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 416 tgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgccnagcacgg 474 ||||| |||||| |||||||||| ||||||||||||||||||||||||| | ||||| Sbjct: 622 tgggtgttcgacgtcgacgagacgctcctctccaacctcccctactacgccgaccacgg 680
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 162 tggtggcgccgctgatccacgcgctgcggccgc 194 ||||||||||||||||| ||||||||| ||||| Sbjct: 1077692 tggtggcgccgctgatcgacgcgctgctgccgc 1077724
>ref|XM_473513.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 443 ctctccaacctcccctactacgcc 466 |||||||||||||||||||||||| Sbjct: 31 ctctccaacctcccctactacgcc 54
>ref|NM_183670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 195 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 443 ctctccaacctcccctactacgcc 466 |||||||||||||||||||||||| Sbjct: 31 ctctccaacctcccctactacgcc 54
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 443 ctctccaacctcccctactacgcc 466 |||||||||||||||||||||||| Sbjct: 28254146 ctctccaacctcccctactacgcc 28254169
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 443 ctctccaacctcccctactacgcc 466 |||||||||||||||||||||||| Sbjct: 10940680 ctctccaacctcccctactacgcc 10940657 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 415 ctgggtcttcgacatcgacgagaccaccctctcc 448 |||||| |||||| ||||||||||| |||||||| Sbjct: 4872197 ctgggtgttcgacgtcgacgagaccgccctctcc 4872164 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 aagctcgccggcaacggcaaggag 412 |||| ||||||||||||||||||| Sbjct: 25497807 aagcccgccggcaacggcaaggag 25497784 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gccgacgtcggcggcggacg 149 |||||||||||||||||||| Sbjct: 9253184 gccgacgtcggcggcggacg 9253165 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgaggcggtggtggcgccgc 173 |||||||||||||||||||| Sbjct: 7627981 cgaggcggtggtggcgccgc 7628000
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 443 ctctccaacctcccctactacgcc 466 |||||||||||||||||||||||| Sbjct: 127696 ctctccaacctcccctactacgcc 127673
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487H02 Length = 145491 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 443 ctctccaacctcccctactacgcc 466 |||||||||||||||||||||||| Sbjct: 43522 ctctccaacctcccctactacgcc 43499
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 443 ctctccaacctcccctactacgcc 466 |||||||||||||||||||||||| Sbjct: 46454 ctctccaacctcccctactacgcc 46477
>ref|NM_119070.2| Arabidopsis thaliana acid phosphatase AT4G29260 mRNA, complete cds Length = 1096 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 438 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 490 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 532
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 158 gcggtggtggcgccgctgatcca 180 ||||||||||||||||||||||| Sbjct: 141389 gcggtggtggcgccgctgatcca 141367
>gb|BT015481.1| Arabidopsis thaliana At4g29260 mRNA sequence Length = 690 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 438 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 218 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 260
>gb|AY091175.1| Arabidopsis thaliana putative acid phosphatase (At4g29260) mRNA, complete cds Length = 799 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 438 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 296 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 338
>gb|AY050945.1| Arabidopsis thaliana putative acid phosphatase (At4g29260) mRNA, complete cds Length = 914 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 438 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 307 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 349
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 438 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 151194 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 151152
>emb|BX828948.1|CNS0A3HO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL53ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 895 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 438 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 318 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 360
