ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart11g12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550207.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1750 Score = 319 bits (161), Expect = 5e-84 Identities = 309/357 (86%), Gaps = 6/357 (1%) Strand = Plus / Plus Query: 183 ggcggcggccgaccgcatcacgcgcctgccgggccagccgccggtcaacttctccatgta 242 |||||| || ||||| |||||| ||||||||| ||||| | |||||||||||||||||| Sbjct: 186 ggcggccgcggaccgaatcacggccctgccggggcagccacgggtcaacttctccatgta 245 Query: 243 ctcgggctacgtcaccgtcgacgcccccgcgggccgcgccctcttctactggctcgtcga 302 ||| || ||||||||||||||||| |||| || ||||| ||||||||||||||| |||| Sbjct: 246 ctccgggtacgtcaccgtcgacgcggccgccgggcgcgcgctcttctactggctcatcga 305 Query: 303 ggtcgccgtcgcgaagcccaagtccgccccgctcgtgctctggctcaacggcgggcccgg 362 || ||||| | || || |||||| |||||||||||||||||||||||||||||||| Sbjct: 306 ggccgccgacccg--gc----gtccgcgccgctcgtgctctggctcaacggcgggcccgg 359 Query: 363 ctgctcctccgtcggctacggcgcctccgaggagctcggcgccttccggatcaacgccga 422 ||||||||||| || |||||||| ||||||||||||||||| |||||||||||| |||| Sbjct: 360 gtgctcctccgttgggtacggcgcgtccgaggagctcggcgcgttccggatcaaccccga 419 Query: 423 cggcaggacgctctccaccaacccctactcctggaacaaaatggcgaacgtgctgttcct 482 ||| ||| |||||| | ||||||||| ||||||||| | |||| ||| |||||||| | Sbjct: 420 cgggaggtcgctctacttgaacccctacccctggaacagagtggccaacatgctgttctt 479 Query: 483 ggacgcccccgccggcgtcgggtactcctactccaacaccagctccgatctgctcac 539 |||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||| Sbjct: 480 ggactcccccgccggcgtcggctactcctactccaacaccacctccgatctgttcac 536 Score = 40.1 bits (20), Expect = 7.4 Identities = 60/72 (83%), Gaps = 6/72 (8%) Strand = Plus / Plus Query: 100 gcgccaatggcggtg---gccgtgctgctggccgccatc---ctggcgctgtgcccgctc 153 ||||||||||||| | |||||||| |||||||||||| |||||||||| ||| ||| Sbjct: 73 gcgccaatggcggcggccgccgtgctcctggccgccatcctactggcgctgtcccctctc 132 Query: 154 cccctttccctc 165 ||| | |||||| Sbjct: 133 cccatgtccctc 144
>dbj|AK071183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P08, full insert sequence Length = 1750 Score = 319 bits (161), Expect = 5e-84 Identities = 309/357 (86%), Gaps = 6/357 (1%) Strand = Plus / Plus Query: 183 ggcggcggccgaccgcatcacgcgcctgccgggccagccgccggtcaacttctccatgta 242 |||||| || ||||| |||||| ||||||||| ||||| | |||||||||||||||||| Sbjct: 186 ggcggccgcggaccgaatcacggccctgccggggcagccacgggtcaacttctccatgta 245 Query: 243 ctcgggctacgtcaccgtcgacgcccccgcgggccgcgccctcttctactggctcgtcga 302 ||| || ||||||||||||||||| |||| || ||||| ||||||||||||||| |||| Sbjct: 246 ctccgggtacgtcaccgtcgacgcggccgccgggcgcgcgctcttctactggctcatcga 305 Query: 303 ggtcgccgtcgcgaagcccaagtccgccccgctcgtgctctggctcaacggcgggcccgg 362 || ||||| | || || |||||| |||||||||||||||||||||||||||||||| Sbjct: 306 ggccgccgacccg--gc----gtccgcgccgctcgtgctctggctcaacggcgggcccgg 359 Query: 363 ctgctcctccgtcggctacggcgcctccgaggagctcggcgccttccggatcaacgccga 422 ||||||||||| || |||||||| ||||||||||||||||| |||||||||||| |||| Sbjct: 360 gtgctcctccgttgggtacggcgcgtccgaggagctcggcgcgttccggatcaaccccga 419 Query: 423 cggcaggacgctctccaccaacccctactcctggaacaaaatggcgaacgtgctgttcct 482 ||| ||| |||||| | ||||||||| ||||||||| | |||| ||| |||||||| | Sbjct: 420 cgggaggtcgctctacttgaacccctacccctggaacagagtggccaacatgctgttctt 479 Query: 483 ggacgcccccgccggcgtcgggtactcctactccaacaccagctccgatctgctcac 539 |||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||| Sbjct: 480 ggactcccccgccggcgtcggctactcctactccaacaccacctccgatctgttcac 536 Score = 40.1 bits (20), Expect = 7.4 Identities = 60/72 (83%), Gaps = 6/72 (8%) Strand = Plus / Plus Query: 100 gcgccaatggcggtg---gccgtgctgctggccgccatc---ctggcgctgtgcccgctc 153 ||||||||||||| | |||||||| |||||||||||| |||||||||| ||| ||| Sbjct: 73 gcgccaatggcggcggccgccgtgctcctggccgccatcctactggcgctgtcccctctc 132 Query: 154 cccctttccctc 165 ||| | |||||| Sbjct: 133 cccatgtccctc 144
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 234 bits (118), Expect = 2e-58 Identities = 239/278 (85%), Gaps = 6/278 (2%) Strand = Plus / Plus Query: 183 ggcggcggccgaccgcatcacgcgcctgccgggccagccgccggtcaacttctccatgta 242 |||||| || ||||| |||||| ||||||||| ||||| | |||||||||||||||||| Sbjct: 3053665 ggcggccgcggaccgaatcacggccctgccggggcagccacgggtcaacttctccatgta 3053724 Query: 243 ctcgggctacgtcaccgtcgacgcccccgcgggccgcgccctcttctactggctcgtcga 302 ||| || ||||||||||||||||| |||| || ||||| ||||||||||||||| |||| Sbjct: 3053725 ctccgggtacgtcaccgtcgacgcggccgccgggcgcgcgctcttctactggctcatcga 3053784 Query: 303 ggtcgccgtcgcgaagcccaagtccgccccgctcgtgctctggctcaacggcgggcccgg 362 || ||||| | || || |||||| |||||||||||||||||||||||||||||||| Sbjct: 3053785 ggccgccgacccg--gc----gtccgcgccgctcgtgctctggctcaacggcgggcccgg 3053838 Query: 363 ctgctcctccgtcggctacggcgcctccgaggagctcggcgccttccggatcaacgccga 422 ||||||||||| || |||||||| ||||||||||||||||| |||||||||||| |||| Sbjct: 3053839 gtgctcctccgttgggtacggcgcgtccgaggagctcggcgcgttccggatcaaccccga 3053898 Query: 423 cggcaggacgctctccaccaacccctactcctggaaca 460 ||| ||| |||||| | ||||||||| ||||||||| Sbjct: 3053899 cgggaggtcgctctacttgaacccctacccctggaaca 3053936 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 464 tggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcctactccaacacca 523 |||| ||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 3054028 tggccaacatgctgttcttggactcccccgccggcgtcggctactcctactccaacacca 3054087 Query: 524 gctccgatctgctcac 539 |||||||||| |||| Sbjct: 3054088 cctccgatctgttcac 3054103 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 |||||||| || ||||||||||||||||| || ||||| || ||||| |||||||| || Sbjct: 35684078 ccgctcgtcctgtggctcaacggcgggccggggtgctcgtcggtcgggtacggcgcgtcg 35684019 Query: 391 gaggagctcggcgccttccggatca 415 |||||| ||||| | |||||||||| Sbjct: 35684018 gaggaggtcggcccgttccggatca 35683994 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ctgcggcggcggcggccgac 195 |||||||||||||||||||| Sbjct: 12741617 ctgcggcggcggcggccgac 12741636 Score = 40.1 bits (20), Expect = 7.4 Identities = 60/72 (83%), Gaps = 6/72 (8%) Strand = Plus / Plus Query: 100 gcgccaatggcggtg---gccgtgctgctggccgccatc---ctggcgctgtgcccgctc 153 ||||||||||||| | |||||||| |||||||||||| |||||||||| ||| ||| Sbjct: 3053552 gcgccaatggcggcggccgccgtgctcctggccgccatcctactggcgctgtcccctctc 3053611 Query: 154 cccctttccctc 165 ||| | |||||| Sbjct: 3053612 cccatgtccctc 3053623
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 234 bits (118), Expect = 2e-58 Identities = 239/278 (85%), Gaps = 6/278 (2%) Strand = Plus / Plus Query: 183 ggcggcggccgaccgcatcacgcgcctgccgggccagccgccggtcaacttctccatgta 242 |||||| || ||||| |||||| ||||||||| ||||| | |||||||||||||||||| Sbjct: 135182 ggcggccgcggaccgaatcacggccctgccggggcagccacgggtcaacttctccatgta 135241 Query: 243 ctcgggctacgtcaccgtcgacgcccccgcgggccgcgccctcttctactggctcgtcga 302 ||| || ||||||||||||||||| |||| || ||||| ||||||||||||||| |||| Sbjct: 135242 ctccgggtacgtcaccgtcgacgcggccgccgggcgcgcgctcttctactggctcatcga 135301 Query: 303 ggtcgccgtcgcgaagcccaagtccgccccgctcgtgctctggctcaacggcgggcccgg 362 || ||||| | || || |||||| |||||||||||||||||||||||||||||||| Sbjct: 135302 ggccgccgacccg--gc----gtccgcgccgctcgtgctctggctcaacggcgggcccgg 135355 Query: 363 ctgctcctccgtcggctacggcgcctccgaggagctcggcgccttccggatcaacgccga 422 ||||||||||| || |||||||| ||||||||||||||||| |||||||||||| |||| Sbjct: 135356 gtgctcctccgttgggtacggcgcgtccgaggagctcggcgcgttccggatcaaccccga 135415 Query: 423 cggcaggacgctctccaccaacccctactcctggaaca 460 ||| ||| |||||| | ||||||||| ||||||||| Sbjct: 135416 cgggaggtcgctctacttgaacccctacccctggaaca 135453 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 464 tggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcctactccaacacca 523 |||| ||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 135545 tggccaacatgctgttcttggactcccccgccggcgtcggctactcctactccaacacca 135604 Query: 524 gctccgatctgctcac 539 |||||||||| |||| Sbjct: 135605 cctccgatctgttcac 135620 Score = 40.1 bits (20), Expect = 7.4 Identities = 60/72 (83%), Gaps = 6/72 (8%) Strand = Plus / Plus Query: 100 gcgccaatggcggtg---gccgtgctgctggccgccatc---ctggcgctgtgcccgctc 153 ||||||||||||| | |||||||| |||||||||||| |||||||||| ||| ||| Sbjct: 135069 gcgccaatggcggcggccgccgtgctcctggccgccatcctactggcgctgtcccctctc 135128 Query: 154 cccctttccctc 165 ||| | |||||| Sbjct: 135129 cccatgtccctc 135140
