ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart11e10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK063937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-D11, full insert sequence Length = 1188 Score = 268 bits (135), Expect = 2e-68 Identities = 258/299 (86%) Strand = Plus / Plus Query: 235 gaggaggccttcgaagacgcgctcaccgacgagcagctgcgggagaaagctagaagccaa 294 |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 328 gaggaggccttcgaggacgcgctgaccgacgagcagctccgggagaaagctagaagccaa 387 Query: 295 gcaaacgatgcaaaagcagaaggaaacaaacattttgcagctggagagtacgaagatgca 354 ||||| |||||||| |||||||| ||||| ||||| |||||||| || || ||| Sbjct: 388 gcaaatgatgcaaaggcagaagggaacaagttttttggtgctggagaatatgagagggca 447 Query: 355 ttatcaaaatatgaaattgcattgcaaattgctgctgaactggaatcttctgaagatata 414 || || ||||||| | || ||||||||||||||||| ||||||||| | ||||| ||| Sbjct: 448 ttgtcgcaatatgagacagctttgcaaattgctgctgagctggaatctgccgaagacata 507 Query: 415 tcctctgcatgccattcaaatcgtgctgtatgtttcttgaaattggggaaatatgatgaa 474 ||| ||||| |||||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 508 cgctccgcatgtcattcaaatcgtgctgtatgcttcttgaagttgggcaaatatgatgaa 567 Query: 475 acagttaaggagtgcaccaaagcgcttgagctgaatccttcatatttgaaagccttgct 533 ||| | || || ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 568 acaatcaaagaatgcaccaaagcacttgagctgaatccttcatacttgaaagccttgct 626 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 126 gatggtggtgatcgagctcgagccggag 153 ||||||||||||||||| ||||||||| Sbjct: 198 gatggtggtgatcgagcaggagccggag 225
>ref|NM_197088.1| Oryza sativa (japonica cultivar-group) putative tetratricopeptide repeat protein (OSJNBa0029C15.16), mRNA Length = 1647 Score = 202 bits (102), Expect = 8e-49 Identities = 216/254 (85%) Strand = Plus / Plus Query: 280 aaagctagaagccaagcaaacgatgcaaaagcagaaggaaacaaacattttgcagctgga 339 |||||||||||||||||||| |||||||| |||||||| ||||| ||||| |||||| Sbjct: 1111 aaagctagaagccaagcaaatgatgcaaaggcagaagggaacaagttttttggtgctgga 1170 Query: 340 gagtacgaagatgcattatcaaaatatgaaattgcattgcaaattgctgctgaactggaa 399 || || || ||||| || ||||||| | || ||||||||||||||||| |||||| Sbjct: 1171 gaatatgagagggcattgtcgcaatatgagacagctttgcaaattgctgctgagctggaa 1230 Query: 400 tcttctgaagatatatcctctgcatgccattcaaatcgtgctgtatgtttcttgaaattg 459 ||| | ||||| ||| ||| ||||| |||||||||||||||||||| |||||||| ||| Sbjct: 1231 tctgccgaagacatacgctccgcatgtcattcaaatcgtgctgtatgcttcttgaagttg 1290 Query: 460 gggaaatatgatgaaacagttaaggagtgcaccaaagcgcttgagctgaatccttcatat 519 || ||||||||||||||| | || || ||||||||||| |||||||||||||||||||| Sbjct: 1291 ggcaaatatgatgaaacaatcaaagaatgcaccaaagcacttgagctgaatccttcatac 1350 Query: 520 ttgaaagccttgct 533 |||||||||||||| Sbjct: 1351 ttgaaagccttgct 1364 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 235 gaggaggccttcgaagacgcgctcaccgacgagcagctgcgggag 279 |||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 625 gaggaggccttcgaggacgcgctgaccgacgagcagctccgggag 669 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 126 gatggtggtgatcgagctcgagccggag 153 ||||||||||||||||| ||||||||| Sbjct: 495 gatggtggtgatcgagcaggagccggag 522
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 117 bits (59), Expect = 4e-23 Identities = 152/183 (83%) Strand = Plus / Minus Query: 278 agaaagctagaagccaagcaaacgatgcaaaagcagaaggaaacaaacattttgcagctg 337 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| |||| Sbjct: 23625 agaaagctagaagccaagcaaatgatgcaaaggcagaagggaacaagttttttggtgctg 23566 Query: 338 gagagtacgaagatgcattatcaaaatatgaaattgcattgcaaattgctgctgaactgg 397 |||| || || ||||| || ||||||| | || ||||||||||||||||| |||| Sbjct: 23565 gagaatatgagagggcattgtcgcaatatgagacagctttgcaaattgctgctgagctgg 