>emb|BX828856.1|CNS0A3GL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 843 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 438 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 291 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 333
>emb|BX828696.1|CNS0A2F9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL30ZA03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 815 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 396 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 438 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 264 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 306
>ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 415 ctgggtcttcgacatcgacgagaccaccctctcc 448 |||||| |||||| ||||||||||| |||||||| Sbjct: 375 ctgggtgttcgacgtcgacgagaccgccctctcc 408
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 415 ctgggtcttcgacatcgacgagaccaccctctcc 448 |||||| |||||| ||||||||||| |||||||| Sbjct: 116846 ctgggtgttcgacgtcgacgagaccgccctctcc 116813
>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 415 ctgggtcttcgacatcgacgagaccaccctctcc 448 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full insert sequence Length = 1094 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 415 ctgggtcttcgacatcgacgagaccaccctctcc 448 |||||| |||||| ||||||||||| |||||||| Sbjct: 397 ctgggtgttcgacgtcgacgagaccgccctctcc 430
>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 415 ctgggtcttcgacatcgacgagaccaccctctcc 448 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full insert sequence Length = 1308 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 415 ctgggtcttcgacatcgacgagaccaccctctcc 448 |||||| |||||| ||||||||||| |||||||| Sbjct: 611 ctgggtgttcgacgtcgacgagaccgccctctcc 644
>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 415 ctgggtcttcgacatcgacgagaccaccctctcc 448 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full insert sequence Length = 1114 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 415 ctgggtcttcgacatcgacgagaccaccctctcc 448 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 184 gctgcggccgctgctgggctccggcaagca 213 |||||||||||||||||||| || |||||| Sbjct: 1858796 gctgcggccgctgctgggcttcgacaagca 1858825 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 gccgacgtcggcggcggacgtg 151 |||||||||||||||||||||| Sbjct: 90574 gccgacgtcggcggcggacgtg 90595
>ref|XM_475387.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 385 cctcaagctcgccggcaacggcaaggagg 413 ||||| |||||||||||||| |||||||| Sbjct: 486 cctcatgctcgccggcaacgtcaaggagg 514
>ref|XM_477966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 525 aggggagcgcgccagccctgccggagacg 553 ||||||||||||| || |||||||||||| Sbjct: 56 aggggagcgcgccggcgctgccggagacg 84
>ref|XM_477962.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 157 ggcggtggtggcgccgctgatccacgcgc 185 |||||||| ||||||||||||| |||||| Sbjct: 57 ggcggtggcggcgccgctgatcgacgcgc 85
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 385 cctcaagctcgccggcaacggcaaggagg 413 ||||| |||||||||||||| |||||||| Sbjct: 64410 cctcatgctcgccggcaacgtcaaggagg 64382
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 385 cctcaagctcgccggcaacggcaaggagg 413 ||||| |||||||||||||| |||||||| Sbjct: 18768 cctcatgctcgccggcaacgtcaaggagg 18740
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctgcggccgctgctgggctccggca 209 |||||||||||||||||||| |||| Sbjct: 4476736 ctgcggccgctgctgggctcgggca 4476712
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 gcgctgcggccgctgctgggctccg 206 ||||||||||||||||||| ||||| Sbjct: 966839 gcgctgcggccgctgctggactccg 966815
