ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart11d05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475120.1| Triticum aestivum 26S proteasome ATPase subunit mRNA, partial cds Length = 864 Score = 553 bits (279), Expect = e-154 Identities = 320/330 (96%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 240 acgacctgcagctccag-atccgg-accaag-acgcacaacctcaaccgcctcgaggccc 296 ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| Sbjct: 5 acgacctgcagctccagnatccggnaccaagnacgcacaacctcaaccgcctcgaggccc 64 Query: 297 agcgcaacgacctcaactctcgcgttagaatgctccgggaagagttgcagctgcttcaag 356 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 65 agcgcaacgacctcaactctcgagttagaatgctccgggaagagttgcagctgcttcaag 124 Query: 357 aaccgggctcatatgttggcgaggttgtgaaggttatgggcaagtcaaaggttctagtca 416 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 125 aaccgggctcatatgttggcgaggttgtgaaggtcatgggcaagtcaaaggttctagtga 184 Query: 417 aggttcatccagaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaaga 476 ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| Sbjct: 185 aggttcatccagaaggcaaatatgttgtagatcttgataaaagtattgatattacaaaga 244 Query: 477 taaccccttcaacaagagttgctcttcggaacgacagctacatgcttcaccttatcctgc 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 taaccccttcaacaagagttgctcttcggaacgacagctacatgcttcaccttatcctgc 304 Query: 537 ccagcanagtcgatccactggttaatctta 566 |||||| ||||||||||||||||||||||| Sbjct: 305 ccagcaaagtcgatccactggttaatctta 334
>ref|XM_507461.1| PREDICTED Oryza sativa (japonica cultivar-group), P0544H11.38 mRNA Length = 1653 Score = 422 bits (213), Expect = e-115 Identities = 326/364 (89%) Strand = Plus / Plus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 215 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgtt 322 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 216 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactcccgagtt 275 Query: 323 agaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggtt 382 ||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 276 agaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgaggtg 335 Query: 383 gtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 442 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 336 gtgaaggtcatgggtaaatcaaaggttctagtgaaggtacatccagaaggcaaatatgtg 395 Query: 443 gttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctctt 502 || ||| ||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 396 gtggatattgataaaagcattgatattacaaagatcacaccttcaacaagagttgctctt 455 Query: 503 cggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggttaat 562 || || || ||||| |||||||| | |||||||| |||| ||| ||||| |||| ||| Sbjct: 456 cgaaatgatagctatatgcttcatttgatcctgccaagcaaagttgatccgttggtcaat 515 Query: 563 ctta 566 |||| Sbjct: 516 ctta 519
>ref|XM_464561.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1653 Score = 422 bits (213), Expect = e-115 Identities = 326/364 (89%) Strand = Plus / Plus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 215 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgtt 322 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 216 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactcccgagtt 275 Query: 323 agaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggtt 382 ||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 276 agaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgaggtg 335 Query: 383 gtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 442 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 336 gtgaaggtcatgggtaaatcaaaggttctagtgaaggtacatccagaaggcaaatatgtg 395 Query: 443 gttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctctt 502 || ||| ||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 396 gtggatattgataaaagcattgatattacaaagatcacaccttcaacaagagttgctctt 455 Query: 503 cggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggttaat 562 || || || ||||| |||||||| | |||||||| |||| ||| ||||| |||| ||| Sbjct: 456 cgaaatgatagctatatgcttcatttgatcctgccaagcaaagttgatccgttggtcaat 515 Query: 563 ctta 566 |||| Sbjct: 516 ctta 519