23506 Query: 398 aatcttctgaagatatatcctctgcatgccattcaaatcgtgctgtatgtttcttgaaat 457 ||||| | ||||| ||| ||| ||||| |||||||||||||||||||| |||||||| | Sbjct: 23505 aatctgccgaagacatacgctccgcatgtcattcaaatcgtgctgtatgcttcttgaagt 23446 Query: 458 tgg 460 ||| Sbjct: 23445 tgg 23443 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 463 aaatatgatgaaacagttaaggagtgcaccaaagcgcttgagctgaatccttcatatttg 522 ||||||||||||||| | || || ||||||||||| |||||||||||||||||||| ||| Sbjct: 22974 aaatatgatgaaacaatcaaagaatgcaccaaagcacttgagctgaatccttcatacttg 22915 Query: 523 aaagccttgct 533 ||||||||||| Sbjct: 22914 aaagccttgct 22904 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 235 gaggaggccttcgaagacgcgctcaccgacgagcagctgcgggag 279 |||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 26184 gaggaggccttcgaggacgcgctgaccgacgagcagctccgggag 26140 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 126 gatggtggtgatcgagctcgagccggag 153 ||||||||||||||||| ||||||||| Sbjct: 26314 gatggtggtgatcgagcaggagccggag 26287
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 117 bits (59), Expect = 4e-23 Identities = 152/183 (83%) Strand = Plus / Plus Query: 278 agaaagctagaagccaagcaaacgatgcaaaagcagaaggaaacaaacattttgcagctg 337 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| |||| Sbjct: 17908416 agaaagctagaagccaagcaaatgatgcaaaggcagaagggaacaagttttttggtgctg 17908475 Query: 338 gagagtacgaagatgcattatcaaaatatgaaattgcattgcaaattgctgctgaactgg 397 |||| || || ||||| || ||||||| | || ||||||||||||||||| |||| Sbjct: 17908476 gagaatatgagagggcattgtcgcaatatgagacagctttgcaaattgctgctgagctgg 17908535 Query: 398 aatcttctgaagatatatcctctgcatgccattcaaatcgtgctgtatgtttcttgaaat 457 ||||| | ||||| ||| ||| ||||| |||||||||||||||||||| |||||||| | Sbjct: 17908536 aatctgccgaagacatacgctccgcatgtcattcaaatcgtgctgtatgcttcttgaagt 17908595 Query: 458 tgg 460 ||| Sbjct: 17908596 tgg 17908598 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 463 aaatatgatgaaacagttaaggagtgcaccaaagcgcttgagctgaatccttcatatttg 522 ||||||||||||||| | || || ||||||||||| |||||||||||||||||||| ||| Sbjct: 17909067 aaatatgatgaaacaatcaaagaatgcaccaaagcacttgagctgaatccttcatacttg 17909126 Query: 523 aaagccttgct 533 ||||||||||| Sbjct: 17909127 aaagccttgct 17909137 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 235 gaggaggccttcgaagacgcgctcaccgacgagcagctgcgggag 279 |||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 17905857 gaggaggccttcgaggacgcgctgaccgacgagcagctccgggag 17905901 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 126 gatggtggtgatcgagctcgagccggag 153 ||||||||||||||||| ||||||||| Sbjct: 17905727 gatggtggtgatcgagcaggagccggag 17905754
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 117 bits (59), Expect = 4e-23 Identities = 152/183 (83%) Strand = Plus / Plus Query: 278 agaaagctagaagccaagcaaacgatgcaaaagcagaaggaaacaaacattttgcagctg 337 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| |||| Sbjct: 17917669 agaaagctagaagccaagcaaatgatgcaaaggcagaagggaacaagttttttggtgctg 17917728 Query: 338 gagagtacgaagatgcattatcaaaatatgaaattgcattgcaaattgctgctgaactgg 397 |||| || || ||||| || ||||||| | || ||||||||||||||||| |||| Sbjct: 17917729 gagaatatgagagggcattgtcgcaatatgagacagctttgcaaattgctgctgagctgg 17917788 Query: 398 aatcttctgaagatatatcctctgcatgccattcaaatcgtgctgtatgtttcttgaaat 457 ||||| | ||||| ||| ||| ||||| |||||||||||||||||||| |||||||| | Sbjct: 17917789 aatctgccgaagacatacgctccgcatgtcattcaaatcgtgctgtatgcttcttgaagt 17917848 Query: 458 tgg 460 ||| Sbjct: 17917849 tgg 17917851 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 463 aaatatgatgaaacagttaaggagtgcaccaaagcgcttgagctgaatccttcatatttg 522 ||||||||||||||| | || || ||||||||||| |||||||||||||||||||| ||| Sbjct: 17918320 aaatatgatgaaacaatcaaagaatgcaccaaagcacttgagctgaatccttcatacttg 17918379 Query: 523 aaagccttgct 533 ||||||||||| Sbjct: 17918380 aaagccttgct 17918390 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 235 gaggaggccttcgaagacgcgctcaccgacgagcagctgcgggag 279 |||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 17915110 gaggaggccttcgaggacgcgctgaccgacgagcagctccgggag 17915154 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 126 gatggtggtgatcgagctcgagccggag 153 ||||||||||||||||| ||||||||| Sbjct: 17914980 gatggtggtgatcgagcaggagccggag 17915007
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 gacgcgctcaccgacgagcagct 272 ||||||||||||||||||||||| Sbjct: 159227 gacgcgctcaccgacgagcagct 159249
>gb|AC125158.3| Mus musculus BAC clone RP24-391P1 from chromosome 5, complete sequence Length = 160775 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 216 gaggagggcggaggaggacgaggagg 241 |||||||| ||||||||||||||||| Sbjct: 33847 gaggaggggggaggaggacgaggagg 33872
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 102 cggcggcgaccaccggaggcgagaga 127 |||||||||||||||| ||||||||| Sbjct: 40348 cggcggcgaccaccggcggcgagaga 40373
>ref|XM_521656.1| PREDICTED: Pan troglodytes similar to leucine zipper, putative tumor suppressor 2 (LOC466256), mRNA Length = 2025 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gagcagctgcgggagaaagct 285 ||||||||||||||||||||| Sbjct: 1576 gagcagctgcgggagaaagct 1596
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggaggccttcgaag 250 |||| ||||||||||||||||| |||||| Sbjct: 4161397 ggcgcaggaggacgaggaggccgtcgaag 4161425
>ref|NM_032429.1| Homo sapiens leucine zipper, putative tumor suppressor 2 (LZTS2), mRNA Length = 2757 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gagcagctgcgggagaaagct 285 ||||||||||||||||||||| Sbjct: 1630 gagcagctgcgggagaaagct 1650
>gb|BC058938.1| Homo sapiens leucine zipper, putative tumor suppressor 2, mRNA (cDNA clone MGC:65190 IMAGE:3913470), complete cds Length = 2802 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gagcagctgcgggagaaagct 285 ||||||||||||||||||||| Sbjct: 1705 gagcagctgcgggagaaagct 1725
>gb|BC005855.2| Homo sapiens leucine zipper, putative tumor suppressor 2, mRNA (cDNA clone IMAGE:2988487), partial cds Length = 1603 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gagcagctgcgggagaaagct 285 ||||||||||||||||||||| Sbjct: 476 gagcagctgcgggagaaagct 496
>emb|AL133215.17| Human DNA sequence from clone RP11-108L7 on chromosome 10 Contains the 3' end of the C10orf6 gene for chromosome 10 open reading frame 6, the SEMA4G gene for sema domain immunoglobulin domain (Ig) transmembrane domain (TM) and short cytoplasmic domain (semaphorin) 4G, the MRPL43 gene for mitochondrial ribosomal protein L43, the C10orf2 gene for chromosome 10 open reading frame 2, the gene for a novel protein (KIAA1813) (LAPSER1), a novel gene, the gene for a novel protein (FLJ23209 FLJ00011), the gene for a novel tricarboxylate carrier domain containing protein (FLJ34185 FLJ35692), the gene for a novel kazal-type serine protease inhibitor domain and immunoglobulin domain containing protein (FKSG28) (FKSG4), the 3' end of a novel gene and six CpG islands, complete sequence Length = 181086 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gagcagctgcgggagaaagct 285 ||||||||||||||||||||| Sbjct: 89543 gagcagctgcgggagaaagct 89563
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggaggccttcgaag 250 |||| ||||||||||||||||| |||||| Sbjct: 2352 ggcgcaggaggacgaggaggccgtcgaag 2380