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 525 aggggagcgcgccagccctgccggagacg 553 ||||||||||||| || |||||||||||| Sbjct: 16055497 aggggagcgcgccggcgctgccggagacg 16055525 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 157 ggcggtggtggcgccgctgatccacgcgc 185 |||||||| ||||||||||||| |||||| Sbjct: 15937457 ggcggtggcggcgccgctgatcgacgcgc 15937485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cctcaagctcgccggcaacg 404 |||||||||||||||||||| Sbjct: 20676288 cctcaagctcgccggcaacg 20676307
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 ccacgcgctgcggccgctgct 198 ||||||||||||||||||||| Sbjct: 7463181 ccacgcgctgcggccgctgct 7463201
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcggcggacgtggacgaggcg 160 ||||||||||||||||||||| Sbjct: 4785906 gcggcggacgtggacgaggcg 4785886 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 caacgcgaccagcttcaacg 512 |||||||||||||||||||| Sbjct: 768764 caacgcgaccagcttcaacg 768783
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F09 Length = 166568 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 525 aggggagcgcgccagccctgccggagacg 553 ||||||||||||| || |||||||||||| Sbjct: 25830 aggggagcgcgccggcgctgccggagacg 25858
>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13 Length = 179669 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 157 ggcggtggtggcgccgctgatccacgcgc 185 |||||||| ||||||||||||| |||||| Sbjct: 176971 ggcggtggcggcgccgctgatcgacgcgc 176999
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 525 aggggagcgcgccagccctgccggagacg 553 ||||||||||||| || |||||||||||| Sbjct: 136899 aggggagcgcgccggcgctgccggagacg 136927 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 157 ggcggtggtggcgccgctgatccacgcgc 185 |||||||| ||||||||||||| |||||| Sbjct: 18859 ggcggtggcggcgccgctgatcgacgcgc 18887
>dbj|AK112061.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-G08, full insert sequence Length = 903 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 157 ggcggtggtggcgccgctgatccacgcgc 185 |||||||| ||||||||||||| |||||| Sbjct: 123 ggcggtggcggcgccgctgatcgacgcgc 151
>dbj|AK070343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052E24, full insert sequence Length = 1097 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 385 cctcaagctcgccggcaacggcaaggagg 413 ||||| |||||||||||||| |||||||| Sbjct: 601 cctcatgctcgccggcaacgtcaaggagg 629
>ref|XM_508594.1| PREDICTED: Pan troglodytes similar to KIAA1394 protein (LOC451368), mRNA Length = 4191 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gacgaggcggtggtggcgccgctg 175 ||||||||||||| |||||||||| Sbjct: 1987 gacgaggcggtggcggcgccgctg 2010
>ref|NM_188032.1| Oryza sativa (japonica cultivar-group), Ozsa8452 predicted mRNA Length = 1767 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gccgacgtcggcggcggacg 149 |||||||||||||||||||| Sbjct: 1617 gccgacgtcggcggcggacg 1636
>ref|NM_188686.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 369 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cgaggcggtggtggcgccgc 173 |||||||||||||||||||| Sbjct: 304 cgaggcggtggtggcgccgc 285
>ref|XM_482470.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcggtggtggcg 169 |||||| ||||||||||| |||||||| |||| Sbjct: 275 cggcggaggacgtggacgcggcggtggcggcg 306
>ref|XM_470115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1860 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 ctcctcctcgtcgccgcagctctcctcgcggc 96 |||||||||||| |||| || ||||||||||| Sbjct: 108 ctcctcctcgtctccgccgcgctcctcgcggc 139
>ref|XM_469899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3159 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtcggcggcggacgtggac 154 |||||||||||||||||||| Sbjct: 395 cgtcggcggcggacgtggac 414
>ref|NM_196414.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0060A14.4), mRNA Length = 537 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcgg 161 ||||||||| |||||||||||||| Sbjct: 86 cggcggcggtcgtggacgaggcgg 109
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 ccgctgatccacgcgctgcggccg 193 ||||||||||||||||||| |||| Sbjct: 106983 ccgctgatccacgcgctgccgccg 107006
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cctcaagctcgccggcaacg 404 |||||||||||||||||||| Sbjct: 264 cctcaagctcgccggcaacg 283
