ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart11d05 |
|---|---|
| Clone Library Name | barley_pub |
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 154 bits (388), Expect = 2e-37 Identities = 76/118 (64%), Positives = 92/118 (77%) Frame = +2 Query: 212 LRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKV 391 LRQYYL I DLQL + K+ NL RL+AQRN+LN++VR+LR GSYVGEVV+ Sbjct: 15 LRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA 74 Query: 392 MGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 M K KVLVKVHPEGK+VVD+D++IDI +TP+ RVALRNDSY LH ILP+ VDPLV+L Sbjct: 75 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSL 132
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 152 bits (383), Expect = 8e-37 Identities = 75/118 (63%), Positives = 92/118 (77%) Frame = +2 Query: 212 LRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKV 391 LRQYYL I +LQL + K+ NL RL+AQRN+LN++VR+LR GSYVGEVV+ Sbjct: 20 LRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA 79 Query: 392 MGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 M K KVLVKVHPEGK+VVD+D++IDI +TP+ RVALRNDSY LH ILP+ VDPLV+L Sbjct: 80 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSL 137
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 152 bits (383), Expect = 8e-37 Identities = 75/118 (63%), Positives = 92/118 (77%) Frame = +2 Query: 212 LRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKV 391 LRQYYL I +LQL + K+ NL RL+AQRN+LN++VR+LR GSYVGEVV+ Sbjct: 20 LRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA 79 Query: 392 MGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 M K KVLVKVHPEGK+VVD+D++IDI +TP+ RVALRNDSY LH ILP+ VDPLV+L Sbjct: 80 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSL 137
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 152 bits (383), Expect = 8e-37 Identities = 75/118 (63%), Positives = 92/118 (77%) Frame = +2 Query: 212 LRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKV 391 LRQYYL I +LQL + K+ NL RL+AQRN+LN++VR+LR GSYVGEVV+ Sbjct: 20 LRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA 79 Query: 392 MGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 M K KVLVKVHPEGK+VVD+D++IDI +TP+ RVALRNDSY LH ILP+ VDPLV+L Sbjct: 80 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSL 137
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 152 bits (383), Expect = 8e-37 Identities = 75/118 (63%), Positives = 92/118 (77%) Frame = +2 Query: 212 LRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKV 391 LRQYYL I +LQL + K+ NL RL+AQRN+LN++VR+LR GSYVGEVV+ Sbjct: 20 LRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA 79 Query: 392 MGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 M K KVLVKVHPEGK+VVD+D++IDI +TP+ RVALRNDSY LH ILP+ VDPLV+L Sbjct: 80 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSL 137
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 152 bits (383), Expect = 8e-37 Identities = 75/118 (63%), Positives = 92/118 (77%) Frame = +2 Query: 212 LRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKV 391 LRQYYL I +LQL + K+ NL RL+AQRN+LN++VR+LR GSYVGEVV+ Sbjct: 20 LRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA 79 Query: 392 MGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 M K KVLVKVHPEGK+VVD+D++IDI +TP+ RVALRNDSY LH ILP+ VDPLV+L Sbjct: 80 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSL 137
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 150 bits (378), Expect = 3e-36 Identities = 77/116 (66%), Positives = 87/116 (75%) Frame = +2 Query: 218 QYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMG 397 QYY Q I D +L I KT NL RLEAQRN LN+RVR+LR PGSYVGEV+K MG Sbjct: 18 QYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMG 77 Query: 398 KSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 K+KVLVKVHPEGKYVVD+ IDI +I P+ RVALRNDSY L ILP+ VDPLV+L Sbjct: 78 KNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSL 133
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 149 bits (377), Expect = 4e-36 Identities = 75/117 (64%), Positives = 90/117 (76%) Frame = +2 Query: 215 RQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVM 394 R YY+Q I +LQL + K NL RL+AQRN+LN++VRMLR GSYVGEVVK M Sbjct: 20 RSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPM 79 Query: 395 GKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 K KVLVKVHPEGK+VVDLD++IDI +TP+ RVALRN+SY LH ILP+ VDPLV+L Sbjct: 80 DKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 136
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 144 bits (363), Expect = 2e-34 Identities = 72/117 (61%), Positives = 89/117 (76%) Frame = +2 Query: 215 RQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVM 394 R YY+ I +LQL + K+ NL RL+AQRN+LN++VRMLR GSYVGEVVK M Sbjct: 17 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPM 76 Query: 395 GKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 K KVLVKVHPEGK+VVDLD+++DI +T + RVALRN+SY LH ILP+ VDPLV+L Sbjct: 77 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSL 133
