ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart11f10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064N24, full insert sequence Length = 1487 Score = 680 bits (343), Expect = 0.0 Identities = 400/419 (95%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgag 185 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 350 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtggggagcggcgag 409 Query: 186 cgcgtggtggtgctgtcgcacggcttcggcacggaccagtccgcgtggagccgcgtgctg 245 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 410 cgggtggtggtgctgtcgcatggcttcgggacggaccagtcggcgtggagccgcgtgctg 469 Query: 246 ccgtacctgacccgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtc 305 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 470 ccgtacctcacccgcgaccaccgcgtcgtgctctacgacctcgtctgcgccggcagcgtc 529 Query: 306 aacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacctg 365 |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 530 aacccggaccacttcgacttccgccgctacgacaacctcgacgcctacgtcgacgacctg 589 Query: 366 ctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 425 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 ctcgccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 649 Query: 426 gccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 485 ||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 650 gccatgatcggcatcctcgcctccatccgacgacctgacctcttcgccaagcttgtcctc 709 Query: 486 atcggcgcctcgcctaggttcttgaacgacagcgactaccacggcgggttcgagctgga 544 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 atcggcgcctctccccggttcttgaacgacagcgactaccacggcgggttcgagctgga 768
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 609 bits (307), Expect = e-171 Identities = 355/371 (95%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgag 185 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 5390834 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtggggagcggcgag 5390893 Query: 186 cgcgtggtggtgctgtcgcacggcttcggcacggaccagtccgcgtggagccgcgtgctg 245 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 5390894 cgggtggtggtgctgtcgcatggcttcgggacggaccagtcggcgtggagccgcgtgctg 5390953 Query: 246 ccgtacctgacccgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtc 305 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5390954 ccgtacctcacccgcgaccaccgcgtcgtgctctacgacctcgtctgcgccggcagcgtc 5391013 Query: 306 aacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacctg 365 |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 5391014 aacccggaccacttcgacttccgccgctacgacaacctcgacgcctacgtcgacgacctg 5391073 Query: 366 ctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 425 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5391074 ctcgccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 5391133 Query: 426 gccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 485 ||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 5391134 gccatgatcggcatcctcgcctccatccgacgacctgacctcttcgccaagcttgtcctc 5391193 Query: 486 atcggcgcctc 496 ||||||||||| Sbjct: 5391194 atcggcgcctc 5391204 Score = 103 bits (52), Expect = 6e-19 Identities = 160/196 (81%) Strand = Plus / Minus Query: 305 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 364 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 18267977 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 18267918 Query: 365 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 424 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 18267917 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 18267858 Query: 425 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 484 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 18267857 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 18267798 Query: 485 catcggcgcctcgcct 500 | || |||||||||| Sbjct: 18267797 cctctccgcctcgcct 18267782 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 501 aggttcttgaacgacagcgactaccacggcgggttcgagctgga 544 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5391300 aggttcttgaacgacagcgactaccacggcgggttcgagctgga 5391343 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 195 gtgctgtcgcacggcttcggcacggaccagtc 226 |||||| ||||||| ||||| ||||||||||| Sbjct: 18268087 gtgctggcgcacgggttcgggacggaccagtc 18268056