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggaggccttcgaag 250 |||| ||||||||||||||||| |||||| Sbjct: 39544 ggcgcaggaggacgaggaggccgtcgaag 39572
>emb|AL834338.1|HSM805394 Homo sapiens mRNA; cDNA DKFZp761K1711 (from clone DKFZp761K1711) Length = 2275 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gagcagctgcgggagaaagct 285 ||||||||||||||||||||| Sbjct: 1148 gagcagctgcgggagaaagct 1168
>emb|CR610713.1| full-length cDNA clone CS0DI061YL14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1652 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gagcagctgcgggagaaagct 285 ||||||||||||||||||||| Sbjct: 590 gagcagctgcgggagaaagct 610
>gb|AY029201.1| Homo sapiens LAPSER1 (LAPSER1) mRNA, complete cds Length = 1935 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gagcagctgcgggagaaagct 285 ||||||||||||||||||||| Sbjct: 1486 gagcagctgcgggagaaagct 1506
>gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 222712 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 gggagaaagctagaagccaag 295 ||||||||||||||||||||| Sbjct: 51879 gggagaaagctagaagccaag 51899
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 359 caaaatatgaaattgcattgcaaat 383 ||||||| ||||||||||||||||| Sbjct: 55848 caaaataggaaattgcattgcaaat 55872
>emb|AL442163.5|CNS07ECT Human chromosome 14 DNA sequence BAC R-90P16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167642 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 aaaagcagaaggaaacaaaca 326 ||||||||||||||||||||| Sbjct: 133092 aaaagcagaaggaaacaaaca 133072
>gb|BC006212.2| Homo sapiens leucine zipper, putative tumor suppressor 2, mRNA (cDNA clone MGC:2586 IMAGE:3161855), complete cds Length = 2757 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gagcagctgcgggagaaagct 285 ||||||||||||||||||||| Sbjct: 1630 gagcagctgcgggagaaagct 1650
>emb|AL772390.8| Mouse DNA sequence from clone RP23-446N8 on chromosome 4, complete sequence Length = 59040 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 gaaattggggaaatatgatga 473 ||||||||||||||||||||| Sbjct: 23195 gaaattggggaaatatgatga 23215
>emb|AL928681.5| Mouse DNA sequence from clone RP23-82M15 on chromosome 2, complete sequence Length = 125926 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 352 gcattatcaaaatatgaaatt 372 ||||||||||||||||||||| Sbjct: 91770 gcattatcaaaatatgaaatt 91750
>emb|AL034384.1|HSMTM0 Human chromosome Xq28, cosmid clones 7H3, 14D7, C1230, 11E7, F1096, A12197, 12G8, A09100; complete sequence bases 1..217657 Length = 217657 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gagaaagctagaagccaagca 297 ||||||||||||||||||||| Sbjct: 44959 gagaaagctagaagccaagca 44939
>dbj|AB058716.1| Homo sapiens mRNA for KIAA1813 protein, partial cds Length = 5733 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gagcagctgcgggagaaagct 285 ||||||||||||||||||||| Sbjct: 4624 gagcagctgcgggagaaagct 4644
>gb|AY853707.1| Cyprinid sp. EA-2004 putative pheromone receptor CPpr11 mRNA, complete cds Length = 2559 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 tggggaaatatgatgaaaca 477 |||||||||||||||||||| Sbjct: 1472 tggggaaatatgatgaaaca 1491
>gb|AC104202.13| Mus musculus chromosome 5, clone RP24-558F5, complete sequence Length = 189841 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 attatcaaaatatgaaattgcatt 377 ||||||||||||| |||||||||| Sbjct: 178607 attatcaaaatataaaattgcatt 178630
>ref|XM_467251.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1024 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 527 ggcggaggaggacgaggagg 546
>ref|NM_183780.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2598 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 300 ggcggaggaggacgaggagg 281
