ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart11h02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC104184.2| Homo sapiens chromosome 3 clone RP11-188P20, complete sequence Length = 143034 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 20 tgttgttcaagaagagaagaaagaggcc 47 |||||||||||||||||| ||||||||| Sbjct: 61701 tgttgttcaagaagagaataaagaggcc 61674 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 53 tgttgttcaagaagacaagaaagaggcc 80 ||||||||||||||| || ||||||||| Sbjct: 61701 tgttgttcaagaagagaataaagaggcc 61674 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 tgttgttcaagaagacaagaaagaggcc 113 ||||||||||||||| || ||||||||| Sbjct: 61701 tgttgttcaagaagagaataaagaggcc 61674
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence Length = 189102 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 agagaagaaagaggccgacactgttg 57 |||||||||||||| ||||||||||| Sbjct: 100968 agagaagaaagagggcgacactgttg 100943
>gb|AF296094.1| Porcine teschovirus 9 strain Vir 2899/84 polyprotein gene, complete cds Length = 7006 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 435 gtggaagatgaaaagccagctg 456 |||||||||||||||||||||| Sbjct: 6842 gtggaagatgaaaagccagctg 6821
>gb|AC119615.7| Rattus norvegicus 10 NOVECTOR CH230-502G21 (Children's Hospital Oakland Research Institute) complete sequence Length = 156223 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 gagaacaaggaaaacgagaagccag 303 ||||||||||||||||| ||||||| Sbjct: 36594 gagaacaaggaaaacgaaaagccag 36618 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 354 gagaacaaggaaaacgagaagccag 378 ||||||||||||||||| ||||||| Sbjct: 36594 gagaacaaggaaaacgaaaagccag 36618
>ref|NM_183329.3| Rattus norvegicus steroid receptor RNA activator 1 (Sra1), mRNA Length = 945 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 atcttcagaggagaagaaagaagag 557 ||||||||||||||| ||||||||| Sbjct: 638 atcttcagaggagaacaaagaagag 662
>gb|AY542868.1| Rattus norvegicus steroid receptor RNA activator mRNA, complete cds Length = 756 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 atcttcagaggagaagaaagaagag 557 ||||||||||||||| ||||||||| Sbjct: 635 atcttcagaggagaacaaagaagag 659
>gb|AC135086.3| Mus musculus BAC clone RP23-110L10 from chromosome 15, complete sequence Length = 225159 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 actgatgaagatgaaggcaag 224 ||||||||||||||||||||| Sbjct: 53859 actgatgaagatgaaggcaag 53839
>gb|AC113030.5| Mus musculus chromosome 6, clone RP23-211L5, complete sequence Length = 187655 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 536 ttcagaggagaagaaagaagaggca 560 |||||||||| |||||||||||||| Sbjct: 97557 ttcagaggaggagaaagaagaggca 97533
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tgcccaagaagagaagaaaga 175 ||||||||||||||||||||| Sbjct: 122910 tgcccaagaagagaagaaaga 122890
>emb|Z98949.1|HS125H2 Human DNA sequence from clone CTA-125H2 on chromosome 22q11-12, complete sequence Length = 173513 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 catcttcagaggagaagaaag 552 ||||||||||||||||||||| Sbjct: 162198 catcttcagaggagaagaaag 162178
>emb|AL663096.16| Mouse DNA sequence from clone RP23-249K18 on chromosome 11 Contains two novel genes, the gene for a novel protein similar to human GAS2-related protein, the Mmp28 gene for matrix metalloproteinase 28 (epilysin), the 5' end of the Taf15 gene for TAF15 RNA polymerase II TATA box binding protein (TBP)-associated factor and a CpG island, complete sequence Length = 86442 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 gagaacaaggaaaacgagaagccag 378 ||||||||||||||||| ||||||| Sbjct: 68945 gagaacaaggaaaacgaaaagccag 68921 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 gagaacaaggaaaacgagaagccag 303 ||||||||||||||||| ||||||| Sbjct: 68945 gagaacaaggaaaacgaaaagccag 68921
>emb|AL136521.2|SPAPYUG7 S.pombe chromosome I plasmid pYUG7 Length = 10679 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 gccagctgaatttgaagaagt 319 ||||||||||||||||||||| Sbjct: 5864 gccagctgaatttgaagaagt 5844
>emb|AJ310932.1|HSA310932 Homo sapiens MYO18B gene for myosin heavy chain, exons 1-44 Length = 288888 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 catcttcagaggagaagaaag 552 ||||||||||||||||||||| Sbjct: 254779 catcttcagaggagaagaaag 254759