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009J13, from chromosome 3, complete sequence Length = 147205 Score = 609 bits (307), Expect = e-171 Identities = 355/371 (95%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgag 185 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 97002 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtggggagcggcgag 97061 Query: 186 cgcgtggtggtgctgtcgcacggcttcggcacggaccagtccgcgtggagccgcgtgctg 245 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 97062 cgggtggtggtgctgtcgcatggcttcgggacggaccagtcggcgtggagccgcgtgctg 97121 Query: 246 ccgtacctgacccgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtc 305 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 97122 ccgtacctcacccgcgaccaccgcgtcgtgctctacgacctcgtctgcgccggcagcgtc 97181 Query: 306 aacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacctg 365 |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 97182 aacccggaccacttcgacttccgccgctacgacaacctcgacgcctacgtcgacgacctg 97241 Query: 366 ctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 425 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97242 ctcgccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 97301 Query: 426 gccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 485 ||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 97302 gccatgatcggcatcctcgcctccatccgacgacctgacctcttcgccaagcttgtcctc 97361 Query: 486 atcggcgcctc 496 ||||||||||| Sbjct: 97362 atcggcgcctc 97372 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 501 aggttcttgaacgacagcgactaccacggcgggttcgagctgga 544 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97468 aggttcttgaacgacagcgactaccacggcgggttcgagctgga 97511
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 609 bits (307), Expect = e-171 Identities = 355/371 (95%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgag 185 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 5390049 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtggggagcggcgag 5390108 Query: 186 cgcgtggtggtgctgtcgcacggcttcggcacggaccagtccgcgtggagccgcgtgctg 245 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 5390109 cgggtggtggtgctgtcgcatggcttcgggacggaccagtcggcgtggagccgcgtgctg 5390168 Query: 246 ccgtacctgacccgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtc 305 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5390169 ccgtacctcacccgcgaccaccgcgtcgtgctctacgacctcgtctgcgccggcagcgtc 5390228 Query: 306 aacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacctg 365 |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 5390229 aacccggaccacttcgacttccgccgctacgacaacctcgacgcctacgtcgacgacctg 5390288 Query: 366 ctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 425 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5390289 ctcgccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 5390348 Query: 426 gccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 485 ||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 5390349 gccatgatcggcatcctcgcctccatccgacgacctgacctcttcgccaagcttgtcctc 5390408 Query: 486 atcggcgcctc 496 ||||||||||| Sbjct: 5390409 atcggcgcctc 5390419 Score = 103 bits (52), Expect = 6e-19 Identities = 160/196 (81%) Strand = Plus / Minus Query: 305 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 364 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 18261518 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 18261459 Query: 365 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 424 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 18261458 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 18261399 Query: 425 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 484 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 18261398 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 18261339 Query: 485 catcggcgcctcgcct 500 | || |||||||||| Sbjct: 18261338 cctctccgcctcgcct 18261323 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 501 aggttcttgaacgacagcgactaccacggcgggttcgagctgga 544 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5390515 aggttcttgaacgacagcgactaccacggcgggttcgagctgga 5390558 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 195 gtgctgtcgcacggcttcggcacggaccagtc 226 |||||| ||||||| ||||| ||||||||||| Sbjct: 18261628 gtgctggcgcacgggttcgggacggaccagtc 18261597