>ref|XM_506757.2| PREDICTED Oryza sativa (japonica cultivar-group), P0544H11.38 mRNA Length = 1771 Score = 422 bits (213), Expect = e-115 Identities = 326/364 (89%) Strand = Plus / Plus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 315 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgtt 322 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 316 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactcccgagtt 375 Query: 323 agaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggtt 382 ||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 376 agaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgaggtg 435 Query: 383 gtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 442 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 436 gtgaaggtcatgggtaaatcaaaggttctagtgaaggtacatccagaaggcaaatatgtg 495 Query: 443 gttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctctt 502 || ||| ||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 496 gtggatattgataaaagcattgatattacaaagatcacaccttcaacaagagttgctctt 555 Query: 503 cggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggttaat 562 || || || ||||| |||||||| | |||||||| |||| ||| ||||| |||| ||| Sbjct: 556 cgaaatgatagctatatgcttcatttgatcctgccaagcaaagttgatccgttggtcaat 615 Query: 563 ctta 566 |||| Sbjct: 616 ctta 619
>dbj|AK106217.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H03, full insert sequence Length = 1653 Score = 422 bits (213), Expect = e-115 Identities = 326/364 (89%) Strand = Plus / Plus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 215 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgtt 322 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 216 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactcccgagtt 275 Query: 323 agaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggtt 382 ||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 276 agaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgaggtg 335 Query: 383 gtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 442 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 336 gtgaaggtcatgggtaaatcaaaggttctagtgaaggtacatccagaaggcaaatatgtg 395 Query: 443 gttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctctt 502 || ||| ||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 396 gtggatattgataaaagcattgatattacaaagatcacaccttcaacaagagttgctctt 455 Query: 503 cggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggttaat 562 || || || ||||| |||||||| | |||||||| |||| ||| ||||| |||| ||| Sbjct: 456 cgaaatgatagctatatgcttcatttgatcctgccaagcaaagttgatccgttggtcaat 515 Query: 563 ctta 566 |||| Sbjct: 516 ctta 519
>dbj|AK102286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089I16, full insert sequence Length = 1772 Score = 422 bits (213), Expect = e-115 Identities = 326/364 (89%) Strand = Plus / Plus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 315 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgtt 322 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 316 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactcccgagtt 375 Query: 323 agaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggtt 382 ||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 376 agaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgaggtg 435 Query: 383 gtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 442 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 436 gtgaaggtcatgggtaaatcaaaggttctagtgaaggtacatccagaaggcaaatatgtg 495 Query: 443 gttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctctt 502 || ||| ||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 496 gtggatattgataaaagcattgatattacaaagatcacaccttcaacaagagttgctctt 555 Query: 503 cggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggttaat 562 || || || ||||| |||||||| | |||||||| |||| ||| ||||| |||| ||| Sbjct: 556 cgaaatgatagctatatgcttcatttgatcctgccaagcaaagttgatccgttggtcaat 615 Query: 563 ctta 566 |||| Sbjct: 616 ctta 619
>dbj|AK061762.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B03, full insert sequence Length = 1653 Score = 422 bits (213), Expect = e-115 Identities = 326/364 (89%) Strand = Plus / Plus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 215 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgtt 322 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 216 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactcccgagtt 275 Query: 323 agaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggtt 382 ||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 276 agaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgaggtg 335 Query: 383 gtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 442 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 336 gtgaaggtcatgggtaaatcaaaggttctagtgaaggtacatccagaaggcaaatatgtg 395 Query: 443 gttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctctt 502 || ||| ||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 396 gtggatattgataaaagcattgatattacaaagatcacaccttcaacaagagttgctctt 455 Query: 503 cggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggttaat 562 || || || ||||| |||||||| | |||||||| |||| ||| ||||| |||| ||| Sbjct: 456 cgaaatgatagctatatgcttcatttgatcctgccaagcaaagttgatccgttggtcaat 515 Query: 563 ctta 566 |||| Sbjct: 516 ctta 519