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 234 bits (118), Expect = 2e-58 Identities = 239/278 (85%), Gaps = 6/278 (2%) Strand = Plus / Plus Query: 183 ggcggcggccgaccgcatcacgcgcctgccgggccagccgccggtcaacttctccatgta 242 |||||| || ||||| |||||| ||||||||| ||||| | |||||||||||||||||| Sbjct: 21705 ggcggccgcggaccgaatcacggccctgccggggcagccacgggtcaacttctccatgta 21764 Query: 243 ctcgggctacgtcaccgtcgacgcccccgcgggccgcgccctcttctactggctcgtcga 302 ||| || ||||||||||||||||| |||| || ||||| ||||||||||||||| |||| Sbjct: 21765 ctccgggtacgtcaccgtcgacgcggccgccgggcgcgcgctcttctactggctcatcga 21824 Query: 303 ggtcgccgtcgcgaagcccaagtccgccccgctcgtgctctggctcaacggcgggcccgg 362 || ||||| | || || |||||| |||||||||||||||||||||||||||||||| Sbjct: 21825 ggccgccgacccg--gc----gtccgcgccgctcgtgctctggctcaacggcgggcccgg 21878 Query: 363 ctgctcctccgtcggctacggcgcctccgaggagctcggcgccttccggatcaacgccga 422 ||||||||||| || |||||||| ||||||||||||||||| |||||||||||| |||| Sbjct: 21879 gtgctcctccgttgggtacggcgcgtccgaggagctcggcgcgttccggatcaaccccga 21938 Query: 423 cggcaggacgctctccaccaacccctactcctggaaca 460 ||| ||| |||||| | ||||||||| ||||||||| Sbjct: 21939 cgggaggtcgctctacttgaacccctacccctggaaca 21976 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 464 tggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcctactccaacacca 523 |||| ||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 22068 tggccaacatgctgttcttggactcccccgccggcgtcggctactcctactccaacacca 22127 Query: 524 gctccgatctgctcac 539 |||||||||| |||| Sbjct: 22128 cctccgatctgttcac 22143 Score = 40.1 bits (20), Expect = 7.4 Identities = 60/72 (83%), Gaps = 6/72 (8%) Strand = Plus / Plus Query: 100 gcgccaatggcggtg---gccgtgctgctggccgccatc---ctggcgctgtgcccgctc 153 ||||||||||||| | |||||||| |||||||||||| |||||||||| ||| ||| Sbjct: 21592 gcgccaatggcggcggccgccgtgctcctggccgccatcctactggcgctgtcccctctc 21651 Query: 154 cccctttccctc 165 ||| | |||||| Sbjct: 21652 cccatgtccctc 21663
>dbj|AK107270.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-H11, full insert sequence Length = 1608 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| || Sbjct: 319 ccgctcgtgctgtggctgaacggcgggcccggctgctcctccgtcgcgtacggcgcgtcg 378 Query: 391 gaggagctcggcgccttccggatcaacgccgacggcaggacgctctccaccaacccctac 450 |||||||||||||||||||| ||| | |||||||| || |||| | |||| |||| Sbjct: 379 gaggagctcggcgccttccgcatccgccccgacggcgccaccctcttcctcaacgactac 438 Query: 451 tcctggaacaaaatggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcc 510 ||||||||| |||||||| | ||||| ||||| | || ||||||||||| | ||| Sbjct: 439 cggtggaacaaagtggcgaacatcttgttcttggactcgccggccggcgtcggattctca 498 Query: 511 tactccaacaccagctccga 530 ||| ||||||||| |||||| Sbjct: 499 tacaccaacaccacctccga 518 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 208 ctgccgggccagccgccggtcaacttctccatgtactcgggctacgtcac 257 ||||| || ||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 199 ctgcccgggcagccgccggtggacttcgacatgtactccggctacgtcac 248
>dbj|AK107218.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-C12, full insert sequence Length = 1561 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| || Sbjct: 316 ccgctcgtgctgtggctgaacggcgggcccggctgctcctccgtcgcgtacggcgcgtcg 375 Query: 391 gaggagctcggcgccttccggatcaacgccgacggcaggacgctctccaccaacccctac 450 |||||||||||||||||||| ||| | |||||||| || |||| | |||| |||| Sbjct: 376 gaggagctcggcgccttccgcatccgccccgacggcgccaccctcttcctcaacgactac 435 Query: 451 tcctggaacaaaatggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcc 510 ||||||||| |||||||| | ||||| ||||| | || ||||||||||| | ||| Sbjct: 436 cggtggaacaaagtggcgaacatcttgttcttggactcgccggccggcgtcggattctca 495 Query: 511 tactccaacaccagctccga 530 ||| ||||||||| |||||| Sbjct: 496 tacaccaacaccacctccga 515 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 208 ctgccgggccagccgccggtcaacttctccatgtactcgggctacgtcac 257 ||||| || ||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 196 ctgcccgggcagccgccggtggacttcgacatgtactccggctacgtcac 245
>dbj|AK064671.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-E03, full insert sequence Length = 1744 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| || Sbjct: 318 ccgctcgtgctgtggctgaacggcgggcccggctgctcctccgtcgcgtacggcgcgtcg 377 Query: 391 gaggagctcggcgccttccggatcaacgccgacggcaggacgctctccaccaacccctac 450 |||||||||||||||||||| ||| | |||||||| || |||| | |||| |||| Sbjct: 378 gaggagctcggcgccttccgcatccgccccgacggcgccaccctcttcctcaacgactac 437 Query: 451 tcctggaacaaaatggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcc 510 ||||||||| |||||||| | ||||| ||||| | || ||||||||||| | ||| Sbjct: 438 cggtggaacaaagtggcgaacatcttgttcttggactcgccggccggcgtcggattctca 497 Query: 511 tactccaacaccagctccga 530 ||| ||||||||| |||||| Sbjct: 498 tacaccaacaccacctccga 517 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 208 ctgccgggccagccgccggtcaacttctccatgtactcgggctacgtcac 257 ||||| || ||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 198 ctgcccgggcagccgccggtggacttcgacatgtactccggctacgtcac 247
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| || Sbjct: 74591 ccgctcgtgctgtggctgaacggcgggcccggctgctcctccgtcgcgtacggcgcgtcg 74532 Query: 391 gaggagctcggcgccttccg 410 |||||||||||||||||||| Sbjct: 74531 gaggagctcggcgccttccg 74512 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Minus Query: 208 ctgccgggccagccgccggtcaacttctccatgtactcgggctacgtcac 257 ||||| || ||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 74711 ctgcccgggcagccgccggtggacttcgacatgtactccggctacgtcac 74662
>emb|Y09602.1|HVCPMII H.vulgare gene encoding serine carboxypeptidase II, CP-MII Length = 6225 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| || Sbjct: 2540 ccgctcgtgctgtggctcaacggcggccccggctgctcctccgtcgcctacggcgcgtcg 2599 Query: 391 gaggagctcggcgccttccg 410 |||||||||||||| ||||| Sbjct: 2600 gaggagctcggcgcgttccg 2619 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 464 tggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcctactccaacacca 523 |||| ||||||||||||||||| | || |||||||| |||| ||||||| ||||||||| Sbjct: 2762 tggccaacgtgctgttcctggattcgccggccggcgtggggttctcctacaccaacacca 2821 Query: 524 gctccga 530 ||||||| Sbjct: 2822 gctccga 2828