>emb|BX548160.13| Zebrafish DNA sequence from clone DKEY-25G11 in linkage group 11, complete sequence Length = 237930 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 gagaagccagctgaatttgaa 314 ||||||||||||||||||||| Sbjct: 160034 gagaagccagctgaatttgaa 160014
>gb|AC124036.5| Mus Musculus Strain C57BL6/J chromosome 11 BAC Clone RP24-100D7, Complete Sequence, complete sequence Length = 228907 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 gagaacaaggaaaacgagaagccag 378 ||||||||||||||||| ||||||| Sbjct: 219318 gagaacaaggaaaacgaaaagccag 219294 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 gagaacaaggaaaacgagaagccag 303 ||||||||||||||||| ||||||| Sbjct: 219318 gagaacaaggaaaacgaaaagccag 219294
>ref|NM_027427.1| Mus musculus TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf15), mRNA Length = 2050 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 gagaacaaggaaaacgagaagccag 303 ||||||||||||||||| ||||||| Sbjct: 54 gagaacaaggaaaacgaaaagccag 30 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 gagaacaaggaaaacgagaagccag 378 ||||||||||||||||| ||||||| Sbjct: 54 gagaacaaggaaaacgaaaagccag 30
>gb|AF326737.2| Mus musculus sclerostin (Sost) gene, complete cds; and Meox1 gene, partial sequence Length = 81806 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagaggc 559 ||||||||||||||||||||| Sbjct: 42292 agaggagaagaaagaagaggc 42312
>dbj|AK166550.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0016F01 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, full insert sequence Length = 1927 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 gagaacaaggaaaacgagaagccag 303 ||||||||||||||||| ||||||| Sbjct: 46 gagaacaaggaaaacgaaaagccag 22 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 gagaacaaggaaaacgagaagccag 378 ||||||||||||||||| ||||||| Sbjct: 46 gagaacaaggaaaacgaaaagccag 22
>dbj|AK169745.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018A11 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, full insert sequence Length = 1363 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 gagaacaaggaaaacgagaagccag 303 ||||||||||||||||| ||||||| Sbjct: 54 gagaacaaggaaaacgaaaagccag 30 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 gagaacaaggaaaacgagaagccag 378 ||||||||||||||||| ||||||| Sbjct: 54 gagaacaaggaaaacgaaaagccag 30
>emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in linkage group 11, complete sequence Length = 211986 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 gagaagccagctgaatttgaa 314 ||||||||||||||||||||| Sbjct: 139770 gagaagccagctgaatttgaa 139750
>dbj|AK078205.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430508C05 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68 kDa, full insert sequence Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 gagaacaaggaaaacgagaagccag 303 ||||||||||||||||| ||||||| Sbjct: 65 gagaacaaggaaaacgaaaagccag 41 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 gagaacaaggaaaacgagaagccag 378 ||||||||||||||||| ||||||| Sbjct: 65 gagaacaaggaaaacgaaaagccag 41
>gb|AC008686.8| Homo sapiens chromosome 19 clone CTB-5E10, complete sequence Length = 150192 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 345 cttgtatcagagaacaaggaaaacg 369 ||||||||||| ||||||||||||| Sbjct: 62615 cttgtatcagaaaacaaggaaaacg 62639
>ref|NM_001020131.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAPYUG7.03c), partial mRNA Length = 2115 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 gccagctgaatttgaagaagt 319 ||||||||||||||||||||| Sbjct: 579 gccagctgaatttgaagaagt 599
>dbj|AK051568.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130057K06 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68 kDa, full insert sequence Length = 2050 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 gagaacaaggaaaacgagaagccag 303 ||||||||||||||||| ||||||| Sbjct: 54 gagaacaaggaaaacgaaaagccag 30 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 gagaacaaggaaaacgagaagccag 378 ||||||||||||||||| ||||||| Sbjct: 54 gagaacaaggaaaacgaaaagccag 30
>gb|AC068807.21| Mus musculus 11 BAC RP23-346P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 208135 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagaggc 559 ||||||||||||||||||||| Sbjct: 89356 agaggagaagaaagaagaggc 89376