>dbj|AB052887.1| Oryza sativa mRNA for 26S proteasome ATPase subunit Rpt6, complete cds Length = 1516 Score = 422 bits (213), Expect = e-115 Identities = 326/364 (89%) Strand = Plus / Plus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 197 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgtt 322 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 198 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactcccgagtt 257 Query: 323 agaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggtt 382 ||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 258 agaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgaggtg 317 Query: 383 gtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 442 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 318 gtgaaggtcatgggtaaatcaaaggttctagtgaaggtacatccagaaggcaaatatgtg 377 Query: 443 gttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctctt 502 || ||| ||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 378 gtggatattgataaaagcattgatattacaaagatcacaccttcaacaagagttgctctt 437 Query: 503 cggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggttaat 562 || || || ||||| |||||||| | |||||||| |||| ||| ||||| |||| ||| Sbjct: 438 cgaaatgatagctatatgcttcatttgatcctgccaagcaaagttgatccgttggtcaat 497 Query: 563 ctta 566 |||| Sbjct: 498 ctta 501
>dbj|AB033537.1| Oryza sativa (japonica cultivar-group) OsRPT6 mRNA for 26S proteasome regulatory particle triple-A ATPase subunit6, complete cds Length = 1625 Score = 422 bits (213), Expect = e-115 Identities = 326/364 (89%) Strand = Plus / Plus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 308 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgtt 322 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 309 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactcccgagtt 368 Query: 323 agaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggtt 382 ||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 369 agaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgaggtg 428 Query: 383 gtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 442 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 429 gtgaaggtcatgggtaaatcaaaggttctagtgaaggtacatccagaaggcaaatatgtg 488 Query: 443 gttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctctt 502 || ||| ||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 489 gtggatattgataaaagcattgatattacaaagatcacaccttcaacaagagttgctctt 548 Query: 503 cggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggttaat 562 || || || ||||| |||||||| | |||||||| |||| ||| ||||| |||| ||| Sbjct: 549 cgaaatgatagctatatgcttcatttgatcctgccaagcaaagttgatccgttggtcaat 608 Query: 563 ctta 566 |||| Sbjct: 609 ctta 612
>gb|AY011124.1| Dactylis glomerata 26S proteasome RPT6a subunit (DGRPT6a) mRNA, complete cds Length = 1553 Score = 391 bits (197), Expect = e-105 Identities = 322/364 (88%) Strand = Plus / Plus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 265 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgtt 322 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 266 accaagacccacaacctcaaccgcctcgaggcccagcgcaacgacctcaactccaaagtt 325 Query: 323 agaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggtt 382 ||| ||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 326 agagcactcagggaagagctgcagttgcttcaagaacctggctcttatgttggtgaggtg 385 Query: 383 gtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 442 |||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 gtgaaggtcatgggtaaatcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 445 Query: 443 gttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctctt 502 || ||| | || | || || ||||||||||| || || ||||||||||||||||||||| Sbjct: 446 gtagatatcgacaagagcatcgatattacaaaaatcacaccttcaacaagagttgctctt 505 Query: 503 cggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggttaat 562 || || || ||||||||||| || | |||||||| |||| ||| |||||| |||| ||| Sbjct: 506 cgaaatgatagctacatgctccatttgatcctgccaagcaaagttgatccattggtcaat 565 Query: 563 ctta 566 |||| Sbjct: 566 ctta 569 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 106 gatggcggcggtggcgatggacatcgcgaagccc 139 ||||||| ||||||||||||||||| |||||||| Sbjct: 124 gatggcgacggtggcgatggacatctcgaagccc 157