>ref|XM_479339.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1383 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 768 ggcggaggaggacgaggagg 787
>ref|XM_524823.1| PREDICTED: Pan troglodytes T-box 15 (LOC469439), mRNA Length = 3447 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gaggagggcggaggaggacg 235 |||||||||||||||||||| Sbjct: 245 gaggagggcggaggaggacg 264
>gb|AC116472.14| Mus musculus chromosome 7, clone RP23-384B23, complete sequence Length = 216191 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 ggagggcggaggaggacgaggagg 241 |||||||||||||||| ||||||| Sbjct: 131034 ggagggcggaggaggaggaggagg 131057
>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24, Map qA7.1, complete sequences Length = 393632 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 gaatcttctgaagatatatc 416 |||||||||||||||||||| Sbjct: 347614 gaatcttctgaagatatatc 347595
>ref|XM_322296.1| Neurospora crassa OR74A hypothetical protein (NCU00211.1) partial mRNA Length = 975 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 ggagggcggaggaggacgaggagg 241 ||||||| |||||||||||||||| Sbjct: 380 ggagggcagaggaggacgaggagg 403
>ref|XM_951503.1| Neurospora crassa OR74A hypothetical protein (NCU00211.1) partial mRNA Length = 975 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 ggagggcggaggaggacgaggagg 241 ||||||| |||||||||||||||| Sbjct: 380 ggagggcagaggaggacgaggagg 403
>ref|XM_864732.1| PREDICTED: Bos taurus similar to A-kinase anchor protein-like protein 8 (Neighbor of A-kinase anchoring protein 95), transcript variant 3 (LOC539700), mRNA Length = 1772 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cggaggaggacgaggaggcc 243 |||||||||||||||||||| Sbjct: 1576 cggaggaggacgaggaggcc 1595
>ref|XM_873990.1| PREDICTED: Bos taurus similar to A-kinase anchor protein-like protein 8 (Neighbor of A-kinase anchoring protein 95), transcript variant 4 (LOC539700), mRNA Length = 1983 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cggaggaggacgaggaggcc 243 |||||||||||||||||||| Sbjct: 1787 cggaggaggacgaggaggcc 1806
>gb|AC124211.2| Mus musculus chromosome X clone CT7-497M13 map qA7.1, complete sequence Length = 114873 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 gaatcttctgaagatatatc 416 |||||||||||||||||||| Sbjct: 15191 gaatcttctgaagatatatc 15210
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gcagaaggaaacaaacattt 329 |||||||||||||||||||| Sbjct: 1401834 gcagaaggaaacaaacattt 1401853
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 ggagggcggaggaggacgaggagg 241 |||| ||||||||||||||||||| Sbjct: 4449655 ggagagcggaggaggacgaggagg 4449678
>gb|AC138116.4| Mus musculus BAC clone RP24-242H5 from chromosome 15, complete sequence Length = 164014 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 atatatcctctgcatgccattcaa 433 ||||||||| |||||||||||||| Sbjct: 60094 atatatcctttgcatgccattcaa 60071
>emb|BX465201.38| Zebrafish DNA sequence from clone DKEY-15F11 in linkage group 14, complete sequence Length = 262688 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 458 tggggaaatatgatgaaacagtta 481 |||||||||||||||||| ||||| Sbjct: 223532 tggggaaatatgatgaaatagtta 223509
>ref|XM_536401.2| PREDICTED: Canis familiaris similar to annexin A11 (predicted) (LOC479259), mRNA Length = 2295 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gaggagggcggaggaggacg 235 |||||||||||||||||||| Sbjct: 1699 gaggagggcggaggaggacg 1680
>emb|AL139420.13| Human DNA sequence from clone RP4-712E4 on chromosome 1p11.1-13.2 Contains the 5' end of the TBX15 gene for T-box 15, a novel gene, the 3' end of the WARS2 gene for tryptophanyl tRNA synthetase 2 (mitochondrial), the 3' end of a novel gene and a CpG island, complete sequence Length = 122122 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gaggagggcggaggaggacg 235 |||||||||||||||||||| Sbjct: 48275 gaggagggcggaggaggacg 48256