>dbj|AK011843.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610111C21 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68 kDa, full insert sequence Length = 880 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 gagaacaaggaaaacgagaagccag 303 ||||||||||||||||| ||||||| Sbjct: 75 gagaacaaggaaaacgaaaagccag 51 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 gagaacaaggaaaacgagaagccag 378 ||||||||||||||||| ||||||| Sbjct: 75 gagaacaaggaaaacgaaaagccag 51
>gb|AY026354.1| Rattus norvegicus steroid receptor co-activator protein SRAP mRNA, complete cds Length = 893 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 atcttcagaggagaagaaagaagag 557 ||||||||||||||| ||||||||| Sbjct: 586 atcttcagaggagaacaaagaagag 610
>gb|BC091105.1| Rattus norvegicus cDNA clone MGC:108511 IMAGE:7381969, complete cds Length = 1747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 atcttcagaggagaagaaagaagag 557 ||||||||||||||| ||||||||| Sbjct: 1422 atcttcagaggagaacaaagaagag 1446
>gb|AF093117.1|AF093117 Homo sapiens chromosome 7qtelo BAC E3, complete sequence Length = 147216 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 gagaagaaagaagaggcagat 563 ||||||||||||||||||||| Sbjct: 127498 gagaagaaagaagaggcagat 127518
>gb|AC150035.3| Mus musculus BAC clone RP23-348A6 from 16, complete sequence Length = 188444 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tgcccaagaagagaagaaaga 175 ||||||||||||||||||||| Sbjct: 36208 tgcccaagaagagaagaaaga 36188
>emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chromosome 11, complete sequence Length = 187006 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagaggc 559 ||||||||||||||||||||| Sbjct: 168442 agaggagaagaaagaagaggc 168422
>emb|AL807402.1|CNS08CA6 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 437H9 of library RPCI-23 from chromosome 11 of strain C57Bl/6 of Mus musculus (mouse) Length = 205701 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 354 gagaacaaggaaaacgagaagccag 378 ||||||||||||||||| ||||||| Sbjct: 115029 gagaacaaggaaaacgaaaagccag 115005 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 gagaacaaggaaaacgagaagccag 303 ||||||||||||||||| ||||||| Sbjct: 115029 gagaacaaggaaaacgaaaagccag 115005
>ref|NM_102073.1| Arabidopsis thaliana unknown protein AT1G22230 mRNA, complete cds Length = 945 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 tcagaggagaagaaagaaga 556 |||||||||||||||||||| Sbjct: 688 tcagaggagaagaaagaaga 707
>ref|NM_105873.2| Arabidopsis thaliana PATL1 (PATELLIN 1); transporter AT1G72150 (PATL1) mRNA, complete cds Length = 2148 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 517 cagaggagaagaaagaagag 536
>gb|AC100500.10| Mus musculus chromosome 3, clone RP23-143I10, complete sequence Length = 179369 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 137722 agaggagaagaaagaagagg 137703
>gb|AY773817.1| Arabidopsis thaliana clone pENTR221-At1g22230 hypothetical protein (At1g22230) gene, complete cds Length = 945 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 tcagaggagaagaaagaaga 556 |||||||||||||||||||| Sbjct: 688 tcagaggagaagaaagaaga 707
>gb|AC104202.13| Mus musculus chromosome 5, clone RP24-558F5, complete sequence Length = 189841 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 103239 cagaggagaagaaagaagag 103220
>ref|NM_212766.1| Danio rerio RAN binding protein 1 (ranbp1), mRNA Length = 862 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 536 ttcagaggagaagaaagaagaggc 559 ||||||||| |||||||||||||| Sbjct: 665 ttcagaggacaagaaagaagaggc 688
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cactgttgttcaagaagaca 102 |||||||||||||||||||| Sbjct: 188064 cactgttgttcaagaagaca 188045 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cactgttgttcaagaagaca 135 |||||||||||||||||||| Sbjct: 188064 cactgttgttcaagaagaca 188045 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cactgttgttcaagaagaca 69 |||||||||||||||||||| Sbjct: 188064 cactgttgttcaagaagaca 188045
>gb|AY735521.1| Arabidopsis thaliana hypothetical protein AT1G22230 mRNA, complete cds Length = 1289 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 tcagaggagaagaaagaaga 556 |||||||||||||||||||| Sbjct: 920 tcagaggagaagaaagaaga 939
>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence Length = 166568 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 115476 agaggagaagaaagaagagg 115495