>gb|AY103724.1| Zea mays PCO078380 mRNA sequence Length = 1655 Score = 361 bits (182), Expect = 2e-96 Identities = 322/369 (87%) Strand = Plus / Plus Query: 196 cggcggcggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctcca 255 |||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 120 cggcgggggcgaggggctgcggcagtactacctgcagcacatccatgacctgcagctcca 179 Query: 256 gatccggaccaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactc 315 ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gatccggcagaagacccataacctcaaccgcctcgaggcccagcgcaacgacctcaactc 239 Query: 316 tcgcgttagaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttgg 375 || |||||||||||| |||||||||||||| |||||||||| || |||||||||||||| Sbjct: 240 ccgagttagaatgctcagggaagagttgcagttgcttcaagagcctggctcatatgttgg 299 Query: 376 cgaggttgtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaa 435 ||||| |||||||| ||||| || ||||||||||| || ||||| ||||| |||||||| Sbjct: 300 tgaggtggtgaaggtcatggggaaatcaaaggttctggtgaaggtacatcccgaaggcaa 359 Query: 436 atatgtcgttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagt 495 |||||| || ||| | ||| | || |||||||| || ||||| || |||||||||||||| Sbjct: 360 atatgtggtggatatagataagagcattgatatcactaagatcacaccttcaacaagagt 419 Query: 496 tgctcttcggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccact 555 |||||||||||| ||||| || ||||| || || ||||| || |||| ||| |||||| | Sbjct: 420 tgctcttcggaatgacagttatatgctccatctgatcctaccaagcaaagttgatccatt 479 Query: 556 ggttaatct 564 ||| ||||| Sbjct: 480 ggtcaatct 488 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 106 gatggcggcggtggcgatggacatcgcgaagccc 139 ||||||| ||||||||||||||||| |||||||| Sbjct: 33 gatggcgacggtggcgatggacatctcgaagccc 66
>gb|BT009143.1| Triticum aestivum clone wl1n.pk0053.g3:fis, full insert mRNA sequence Length = 1450 Score = 353 bits (178), Expect = 4e-94 Identities = 341/395 (86%), Gaps = 3/395 (0%) Strand = Plus / Plus Query: 173 gcggcgtcggccaagggcagggccggcggcgggg---aggggctgcgccagtactacctg 229 |||||| |||||||||| ||| |||||| |||| |||||||||| |||||||||||| Sbjct: 94 gcggcggcggccaaggggaggagcggcggagggggcgaggggctgcggcagtactacctg 153 Query: 230 cagcacatccacgacctgcagctccagatccggaccaagacgcacaacctcaaccgcctc 289 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 154 cagcacatccacgacctgcagctccagatccggcagaagacccacaacctcaaccgtctc 213 Query: 290 gaggcccagcgcaacgacctcaactctcgcgttagaatgctccgggaagagttgcagctg 349 |||||||||||||| ||||||||||| || |||||||||||| |||||||||||||| || Sbjct: 214 gaggcccagcgcaatgacctcaactcccgagttagaatgctcagggaagagttgcagttg 273 Query: 350 cttcaagaaccgggctcatatgttggcgaggttgtgaaggttatgggcaagtcaaaggtt 409 |||||||| || |||||||||||||| ||||| |||||||| ||||| || ||||||||| Sbjct: 274 cttcaagagcctggctcatatgttggtgaggtggtgaaggtcatggggaaatcaaaggtt 333 Query: 410 ctagtcaaggttcatccagaaggcaaatatgtcgttgatcttgatgaaagtattgatatt 469 || || ||||| || || |||||||||||||| |||||| | ||| | || |||||||| Sbjct: 334 ctggtgaaggtacaccccgaaggcaaatatgttgttgatatagataagagcattgatatc 393 Query: 470 acaaagataaccccttcaacaagagttgctcttcggaacgacagctacatgcttcacctt 529 |||||||| || |||||||||||||| |||||||| || || ||||| ||||| || || Sbjct: 394 acaaagatcacaccttcaacaagagtcgctcttcgtaatgatagctatatgctccatctg 453 Query: 530 atcctgcccagcanagtcgatccactggttaatct 564 ||||| || |||| ||| |||||| |||| ||||| Sbjct: 454 atcctaccaagcaaagttgatccattggtcaatct 488 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 106 gatggcggcggtggcgatggacatcgcgaagccc 139 ||||||| ||||||||||||||||| |||||||| Sbjct: 33 gatggcgacggtggcgatggacatctcgaagccc 66