>emb|AL122008.28|HSJ799P18 Human DNA sequence from clone RP4-799P18 on chromosome 1q42.2-43 Contains the 3' end of the SLC35F3 gene for solute carrier family 35 member F3, two novel genes and three CpG islands, complete sequence Length = 144407 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 caaaagcagaaggaaacaaa 324 |||||||||||||||||||| Sbjct: 47830 caaaagcagaaggaaacaaa 47849
>gb|AC091204.3| Drosophila melanogaster 3L NOVECTOR RP98-27G13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185825 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 aagcagaaggaaacaaacat 327 |||||||||||||||||||| Sbjct: 143223 aagcagaaggaaacaaacat 143204
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 ggaaatatgatgaaacagtt 480 |||||||||||||||||||| Sbjct: 2466399 ggaaatatgatgaaacagtt 2466380
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 36203 ggcggaggaggacgaggagg 36184
>gb|AC134420.8| Mus musculus chromosome 15, clone RP23-478J5, complete sequence Length = 190455 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 410 atatatcctctgcatgccattcaa 433 ||||||||| |||||||||||||| Sbjct: 173444 atatatcctttgcatgccattcaa 173467
>gb|AC026122.14| Homo sapiens 12 BAC RP11-902D13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184834 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 aagcaaacgatgcaaaagcagaag 316 |||||||| ||||||||||||||| Sbjct: 91603 aagcaaaccatgcaaaagcagaag 91626
>emb|Z22151.1|SDFNBBA S.dysgalactiae fnbB gene Length = 3661 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 gaaatatgatgaaacagttaagga 485 ||||||||||||||||| |||||| Sbjct: 2041 gaaatatgatgaaacaggtaagga 2064
>gb|AC010040.6| Drosophila melanogaster 3L BAC RP98-13E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 159672 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 83432 ggcggaggaggacgaggagg 83451
>gb|AE005946.1| Caulobacter crescentus CB15 section 272 of 359 of the complete genome Length = 11936 Score = 40.1 bits (20), Expect = 7.3 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 85 cgatcggcgcgggcggacggcggcgacc 112 |||||||||||||| ||||||||||||| Sbjct: 2480 cgatcggcgcgggc-gacggcggcgacc 2506
>gb|AC008637.7| Homo sapiens chromosome 5 clone CTB-178M22, complete sequence Length = 100547 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctgctgaactggaatcttct 405 |||||||||||||||||||| Sbjct: 95763 ctgctgaactggaatcttct 95782
>gb|AC096863.5| Genomic sequence for Mus musculus, clone RP23-110F14, from chromosome 17, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 gaggagggcggaggaggacgagga 239 |||||||| ||||||||||||||| Sbjct: 41144 gaggaggggggaggaggacgagga 41167
>ref|NM_139950.1| Drosophila melanogaster CG13670-RA (CG13670), mRNA Length = 801 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 684 ggcggaggaggacgaggagg 703
>ref|XM_693579.1| PREDICTED: Danio rerio similar to potassium channel TSK3 (LOC570138), mRNA Length = 2934 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 1965 ggcggaggaggacgaggagg 1984
>gb|AC099310.1| Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone BACR05G05, complete sequence Length = 163979 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 314 aaggaaacaaacattttgcagctg 337 |||||||||||||||| ||||||| Sbjct: 114082 aaggaaacaaacatttcgcagctg 114105
>gb|DQ241302.1| Xenotropic MuLV-related virus VP42, complete genome Length = 8185 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ggaggaggacgaggaggcct 244 |||||||||||||||||||| Sbjct: 6550 ggaggaggacgaggaggcct 6531