>ref|XM_416801.1| PREDICTED: Gallus gallus phosphate regulating neutral endopeptidase (LOC395777), mRNA Length = 1617 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ttcaagaagacaagaaagag 143 |||||||||||||||||||| Sbjct: 1205 ttcaagaagacaagaaagag 1224 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ttcaagaagacaagaaagag 77 |||||||||||||||||||| Sbjct: 1205 ttcaagaagacaagaaagag 1224 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ttcaagaagacaagaaagag 110 |||||||||||||||||||| Sbjct: 1205 ttcaagaagacaagaaagag 1224
>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence Length = 203437 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagaggcaga 562 ||||||| |||||||||||||||| Sbjct: 163970 agaggaggagaaagaagaggcaga 163947
>ref|NM_013665.1| Mus musculus short stature homeobox 2 (Shox2), mRNA Length = 1603 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 53 agaggagaagaaagaagagg 34
>ref|NM_031405.1| Mus musculus arsenate resistance protein 2 (Ars2), mRNA Length = 2628 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gaggagaagaaagaagaggc 559 |||||||||||||||||||| Sbjct: 1003 gaggagaagaaagaagaggc 1022
>ref|XM_717243.1| Candida albicans SC5314 hypothetical protein (CaO19_12486), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 aagaagagaagaaagaggccgaca 51 |||||||||||||||||| ||||| Sbjct: 1283 aagaagagaagaaagaggacgaca 1306
>ref|XM_717129.1| Candida albicans SC5314 hypothetical protein (CaO19_5019), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 aagaagagaagaaagaggccgaca 51 |||||||||||||||||| ||||| Sbjct: 1283 aagaagagaagaaagaggacgaca 1306
>gb|AC154398.6| Mus musculus chromosome 1, clone RP24-372I12, complete sequence Length = 178664 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 74263 agaggagaagaaagaagagg 74282 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 74236 agaggagaagaaagaagagg 74255
>gb|BC067558.1| Danio rerio cDNA clone MGC:85649 IMAGE:6805750, complete cds Length = 2429 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 536 ttcagaggagaagaaagaagaggc 559 ||||||||| |||||||||||||| Sbjct: 630 ttcagaggacaagaaagaagaggc 653
>gb|BC066831.1| Mus musculus arsenate resistance protein 2, mRNA (cDNA clone MGC:76605 IMAGE:30471339), complete cds Length = 2990 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gaggagaagaaagaagaggc 559 |||||||||||||||||||| Sbjct: 1231 gaggagaagaaagaagaggc 1250
>gb|AC124374.5| Mus musculus BAC clone RP24-567K8 from chromosome 5, complete sequence Length = 181395 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagaggcaga 562 ||||||| |||||||||||||||| Sbjct: 23275 agaggaggagaaagaagaggcaga 23298
>gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosome 10, complete sequence Length = 174497 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 112933 agaggagaagaaagaagagg 112952
>gb|AC123836.4| Mus musculus BAC clone RP23-367G3 from chromosome 15, complete sequence Length = 179575 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 86424 agaggagaagaaagaagagg 86443
>emb|BX936293.11| Platypus DNA sequence from clone XX-516O5, complete sequence Length = 178175 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 19388 cagaggagaagaaagaagag 19369
>emb|CR708658.2|CNS0G9R2 Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR719420.2|CNS0GI1U Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR719142.2|CNS0GHU4 Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 359 cagaggagaagaaagaagag 378
>emb|CR716150.2|CNS0GFJ6 Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR715867.2|CNS0GFBB Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 359 cagaggagaagaaagaagag 378
>emb|CR715433.2|CNS0GEZ9 Tetraodon nigroviridis full-length cDNA Length = 414 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 236 cagaggagaagaaagaagag 255
>emb|CR714475.2|CNS0GE8N Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 359 cagaggagaagaaagaagag 378
>emb|CR714006.2|CNS0GDVM Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR710770.2|CNS0GBDQ Tetraodon nigroviridis full-length cDNA Length = 549 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 371 cagaggagaagaaagaagag 390
>emb|CR710514.2|CNS0GB6M Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR710325.2|CNS0GB1D Tetraodon nigroviridis full-length cDNA Length = 539 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 361 cagaggagaagaaagaagag 380