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 609 bits (307), Expect = e-171 Identities = 355/371 (95%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgag 185 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 120725 gcgccgagcggggcgaagctgctgcagatcctgaacgtgcgggtggtggggagcggcgag 120784 Query: 186 cgcgtggtggtgctgtcgcacggcttcggcacggaccagtccgcgtggagccgcgtgctg 245 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 120785 cgggtggtggtgctgtcgcatggcttcgggacggaccagtcggcgtggagccgcgtgctg 120844 Query: 246 ccgtacctgacccgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtc 305 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 120845 ccgtacctcacccgcgaccaccgcgtcgtgctctacgacctcgtctgcgccggcagcgtc 120904 Query: 306 aacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacctg 365 |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 120905 aacccggaccacttcgacttccgccgctacgacaacctcgacgcctacgtcgacgacctg 120964 Query: 366 ctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 425 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120965 ctcgccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctcc 121024 Query: 426 gccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 485 ||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 121025 gccatgatcggcatcctcgcctccatccgacgacctgacctcttcgccaagcttgtcctc 121084 Query: 486 atcggcgcctc 496 ||||||||||| Sbjct: 121085 atcggcgcctc 121095 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 501 aggttcttgaacgacagcgactaccacggcgggttcgagctgga 544 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121191 aggttcttgaacgacagcgactaccacggcgggttcgagctgga 121234
>gb|AY109150.1| Zea mays PCO113685 mRNA sequence Length = 645 Score = 248 bits (125), Expect = 2e-62 Identities = 149/157 (94%) Strand = Plus / Plus Query: 386 ccgcatcccgcgctgcgccttcgtcggccactccgtctccgccatgatcggcatcctcgc 445 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 ccgcatcgcgcgctgcgccttcgtcggccactccgtctccgccatgatcggcatcctcgc 237 Query: 446 ctccatccgccgccccgacctcttcgccaagctcgtcctcatcggcgcctcgcctaggtt 505 |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 238 ctccatccgccgccccgagctcttcgccaagctcgtactcatcggcgcgtcgcccaggtt 297 Query: 506 cttgaacgacagcgactaccacggcgggttcgagctg 542 | |||||||| ||||||||||||||||||||||||| Sbjct: 298 cctgaacgaccacgactaccacggcgggttcgagctg 334
>gb|AY389613.1| Hyacinthus orientalis esterase/lipase/thioesterase mRNA, partial cds Length = 485 Score = 222 bits (112), Expect = 9e-55 Identities = 199/228 (87%) Strand = Plus / Plus Query: 258 cgcgaccaccgcgtggtgctctacgacctcgtctgcgccggcagcgtcaacccggaccac 317 |||||||||||| | || ||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 159 cgcgaccaccgcatcgtcctctacgacctcgcctgcgccggcagcgtcaaccccgaccac 218 Query: 318 ttcgacttccgccgctacaacaacctggacgcctacgtggacgacctgctctccatcctc 377 ||||||||| |||||||| | ||| ||||||||||| |||||||| ||||||||| || Sbjct: 219 ttcgacttcgcccgctacacctccctcgacgcctacgtcgacgacctcctctccatcatc 278 Query: 378 gacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctccgccatgatcggc 437 ||||| ||||||||| |||||| || |||||| ||||||| ||||||||||| ||||| Sbjct: 279 gacgccctccgcatcgaccgctgctccctcgtcgcccactccttctccgccatggtcggc 338 Query: 438 atcctcgcctccatccgccgccccgacctcttcgccaagctcgtcctc 485 ||||||||||||||||||||||| | |||||| ||||||| ||||| Sbjct: 339 gtcctcgcctccatccgccgcccccagctcttccacaagctcatcctc 386 Score = 65.9 bits (33), Expect = 1e-07 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 141 aagctgctgcagatcctgaacgtgcgggtggtgggcaccggcgagc-gcgtggtggtgct 199 ||||||||| |||| ||||||||| ||||||||||| ||||| ||| |||||||| || Sbjct: 42 aagctgctggagatactgaacgtgagggtggtgggctccggc-agcaaggtggtggttct 100 Query: 200 gtcgcacggcttcggcacggaccagtccgcgtggagc 236 || |||||||||||||| |||||||| | ||||||| Sbjct: 101 ctcccacggcttcggcaccgaccagtctgtgtggagc 137