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 141 bits (356), Expect = 1e-33 Identities = 67/118 (56%), Positives = 88/118 (74%) Frame = +2 Query: 212 LRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKV 391 L+ YY+ I + ++ +R K NL RL+AQRN+LN RVR L+ PGS+VGEVVKV Sbjct: 27 LKNYYIAKIQEKEIVLRDKIENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVKV 86 Query: 392 MGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 MGK KVL+K+ EGKY+VD+D+SI++ +TP RVALRNDSY LH ILP+ +DPLV+L Sbjct: 87 MGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSL 144
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 140 bits (354), Expect = 2e-33 Identities = 66/114 (57%), Positives = 90/114 (78%) Frame = +2 Query: 224 YLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGKS 403 Y I +L++++ K +L RLEAQRN+LN+RVRML+ PGS+V EVVK+MGK+ Sbjct: 6 YCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKN 65 Query: 404 KVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 KVLVKV+PEGK+VVD+D ++DI K+TPSTR AL+++SY LH ILP+ +DPLV+L Sbjct: 66 KVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSL 119
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 126 bits (317), Expect = 4e-29 Identities = 60/118 (50%), Positives = 84/118 (71%) Frame = +2 Query: 212 LRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKV 391 ++ Y+ Q I + +L+IR+KT N+ RLEAQRN LN +VR ++ PGSYVGEV+K+ Sbjct: 19 IKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKI 78 Query: 392 MGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 + KVLVKV PEGKY+VD+ + I++ + S RV LR+DSYMLH +L + DPLV+L Sbjct: 79 VSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSL 136
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 56.2 bits (134), Expect = 6e-08 Identities = 35/113 (30%), Positives = 59/113 (52%) Frame = +2 Query: 221 YYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGK 400 Y + I L+LQ+R + RLE + + L S + LR P ++ G V++V+ Sbjct: 18 YLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQ-------PPAFAGSVIEVLDD 70 Query: 401 SKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 + +V+ + ++VV + ID +K+ P TRVAL + + ILP+ DP V Sbjct: 71 DRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAV 123
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 55.5 bits (132), Expect = 1e-07 Identities = 35/113 (30%), Positives = 59/113 (52%) Frame = +2 Query: 221 YYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGK 400 Y + I L+LQ+R + RLE + + L S + LR P ++ G V++V+ + Sbjct: 21 YLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQ-------PPAFAGTVIEVLDE 73 Query: 401 SKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 + +V+ + ++VV + ID K+ P TRVAL + + ILP+ DP V Sbjct: 74 DRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTV 126
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 52.0 bits (123), Expect = 1e-06 Identities = 33/113 (29%), Positives = 57/113 (50%) Frame = +2 Query: 221 YYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGK 400 Y + I L+LQ+R + RLE + + L S + LR P ++ G V++V+ Sbjct: 21 YLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQ-------PPAFAGTVIEVLDD 73 Query: 401 SKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 + +V+ + ++VV + I+ K+ P RVAL + + +LPS DP V Sbjct: 74 DRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTV 126
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 51.2 bits (121), Expect = 2e-06 Identities = 35/115 (30%), Positives = 49/115 (42%) Frame = +2 Query: 215 RQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVM 394 R LQ L+ + L L Q +L + G VGEV+K + Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64 Query: 395 GKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 + K +VK +YVV +D +K+ P TRVAL + + LP VDPLV Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLV 119
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 51.2 bits (121), Expect = 2e-06 Identities = 35/115 (30%), Positives = 49/115 (42%) Frame = +2 Query: 215 RQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVM 394 R LQ L+ + L L Q +L + G VGEV+K + Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64 Query: 395 GKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 + K +VK +YVV +D +K+ P TRVAL + + LP VDPLV Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLV 119
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 51.2 bits (121), Expect = 2e-06 Identities = 35/115 (30%), Positives = 49/115 (42%) Frame = +2 Query: 215 RQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVM 394 R LQ L+ + L L Q +L + G VGEV+K + Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64 Query: 395 GKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 + K +VK +YVV +D +K+ P TRVAL + + LP VDPLV Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLV 119