>emb|CR705895.2|CNS0G7MB Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 359 cagaggagaagaaagaagag 378
>emb|CR706408.2|CNS0G80K Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 359 cagaggagaagaaagaagag 378
>emb|CR704833.2|CNS0G6ST Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR701447.2|CNS0G46R Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>gb|AC160958.2| Mus musculus BAC clone RP24-224I13 from chromosome 13, complete sequence Length = 178784 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 gagaagaaagaagaggcaga 562 |||||||||||||||||||| Sbjct: 175297 gagaagaaagaagaggcaga 175316
>emb|CR388061.11| Zebrafish DNA sequence from clone DKEY-69P22 in linkage group 5, complete sequence Length = 122069 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 536 ttcagaggagaagaaagaagaggc 559 ||||||||| |||||||||||||| Sbjct: 105584 ttcagaggacaagaaagaagaggc 105561
>emb|Z93021.2|HS516C23 Human DNA sequence from clone RP3-516C23 on chromosome 6q12 Contains the 5' end of the KHDRBS2 gene for KH domain containing RNA binding signal transduction associated protein 2, complete sequence Length = 116685 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 agaagaaagaagaggcagat 563 |||||||||||||||||||| Sbjct: 23177 agaagaaagaagaggcagat 23158
>emb|AL391005.9| Human DNA sequence from clone RP11-288A5 on chromosome 10 Contains a forkhead box I1 (FOXI1) pseudogene and a CpG island, complete sequence Length = 163778 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 actgttgttcaagaagagaa 37 |||||||||||||||||||| Sbjct: 109000 actgttgttcaagaagagaa 108981
>emb|AL390211.1| Human DNA sequence from clone RP1-29M10 on chromosome 20 Contains part of the EYA2 gene for eyes absent (Drosophila) homolog 2, ESTs, STSs and GSSs, complete sequence Length = 34917 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 gtggggtttgagatgtctga 418 |||||||||||||||||||| Sbjct: 20913 gtggggtttgagatgtctga 20932
>emb|AL157364.15| Human DNA sequence from clone RP11-31H2 on chromosome 13 Contians the ATP12A gene for ATPase, H+/K+ transporting, nongastric, alpha polypeptide, a ribosomal protein L26 (RPL26) pseudogene and a CpG island, complete sequence Length = 91231 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gagaagaaagatgcccctat 184 |||||||||||||||||||| Sbjct: 37771 gagaagaaagatgcccctat 37790
>emb|AL080315.18|HSDJ6P5 Human DNA sequence from clone RP1-6P5 on chromosome 6 Contains a eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (EEF1D) pseudogene and a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 158980 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 agctgaatatgaagtaactg 471 |||||||||||||||||||| Sbjct: 88798 agctgaatatgaagtaactg 88817
>gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174974 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 gaggagaagaaagaagaggcagat 563 |||| ||||||||||||||||||| Sbjct: 3792 gaggggaagaaagaagaggcagat 3815
>emb|Z47378.1|OCNFPROTM O.cuniculus mRNA for neurofilament protein M Length = 2428 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagaggcaga 562 |||||||||| ||||||||||||| Sbjct: 818 agaggagaaggaagaagaggcaga 841
>ref|XM_775345.1| PREDICTED: Strongylocentrotus purpuratus similar to formin 2 (LOC574937), mRNA Length = 3582 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 857 agaggagaagaaagaagagg 876
>gb|AY113865.1| Arabidopsis thaliana putative cytosolic factor protein (At1g72150) mRNA, complete cds Length = 1753 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 419 cagaggagaagaaagaagag 438
>gb|AY045913.1| Arabidopsis thaliana putative cytosolic factor (At1g72150) mRNA, complete cds Length = 2024 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 466 cagaggagaagaaagaagag 485
>emb|AL833552.1|HSM804865 Homo sapiens genomic DNA; cDNA DKFZp686O083 (from clone DKFZp686O083) Length = 5404 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 gtggggtttgagatgtctga 418 |||||||||||||||||||| Sbjct: 1901 gtggggtttgagatgtctga 1920
>gb|AC161570.6| Mus musculus chromosome 5, clone RP23-36O9, complete sequence Length = 228402 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagaggcaga 562 ||||||| |||||||||||||||| Sbjct: 108400 agaggaggagaaagaagaggcaga 108377