>emb|AM260506.1| Platanus acerifolia partial mRNA for hydrolase (hyd2 gene) Length = 828 Score = 131 bits (66), Expect = 3e-27 Identities = 198/242 (81%) Strand = Plus / Plus Query: 276 ctctacgacctcgtctgcgccggcagcgtcaacccggaccacttcgacttccgccgctac 335 ||||||||||||||||||||||| ||||| ||||| || ||||| |||||||| || ||| Sbjct: 294 ctctacgacctcgtctgcgccggtagcgtaaaccccgatcactttgacttccgacgatac 353 Query: 336 aacaacctggacgcctacgtggacgacctgctctccatcctcgacgcgctccgcatcccg 395 | || || |||||||||| || ||| | ||| ||||||||| || ||| |||| Sbjct: 354 accagtctctacgcctacgtcgaagacttactccacatcctcgaggctctcggcattgaa 413 Query: 396 cgctgcgccttcgtcggccactccgtctccgccatgatcggcatcctcgcctccatccgc 455 || |||| |||||||||||| |||| ||||||||||||||||| ||||| || ||| Sbjct: 414 aaatgtgcctatgtcggccactccatctctgccatgatcggcatcctagcctcaattcgc 473 Query: 456 cgccccgacctcttcgccaagctcgtcctcatcggcgcctcgcctaggttcttgaacgac 515 ||||| || |||||| |||| ||||||||||| |||||||| || |||||||| |||||| Sbjct: 474 cgccctgatctcttcaccaaactcgtcctcattggcgcctcacccaggttcttaaacgac 533 Query: 516 ag 517 || Sbjct: 534 ag 535
>ref|XM_468840.1| Oryza sativa (japonica cultivar-group), mRNA Length = 942 Score = 103 bits (52), Expect = 6e-19 Identities = 160/196 (81%) Strand = Plus / Plus Query: 305 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 364 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 174 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 233 Query: 365 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 424 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 234 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 293 Query: 425 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 484 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 294 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 353 Query: 485 catcggcgcctcgcct 500 | || |||||||||| Sbjct: 354 cctctccgcctcgcct 369 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 195 gtgctgtcgcacggcttcggcacggaccagtc 226 |||||| ||||||| ||||| ||||||||||| Sbjct: 64 gtgctggcgcacgggttcgggacggaccagtc 95
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 103 bits (52), Expect = 6e-19 Identities = 160/196 (81%) Strand = Plus / Minus Query: 305 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 364 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 34408 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 34349 Query: 365 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 424 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 34348 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 34289 Query: 425 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 484 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 34288 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 34229 Query: 485 catcggcgcctcgcct 500 | || |||||||||| Sbjct: 34228 cctctccgcctcgcct 34213 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 195 gtgctgtcgcacggcttcggcacggaccagtc 226 |||||| ||||||| ||||| ||||||||||| Sbjct: 34518 gtgctggcgcacgggttcgggacggaccagtc 34487
>dbj|AK104400.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E03, full insert sequence Length = 1175 Score = 103 bits (52), Expect = 6e-19 Identities = 160/196 (81%) Strand = Plus / Plus Query: 305 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 364 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 322 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 381 Query: 365 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 424 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 382 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 441 Query: 425 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 484 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 442 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 501 Query: 485 catcggcgcctcgcct 500 | || |||||||||| Sbjct: 502 cctctccgcctcgcct 517 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 195 gtgctgtcgcacggcttcggcacggaccagtc 226 |||||| ||||||| ||||| ||||||||||| Sbjct: 212 gtgctggcgcacgggttcgggacggaccagtc 243