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 50.8 bits (120), Expect = 3e-06 Identities = 32/110 (29%), Positives = 54/110 (49%) Frame = +2 Query: 230 QHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGKSKV 409 + I L+LQ+RT LEA + L + LR P ++ G V++V+ + Sbjct: 22 RRIRQLELQVRT-------LEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDERA 74 Query: 410 LVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 +V+ + ++VV + I+ K+ P RVAL + + +LPS DP V Sbjct: 75 IVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSV 124
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 48.5 bits (114), Expect = 1e-05 Identities = 28/102 (27%), Positives = 50/102 (49%) Frame = +2 Query: 254 QIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGKSKVLVKVHPEG 433 Q++ + N+ LE + + ++ L+ G +GEV+K + + K +VK Sbjct: 73 QLKQRRQNIRDLEKLYDKTENDIKALQSI-------GQLIGEVMKELSEEKYIVKASSGP 125 Query: 434 KYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 +Y+V + S+D +K+ RV L + + ILP DPLV Sbjct: 126 RYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLV 167
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 47.4 bits (111), Expect = 3e-05 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 7/121 (5%) Frame = +2 Query: 218 QYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSR-------VRMLRXXXXXXXXPGSYVG 376 QY L+ + L+ RLE ++ + S VR LR P VG Sbjct: 7 QYLLEKLKKLEEDYYKLRELYRRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVG 66 Query: 377 EVVKVMGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPL 556 V ++ +V+VK K+VV+ + I+ ++ P RVAL + + +LP+ DP+ Sbjct: 67 VVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPM 126 Query: 557 V 559 V Sbjct: 127 V 127
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 47.0 bits (110), Expect = 4e-05 Identities = 29/106 (27%), Positives = 50/106 (47%) Frame = +2 Query: 242 DLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGKSKVLVKV 421 +L +IR + +E +R L+ V+ LR P + V +V+ +V VK Sbjct: 32 NLMWKIRKLEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKS 91 Query: 422 HPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 +V++ ID ++ P RVAL ++ + +LPS DP+V Sbjct: 92 TTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVV 137
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 44.3 bits (103), Expect = 2e-04 Identities = 31/115 (26%), Positives = 46/115 (40%) Frame = +2 Query: 215 RQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVM 394 R L+ LQ R L L DL + G +GEV+K + Sbjct: 4 RDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQL 63 Query: 395 GKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 + +VK +YVV ++D + + RV+L + + ILP VDPLV Sbjct: 64 DSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLV 118
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 42.7 bits (99), Expect = 7e-04 Identities = 20/54 (37%), Positives = 31/54 (57%) Frame = +2 Query: 404 KVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 + L+ V K+VVDL +S+ T I RV + + Y +HL LP+ +DP V + Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTM 165
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 42.7 bits (99), Expect = 7e-04 Identities = 25/66 (37%), Positives = 36/66 (54%) Frame = +2 Query: 362 GSYVGEVVKVMGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPS 541 G VGEV+K + + K +VK +YVV SI+ ++ TRV+L + + LP Sbjct: 71 GQIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPR 130 Query: 542 XVDPLV 559 VDPLV Sbjct: 131 EVDPLV 136
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/91 (23%), Positives = 44/91 (48%) Frame = +2 Query: 287 LEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDLDESID 466 LE Q+ +R L+ +G V+ V+ +++V+ +++V++ + ID Sbjct: 55 LENQKIKYEREIRKLQSELDRMKTSPLIIGTVIDVIKNDRIIVRSSNGPQFLVNVSQYID 114 Query: 467 ITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 K+ P +VAL + + ++PS +P V Sbjct: 115 EKKLLPGAKVALNQHTLAIAEVIPSTEEPFV 145
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/91 (23%), Positives = 44/91 (48%) Frame = +2 Query: 287 LEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDLDESID 466 LE Q+ +R L+ +G V+ V+ +++V+ +++V++ + ID Sbjct: 55 LENQKIKYEREIRKLQSELDRMKTSPLIIGTVIDVIKNDRIIVRSSNGPQFLVNVSQYID 114 Query: 467 ITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 K+ P +VAL + + ++PS +P V Sbjct: 115 EKKLLPGAKVALNQHTLAIAEVIPSTEEPFV 145
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = +2 Query: 404 KVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 K ++ V K+VVDL + + T I RV + + Y +H+ LP +DP V + Sbjct: 109 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTM 162
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = +2 Query: 404 KVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 K ++ V K+VVDL + + T I RV + + Y +H+ LP +DP V + Sbjct: 109 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTM 162
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = +2 Query: 404 KVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 K ++ V K+VVDL + + T I RV + + Y +H+ LP +DP V + Sbjct: 109 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTM 162
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = +2 Query: 404 KVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 K ++ V K+VVDL + + T I RV + + Y +H+ LP +DP V + Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTM 163