>emb|BX548244.5| Zebrafish DNA sequence from clone CH211-220I15 in linkage group 20 Contains two genes for novel proteins similar to vertebrate pim oncogene family, the tcp10 gene for t-complex protein 10and the gene for a novel protein similar to human tubulin tyrosine ligase-like family member 2 (TTL2), complete sequence Length = 94110 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgaagatgaaggcaaggcgg 228 |||||||||||||||||||| Sbjct: 55741 tgaagatgaaggcaaggcgg 55722
>emb|AL928995.19| Zebrafish DNA sequence from clone CH211-215M21 in linkage group 20 Contains the gene for a novel protein similar to human tubulin tyrosine ligase-like family, member 2 (TTLL2), seven genes for novel proteins similar to vertebrate pim oncogene family, two genes for transposase, seven novel genes, the 5' end of a novel gene and a CpG island, complete sequence Length = 202735 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgaagatgaaggcaaggcgg 228 |||||||||||||||||||| Sbjct: 4294 tgaagatgaaggcaaggcgg 4313
>gb|AC156939.5| Mus musculus BAC clone RP23-136O24 from chromosome 12, complete sequence Length = 218561 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 137312 agaggagaagaaagaagagg 137293
>ref|NM_001002101.1| Danio rerio zgc:86895 (zgc:86895), mRNA Length = 930 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 514 agaggagaagaaagaagagg 533
>gb|AC034239.5| Homo sapiens chromosome 5 clone CTD-2325A5, complete sequence Length = 93381 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 aggagaagaaagaagaggca 560 |||||||||||||||||||| Sbjct: 45833 aggagaagaaagaagaggca 45814
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 atcttcagaggagaagaaagaaga 556 |||||||||||| ||||||||||| Sbjct: 4481319 atcttcagaggaaaagaaagaaga 4481342
>gb|AC010010.6| Drosophila melanogaster 3L BAC RP98-13F6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167977 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 gaagccagctgaatccgaag 390 |||||||||||||||||||| Sbjct: 5123 gaagccagctgaatccgaag 5104
>gb|AC010688.6| Drosophila melanogaster 3L BAC RP98-11G5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 201313 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ggcgagaaaagtgaaaacgg 499 |||||||||||||||||||| Sbjct: 49716 ggcgagaaaagtgaaaacgg 49697
>ref|NM_206224.1| Drosophila melanogaster Enhancer of bithorax CG32346-RC, transcript variant C (E(bx)), mRNA Length = 7830 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gaagccagctgaatccgaag 390 |||||||||||||||||||| Sbjct: 3752 gaagccagctgaatccgaag 3771
>gb|AC084365.16| Homo sapiens 12 BAC RP11-632B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188629 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 tcagaggagaagaaagaaga 556 |||||||||||||||||||| Sbjct: 166798 tcagaggagaagaaagaaga 166817
>ref|NM_167819.2| Drosophila melanogaster Enhancer of bithorax CG32346-RA, transcript variant A (E(bx)), mRNA Length = 8834 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gaagccagctgaatccgaag 390 |||||||||||||||||||| Sbjct: 3752 gaagccagctgaatccgaag 3771
>ref|NM_167817.2| Drosophila melanogaster Enhancer of bithorax CG32346-RB, transcript variant B (E(bx)), mRNA Length = 8774 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gaagccagctgaatccgaag 390 |||||||||||||||||||| Sbjct: 3752 gaagccagctgaatccgaag 3771
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 1374521 agaggagaagaaagaagagg 1374502 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 1374162 agaggagaagaaagaagagg 1374143
>dbj|AK144300.1| Mus musculus 13 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:G630012F19 product:Arsenite-resistance protein 2, full insert sequence Length = 2990 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gaggagaagaaagaagaggc 559 |||||||||||||||||||| Sbjct: 1263 gaggagaagaaagaagaggc 1282
>ref|XM_694421.1| PREDICTED: Danio rerio similar to Ran binding protein 1 (LOC573843), mRNA Length = 2514 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 536 ttcagaggagaagaaagaagaggc 559 ||||||||| |||||||||||||| Sbjct: 730 ttcagaggacaagaaagaagaggc 753
>gb|AC099762.1| Caenorhabditis briggsae cosmid CB021D15, complete sequence Length = 98394 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tgatgaagatgaaggcaagg 225 |||||||||||||||||||| Sbjct: 45247 tgatgaagatgaaggcaagg 45266
>gb|AY060558.1| Arabidopsis thaliana At1g72150/T9N14_1 mRNA sequence Length = 2049 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 516 cagaggagaagaaagaagag 535