>dbj|AK104138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H10, full insert sequence Length = 1172 Score = 103 bits (52), Expect = 6e-19 Identities = 160/196 (81%) Strand = Plus / Plus Query: 305 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 364 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 319 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 378 Query: 365 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 424 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 379 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 438 Query: 425 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 484 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 439 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 498 Query: 485 catcggcgcctcgcct 500 | || |||||||||| Sbjct: 499 cctctccgcctcgcct 514 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 195 gtgctgtcgcacggcttcggcacggaccagtc 226 |||||| ||||||| ||||| ||||||||||| Sbjct: 209 gtgctggcgcacgggttcgggacggaccagtc 240
>dbj|AK073355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A08, full insert sequence Length = 1245 Score = 103 bits (52), Expect = 6e-19 Identities = 160/196 (81%) Strand = Plus / Plus Query: 305 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 364 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 321 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 380 Query: 365 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 424 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 381 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 440 Query: 425 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 484 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 441 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 500 Query: 485 catcggcgcctcgcct 500 | || |||||||||| Sbjct: 501 cctctccgcctcgcct 516 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 195 gtgctgtcgcacggcttcggcacggaccagtc 226 |||||| ||||||| ||||| ||||||||||| Sbjct: 211 gtgctggcgcacgggttcgggacggaccagtc 242
>dbj|AK061303.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G08, full insert sequence Length = 1070 Score = 103 bits (52), Expect = 6e-19 Identities = 160/196 (81%) Strand = Plus / Plus Query: 305 caacccggaccacttcgacttccgccgctacaacaacctggacgcctacgtggacgacct 364 |||||||||| ||||||||||| ||||||| || ||| || | ||||| | |||||| Sbjct: 222 caacccggactacttcgacttctcccgctacgccaccctcgagggctacgcgctcgacct 281 Query: 365 gctctccatcctcgacgcgctccgcatcccgcgctgcgccttcgtcggccactccgtctc 424 ||| |||||||| | | ||||||| || | |||| || |||||||||||||||||| Sbjct: 282 cctcgccatcctccaggagctccgcgtcgcctcctgcatctacgtcggccactccgtctc 341 Query: 425 cgccatgatcggcatcctcgcctccatccgccgccccgacctcttcgccaagctcgtcct 484 |||| | |||||| | ||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 342 cgccgtcatcggcgccatcgcctccatctcccgccccgacctcttctccaagctcgtcct 401 Query: 485 catcggcgcctcgcct 500 | || |||||||||| Sbjct: 402 cctctccgcctcgcct 417 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 195 gtgctgtcgcacggcttcggcacggaccagtc 226 |||||| ||||||| ||||| ||||||||||| Sbjct: 112 gtgctggcgcacgggttcgggacggaccagtc 143
>dbj|AK070773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072C11, full insert sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 407 cgtcggccactccgtctccgccatgatcggcatcctcgcctccatccgccgccccgacct 466 |||||||||||||||||||||| | |||||| | ||||||||||| |||||||||||| Sbjct: 60 cgtcggccactccgtctccgccgtcatcggcgccatcgcctccatctcccgccccgacct 119 Query: 467 cttcgccaagctcgtcctcatcggcgcctcgcct 500 ||| |||||||||||||| || |||||||||| Sbjct: 120 tttctccaagctcgtcctcctctccgcctcgcct 153
>gb|AY105548.1| Zea mays PCO095526 mRNA sequence Length = 852 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 195 gtgctgtcgcacggcttcggcacggaccagtccgcgtgga 234 |||||| |||||||||||||||| |||||||||| ||||| Sbjct: 293 gtgctggcgcacggcttcggcaccgaccagtccgtgtgga 332 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 407 cgtcggccactccgtctccgccatgatcggcatcctcgcctccatccgccgccccgacct 466 ||||||||||||||||||||| | |||||| |||||||||||| | | || ||||| Sbjct: 505 cgtcggccactccgtctccgcggtcatcggcgcgctcgcctccatctccaggcctgacct 564 Query: 467 cttcgccaagctcgt 481 |||| |||||||||| Sbjct: 565 cttcaccaagctcgt 579
>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 Length = 348517 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 345 gacgcctacgtggacgacctgctc 368 |||||||||||||||||||||||| Sbjct: 85343 gacgcctacgtggacgacctgctc 85320
>ref|XM_482242.1| Oryza sativa (japonica cultivar-group), mRNA Length = 911 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 tggtgggcaccggcgagcgcgt 190 |||||||||||||||||||||| Sbjct: 205 tggtgggcaccggcgagcgcgt 184