>dbj|AK065619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M24, full insert sequence Length = 1520 Score = 323 bits (163), Expect = 4e-85 Identities = 312/360 (86%), Gaps = 4/360 (1%) Strand = Plus / Plus Query: 209 gggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccggaccaag 268 |||||||| | |||||||| | || ||||||||||||||||||||||||||| ||||| Sbjct: 155 gggctgcggccgtactaccagtcgcgcatccacgacctgcagctccagatccg--ccaag 212 Query: 269 --acgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgttagaa 326 ||| ||||||||| |||||||||||||||||| |||| |||||| || | |||| || Sbjct: 213 ggacggacaacctcagccgcctcgaggcccagcggaacgtcctcaattcccaagttataa 272 Query: 327 tgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggttgtga 386 ||| ||||||||||| || |||| || |||||||||||||||||||| |||||||| | Sbjct: 273 cgctgggggaagagttgaaggtgctccatgaaccgggctcatatgttggtgaggttgtca 332 Query: 387 aggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtcgttg 446 |||||||||||||||| ||||||||||| ||||| || |||||||| |||||||| |||| Sbjct: 333 aggttatgggcaagtccaaggttctagtgaaggtgcacccagaaggaaaatatgttgttg 392 Query: 447 atcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctcttcgga 506 || | ||| |||||||||||||||||||| | | ||||||||||||||||||||||| | Sbjct: 393 atgtcgataaaagtattgatattacaaagctctcgccttcaacaagagttgctcttcgaa 452 Query: 507 acgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggttaatctta 566 | |||||||| |||||||| |||||||||||||||| ||| |||||| |||||||||||| Sbjct: 453 atgacagctatatgcttcatcttatcctgcccagcaaagttgatccattggttaatctta 512
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 192 bits (97), Expect = 9e-46 Identities = 109/113 (96%) Strand = Plus / Minus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5923400 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 5923341 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactc 315 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5923340 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactc 5923288 Score = 133 bits (67), Expect = 7e-28 Identities = 129/150 (86%) Strand = Plus / Minus Query: 417 aggttcatccagaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaaga 476 |||| |||||||||||||||||||| || ||| ||||| |||| |||||||||||||||| Sbjct: 5921379 aggtacatccagaaggcaaatatgtggtggatattgataaaagcattgatattacaaaga 5921320 Query: 477 taaccccttcaacaagagttgctcttcggaacgacagctacatgcttcaccttatcctgc 536 | || ||||||||||||||||||||||| || || ||||| |||||||| | ||||||| Sbjct: 5921319 tcacaccttcaacaagagttgctcttcgaaatgatagctatatgcttcatttgatcctgc 5921260 Query: 537 ccagcanagtcgatccactggttaatctta 566 | |||| ||| ||||| |||| ||||||| Sbjct: 5921259 caagcaaagttgatccgttggtcaatctta 5921230 Score = 113 bits (57), Expect = 6e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 320 gttagaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgag 379 |||||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||| Sbjct: 5922136 gttagaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgag 5922077 Query: 380 gttgtgaaggttatgggcaagtcaaaggttctagtcaaggt 420 || |||||||| ||||| || |||||||||||||| ||||| Sbjct: 5922076 gtggtgaaggtcatgggtaaatcaaaggttctagtgaaggt 5922036 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cttccggcgagcgtcgacgac 166 ||||||||||||||||||||| Sbjct: 29851857 cttccggcgagcgtcgacgac 29851877
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 192 bits (97), Expect = 9e-46 Identities = 109/113 (96%) Strand = Plus / Minus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101621 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 101562 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactc 315 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101561 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactc 101509 Score = 133 bits (67), Expect = 7e-28 Identities = 129/150 (86%) Strand = Plus / Minus Query: 417 aggttcatccagaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaaga 476 |||| |||||||||||||||||||| || ||| ||||| |||| |||||||||||||||| Sbjct: 99600 aggtacatccagaaggcaaatatgtggtggatattgataaaagcattgatattacaaaga 99541 Query: 477 taaccccttcaacaagagttgctcttcggaacgacagctacatgcttcaccttatcctgc 536 | || ||||||||||||||||||||||| || || ||||| |||||||| | ||||||| Sbjct: 99540 tcacaccttcaacaagagttgctcttcgaaatgatagctatatgcttcatttgatcctgc 99481 Query: 537 ccagcanagtcgatccactggttaatctta 566 | |||| ||| ||||| |||| ||||||| Sbjct: 99480 caagcaaagttgatccgttggtcaatctta 99451 Score = 113 bits (57), Expect = 6e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 320 gttagaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgag 379 |||||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||| Sbjct: 100357 gttagaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgag 100298 Query: 380 gttgtgaaggttatgggcaagtcaaaggttctagtcaaggt 420 || |||||||| ||||| || |||||||||||||| ||||| Sbjct: 100297 gtggtgaaggtcatgggtaaatcaaaggttctagtgaaggt 100257