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 38.9 bits (89), Expect = 0.010 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 10/119 (8%) Frame = +2 Query: 233 HIHDLQLQIRTKTHNLNRLEAQRND---LNSRVRM-------LRXXXXXXXXPGSYVGEV 382 H L+++ R + LE +R++ L +R LR P VG V Sbjct: 47 HEEKLRIEARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTV 106 Query: 383 VKVMGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 +++ +V+VK K+V ++ ++D ++ P VAL S + +LPS D V Sbjct: 107 EEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRV 165
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 36.6 bits (83), Expect = 0.051 Identities = 23/103 (22%), Positives = 43/103 (41%) Frame = +2 Query: 251 LQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGKSKVLVKVHPE 430 ++IR + L ++ L + + P V++V+ ++V+VK Sbjct: 23 VEIRILKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTG 82 Query: 431 GKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 +V++ +D + P VAL N + +LP DPLV Sbjct: 83 PNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLV 125
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 35.0 bits (79), Expect = 0.15 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = +2 Query: 401 SKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 +K ++ V K+VV L + + T I RV + + Y + + LP +DP V + Sbjct: 102 AKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 35.0 bits (79), Expect = 0.15 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = +2 Query: 401 SKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 +K ++ V K+VV L + + T I RV + + Y + + LP +DP V + Sbjct: 102 AKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 35.0 bits (79), Expect = 0.15 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = +2 Query: 401 SKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 +K ++ V K+VV L + + T I RV + + Y + + LP +DP V + Sbjct: 102 AKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 35.0 bits (79), Expect = 0.15 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = +2 Query: 401 SKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 +K ++ V K+VV L + + T I RV + + Y + + LP +DP V + Sbjct: 101 AKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 155
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 34.3 bits (77), Expect = 0.25 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +2 Query: 398 KSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 K+ ++ + K+VV L E + T I RV + Y + L LP +DP V + Sbjct: 112 KNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTM 167
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 34.3 bits (77), Expect = 0.25 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +2 Query: 401 SKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLVNL 565 +K ++ + K+VV L E + T I RV + Y + L LP +DP V + Sbjct: 143 AKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTM 197
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 33.1 bits (74), Expect = 0.56 Identities = 24/116 (20%), Positives = 44/116 (37%) Frame = +2 Query: 212 LRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKV 391 L Y +H + +R + L + L + + P V+ + Sbjct: 5 LDSYRAKHYNSDDPIVRLLEEKIESLTKELEKLRQDLNWYKGELEKLLAPPYIEAIVLDI 64 Query: 392 MGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 + KV+V+ +V++ +IDI K+ P + VAL + +LP D V Sbjct: 65 LPDGKVIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYV 120
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 33.1 bits (74), Expect = 0.56 Identities = 23/101 (22%), Positives = 39/101 (38%) Frame = +2 Query: 257 IRTKTHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGSYVGEVVKVMGKSKVLVKVHPEGK 436 +R + L+ + +L + + P V+ V+ +VLV+ Sbjct: 20 VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPN 79 Query: 437 YVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVDPLV 559 VV++ ID I P VAL + +LP DP+V Sbjct: 80 LVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIV 120
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 32.3 bits (72), Expect = 0.96 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +2 Query: 371 VGEVVKVMGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVD 550 +G+ ++ + ++ +V+ YVV + ++D K+ PS+ VAL S L ILP D Sbjct: 90 IGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEAD 149
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 30.4 bits (67), Expect = 3.6 Identities = 17/65 (26%), Positives = 33/65 (50%) Frame = +2 Query: 371 VGEVVKVMGKSKVLVKVHPEGKYVVDLDESIDITKITPSTRVALRNDSYMLHLILPSXVD 550 +G+ ++ + ++ +V YVV + ++D + PS VAL+ S L ILP D Sbjct: 58 IGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEAD 117 Query: 551 PLVNL 565 +++ Sbjct: 118 SSISM 122 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,840,859 Number of Sequences: 219361 Number of extensions: 724951 Number of successful extensions: 2791 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 2691 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2787 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