>ref|XM_507223.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1198_B10.8 mRNA Length = 1009 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 tggtgggcaccggcgagcgcgt 190 |||||||||||||||||||||| Sbjct: 226 tggtgggcaccggcgagcgcgt 205
>ref|XM_507222.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1198_B10.8 mRNA Length = 1358 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 tggtgggcaccggcgagcgcgt 190 |||||||||||||||||||||| Sbjct: 311 tggtgggcaccggcgagcgcgt 290
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 cgcctccatccgccgccccgacctct 468 ||||||||||||||||| |||||||| Sbjct: 257921 cgcctccatccgccgcctcgacctct 257946
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 cgtggtgctctacgacctcgtc 290 |||||||||||||||||||||| Sbjct: 1257 cgtggtgctctacgacctcgtc 1278
>ref|XM_842567.1| Leishmania major strain Friedlin 3,2-trans-enoyl-CoA isomerase, mitochondrial precursor-like protein (LMJ_0637) partial mRNA Length = 891 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 cgtggtgctctacgacctcgtc 290 |||||||||||||||||||||| Sbjct: 667 cgtggtgctctacgacctcgtc 646
>ref|XM_572823.1| Cryptococcus neoformans var. neoformans JEC21 inositolphosphorylceramide synthase (CNI01040) partial mRNA Length = 1514 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 cgcctccatccgccgccccgacctct 468 ||||||||||||||||| |||||||| Sbjct: 143 cgcctccatccgccgcctcgacctct 168
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 tggtgggcaccggcgagcgcgt 190 |||||||||||||||||||||| Sbjct: 18949872 tggtgggcaccggcgagcgcgt 18949851
>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1198_B10 Length = 119768 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 tggtgggcaccggcgagcgcgt 190 |||||||||||||||||||||| Sbjct: 34792 tggtgggcaccggcgagcgcgt 34771
>dbj|AK109817.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A02, full insert sequence Length = 1358 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 tggtgggcaccggcgagcgcgt 190 |||||||||||||||||||||| Sbjct: 311 tggtgggcaccggcgagcgcgt 290
>dbj|AK098973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089E18, full insert sequence Length = 913 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 tggtgggcaccggcgagcgcgt 190 |||||||||||||||||||||| Sbjct: 205 tggtgggcaccggcgagcgcgt 184
>dbj|AK060114.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D12, full insert sequence Length = 1009 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 tggtgggcaccggcgagcgcgt 190 |||||||||||||||||||||| Sbjct: 226 tggtgggcaccggcgagcgcgt 205
>gb|AF126180.1|AF126180 Filobasidiella neoformans inositolphosphorylceramide synthase (IPC1) gene, complete cds Length = 1600 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 cgcctccatccgccgccccgacctct 468 ||||||||||||||||| |||||||| Sbjct: 172 cgcctccatccgccgcctcgacctct 197
>ref|NM_194743.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0013J21.2), mRNA Length = 426 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctg 146 ||||||||||||||||||||| Sbjct: 28 gcgccgagcggggcgaagctg 48
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctg 146 ||||||||||||||||||||| Sbjct: 10630 gcgccgagcggggcgaagctg 10650
>ref|XM_756575.1| Ustilago maydis 521 hypothetical protein (UM05521.1) partial mRNA Length = 1827 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 426 gccatgatcggcatcctcgcctcca 450 |||||||||||||||||| |||||| Sbjct: 279 gccatgatcggcatcctcacctcca 255
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctg 146 ||||||||||||||||||||| Sbjct: 2032490 gcgccgagcggggcgaagctg 2032510
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctg 146 ||||||||||||||||||||| Sbjct: 123219 gcgccgagcggggcgaagctg 123239
>gb|AE011626.1| Xanthomonas axonopodis pv. citri str. 306, section 4 of 469 of the complete genome Length = 11366 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 caccggcgagcgcgtggtggtgctg 200 ||||||| ||||||||||||||||| Sbjct: 5753 caccggcaagcgcgtggtggtgctg 5729
>gb|S64103.1| oar=OmpA-related protein, mlpA=putative lipoprotein [Myxococcus xanthus, Genomic, 4710 nt] Length = 4710 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cgatggtcgggggcgcgccga 132 ||||||||||||||||||||| Sbjct: 622 cgatggtcgggggcgcgccga 602