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cctcaagctcgccggcaacg 404 |||||||||||||||||||| Sbjct: 356 cctcaagctcgccggcaacg 375
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cgccgcagctctcctcgcgg 95 |||||||||||||||||||| Sbjct: 529452 cgccgcagctctcctcgcgg 529471
>gb|AY492273.1| Corynebacterium vitaeruminis strain CIP 827 RpoB (rpoB) gene, partial cds Length = 3296 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gcacgccggagtggcgtgcg 230 |||||||||||||||||||| Sbjct: 127 gcacgccggagtggcgtgcg 146
>gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, complete sequence Length = 178150 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 gcaaggaggtctgggtcttc 424 |||||||||||||||||||| Sbjct: 4652 gcaaggaggtctgggtcttc 4633
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ctcctcctcgtcgccgcagc 84 |||||||||||||||||||| Sbjct: 2526152 ctcctcctcgtcgccgcagc 2526171
>ref|XM_368159.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01085.4) partial mRNA Length = 747 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gagcgcgccagccctgccgg 548 |||||||||||||||||||| Sbjct: 450 gagcgcgccagccctgccgg 431
>gb|AY658948.1| Synthetic construct Peudomonas aeruginosa clone FLH046900.01F PA1060 gene, partial cds Length = 906 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 cacgcgctgcggccgctgctgggc 202 ||||||| |||||||||||||||| Sbjct: 439 cacgcgccgcggccgctgctgggc 462
>gb|AC122548.10| Mus musculus chromosome 19, clone RP23-273O15, complete sequence Length = 189169 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 gcaaggaggtctgggtcttc 424 |||||||||||||||||||| Sbjct: 182845 gcaaggaggtctgggtcttc 182826
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 ctcctcctcgtcgccgcagctctcctcgcggc 96 |||||||||||| |||| || ||||||||||| Sbjct: 34030982 ctcctcctcgtctccgccgcgctcctcgcggc 34031013 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtcggcggcggacgtggac 154 |||||||||||||||||||| Sbjct: 31415004 cgtcggcggcggacgtggac 31415023
>ref|XM_756140.1| Ustilago maydis 521 hypothetical protein (UM05086.1) partial mRNA Length = 5505 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ggcggtggtggcgccgctga 176 |||||||||||||||||||| Sbjct: 2532 ggcggtggtggcgccgctga 2513
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gctcgccggcaacggcaagg 410 |||||||||||||||||||| Sbjct: 2526359 gctcgccggcaacggcaagg 2526378
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcgg 161 ||||||||| |||||||||||||| Sbjct: 171752 cggcggcggtcgtggacgaggcgg 171775
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cgtcggcggcggacgtggac 154 |||||||||||||||||||| Sbjct: 80796 cgtcggcggcggacgtggac 80777
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 cggcggcggacgtggacgaggcgg 161 ||||||||| |||||||||||||| Sbjct: 4790 cggcggcggtcgtggacgaggcgg 4767
>emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid contig 29E8 Length = 197698 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggacgtggacgaggcggtggtggc 168 |||||||| ||||||||||||||| Sbjct: 4142 ggacgtggtcgaggcggtggtggc 4119
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24 Length = 304450 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cggcagccatttccgccgcg 341 |||||||||||||||||||| Sbjct: 13266 cggcagccatttccgccgcg 13285
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtcgtcatcgaccaggccctcgcc 373 |||||||||||| ||||||||||| Sbjct: 195232 gtcgtcatcgacaaggccctcgcc 195255
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 gacgacgctcctcctcgtcgccgc 81 |||| ||||||||||||||||||| Sbjct: 156475 gacgccgctcctcctcgtcgccgc 156452
>dbj|AK127616.1| Homo sapiens cDNA FLJ45714 fis, clone FEKID2002637, highly similar to Serine/threonine protein phosphatase PP1-alpha 1 catalytic subunit (EC 3.1.3.16) Length = 1685 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 gacgaggcggtggtggcgccgctg 175 ||||||||||||| |||||||||| Sbjct: 111 gacgaggcggtggcggcgccgctg 88