>gb|DQ241301.1| Xenotropic MuLV-related virus VP35, complete genome Length = 8185 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ggaggaggacgaggaggcct 244 |||||||||||||||||||| Sbjct: 6550 ggaggaggacgaggaggcct 6531
>gb|AC011369.4| Homo sapiens chromosome 5 clone CTB-105N12, complete sequence Length = 141529 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctgctgaactggaatcttct 405 |||||||||||||||||||| Sbjct: 33650 ctgctgaactggaatcttct 33669
>dbj|AK135124.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430706K06 product:hypothetical protein, full insert sequence Length = 2000 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ggagggcggaggaggacgaggagg 241 |||||||||||||||| ||||||| Sbjct: 100 ggagggcggaggaggaggaggagg 77
>gb|AY864330.1| Chrysodeixis chalcites nucleopolyhedrovirus, complete genome Length = 149622 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 79601 ggcggaggaggacgaggagg 79582
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cggcgcgggcggacggcggc 108 |||||||||||||||||||| Sbjct: 3392130 cggcgcgggcggacggcggc 3392111
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 27093560 ggcggaggaggacgaggagg 27093541
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 26984182 ggcggaggaggacgaggagg 26984201
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 25590812 ggcggaggaggacgaggagg 25590793
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 ggagggcggaggaggacgaggagg 241 |||| ||||||||||||||||||| Sbjct: 4449770 ggagagcggaggaggacgaggagg 4449793
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 28472904 ggcggaggaggacgaggagg 28472923
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 12245511 ggcggaggaggacgaggagg 12245530
>gb|AC157935.3| Mus musculus chromosome 5, clone RP24-228K8, complete sequence Length = 147812 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 attatcaaaatatgaaattgcatt 377 ||||||||||||| |||||||||| Sbjct: 139808 attatcaaaatataaaattgcatt 139785
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 ggagggcggaggaggacgaggagg 241 |||| ||||||||||||||||||| Sbjct: 54947 ggagagcggaggaggacgaggagg 54970
>gb|AC092996.5| Homo sapiens 3 BAC RP11-692O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132900 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ctgtatgtttcttgaaattg 459 |||||||||||||||||||| Sbjct: 129514 ctgtatgtttcttgaaattg 129495
>emb|BX571831.7| Zebrafish DNA sequence from clone DKEY-266J11 in linkage group 18, complete sequence Length = 195572 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 tggggaaatatgatgaaaca 477 |||||||||||||||||||| Sbjct: 35531 tggggaaatatgatgaaaca 35512
>gb|BT024343.1| Drosophila melanogaster IP09562 full insert cDNA Length = 979 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 757 ggcggaggaggacgaggagg 776
>emb|BX248399.5| Zebrafish DNA sequence from clone CH211-233A1 in linkage group 10, complete sequence Length = 158884 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 aggaggacgaggaggccttc 246 |||||||||||||||||||| Sbjct: 136435 aggaggacgaggaggccttc 136416
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 48660 ggcggaggaggacgaggagg 48679
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 97025 ggcggaggaggacgaggagg 97044
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 41745 ggcggaggaggacgaggagg 41764
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 109129 ggcggaggaggacgaggagg 109110
>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0426D06 Length = 162173 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 70137 ggcggaggaggacgaggagg 70156