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| || Sbjct: 10689991 ccgctcgtgctgtggctgaacggcgggcccggctgctcctccgtcgcgtacggcgcgtcg 10689932 Query: 391 gaggagctcggcgccttccg 410 |||||||||||||||||||| Sbjct: 10689931 gaggagctcggcgccttccg 10689912 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Minus Query: 208 ctgccgggccagccgccggtcaacttctccatgtactcgggctacgtcac 257 ||||| || ||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 10690111 ctgcccgggcagccgccggtggacttcgacatgtactccggctacgtcac 10690062
>dbj|AK119979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-F05, full insert sequence Length = 730 Score = 111 bits (56), Expect = 2e-21 Identities = 164/200 (82%) Strand = Plus / Plus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| || Sbjct: 316 ccgctcgtgctgtggctgaacggcgggcccggctgctcctccgtcgcgtacggcgcgtcg 375 Query: 391 gaggagctcggcgccttccggatcaacgccgacggcaggacgctctccaccaacccctac 450 |||||||||||||| ||||| ||| | |||||||| || |||| | |||| |||| Sbjct: 376 gaggagctcggcgctttccgcatccgccccgacggcgccaccctcttcctcaacgactac 435 Query: 451 tcctggaacaaaatggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcc 510 ||||||||| |||||||| | ||||| ||||| | || ||||||||||| | ||| Sbjct: 436 cggtggaacaaagtggcgaacatcttgttcttggactcgccggccggcgtcggattctca 495 Query: 511 tactccaacaccagctccga 530 ||| ||||||||| |||||| Sbjct: 496 tacaccaacaccacctccga 515 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 208 ctgccgggccagccgccggtcaacttctccatgtactcgggctacgtcac 257 ||||| || ||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 196 ctgcccgggcagccgccggtggacttcgacatgtactccggctacgtcac 245
>ref|NM_185973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 340 ctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctccgaggagctc 399 ||||||||||||||||| ||||||||||| || |||| ||||||||| ||||||||| Sbjct: 406 ctctggctcaacggcggccccggctgctcgtcgctcgggtacggcgccatggaggagctc 465 Query: 400 ggcgccttccggatcaacgccgacggcaggacgctctccaccaacccctactcctggaac 459 ||| | ||||| |||| ||||||| | |||||| | ||| ||||||||||||||| Sbjct: 466 ggcccgttccgcgtcaagagcgacggcgtgtcgctctaccgcaatccctactcctggaac 525 Query: 460 aaaatggcgaacgtgctgttcctgga 485 || ||||||||||| |||||||||| Sbjct: 526 aacgtggcgaacgtgatgttcctgga 551
>gb|AY224473.1| Oryza sativa (japonica cultivar-group) isolate 29039 serine carboxypepsidase mRNA, partial cds Length = 1338 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 340 ctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctccgaggagctc 399 |||||||| |||||||| ||||||||||| || |||| ||||||||| ||||||||| Sbjct: 169 ctctggctaaacggcggccccggctgctcgtcgctcgggtacggcgccatggaggagctc 228 Query: 400 ggcgccttccggatcaacgccgacggcaggacgctctccaccaacccctactcctggaac 459 ||| | ||||| |||| ||||||| | |||||| | ||| ||||||||||||||| Sbjct: 229 ggcccgttccgcgtcaagagcgacggcgtgtcgctctaccgcaatccctactcctggaac 288 Query: 460 aaaatggcgaacgtgctgttcctgga 485 || ||||||||||| |||||||||| Sbjct: 289 aacgtggcgaacgtgatgttcctgga 314
>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster Length = 162249 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 326 ccgccccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcg 385 |||| |||||| | |||||||||||||||||||| || ||||||||| ||||| ||||| Sbjct: 110825 ccgcgccgctcctcctctggctcaacggcgggcctgggtgctcctccatcggcggcggcg 110766 Query: 386 cctccgaggagctcggcgccttccg 410 | ||||||||||||||||||||| Sbjct: 110765 cgctcgaggagctcggcgccttccg 110741 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 326 ccgccccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcg 385 |||| |||||| | ||||||||||||||| |||| || ||||||||||||||||| || | Sbjct: 82160 ccgcgccgctcctcctctggctcaacggccggcctgggtgctcctccgtcggctatggtg 82101 Query: 386 cctccgaggagctcggcgccttccg 410 || |||||||||||||| ||||| Sbjct: 82100 ccatggaggagctcggcgcgttccg 82076 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 |||||||| ||||||||||| ||||| || || ||||||||| | ||| |||||| | Sbjct: 94885 ccgctcgtcctctggctcaatggcggtcctgggtgctcctccattggcggcggcgcgctc 94826 Query: 391 gaggagctcggcgccttccg 410 |||||||||||||||||||| Sbjct: 94825 gaggagctcggcgccttccg 94806 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 465 ggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcctactccaacaccag 524 |||||||||||||||| |||| | || |||||||| |||| ||| ||| ||||||||| Sbjct: 110367 ggcgaacgtgctgttcttggagtcgccggccggcgtggggttctcttacagcaacaccag 110308 Query: 525 ctccgatct 533 ||||||||| Sbjct: 110307 ctccgatct 110299 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 464 tggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcctactccaacacca 523 ||||||||||||||||| ||||||| || ||||| | |||| ||| ||| ||| |||| Sbjct: 81762 tggcgaacgtgctgttcttggacgcgccggccggtgcagggttctcttacagcaatacca 81703 Query: 524 gctccga 530 ||||||| Sbjct: 81702 gctccga 81696 Score = 44.1 bits (22), Expect = 0.47 Identities = 55/66 (83%) Strand = Plus / Minus Query: 465 ggcgaacgtgctgttcctggacgcccccgccggcgtcgggtactcctactccaacaccag 524 ||||||||| |||||| |||| | || |||||||| |||| ||| ||| ||||||||| Sbjct: 94672 ggcgaacgtactgttcttggagtcgccggccggcgtggggttctcttacagcaacaccag 94613 Query: 525 ctccga 530 |||||| Sbjct: 94612 ctccga 94607 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 247 ggctacgtcaccgtcgacgcccccgcgggccgcgccctcttctactgg 294 |||||| |||||||||||| | || |||||||| |||||||||||| Sbjct: 94981 ggctacatcaccgtcgacgagcaagctggccgcgcgctcttctactgg 94934
>emb|X78877.1|HVACXPII3 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-3 Length = 1979 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 343 tggctcaacggcgggcccggctgctcctccgtcggctacggcgcctccgaggagctcggc 402 ||||||||||| || ||||| ||||| || | || ||||||||| |||||||||||| Sbjct: 490 tggctcaacggtggccccgggtgctcgtcgctggggtacggcgccatggaggagctcggc 549 Query: 403 gccttccggatcaacgccgacggcaggacgctctccaccaacccctactcctggaacaaa 462 | ||||| ||| |||||||| |||||||| || ||||||||||||||||||| | Sbjct: 550 ccgttccgcgtcatgagcgacggcaagacgctctacagcaacccctactcctggaaccac 609 Query: 463 atggcgaacgtgctgttcctgga 485 ||||||||||||||||||||| Sbjct: 610 gcggcgaacgtgctgttcctgga 632
>ref|NM_190464.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2010 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 |||||||| || ||||||||||||||||| || ||||| || ||||| |||||||| || Sbjct: 868 ccgctcgtcctgtggctcaacggcgggccggggtgctcgtcggtcgggtacggcgcgtcg 927 Query: 391 gaggagctcggcgccttccggatca 415 |||||| ||||| | |||||||||| Sbjct: 928 gaggaggtcggcccgttccggatca 952
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 |||||||| || ||||||||||||||||| || ||||| || ||||| |||||||| || Sbjct: 87415 ccgctcgtcctgtggctcaacggcgggccggggtgctcgtcggtcgggtacggcgcgtcg 87356 Query: 391 gaggagctcggcgccttccggatca 415 |||||| ||||| | |||||||||| Sbjct: 87355 gaggaggtcggcccgttccggatca 87331
>dbj|AK111479.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-B08, full insert sequence Length = 2075 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 316 aagcccaagtccgccccgctcgtgctctggctcaacggcgggcccggctgctcctcc 372 ||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 766 aagcccaagtccgaccccgtcgtcctctggctcaacggcggtcccggctgctcctcc 822
>dbj|AK073320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029C16, full insert sequence Length = 1997 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 |||||||| || ||||||||||||||||| || ||||| || ||||| |||||||| || Sbjct: 607 ccgctcgtcctgtggctcaacggcgggccggggtgctcgtcggtcgggtacggcgcgtcg 666 Query: 391 gaggagctcggcgccttccggatca 415 |||||| ||||| | |||||||||| Sbjct: 667 gaggaggtcggcccgttccggatca 691
