ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart11g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HIS8_LISMO (Q8Y5X8) Histidinol-phosphate aminotransferase (EC 2.... 29 7.9
2SELD2_EUBAC (Q9L473) Selenide, water dikinase 2 (EC 2.7.9.3) (Se... 29 7.9

>HIS8_LISMO (Q8Y5X8) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 360

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 262 LQDASLRQLDVLTANASAAAGVLSTVLQVT--VASRNPNDRVGVYYDRLDVYA 414
           ++ A +R++ +LT  A    G+L+ + + T  V   NPN+  G Y D  D+ A
Sbjct: 124 IEGAEVREIPLLTDGAHDLEGMLNAIDEKTTIVWICNPNNPTGNYIDLADIQA 176



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>SELD2_EUBAC (Q9L473) Selenide, water dikinase 2 (EC 2.7.9.3) (Selenophosphate|
           synthetase 2) (Selenium donor protein 2)
          Length = 367

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = +1

Query: 247 HPRFYLQDASLRQLDVLTANASAAAGVLSTVLQVTVASRNPNDRVGVYYDRLDVYASYKY 426
           HP   L +++ +  DVL        G+++T ++  +  +   D V      L+ YA+  +
Sbjct: 177 HPGRVLSNSAAKVGDVLVLTKPLGTGIINTGIKAGIVGQQTVDEVVKIMTHLNKYAALAF 236

Query: 427 QQITLASA 450
             I + SA
Sbjct: 237 DDIRVNSA 244


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.132    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,052,910
Number of Sequences: 219361
Number of extensions: 420223
Number of successful extensions: 1743
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1742
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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