>gb|AF417921.1|AF417921 Drosophila melanogaster nucleosome remodeling factor large subunit NURF301 (Nurf301) mRNA, complete cds Length = 8808 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gaagccagctgaatccgaag 390 |||||||||||||||||||| Sbjct: 3726 gaagccagctgaatccgaag 3745
>emb|AL773515.7| Mouse DNA sequence from clone RP23-391M19 on chromosome 4, complete sequence Length = 120211 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ctgaatctgatgtagctccc 248 |||||||||||||||||||| Sbjct: 3295 ctgaatctgatgtagctccc 3276
>gb|AY051776.1| Drosophila melanogaster LD30146 full length cDNA Length = 4072 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gaagccagctgaatccgaag 390 |||||||||||||||||||| Sbjct: 43 gaagccagctgaatccgaag 62
>gb|AC093121.1| Drosophila melanogaster 3L BAC RP98-11J11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168250 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gaagccagctgaatccgaag 390 |||||||||||||||||||| Sbjct: 66648 gaagccagctgaatccgaag 66667
>gb|AF364085.1|AF364085 Danio rerio Ran binding protein 1 mRNA, complete cds Length = 862 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 536 ttcagaggagaagaaagaagaggc 559 ||||||||| |||||||||||||| Sbjct: 665 ttcagaggacaagaaagaagaggc 688
>gb|AC158596.7| Mus musculus 10 BAC RP23-188F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207673 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 ccagcatcttcagaggagaa 547 |||||||||||||||||||| Sbjct: 10497 ccagcatcttcagaggagaa 10478
>gb|AF312033.1|AF312033 Mus musculus acetylcholinesterase (Ache) and D5Ertd655e genes, complete cds; ASR2 (Asr2) gene, complete cds, alternatively spliced; TRIP6 (Trip6), CIP1 (Cip1), EPHB4 (Ephb4), ZAN (Zan), EPO (Epo), RPP20 (Rpp20), PERQ1 (Perq1), GNB2 (Gnb2), and BAF53B (Baf53b) genes, complete cds; and TFR2 (Tfr2) gene, partial cds Length = 296820 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaggagaagaaagaagaggc 559 |||||||||||||||||||| Sbjct: 19059 gaggagaagaaagaagaggc 19040
>gb|AC152504.2| Pan troglodytes BAC clone RP43-147M24 from chromosome 7, complete sequence Length = 178619 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 agaagaaagaagaggcagat 563 |||||||||||||||||||| Sbjct: 58745 agaagaaagaagaggcagat 58764
>gb|AC067754.6|AC067754 Arabidopsis thaliana chromosome 1 BAC T9N14 genomic sequence, complete sequence Length = 98874 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 cagaggagaagaaagaagag 557 |||||||||||||||||||| Sbjct: 12921 cagaggagaagaaagaagag 12940
>gb|AC073942.2|F16L1 Sequence of BAC F16L1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 36030 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 tcagaggagaagaaagaaga 556 |||||||||||||||||||| Sbjct: 9504 tcagaggagaagaaagaaga 9485
>dbj|BS000162.1| Pan troglodytes chromosome 22 clone:PTB-060F12, map 22, complete sequences Length = 156288 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tatcagagaacaaggaaaac 293 |||||||||||||||||||| Sbjct: 143606 tatcagagaacaaggaaaac 143625 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tatcagagaacaaggaaaac 368 |||||||||||||||||||| Sbjct: 143606 tatcagagaacaaggaaaac 143625
>gb|AY929853.1| Danio rerio troponin 1 mRNA, complete cds Length = 754 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 513 agaggagaagaaagaagagg 532
>gb|AC002462.1|AC002462 Human BAC clone CTA-210I4, complete sequence Length = 100258 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 tcagaggagaagaaagaaga 556 |||||||||||||||||||| Sbjct: 69848 tcagaggagaagaaagaaga 69867
>emb|AJ339508.1|HSA339508 Homo sapiens genomic sequence surrounding NotI site, clone NL1-ZE20R Length = 800 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gaagagaagaaagaggccga 49 |||||||||||||||||||| Sbjct: 478 gaagagaagaaagaggccga 459
>gb|BC071518.1| Danio rerio zgc:86895, mRNA (cDNA clone MGC:86895 IMAGE:6904872), complete cds Length = 930 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 514 agaggagaagaaagaagagg 533
>emb|CR354391.7| Zebrafish DNA sequence from clone CH211-256L9 in linkage group 20, complete sequence Length = 92464 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgaagatgaaggcaaggcgg 228 |||||||||||||||||||| Sbjct: 88090 tgaagatgaaggcaaggcgg 88071