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 340 ctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctccgaggagctc 399 ||||||||||||||||| ||||||||||| || |||| ||||||||| ||||||||| Sbjct: 27589747 ctctggctcaacggcggccccggctgctcgtcgctcgggtacggcgccatggaggagctc 27589688 Query: 400 ggcgccttccggatcaacgccgacggcaggacgctctccaccaacccctactcctggaac 459 ||| | ||||| |||| ||||||| | |||||| | ||| ||||||||||||||| Sbjct: 27589687 ggcccgttccgcgtcaagagcgacggcgtgtcgctctaccgcaatccctactcctggaac 27589628 Query: 460 aa 461 || Sbjct: 27589627 aa 27589626 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ggctcgtcgaggtcgccgtcg 313 ||||||||||||||||||||| Sbjct: 17980051 ggctcgtcgaggtcgccgtcg 17980031 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ggctcgtcgaggtcgccgtcg 313 ||||||||||||||||||||| Sbjct: 17920930 ggctcgtcgaggtcgccgtcg 17920910
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 340 ctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctccgaggagctc 399 ||||||||||||||||| ||||||||||| || |||| ||||||||| ||||||||| Sbjct: 46740 ctctggctcaacggcggccccggctgctcgtcgctcgggtacggcgccatggaggagctc 46681 Query: 400 ggcgccttccggatcaacgccgacggcaggacgctctccaccaacccctactcctggaac 459 ||| | ||||| |||| ||||||| | |||||| | ||| ||||||||||||||| Sbjct: 46680 ggcccgttccgcgtcaagagcgacggcgtgtcgctctaccgcaatccctactcctggaac 46621 Query: 460 aa 461 || Sbjct: 46620 aa 46619
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctccgag 393 ||||| |||||||||||||| || || || ||||||||| ||||||| |||||| |||| Sbjct: 30593624 ctcgtcctctggctcaacggaggccctggttgctcctccctcggctatggcgccctcgag 30593683 Query: 394 gagctcggc 402 ||||||||| Sbjct: 30593684 gagctcggc 30593692 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 473 tgctgttcctggacgcccccgccggcgtcgggtactcctactccaacaccagctccgatc 532 |||||||| |||| |||||||||||||||| | ||||||| ||||||||| | |||||| Sbjct: 30593946 tgctgttcgtggagtcccccgccggcgtcggcttctcctacaccaacaccaccaccgatc 30594005 Query: 533 t 533 | Sbjct: 30594006 t 30594006 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 274 ggccgcgccctcttctactggctcgtcgaggtcgcc 309 ||||||||||||||||||||| || |||||| |||| Sbjct: 30593567 ggccgcgccctcttctactggttcttcgaggccgcc 30593602 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ctcgtgctctggctcaacgg 353 |||||||||||||||||||| Sbjct: 4363877 ctcgtgctctggctcaacgg 4363858
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0069C14 Length = 150579 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctccgag 393 ||||| |||||||||||||| || || || ||||||||| ||||||| |||||| |||| Sbjct: 92187 ctcgtcctctggctcaacggaggccctggttgctcctccctcggctatggcgccctcgag 92246 Query: 394 gagctcggc 402 ||||||||| Sbjct: 92247 gagctcggc 92255 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 473 tgctgttcctggacgcccccgccggcgtcgggtactcctactccaacaccagctccgatc 532 |||||||| |||| |||||||||||||||| | ||||||| ||||||||| | |||||| Sbjct: 92509 tgctgttcgtggagtcccccgccggcgtcggcttctcctacaccaacaccaccaccgatc 92568 Query: 533 t 533 | Sbjct: 92569 t 92569 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 274 ggccgcgccctcttctactggctcgtcgaggtcgcc 309 ||||||||||||||||||||| || |||||| |||| Sbjct: 92130 ggccgcgccctcttctactggttcttcgaggccgcc 92165
>emb|AJ421152.1|SBI421152 Sorghum bicolor mRNA for hydroxynitrile lyase (hnl gene) Length = 1566 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 326 ccgccccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggc 378 |||| |||||||| |||||||||||||||||||| || ||||||||| ||||| Sbjct: 338 ccgcgccgctcgtcctctggctcaacggcgggcctgggtgctcctccatcggc 390
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctcc 369 ||||||||||||||||||||||| |||||||||||| Sbjct: 8833158 ctcgtgctctggctcaacggcggccccggctgctcc 8833123
>dbj|AK064874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J10, full insert sequence Length = 1797 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctcc 369 ||||||||||||||||||||||| |||||||||||| Sbjct: 306 ctcgtgctctggctcaacggcggccccggctgctcc 341
>dbj|D17586.1|RICCBPI Oryza sativa (japonica cultivar-group) gene for serine carboxypeptidase I, complete cds Length = 6399 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctcc 369 ||||||||||||||||||||||| |||||||||||| Sbjct: 949 ctcgtgctctggctcaacggcggccccggctgctcc 984
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctcc 369 ||||||||||||||||||||||| |||||||||||| Sbjct: 8833041 ctcgtgctctggctcaacggcggccccggctgctcc 8833006
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151176 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctcc 369 ||||||||||||||||||||||| |||||||||||| Sbjct: 21787 ctcgtgctctggctcaacggcggccccggctgctcc 21752
>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 195500 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctcc 369 ||||||||||||||||||||||| |||||||||||| Sbjct: 9011 ctcgtgctctggctcaacggcggccccggctgctcc 9046
>gb|BT018808.1| Zea mays clone EL01N0529H08.d mRNA sequence Length = 1840 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 335 tcgtgctctggctcaacggcgggcccggctgctcc 369 |||||||||||||||||||||| |||||||||||| Sbjct: 275 tcgtgctctggctcaacggcggccccggctgctcc 309
>emb|Y09603.1|HVCPI H.vulgare mRNA for serine carboxypeptidase I, CP-MI Length = 1885 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 335 tcgtgctctggctcaacggcgggcccggctgctcc 369 |||||||||||||||||||||| |||||||||||| Sbjct: 330 tcgtgctctggctcaacggcggccccggctgctcc 364
>ref|XM_473236.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1521 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 |||||| |||| ||||||||||| || ||||| ||||| ||||||| ||| |||||| || Sbjct: 235 ccgctcttgctgtggctcaacggaggtcccggatgctcatccgtcgcctatggcgccgcc 294 Query: 391 gaggagct 398 ||||||| Sbjct: 295 caggagct 302
>dbj|AK105830.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E06, full insert sequence Length = 1496 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctcctccgtcggctacggcgcctcc 390 |||||| |||| ||||||||||| || ||||| ||||| ||||||| ||| |||||| || Sbjct: 15 ccgctcttgctgtggctcaacggaggtcccggatgctcatccgtcgcctatggcgccgcc 74 Query: 391 gaggagct 398 ||||||| Sbjct: 75 caggagct 82
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 473 tgctgttcctggacgcccccgccggcgtcgggtactcctactccaacac 521 |||||||| | |||| ||| |||||||| |||||||| ||||||||||| Sbjct: 97727 tgctgttcgttgacgtcccagccggcgttgggtactcatactccaacac 97679
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 473 tgctgttcctggacgcccccgccggcgtcgggtactcctactccaacac 521 |||||||| | |||| ||| |||||||| |||||||| ||||||||||| Sbjct: 15239621 tgctgttcgttgacgtcccagccggcgttgggtactcatactccaacac 15239669 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 actggctcgtcgaggtcgccg 310 ||||||||||||||||||||| Sbjct: 22653914 actggctcgtcgaggtcgccg 22653934
>ref|XM_752940.1| Ustilago maydis 521 hypothetical protein (UM01886.1) partial mRNA Length = 1770 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 335 tcgtgctctggctcaacggcgggcccggctgctcctc 371 |||| |||||||||||||| || |||||||||||||| Sbjct: 578 tcgttctctggctcaacggtggacccggctgctcctc 614
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 473 tgctgttcctggacgcccccgccggcgtcgggtactcctactccaacac 521 |||||||| | |||| ||| |||||||| |||||||| ||||||||||| Sbjct: 15234155 tgctgttcgttgacgtcccagccggcgttgggtactcatactccaacac 15234203 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 actggctcgtcgaggtcgccg 310 ||||||||||||||||||||| Sbjct: 22646943 actggctcgtcgaggtcgccg 22646963