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 192 bits (97), Expect = 9e-46 Identities = 109/113 (96%) Strand = Plus / Minus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153202 ggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccgg 153143 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactc 315 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153142 cagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactc 153090 Score = 133 bits (67), Expect = 7e-28 Identities = 129/150 (86%) Strand = Plus / Minus Query: 417 aggttcatccagaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaaga 476 |||| |||||||||||||||||||| || ||| ||||| |||| |||||||||||||||| Sbjct: 151181 aggtacatccagaaggcaaatatgtggtggatattgataaaagcattgatattacaaaga 151122 Query: 477 taaccccttcaacaagagttgctcttcggaacgacagctacatgcttcaccttatcctgc 536 | || ||||||||||||||||||||||| || || ||||| |||||||| | ||||||| Sbjct: 151121 tcacaccttcaacaagagttgctcttcgaaatgatagctatatgcttcatttgatcctgc 151062 Query: 537 ccagcanagtcgatccactggttaatctta 566 | |||| ||| ||||| |||| ||||||| Sbjct: 151061 caagcaaagttgatccgttggtcaatctta 151032 Score = 113 bits (57), Expect = 6e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 320 gttagaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgag 379 |||||||||||| |||||||| ||||| ||||||||||||| ||||| |||||||| ||| Sbjct: 151938 gttagaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgag 151879 Query: 380 gttgtgaaggttatgggcaagtcaaaggttctagtcaaggt 420 || |||||||| ||||| || |||||||||||||| ||||| Sbjct: 151878 gtggtgaaggtcatgggtaaatcaaaggttctagtgaaggt 151838
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 157 bits (79), Expect = 5e-35 Identities = 126/142 (88%) Strand = Plus / Plus Query: 425 ccagaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaagataacccct 484 |||||||| |||||||| |||||| | ||| |||||||||||||||||||| | | ||| Sbjct: 23302680 ccagaaggaaaatatgttgttgatgtcgataaaagtattgatattacaaagctctcgcct 23302739 Query: 485 tcaacaagagttgctcttcggaacgacagctacatgcttcaccttatcctgcccagcana 544 |||||||||||||||||||| || |||||||| |||||||| |||||||||||||||| | Sbjct: 23302740 tcaacaagagttgctcttcgaaatgacagctatatgcttcatcttatcctgcccagcaaa 23302799 Query: 545 gtcgatccactggttaatctta 566 || |||||| |||||||||||| Sbjct: 23302800 gttgatccattggttaatctta 23302821 Score = 111 bits (56), Expect = 3e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 333 gggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggttgtgaaggtta 392 ||||||||||| || |||| || |||||||||||||||||||| |||||||| ||||||| Sbjct: 23302114 gggaagagttgaaggtgctccatgaaccgggctcatatgttggtgaggttgtcaaggtta 23302173 Query: 393 tgggcaagtcaaaggttctagtcaaggt 420 |||||||||| ||||||||||| ||||| Sbjct: 23302174 tgggcaagtccaaggttctagtgaaggt 23302201 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/106 (86%), Gaps = 4/106 (3%) Strand = Plus / Plus Query: 209 gggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccggaccaag 268 |||||||| | |||||||| | || ||||||||||||||||||||||||||| ||||| Sbjct: 23301680 gggctgcggccgtactaccagtcgcgcatccacgacctgcagctccagatccg--ccaag 23301737 Query: 269 --acgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaa 312 ||| ||||||||| |||||||||||||||||| |||| |||||| Sbjct: 23301738 ggacggacaacctcagccgcctcgaggcccagcggaacgtcctcaa 23301783 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 332 cgggaagagttgcagctgcttcaaga 357 |||||||||||||||||||||||||| Sbjct: 23278728 cgggaagagttgcagctgcttcaaga 23278753
>dbj|AP003612.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0457B11 Length = 144015 Score = 157 bits (79), Expect = 5e-35 Identities = 126/142 (88%) Strand = Plus / Plus Query: 425 ccagaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaagataacccct 484 |||||||| |||||||| |||||| | ||| |||||||||||||||||||| | | ||| Sbjct: 21653 ccagaaggaaaatatgttgttgatgtcgataaaagtattgatattacaaagctctcgcct 21712 Query: 485 tcaacaagagttgctcttcggaacgacagctacatgcttcaccttatcctgcccagcana 544 |||||||||||||||||||| || |||||||| |||||||| |||||||||||||||| | Sbjct: 21713 tcaacaagagttgctcttcgaaatgacagctatatgcttcatcttatcctgcccagcaaa 21772 Query: 545 gtcgatccactggttaatctta 566 || |||||| |||||||||||| Sbjct: 21773 gttgatccattggttaatctta 21794 Score = 111 bits (56), Expect = 3e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 333 gggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggttgtgaaggtta 392 ||||||||||| || |||| || |||||||||||||||||||| |||||||| ||||||| Sbjct: 21087 gggaagagttgaaggtgctccatgaaccgggctcatatgttggtgaggttgtcaaggtta 21146 Query: 393 tgggcaagtcaaaggttctagtcaaggt 420 |||||||||| ||||||||||| ||||| Sbjct: 21147 tgggcaagtccaaggttctagtgaaggt 21174 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/106 (86%), Gaps = 4/106 (3%) Strand = Plus / Plus Query: 209 gggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccggaccaag 268 |||||||| | |||||||| | || ||||||||||||||||||||||||||| ||||| Sbjct: 20653 gggctgcggccgtactaccagtcgcgcatccacgacctgcagctccagatccg--ccaag 20710 Query: 269 --acgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaa 312 ||| ||||||||| |||||||||||||||||| |||| |||||| Sbjct: 20711 ggacggacaacctcagccgcctcgaggcccagcggaacgtcctcaa 20756
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 157 bits (79), Expect = 5e-35 Identities = 126/142 (88%) Strand = Plus / Plus Query: 425 ccagaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaagataacccct 484 |||||||| |||||||| |||||| | ||| |||||||||||||||||||| | | ||| Sbjct: 137442 ccagaaggaaaatatgttgttgatgtcgataaaagtattgatattacaaagctctcgcct 137501 Query: 485 tcaacaagagttgctcttcggaacgacagctacatgcttcaccttatcctgcccagcana 544 |||||||||||||||||||| || |||||||| |||||||| |||||||||||||||| | Sbjct: 137502 tcaacaagagttgctcttcgaaatgacagctatatgcttcatcttatcctgcccagcaaa 137561 Query: 545 gtcgatccactggttaatctta 566 || |||||| |||||||||||| Sbjct: 137562 gttgatccattggttaatctta 137583 Score = 111 bits (56), Expect = 3e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 333 gggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggttgtgaaggtta 392 ||||||||||| || |||| || |||||||||||||||||||| |||||||| ||||||| Sbjct: 136876 gggaagagttgaaggtgctccatgaaccgggctcatatgttggtgaggttgtcaaggtta 136935 Query: 393 tgggcaagtcaaaggttctagtcaaggt 420 |||||||||| ||||||||||| ||||| Sbjct: 136936 tgggcaagtccaaggttctagtgaaggt 136963 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/106 (86%), Gaps = 4/106 (3%) Strand = Plus / Plus Query: 209 gggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccggaccaag 268 |||||||| | |||||||| | || ||||||||||||||||||||||||||| ||||| Sbjct: 136442 gggctgcggccgtactaccagtcgcgcatccacgacctgcagctccagatccg--ccaag 136499 Query: 269 --acgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaa 312 ||| ||||||||| |||||||||||||||||| |||| |||||| Sbjct: 136500 ggacggacaacctcagccgcctcgaggcccagcggaacgtcctcaa 136545 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 332 cgggaagagttgcagctgcttcaaga 357 |||||||||||||||||||||||||| Sbjct: 113490 cgggaagagttgcagctgcttcaaga 113515
>gb|BT014543.1| Lycopersicon esculentum clone 133958F, mRNA sequence Length = 1616 Score = 145 bits (73), Expect = 2e-31 Identities = 285/356 (80%) Strand = Plus / Plus Query: 203 ggggaggggctgcgccagtactacctgcagcacatccacgacctgcagctccagatccgg 262 ||||| |||||| | |||||||| ||||||| ||||| || || |||||||| |||| Sbjct: 142 ggggaagggctgagacagtactatatgcagcatatccatgatctccagctccaagtccgc 201 Query: 263 accaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgtt 322 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||| || Sbjct: 202 gtaaagactcacaatcttaatcgccttgaggcccagcggaacgaactcaattctaaagtg 261 Query: 323 agaatgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggtt 382 ||||||||| || || || ||| |||||||||| || || ||||||||||| || ||| Sbjct: 262 agaatgctcaaagaggaattacagttgcttcaagagcctggatcatatgttggtgaagtt 321 Query: 383 gtgaaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtc 442 || || || ||||| |||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 322 gttaaagtaatggggaagtcaaaggttctagtcaaagttcatcctgaaggcaagtatgtt 381 Query: 443 gttgatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctctt 502 || ||| ||| ||| |||||||||||||||||| || || ||||| ||||||||||| Sbjct: 382 gtcgatattggcaaaaatattgatattacaaagatcactccatcaactagagttgctctg 441 Query: 503 cggaacgacagctacatgcttcaccttatcctgcccagcanagtcgatccactggt 558 || || || ||||| | ||||| || || ||||||||| ||| |||||| |||| Sbjct: 442 cgaaatgatagctatgtccttcatctaattttgcccagcaaagttgatccattggt 497