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgctgcggccgctgctgggc 202 |||||||||||||||||||| Sbjct: 1724968 cgctgcggccgctgctgggc 1724987 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 catgccgacgtcggcggcgg 146 |||||||||||||||||||| Sbjct: 27426 catgccgacgtcggcggcgg 27407
>ref|XM_941962.1| PREDICTED: Homo sapiens KIAA1394 protein, transcript variant 3 (KIAA1394), mRNA Length = 5056 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gacgaggcggtggtggcgccgctg 175 ||||||||||||| |||||||||| Sbjct: 2682 gacgaggcggtggcggcgccgctg 2705
>ref|XM_208522.5| PREDICTED: Homo sapiens KIAA1394 protein, transcript variant 1 (KIAA1394), mRNA Length = 5055 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gacgaggcggtggtggcgccgctg 175 ||||||||||||| |||||||||| Sbjct: 2682 gacgaggcggtggcggcgccgctg 2705
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ggacgaggcggtggtggcgc 170 |||||||||||||||||||| Sbjct: 125683 ggacgaggcggtggtggcgc 125664
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcgg 161 ||||||||| |||||||||||||| Sbjct: 17880 cggcggcggtcgtggacgaggcgg 17903
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 cggtggtggcgccgctgatccacg 182 ||||||||||| |||||||||||| Sbjct: 429845 cggtggtggcggcgctgatccacg 429822
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcgg 161 |||||||||||||||||| ||||| Sbjct: 66182 cggcggcggacgtggacgcggcgg 66205
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcgg 161 ||||||||| |||||||||||||| Sbjct: 13325503 cggcggcggtcgtggacgaggcgg 13325526
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcggtggtggcg 169 |||||| ||||||||||| |||||||| |||| Sbjct: 20372954 cggcggaggacgtggacgcggcggtggcggcg 20372985
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 ctcctcctcgtcgccgcagctctcctcgcggc 96 |||||||||||| |||| || ||||||||||| Sbjct: 34121454 ctcctcctcgtctccgccgcgctcctcgcggc 34121485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtcggcggcggacgtggac 154 |||||||||||||||||||| Sbjct: 31505520 cgtcggcggcggacgtggac 31505539
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 65 ctcctcctcgtcgccgcagctctcctcgcggc 96 |||||||||||| |||| || ||||||||||| Sbjct: 26709 ctcctcctcgtctccgccgcgctcctcgcggc 26678
>gb|AE004950.1| Pseudomonas aeruginosa PAO1, section 511 of 529 of the complete genome Length = 11213 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cgcgctgcggccgctgctgg 200 |||||||||||||||||||| Sbjct: 5973 cgcgctgcggccgctgctgg 5954
>gb|AE004505.1| Pseudomonas aeruginosa PAO1, section 66 of 529 of the complete genome Length = 11421 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gccgctgatccacgcgctgc 188 |||||||||||||||||||| Sbjct: 511 gccgctgatccacgcgctgc 530
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgaggcggtggtggcgccgc 173 |||||||||||||||||||| Sbjct: 38557 cgaggcggtggtggcgccgc 38576
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gccgacgtcggcggcggacg 149 |||||||||||||||||||| Sbjct: 29778 gccgacgtcggcggcggacg 29759
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gccgacgtcggcggcggacg 149 |||||||||||||||||||| Sbjct: 153566 gccgacgtcggcggcggacg 153547
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 aagctcgccggcaacggcaaggag 412 |||| ||||||||||||||||||| Sbjct: 25410 aagcccgccggcaacggcaaggag 25387
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcggtggtggcg 169 |||||| ||||||||||| |||||||| |||| Sbjct: 120702 cggcggaggacgtggacgcggcggtggcggcg 120733
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cctcaagctcgccggcaacg 404 |||||||||||||||||||| Sbjct: 29038 cctcaagctcgccggcaacg 29057
>emb|X87247.1|PVULSGENE Pseudorabies virus UL21, UL20 & UL19 genes Length = 3797 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcgg 161 |||||||||||||||||| ||||| Sbjct: 2450 cggcggcggacgtggacgcggcgg 2473
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcggtggtggcg 169 |||||| ||||||||||| |||||||| |||| Sbjct: 3584 cggcggaggacgtggacgcggcggtggcggcg 3615
>dbj|AK121701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073G17, full insert sequence Length = 2041 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 ctcctcctcgtcgccgcagctctcctcgcggc 96 |||||||||||| |||| || ||||||||||| Sbjct: 114 ctcctcctcgtctccgccgcgctcctcgcggc 145