>dbj|AK066671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072A16, full insert sequence Length = 1768 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 473 tgctgttcctggacgcccccgccggcgtcgggtactcctactccaacac 521 |||||||| | |||| ||| |||||||| |||||||| ||||||||||| Sbjct: 403 tgctgttcgttgacgtcccagccggcgttgggtactcatactccaacac 451
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 338 tgctctggctcaacggcgggcccggctgctcc 369 |||||||||||| |||||| |||||||||||| Sbjct: 131083 tgctctggctcaccggcggccccggctgctcc 131114
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 338 tgctctggctcaacggcgggcccggctgctcc 369 |||||||||||| |||||| |||||||||||| Sbjct: 24654181 tgctctggctcaccggcggccccggctgctcc 24654212
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 338 tgctctggctcaacggcgggcccggctgctcc 369 |||||||||||| |||||| |||||||||||| Sbjct: 24965851 tgctctggctcaccggcggccccggctgctcc 24965882
>ref|XM_471833.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1515 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 335 tcgtgctctggctcaacggcgggcccggctgctcc 369 |||||||||||||||||||||| || || |||||| Sbjct: 254 tcgtgctctggctcaacggcggcccgggatgctcc 288
>ref|NM_194477.1| Oryza sativa (japonica cultivar-group) putative serine carboxypeptidase (OSJNBa0046L02.7), mRNA Length = 1299 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 338 tgctctggctcaacggcgggcccggctgctc 368 |||||||||||| ||||||||| |||||||| Sbjct: 269 tgctctggctcaccggcgggccaggctgctc 299
>ref|NM_197137.1| Oryza sativa (japonica cultivar-group) putative beta-tonoplast intrinsic protein (OSJNBa0051D19.19), mRNA Length = 1186 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 276 ccgcgccctcttctactggctcg 298 ||||||||||||||||||||||| Sbjct: 466 ccgcgccctcttctactggctcg 488
>gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0046L02, complete sequence Length = 142381 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 338 tgctctggctcaacggcgggcccggctgctc 368 |||||||||||| ||||||||| |||||||| Sbjct: 67975 tgctctggctcaccggcgggccaggctgctc 67945
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 ccgcgccctcttctactggctcg 298 ||||||||||||||||||||||| Sbjct: 26582 ccgcgccctcttctactggctcg 26560
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 338 tgctctggctcaacggcgggcccggctgctc 368 |||||||||||| ||||||||| |||||||| Sbjct: 82081 tgctctggctcaccggcgggccaggctgctc 82051
>emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062H02, complete sequence Length = 166747 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 335 tcgtgctctggctcaacggcgggcccggctgctcc 369 |||||||||||||||||||||| || || |||||| Sbjct: 17653 tcgtgctctggctcaacggcggcccgggatgctcc 17619
>gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1136E01, complete sequence Length = 105139 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 338 tgctctggctcaacggcgggcccggctgctc 368 |||||||||||| ||||||||| |||||||| Sbjct: 87220 tgctctggctcaccggcgggccaggctgctc 87190
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 118 gtgctgctggccgccatcctggc 140 ||||||||||||||||||||||| Sbjct: 1864613 gtgctgctggccgccatcctggc 1864635 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 cgtgctgctggccgccatcctggc 140 |||| ||||||||||||||||||| Sbjct: 3019116 cgtgatgctggccgccatcctggc 3019139 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctgctggccgccatcctgg 139 |||||||||||||||||||| Sbjct: 2946218 gctgctggccgccatcctgg 2946237
>gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cultivar Nipponbare clone OJ1136E01, from chromosome 10, complete sequence Length = 113856 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 338 tgctctggctcaacggcgggcccggctgctc 368 |||||||||||| ||||||||| |||||||| Sbjct: 31776 tgctctggctcaccggcgggccaggctgctc 31806
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 335 tcgtgctctggctcaacggcgggcccggctgctcc 369 |||||||||||||||||||||| || || |||||| Sbjct: 14860915 tcgtgctctggctcaacggcggcccgggatgctcc 14860881 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ctcgtcgaggtcgccgtcgc 314 |||||||||||||||||||| Sbjct: 34435739 ctcgtcgaggtcgccgtcgc 34435758
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 276 ccgcgccctcttctactggctcg 298 ||||||||||||||||||||||| Sbjct: 18186546 ccgcgccctcttctactggctcg 18186568 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 338 tgctctggctcaacggcgggcccggctgctc 368 |||||||||||| ||||||||| |||||||| Sbjct: 82081 tgctctggctcaccggcgggccaggctgctc 82051 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 gtccccctctgcggcggcggcggc 191 |||||||||| ||||||||||||| Sbjct: 17252021 gtccccctcttcggcggcggcggc 17251998
>dbj|AK111931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C03, full insert sequence Length = 1200 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 276 ccgcgccctcttctactggctcg 298 ||||||||||||||||||||||| Sbjct: 475 ccgcgccctcttctactggctcg 497
>dbj|AB114828.1| Oryza sativa (japonica cultivar-group) OsTIP3 mRNA for tonoplast intrinsic protein, complete cds Length = 1178 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 276 ccgcgccctcttctactggctcg 298 ||||||||||||||||||||||| Sbjct: 458 ccgcgccctcttctactggctcg 480
>dbj|AK106667.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-H08, full insert sequence Length = 1837 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 338 tgctctggctcaacggcgggcccggctgctc 368 |||||||||||| ||||||||| |||||||| Sbjct: 325 tgctctggctcaccggcgggccaggctgctc 355
>dbj|AK106383.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E03, full insert sequence Length = 1787 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 ccgcgccctcttctactggctcg 298 ||||||||||||||||||||||| Sbjct: 613 ccgcgccctcttctactggctcg 591
>dbj|AK099397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M18, full insert sequence Length = 1665 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 335 tcgtgctctggctcaacggcgggcccggctgctcc 369 |||||||||||||||||||||| || || |||||| Sbjct: 268 tcgtgctctggctcaacggcggcccgggatgctcc 302
>dbj|AK068732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159H01, full insert sequence Length = 1745 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 335 tcgtgctctggctcaacggcgggcccggctgctcc 369 |||||||||||||||||||||| || || |||||| Sbjct: 316 tcgtgctctggctcaacggcggcccgggatgctcc 350
>dbj|AK067247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098N22, full insert sequence Length = 1796 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctc 368 |||||||||||||||||||| ||||| || ||||| Sbjct: 321 ctcgtgctctggctcaacggagggccaggttgctc 355
>dbj|AK066243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J23, full insert sequence Length = 1798 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctc 368 |||||||||||||||||||| ||||| || ||||| Sbjct: 320 ctcgtgctctggctcaacggagggccaggttgctc 354
>gb|AY105122.1| Zea mays PCO098082 mRNA sequence Length = 670 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcccggctgctc 368 |||||||||||||||||||| ||||| || ||||| Sbjct: 449 ctcgtgctctggctcaacggagggcctggatgctc 483