>emb|AL954228.1|CH179K04 Pan troglodytes chromosome 22 BAC CH251-179K04, complete sequence Length = 182532 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tatcagagaacaaggaaaac 293 |||||||||||||||||||| Sbjct: 161520 tatcagagaacaaggaaaac 161539 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tatcagagaacaaggaaaac 368 |||||||||||||||||||| Sbjct: 161520 tatcagagaacaaggaaaac 161539
>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete sequence Length = 281100 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ggcgagaaaagtgaaaacgg 499 |||||||||||||||||||| Sbjct: 53589 ggcgagaaaagtgaaaacgg 53570
>gb|AE003467.4| Drosophila melanogaster chromosome 3L, section 1 of 83 of the complete sequence Length = 303512 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 gaagccagctgaatccgaag 390 |||||||||||||||||||| Sbjct: 226171 gaagccagctgaatccgaag 226152
>gb|AC123709.9| Mus musculus chromosome 13, clone RP23-375O18, complete sequence Length = 99670 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gagaagaaagaagaggcaga 562 |||||||||||||||||||| Sbjct: 97273 gagaagaaagaagaggcaga 97254
>dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-816H13, complete sequence Length = 227942 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 caagaagacaagaaagaggc 112 |||||||||||||||||||| Sbjct: 122594 caagaagacaagaaagaggc 122575 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 caagaagacaagaaagaggc 145 |||||||||||||||||||| Sbjct: 122594 caagaagacaagaaagaggc 122575 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 caagaagacaagaaagaggc 79 |||||||||||||||||||| Sbjct: 122594 caagaagacaagaaagaggc 122575
>gb|U66918.1|MMU66918 Mus musculus OG-12a homeodomain protein (OG-12) mRNA, complete cds Length = 1603 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 53 agaggagaagaaagaagagg 34
>gb|AC163645.5| Mus musculus BAC clone RP23-206F16 from chromosome 10, complete sequence Length = 212773 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 8601 agaggagaagaaagaagagg 8620
>gb|AC144921.12| Mus musculus chromosome 1, clone RP24-214P19, complete sequence Length = 188960 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 164176 agaggagaagaaagaagagg 164195 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 164149 agaggagaagaaagaagagg 164168
>gb|AC150682.2| Mus musculus BAC clone RP24-210N1 from 5, complete sequence Length = 164951 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaggagaagaaagaagaggc 559 |||||||||||||||||||| Sbjct: 27715 gaggagaagaaagaagaggc 27696
>gb|AC002350.1|AC002350 Homo sapiens 12q24 PAC RPCI3-424M6 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 167217 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 gaggagaagaaagaagaggcagat 563 |||| ||||||||||||||||||| Sbjct: 163886 gaggggaagaaagaagaggcagat 163909
>gb|AC122870.4| Mus musculus BAC clone RP23-103D17 from 3, complete sequence Length = 181063 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 85765 agaggagaagaaagaagagg 85746
>emb|AL808026.10| Mouse DNA sequence from clone RP23-200N16 on chromosome X, complete sequence Length = 214016 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 94727 agaggagaagaaagaagagg 94746
>emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chromosome 16, complete sequence Length = 243114 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 191382 agaggagaagaaagaagagg 191363
>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154271 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ccagcatcttcagaggagaa 547 |||||||||||||||||||| Sbjct: 91202 ccagcatcttcagaggagaa 91221
>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete sequence Length = 204206 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 cttcagaggagaagaaagaa 554 |||||||||||||||||||| Sbjct: 115243 cttcagaggagaagaaagaa 115224
>emb|AL844594.4| Mouse DNA sequence from clone RP23-260P5 on chromosome X, complete sequence Length = 82772 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 agaggagaagaaagaagagg 558 |||||||||||||||||||| Sbjct: 5279 agaggagaagaaagaagagg 5260 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,645,876 Number of Sequences: 3902068 Number of extensions: 7645876 Number of successful extensions: 186157 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 185737 Number of HSP's gapped (non-prelim): 420 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