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 14257 ggcggaggaggacgaggagg 14238
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 132773 ggcggaggaggacgaggagg 132792
>gb|AE005050.1| Halobacterium sp. NRC-1 section 81 of 170 of the complete genome Length = 16905 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cgggcggacggcggcgacca 113 |||||||||||||||||||| Sbjct: 2334 cgggcggacggcggcgacca 2353
>emb|BX004867.7| Zebrafish DNA sequence from clone CH211-159K2 in linkage group 14, complete sequence Length = 160087 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 458 tggggaaatatgatgaaacagtta 481 |||||||||||||||||| ||||| Sbjct: 125594 tggggaaatatgatgaaatagtta 125617
>ref|XM_556310.1| Anopheles gambiae str. PEST ENSANGP00000029357 (ENSANGG00000024955), partial mRNA Length = 423 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 402 ggcggaggaggacgaggagg 383
>gb|AC145249.3| Macropus eugenii clone ME_KBa-103M1, complete sequence Length = 151329 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gcagaaggaaacaaacattt 329 |||||||||||||||||||| Sbjct: 126144 gcagaaggaaacaaacattt 126163
>dbj|AK102470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094G05, full insert sequence Length = 816 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 185 ggcggaggaggacgaggagg 204
>dbj|AK070488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049C21, full insert sequence Length = 3487 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 417 ggcggaggaggacgaggagg 398
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ggagcacgagggcgaggaga 169 |||||||||||||||||||| Sbjct: 1218804 ggagcacgagggcgaggaga 1218823
>dbj|AK062683.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-H07, full insert sequence Length = 1021 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 527 ggcggaggaggacgaggagg 546
>gb|AE003740.3| Drosophila melanogaster chromosome 3R, section 78 of 118 of the complete sequence Length = 234378 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 aaggaaacaaacattttgcagctg 337 |||||||||||||||| ||||||| Sbjct: 157415 aaggaaacaaacatttcgcagctg 157392
>gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28 of 83 of the complete sequence Length = 287988 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 aagcagaaggaaacaaacat 327 |||||||||||||||||||| Sbjct: 251024 aagcagaaggaaacaaacat 251005
>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete sequence Length = 281917 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcggaggaggacgaggagg 241 |||||||||||||||||||| Sbjct: 270546 ggcggaggaggacgaggagg 270565
>emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 in linkage group 16, complete sequence Length = 166820 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cattatcaaaatatgaaatt 372 |||||||||||||||||||| Sbjct: 100714 cattatcaaaatatgaaatt 100695
>emb|AL807394.9| Mouse DNA sequence from clone RP23-304N5 on chromosome X, complete sequence Length = 161674 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 gaatcttctgaagatatatc 416 |||||||||||||||||||| Sbjct: 29152 gaatcttctgaagatatatc 29171 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,828,458 Number of Sequences: 3902068 Number of extensions: 4828458 Number of successful extensions: 124473 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 123356 Number of HSP's gapped (non-prelim): 1118 length of query: 536 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 513 effective length of database: 17,143,297,704 effective search space: 8794511722152 effective search space used: 8794511722152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