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 276 ccgcgccctcttctactggctcg 298 ||||||||||||||||||||||| Sbjct: 18195799 ccgcgccctcttctactggctcg 18195821 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 338 tgctctggctcaacggcgggcccggctgctc 368 |||||||||||| ||||||||| |||||||| Sbjct: 82079 tgctctggctcaccggcgggccaggctgctc 82049 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 gtccccctctgcggcggcggcggc 191 |||||||||| ||||||||||||| Sbjct: 17261061 gtccccctcttcggcggcggcggc 17261038
>gb|AY497024.1| Trichophyton rubrum carboxypeptidase Y gene, complete cds Length = 1680 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 335 tcgtgctctggctcaacggcgggcccggctgctc 368 |||| ||||||||||||||||| || |||||||| Sbjct: 554 tcgtcctctggctcaacggcggcccaggctgctc 587
>ref|XM_507511.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1 mRNA Length = 1701 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcc 359 ||||| |||||||||||||||||||| Sbjct: 317 ctcgtcctctggctcaacggcgggcc 342
>ref|XM_507510.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1 mRNA Length = 1704 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcc 359 ||||| |||||||||||||||||||| Sbjct: 320 ctcgtcctctggctcaacggcgggcc 345
>ref|XM_506875.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1 mRNA Length = 1720 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcc 359 ||||| |||||||||||||||||||| Sbjct: 322 ctcgtcctctggctcaacggcgggcc 347
>gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome Length = 63882 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 tgctgctggccgccatcctggcgctg 144 |||||||||||||||| ||||||||| Sbjct: 10533 tgctgctggccgccatgctggcgctg 10508
>ref|XM_500219.1| Yarrowia lipolytica CLIB122, YALI0A18810g predicted mRNA Length = 1482 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 343 tggctcaacggcgggcccggctgctc 368 |||||||||||||| ||||||||||| Sbjct: 361 tggctcaacggcggccccggctgctc 386
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 gctggccgccatcctggcgctg 144 |||||||||||||||||||||| Sbjct: 790982 gctggccgccatcctggcgctg 790961
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 ggcggtggccgtgctgctggcc 129 |||||||||||||||||||||| Sbjct: 3424140 ggcggtggccgtgctgctggcc 3424119
>emb|X78878.1|HVACXPII2 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-2 Length = 1580 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 331 ccgctcgtgctctggctcaacggcgggcccggctgctc 368 |||||| |||||||||||||||| ||||| || ||||| Sbjct: 135 ccgctcctgctctggctcaacggagggcctggttgctc 172
>gb|U19367.1|CRU19367 Chlamydomonas reinhardtii transposable element Pioneer1, complete sequence Length = 2816 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 ctgcggcggcggcggccgaccg 197 |||||||||||||||||||||| Sbjct: 2206 ctgcggcggcggcggccgaccg 2185
>gb|AF306552.1|AF306552 Ralstonia eutropha BEC (bec) gene, complete cds Length = 1740 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 209 tgccgggccagccgccggtcaa 230 |||||||||||||||||||||| Sbjct: 1232 tgccgggccagccgccggtcaa 1253
>dbj|AK106111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D11, full insert sequence Length = 1701 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcc 359 ||||| |||||||||||||||||||| Sbjct: 317 ctcgtcctctggctcaacggcgggcc 342
>dbj|AK104431.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-H12, full insert sequence Length = 1704 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcc 359 ||||| |||||||||||||||||||| Sbjct: 320 ctcgtcctctggctcaacggcgggcc 345
>dbj|AK104329.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E12, full insert sequence Length = 1700 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcc 359 ||||| |||||||||||||||||||| Sbjct: 317 ctcgtcctctggctcaacggcgggcc 342
>dbj|AK069959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G19, full insert sequence Length = 1720 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 ctcgtgctctggctcaacggcgggcc 359 ||||| |||||||||||||||||||| Sbjct: 321 ctcgtcctctggctcaacggcgggcc 346
>gb|AY112148.1| Zea mays CL62029_1 mRNA sequence Length = 659 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 452 cctggaacaaaatggcgaacgtgctgttcctgga 485 ||||||||| | ||||||||||||||| |||||| Sbjct: 403 cctggaacacagtggcgaacgtgctgtacctgga 436
>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds; and unknown gene Length = 18555 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 ctgcggcggcggcggccgaccg 197 |||||||||||||||||||||| Sbjct: 13821 ctgcggcggcggcggccgaccg 13842
>gb|AF001578.1|AF001578 Haloferax volcanii tRNA intron endonuclease (endA) gene, complete cds, and putative tryptophanyl aminoacyl tRNA synthetase (trpS) gene, partial cds Length = 1511 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 261 cgacgcccccgcgggccgcgcc 282 |||||||||||||||||||||| Sbjct: 123 cgacgcccccgcgggccgcgcc 144
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 343 tggctcaacggcgggcccggctgctc 368 |||||||||||||| ||||||||||| Sbjct: 2026188 tggctcaacggcggccccggctgctc 2026213
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 actggctcgtcgaggtcgccg 310 ||||||||||||||||||||| Sbjct: 14232 actggctcgtcgaggtcgccg 14212
>ref|XM_467389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 gcggcggcggcggccgaccgc 198 ||||||||||||||||||||| Sbjct: 106 gcggcggcggcggccgaccgc 126
>ref|XM_463127.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1122 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 actggctcgtcgaggtcgccg 310 ||||||||||||||||||||| Sbjct: 431 actggctcgtcgaggtcgccg 451
>ref|XM_478140.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1461 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ggctcgtcgaggtcgccgtcg 313 ||||||||||||||||||||| Sbjct: 548 ggctcgtcgaggtcgccgtcg 528
>ref|XM_478130.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1461 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ggctcgtcgaggtcgccgtcg 313 ||||||||||||||||||||| Sbjct: 548 ggctcgtcgaggtcgccgtcg 528
>ref|XM_416750.1| PREDICTED: Gallus gallus similar to Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1) (LOC418542), mRNA Length = 3317 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 gcggtggccgtgctgctggcc 129 ||||||||||||||||||||| Sbjct: 99 gcggtggccgtgctgctggcc 119
>ref|XM_955807.1| Neurospora crassa OR74A hypothetical protein (NCU06720.1) partial mRNA Length = 1734 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 343 tggctcaacggcgggcccggctgctcctc 371 ||||||||||| || |||||||||||||| Sbjct: 370 tggctcaacggtggtcccggctgctcctc 398
>ref|XM_327005.1| Neurospora crassa OR74A hypothetical protein (NCU06720.1) partial mRNA Length = 1734 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 343 tggctcaacggcgggcccggctgctcctc 371 ||||||||||| || |||||||||||||| Sbjct: 370 tggctcaacggtggtcccggctgctcctc 398
>gb|AF542507.1| Oryza sativa Dof-like protein 34 mRNA, partial cds Length = 1134 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 gcggcggcggcggccgaccgc 198 ||||||||||||||||||||| Sbjct: 82 gcggcggcggcggccgaccgc 102
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 gcggcggcggcggccgaccgc 198 ||||||||||||||||||||| Sbjct: 104950 gcggcggcggcggccgaccgc 104970
>gb|AF223364.1|AF223364 Myxococcus xanthus tRNA/rRNA methyltransferase-like protein gene, partial cds; protein phosphatase 1 (pph1) and mannose-1-phosphate-guanyltransferase-like protein genes, complete cds; and unknown gene Length = 2686 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 acgtgctgttcctggacgccc 490 ||||||||||||||||||||| Sbjct: 464 acgtgctgttcctggacgccc 484