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 375 ctcgacgcgctccgcatcccgcgctgcgccttcgtcggcca 415 ||||||||||| ||||||| |||||||| |||||||||| Sbjct: 1438018 ctcgacgcgctgcgcatccagcgctgcgtgctcgtcggcca 1437978
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctg 146 ||||||||||||||||||||| Sbjct: 2032490 gcgccgagcggggcgaagctg 2032510
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgccgagcggggcgaagctg 146 ||||||||||||||||||||| Sbjct: 2032441 gcgccgagcggggcgaagctg 2032461
>gb|AE008737.2| Salmonella typhimurium LT2, section 45 of 220 of the complete genome Length = 65219 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 cgcgctccgcatcccgcgctgcgc 403 |||||||||||| ||||||||||| Sbjct: 7675 cgcgctccgcataccgcgctgcgc 7652
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cgaccaccgcgtggtgctctacga 283 ||||||||||||||||||| |||| Sbjct: 159499 cgaccaccgcgtggtgctcgacga 159522
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cgaccaccgcgtggtgctctacga 283 ||||||||||||||||||| |||| Sbjct: 72305 cgaccaccgcgtggtgctcgacga 72328
>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 4/20 Length = 294050 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 cgcgctccgcatcccgcgctgcgc 403 |||||||||||| ||||||||||| Sbjct: 152602 cgcgctccgcataccgcgctgcgc 152579
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgacctcgtctgcgccggca 300 |||||||||||||||||||| Sbjct: 158874 cgacctcgtctgcgccggca 158893
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 tgatcggcatcctcgcctccatcc 453 |||||||||||||||||| ||||| Sbjct: 133278 tgatcggcatcctcgcctgcatcc 133255
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccggccccggcgtccggctc 103 |||||||||||||||||||| Sbjct: 799432 ccggccccggcgtccggctc 799413
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcagtcgtctcatgctccgg 32 |||||||||||||||||||| Sbjct: 3476806 tcagtcgtctcatgctccgg 3476787
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 gctgccgtacctgacccgcgaccaccgc 269 |||| ||||||| ||||||||||||||| Sbjct: 425373 gctgacgtacctcacccgcgaccaccgc 425346
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 459 cccgacctcttcgccaagctcgtc 482 ||||| |||||||||||||||||| Sbjct: 9932225 cccgagctcttcgccaagctcgtc 9932248
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gggcaccggcgagcgcgtgg 192 |||||||||||||||||||| Sbjct: 7423650 gggcaccggcgagcgcgtgg 7423631
>dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021H05 Length = 159111 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 459 cccgacctcttcgccaagctcgtc 482 ||||| |||||||||||||||||| Sbjct: 5790 cccgagctcttcgccaagctcgtc 5813
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 459 cccgacctcttcgccaagctcgtc 482 ||||| |||||||||||||||||| Sbjct: 128860 cccgagctcttcgccaagctcgtc 128883
>dbj|AK109146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F04, full insert sequence Length = 1184 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 cccgcgctgcgccttcgtcg 411 |||||||||||||||||||| Sbjct: 295 cccgcgctgcgccttcgtcg 314
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 cgcgctccgcatcccgcgctgcgc 403 |||||||||||| ||||||||||| Sbjct: 2069475 cgcgctccgcataccgcgctgcgc 2069498
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 cgcgctccgcatcccgcgctgcgc 403 |||||||||||| ||||||||||| Sbjct: 984925 cgcgctccgcataccgcgctgcgc 984902
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cgatggtcgggggcgcgccg 131 |||||||||||||||||||| Sbjct: 2078560 cgatggtcgggggcgcgccg 2078541
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 gctgccgtacctgacccgcgaccaccgc 269 |||| ||||||| ||||||||||||||| Sbjct: 425373 gctgacgtacctcacccgcgaccaccgc 425346
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 gctgccgtacctgacccgcgaccaccgc 269 |||| ||||||| ||||||||||||||| Sbjct: 121399 gctgacgtacctcacccgcgaccaccgc 121426 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,501,962 Number of Sequences: 3902068 Number of extensions: 2501962 Number of successful extensions: 57243 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55779 Number of HSP's gapped (non-prelim): 1464 length of query: 544 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 521 effective length of database: 17,143,297,704 effective search space: 8931658103784 effective search space used: 8931658103784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