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cctcaagctcgccggcaacg 404 |||||||||||||||||||| Sbjct: 356 cctcaagctcgccggcaacg 375
>dbj|AK109991.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-E07, full insert sequence Length = 3419 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ggacgaggcggtggtggcgc 170 |||||||||||||||||||| Sbjct: 2514 ggacgaggcggtggtggcgc 2533
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cctcaagctcgccggcaacg 404 |||||||||||||||||||| Sbjct: 359 cctcaagctcgccggcaacg 378
>dbj|AK071221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088C02, full insert sequence Length = 1807 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcggtggtggcg 169 |||||| ||||||||||| |||||||| |||| Sbjct: 275 cggcggaggacgtggacgcggcggtggcggcg 306
>dbj|AK064366.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-C03, full insert sequence Length = 1540 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 ctcctcctcgtcgccgcagctctcctcgcggc 96 |||||||||||| |||| || ||||||||||| Sbjct: 77 ctcctcctcgtctccgccgcgctcctcgcggc 108
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 caagctcgccggcaacggca 407 |||||||||||||||||||| Sbjct: 316528 caagctcgccggcaacggca 316547
>dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-1337H24, complete sequence Length = 168565 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gacgaggcggtggtggcgccgctg 175 ||||||||||||| |||||||||| Sbjct: 101538 gacgaggcggtggcggcgccgctg 101561
>dbj|AB096083.1| Oryza sativa (japonica cultivar-group) BADH2 mRNA for betaine aldehyde dehydrogenase, complete cds Length = 1512 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcggtggtggcg 169 |||||| ||||||||||| |||||||| |||| Sbjct: 128 cggcggaggacgtggacgcggcggtggcggcg 159
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcgg 161 ||||||||| |||||||||||||| Sbjct: 13332843 cggcggcggtcgtggacgaggcgg 13332866
>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete sequence Length = 209214 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 cagctgggtgctgggggtgg 251 |||||||||||||||||||| Sbjct: 36203 cagctgggtgctgggggtgg 36184
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggacgtggacgaggcggtggtggc 168 |||||||| ||||||||||||||| Sbjct: 1558061 ggacgtggccgaggcggtggtggc 1558084
>gb|L37531.1|STMPGLYZ Streptomyces coelicolor bacteriophage (phiC31) resistance (pglY and pglZ) genes, complete cds's Length = 9461 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtcgtcatcgaccaggccctcgcc 373 |||||||||||| ||||||||||| Sbjct: 2919 gtcgtcatcgacaaggccctcgcc 2942
>gb|L00676.1|SH1ULGNS Pseudorabies virus (Suid herpesvirus 1) UL18 through UL21 genes, complete cds and UL15 gene, 3' end Length = 9382 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 cggcggcggacgtggacgaggcgg 161 |||||||||||||||||| ||||| Sbjct: 2450 cggcggcggacgtggacgcggcgg 2473
>gb|M95285.1|SH1UL2XA Suid herpesvirus 1 genes homologous to HSV1 UL20 and UL21 genes, complete cds; and major capsid protein gene, 3' end Length = 2510 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 cggcggcggacgtggacgaggcgg 161 |||||||||||||||||| ||||| Sbjct: 730 cggcggcggacgtggacgcggcgg 707
>dbj|AB037815.1| Homo sapiens mRNA for KIAA1394 protein, partial cds Length = 5065 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gacgaggcggtggtggcgccgctg 175 ||||||||||||| |||||||||| Sbjct: 2688 gacgaggcggtggcggcgccgctg 2711 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,973,778 Number of Sequences: 3902068 Number of extensions: 2973778 Number of successful extensions: 74148 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71001 Number of HSP's gapped (non-prelim): 3127 length of query: 553 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 530 effective length of database: 17,143,297,704 effective search space: 9085947783120 effective search space used: 9085947783120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