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 gcggcggcggcggccgaccgc 198 ||||||||||||||||||||| Sbjct: 29257681 gcggcggcggcggccgaccgc 29257661 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ccctctgcggcggcggcggc 191 |||||||||||||||||||| Sbjct: 27577861 ccctctgcggcggcggcggc 27577880
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 gctcgtcgaggtcgccgtcgc 314 ||||||||||||||||||||| Sbjct: 845535 gctcgtcgaggtcgccgtcgc 845515
>dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0683C09 Length = 185139 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ggctcgtcgaggtcgccgtcg 313 ||||||||||||||||||||| Sbjct: 147922 ggctcgtcgaggtcgccgtcg 147902
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 109 gcggtggccgtgctgctggccgcca 133 |||||||||| |||||||||||||| Sbjct: 1166717 gcggtggccgagctgctggccgcca 1166741
>dbj|AP005515.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0064M11 Length = 164263 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ggctcgtcgaggtcgccgtcg 313 ||||||||||||||||||||| Sbjct: 58210 ggctcgtcgaggtcgccgtcg 58190
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 gcggcggcggcggccgaccgc 198 ||||||||||||||||||||| Sbjct: 55026 gcggcggcggcggccgaccgc 55006
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 gcggcggcggcggccgaccgc 198 ||||||||||||||||||||| Sbjct: 147649 gcggcggcggcggccgaccgc 147629
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 gcgtccccctctgcggcggcggcgg 190 |||||||||||||||| |||||||| Sbjct: 666017 gcgtccccctctgcggaggcggcgg 665993
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gccgtgctgctggccgccat 134 |||||||||||||||||||| Sbjct: 3109221 gccgtgctgctggccgccat 3109240
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ccgtgctgctggccgccatc 135 |||||||||||||||||||| Sbjct: 981327 ccgtgctgctggccgccatc 981308
>ref|XM_474319.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ctcgtcgaggtcgccgtcgc 314 |||||||||||||||||||| Sbjct: 792 ctcgtcgaggtcgccgtcgc 773
>ref|NM_183863.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1626 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ctgcggcggcggcggccgac 195 |||||||||||||||||||| Sbjct: 221 ctgcggcggcggcggccgac 240
>gb|BT016570.1| Zea mays clone Contig403 mRNA sequence Length = 1313 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 ccccctctgcggcggcggcggccg 193 ||||||| |||||||||||||||| Sbjct: 131 ccccctcggcggcggcggcggccg 154
>gb|AF111167.2|DJ293M10 Homo sapiens jun dimerization protein gene, partial cds; cfos gene, complete cds; and unknown gene Length = 202267 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 cccctttccctcgcgtccccctct 177 |||||||||||| ||||||||||| Sbjct: 21695 cccctttccctcccgtccccctct 21718
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 cggctgctcctccgtcggct 379 |||||||||||||||||||| Sbjct: 166615 cggctgctcctccgtcggct 166596
>gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete sequence Length = 151609 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 actcctactccaacaccagctccg 529 ||||| |||||||||||||||||| Sbjct: 31533 actccaactccaacaccagctccg 31556
>gb|BT015207.1| Drosophila melanogaster RE58041 full insert cDNA Length = 3985 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 actcctactccaacaccagctccg 529 ||||| |||||||||||||||||| Sbjct: 2742 actccaactccaacaccagctccg 2765
>ref|XM_953540.1| Neurospora crassa OR74A hypothetical protein (NCU05980.1) partial mRNA Length = 1947 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gctcaacggcgggcccggct 364 |||||||||||||||||||| Sbjct: 324 gctcaacggcgggcccggct 343
>ref|XM_325834.1| Neurospora crassa OR74A hypothetical protein (NCU05980.1) partial mRNA Length = 1947 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gctcaacggcgggcccggct 364 |||||||||||||||||||| Sbjct: 324 gctcaacggcgggcccggct 343
>ref|XM_539199.2| PREDICTED: Canis familiaris similar to tigger transposable element derived 5 (LOC482078), mRNA Length = 2544 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 ggtggccgtgctgctggccgccatcctg 138 |||| |||||||||||||||||| |||| Sbjct: 1434 ggtgaccgtgctgctggccgccaacctg 1461
>gb|AC129919.9| Homo sapiens chromosome 17, clone RP13-1277B16, complete sequence Length = 182735 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tgcccgctccccctttccct 164 |||||||||||||||||||| Sbjct: 62623 tgcccgctccccctttccct 62642
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence Length = 159894 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ctcgtcgaggtcgccgtcgc 314 |||||||||||||||||||| Sbjct: 158813 ctcgtcgaggtcgccgtcgc 158832
>ref|XM_850357.1| PREDICTED: Canis familiaris similar to Fc fragment of IgG binding protein (LOC612624), mRNA Length = 5772 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 cgacgcccccgcgggccgcg 280 |||||||||||||||||||| Sbjct: 949 cgacgcccccgcgggccgcg 930
>gb|AC115099.6| Homo sapiens chromosome 17, clone RP11-149I9, complete sequence Length = 161156 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tgcccgctccccctttccct 164 |||||||||||||||||||| Sbjct: 51774 tgcccgctccccctttccct 51793
>emb|X78876.1|HVACXPII1 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-1 Length = 1252 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 gctccgatctgctcaccccc 543 |||||||||||||||||||| Sbjct: 3 gctccgatctgctcaccccc 22
>emb|X87973.1|AVDNAALGG A.vinelandii algG gene Length = 1926 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 387 ctccgaggagctcggcgccttccggatcaacg 418 ||||||||||| ||||||||||| | |||||| Sbjct: 595 ctccgaggagcgcggcgccttcctggtcaacg 626
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ggcggtggccgtgctgctgg 127 |||||||||||||||||||| Sbjct: 195622 ggcggtggccgtgctgctgg 195641
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ctcgtcgaggtcgccgtcgc 314 |||||||||||||||||||| Sbjct: 53224 ctcgtcgaggtcgccgtcgc 53243
>emb|AJ605333.1| Hordeum vulgare mRNA for fructan 1-exohydrolase precursor (1-feh gene) Length = 1994 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ccccctctgcggcggcggcg 189 |||||||||||||||||||| Sbjct: 125 ccccctctgcggcggcggcg 144
>emb|CR857818.1| Pongo pygmaeus mRNA; cDNA DKFZp459K2154 (from clone DKFZp459K2154) Length = 4525 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cccctttccctcgcgtcccc 173 |||||||||||||||||||| Sbjct: 3051 cccctttccctcgcgtcccc 3070
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 gtccccctctgcggcggcggcggc 191 |||||||||| ||||||||||||| Sbjct: 120258 gtccccctcttcggcggcggcggc 120281
>gb|AE005825.1| Caulobacter crescentus CB15 section 151 of 359 of the complete genome Length = 10680 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 tccggatcaacgccgacggc 426 |||||||||||||||||||| Sbjct: 5331 tccggatcaacgccgacggc 5312
>ref|NM_169786.1| Drosophila melanogaster stripe CG7847-RB, transcript variant B (sr), mRNA Length = 4406 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 actcctactccaacaccagctccg 529 ||||| |||||||||||||||||| Sbjct: 3178 actccaactccaacaccagctccg 3201
>ref|NM_079671.2| Drosophila melanogaster stripe CG7847-RA, transcript variant A (sr), mRNA Length = 5757 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 actcctactccaacaccagctccg 529 ||||| |||||||||||||||||| Sbjct: 4529 actccaactccaacaccagctccg 4552
>gb|S79891.1| sr=stripe {90E region, clone c5-1} [Drosophila, Canton Special, mRNA Partial, 2782 nt] Length = 2782 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 actcctactccaacaccagctccg 529 ||||| |||||||||||||||||| Sbjct: 1579 actccaactccaacaccagctccg 1602
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ccctctgcggcggcggcggc 191 |||||||||||||||||||| Sbjct: 89325 ccctctgcggcggcggcggc 89306
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 105 aatggcggtggccgtgctgctggccgcc 132 ||||||||||||| |||| ||||||||| Sbjct: 3143443 aatggcggtggccttgctcctggccgcc 3143470 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 caacggcgggcccggctgct 367 |||||||||||||||||||| Sbjct: 1943733 caacggcgggcccggctgct 1943714
>gb|AF193856.1|AF193856 Streptomyces coelicolor Pep and Pip genes, complete cds Length = 2628 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ggcggtggccgtgctgctgg 127 |||||||||||||||||||| Sbjct: 1641 ggcggtggccgtgctgctgg 1660
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ccctctgcggcggcggcggc 191 |||||||||||||||||||| Sbjct: 57530 ccctctgcggcggcggcggc 57549
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ctcgtgctctggctcaacgg 353 |||||||||||||||||||| Sbjct: 11558 ctcgtgctctggctcaacgg 11539
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ctcgtgctctggctcaacgg 353 |||||||||||||||||||| Sbjct: 55457 ctcgtgctctggctcaacgg 55438
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ctgcggcggcggcggccgac 195 |||||||||||||||||||| Sbjct: 22016 ctgcggcggcggcggccgac 22035
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ctgcggcggcggcggccgac 195 |||||||||||||||||||| Sbjct: 108646 ctgcggcggcggcggccgac 108665
>dbj|AK109377.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-G02, full insert sequence Length = 1145 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ctcgtcgaggtcgccgtcgc 314 |||||||||||||||||||| Sbjct: 648 ctcgtcgaggtcgccgtcgc 629
>dbj|AK121743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086B04, full insert sequence Length = 1174 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 gtccccctctgcggcggcggcggc 191 |||||||||| ||||||||||||| Sbjct: 57 gtccccctcttcggcggcggcggc 34
>dbj|AK119671.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-H08, full insert sequence Length = 1366 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ctcgtcgaggtcgccgtcgc 314 |||||||||||||||||||| Sbjct: 845 ctcgtcgaggtcgccgtcgc 826
>dbj|AB104726.1| Homo sapiens IRSp53 gene for insulin receptor substrate p53 L-form, M-form, T-form and S-form, complete cds, alternative splicing Length = 82262 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tgcccgctccccctttccct 164 |||||||||||||||||||| Sbjct: 29230 tgcccgctccccctttccct 29249
>ref|XM_308847.1| Anopheles gambiae str. PEST ENSANGP00000021651 (ENSANGG00000019162), partial mRNA Length = 1116 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tggcgaacgtgctgttcctg 483 |||||||||||||||||||| Sbjct: 431 tggcgaacgtgctgttcctg 450
>dbj|AK073916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071M20, full insert sequence Length = 1753 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ccctctgcggcggcggcggc 191 |||||||||||||||||||| Sbjct: 86 ccctctgcggcggcggcggc 105
>dbj|AK071276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088F18, full insert sequence Length = 1365 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ctcgtcgaggtcgccgtcgc 314 |||||||||||||||||||| Sbjct: 846 ctcgtcgaggtcgccgtcgc 827
>dbj|AK070445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052C15, full insert sequence Length = 1237 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 gtccccctctgcggcggcggcggc 191 |||||||||| ||||||||||||| Sbjct: 124 gtccccctcttcggcggcggcggc 101
>emb|AL691403.2|CNS07YOR Human chromosome 14 DNA sequence BAC C-3075F15 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181848 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 cccctttccctcgcgtccccctct 177 |||||||||||| ||||||||||| Sbjct: 8999 cccctttccctcccgtccccctct 8976
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 ggtggccgtgctgctggccg 130 |||||||||||||||||||| Sbjct: 1975207 ggtggccgtgctgctggccg 1975188
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 gatcaacgccgacggcagga 430 |||||||||||||||||||| Sbjct: 1595020 gatcaacgccgacggcagga 1595039
>gb|AY105905.1| Zea mays PCO066724 mRNA sequence Length = 897 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ctgcggcggcggcggccgac 195 |||||||||||||||||||| Sbjct: 331 ctgcggcggcggcggccgac 350
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ctcgtcgaggtcgccgtcgc 314 |||||||||||||||||||| Sbjct: 56995 ctcgtcgaggtcgccgtcgc 57014
>gb|AE003720.3| Drosophila melanogaster chromosome 3R, section 58 of 118 of the complete sequence Length = 228842 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 actcctactccaacaccagctccg 529 ||||| |||||||||||||||||| Sbjct: 200749 actccaactccaacaccagctccg 200772
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ggcggtggccgtgctgctgg 127 |||||||||||||||||||| Sbjct: 912166 ggcggtggccgtgctgctgg 912185
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ctgctggccgccatcctggcgctg 144 |||||||||||| ||||||||||| Sbjct: 145735 ctgctggccgccgtcctggcgctg 145712
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gctcgtcgaggtcgccgtcg 313 |||||||||||||||||||| Sbjct: 174187 gctcgtcgaggtcgccgtcg 174206
>emb|AJ580965.1|SHE580965 Suid herpesvirus 1 strain Kaplan UL5 gene, UL4 gene, UL6 gene (partial), UL3.5 gene, UL3 gene and UL2 gene (partial) Length = 5200 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ccctctgcggcggcggcggc 191 |||||||||||||||||||| Sbjct: 406 ccctctgcggcggcggcggc 387
>emb|X97257.1|PRVULGNS Suid herpesvirus 1 strain Kaplan UL[5,6,7,8,8.5,9,10,11,12,13] genes Length = 11059 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ccctctgcggcggcggcggc 191 |||||||||||||||||||| Sbjct: 10975 ccctctgcggcggcggcggc 10956
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 cggtggccgtgctgctggccgcca 133 |||||||||||| ||||||||||| Sbjct: 1091801 cggtggccgtgcagctggccgcca 1091824
>gb|U66829.1|SHU66829 Suid herpesvirus 1 UL5 gene, partial cds, UL6 and UL7 genes, complete cds, UL8 gene, partial cds Length = 3250 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ccctctgcggcggcggcggc 191 |||||||||||||||||||| Sbjct: 4 ccctctgcggcggcggcggc 23
>gb|U42403.1|DMU42403 Drosophila melanogaster stripe a protein mRNA, complete cds Length = 5754 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 actcctactccaacaccagctccg 529 ||||| |||||||||||||||||| Sbjct: 4524 actccaactccaacaccagctccg 4547
>gb|U42402.1|DMU42402 Drosophila melanogaster stripe b protein mRNA, complete cds Length = 4458 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 actcctactccaacaccagctccg 529 ||||| |||||||||||||||||| Sbjct: 3228 actccaactccaacaccagctccg 3251 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,307,581 Number of Sequences: 3902068 Number of extensions: 4307581 Number of successful extensions: 240624 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 228691 Number of HSP's gapped (non-prelim): 11926 length of query: 543 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 520 effective length of database: 17,143,297,704 effective search space: 8914514806080 effective search space used: 8914514806080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