>emb|AJ251819.1|FSY251819 Fagus sylvatica mRNA for 26S proteasome subunit 8 (Tat binding protein) (a1 gene) Length = 1639 Score = 135 bits (68), Expect = 2e-28 Identities = 203/248 (81%) Strand = Plus / Plus Query: 266 aagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgttaga 325 ||||| ||||| ||||||||||||||||||||||| ||||| |||| ||||| || ||| Sbjct: 218 aagacccacaatctcaaccgcctcgaggcccagcgtaacgagttcaattctcgagtgaga 277 Query: 326 atgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggttgtg 385 ||||| ||||||| | ||||| || || || || || ||||||||||| || ||||| Sbjct: 278 atgctaagggaagaactacagctactccaggagcctggatcatatgttggtgaagttgtc 337 Query: 386 aaggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtcgtt 445 || || ||||| ||| |||||| |||| ||||||||| | ||||| |||||||| ||| Sbjct: 338 aaagtaatggggaagaataaggttttagttaaggttcattctgaaggaaaatatgttgtt 397 Query: 446 gatcttgatgaaagtattgatattacaaagataaccccttcaacaagagttgctcttcgg 505 || | ||| ||| |||||| || ||||||||||| || |||||||||||||||||||| Sbjct: 398 gacatcgataaaaatattgacatcacaaagataactccatcaacaagagttgctcttcgc 457 Query: 506 aacgacag 513 || ||||| Sbjct: 458 aatgacag 465
>dbj|AB035272.2| Matricaria chamomilla McTBP1 mRNA for TAT-binding protein homolog, complete cds Length = 1540 Score = 111 bits (56), Expect = 3e-21 Identities = 152/184 (82%) Strand = Plus / Plus Query: 334 ggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggttgtgaaggttat 393 |||||||||||||||||||||||| || || || |||||||| || ||||| || || || Sbjct: 321 ggaagagttgcagctgcttcaagagcccgggtcttatgttggtgaagttgtcaaagtgat 380 Query: 394 gggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtcgttgatcttga 453 ||||||||| || || ||||||||||| || ||||| || |||||||| |||||| | || Sbjct: 381 gggcaagtcgaaagtactagtcaaggtgcacccagagggtaaatatgtggttgatatcga 440 Query: 454 tgaaagtattgatattacaaagataaccccttcaacaagagttgctcttcggaacgacag 513 |||| |||||||| || |||||||| || ||||| ||||| || || || || ||||| Sbjct: 441 caaaagcattgatatcactaagataactccatcaaccagagtagccctccgcaatgacag 500 Query: 514 ctac 517 |||| Sbjct: 501 ctac 504
>ref|NM_122006.2| Arabidopsis thaliana ATSUG1; ATPase AT5G19990 (ATSUG1) mRNA, complete cds Length = 1521 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 308 ctcaactctcgcgttagaatgctccgggaagagttgcagctgcttcaagaaccgggctca 367 ||||| ||||| || ||||||||| | |||||||| ||||| ||||||||||| || || Sbjct: 293 ctcaattctcgagtgagaatgctcagagaagagttacagctccttcaagaacctgggtcc 352 Query: 368 tatgttggcgaggttgtgaaggttatgggcaagtcaaaggttctagtcaaggttcatcca 427 ||||| || || || || || |||||||| ||| ||||| | || |||||||||||| Sbjct: 353 tatgtgggagaagtggtaaaagttatgggaaagaacaaggtcttggttaaggttcatcca 412 Query: 428 gaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaagataaccccttca 487 || || || ||||| |||||| |||| ||||||| || ||||| || || || || ||| Sbjct: 413 gaggggaagtatgttgttgatattgacaaaagtatagacattacgaaaatcactccatca 472 Query: 488 acaagagttgctcttcg 504 || |||||||||||||| Sbjct: 473 acgagagttgctcttcg 489
>gb|BT009668.1| Arabidopsis thaliana At5g19990 gene, complete cds Length = 1260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 308 ctcaactctcgcgttagaatgctccgggaagagttgcagctgcttcaagaaccgggctca 367 ||||| ||||| || ||||||||| | |||||||| ||||| ||||||||||| || || Sbjct: 190 ctcaattctcgagtgagaatgctcagagaagagttacagctccttcaagaacctgggtcc 249 Query: 368 tatgttggcgaggttgtgaaggttatgggcaagtcaaaggttctagtcaaggttcatcca 427 ||||| || || || || || |||||||| ||| ||||| | || |||||||||||| Sbjct: 250 tatgtgggagaagtggtaaaagttatgggaaagaacaaggtcttggttaaggttcatcca 309 Query: 428 gaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaagataaccccttca 487 || || || ||||| |||||| |||| ||||||| || ||||| || || || || ||| Sbjct: 310 gaggggaagtatgttgttgatattgacaaaagtatagacattacgaaaatcactccatca 369 Query: 488 acaagagttgctcttcg 504 || |||||||||||||| Sbjct: 370 acgagagttgctcttcg 386
>gb|AY065174.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1472 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 308 ctcaactctcgcgttagaatgctccgggaagagttgcagctgcttcaagaaccgggctca 367 ||||| ||||| || ||||||||| | |||||||| ||||| ||||||||||| || || Sbjct: 281 ctcaattctcgagtgagaatgctcagagaagagttacagctccttcaagaacctgggtcc 340 Query: 368 tatgttggcgaggttgtgaaggttatgggcaagtcaaaggttctagtcaaggttcatcca 427 ||||| || || || || || |||||||| ||| ||||| | || |||||||||||| Sbjct: 341 tatgtgggagaagtggtaaaagttatgggaaagaacaaggtcttggttaaggttcatcca 400 Query: 428 gaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaagataaccccttca 487 || || || ||||| |||||| |||| ||||||| || ||||| || || || || ||| Sbjct: 401 gaggggaagtatgttgttgatattgacaaaagtatagacattacgaaaatcactccatca 460 Query: 488 acaagagttgctcttcg 504 || |||||||||||||| Sbjct: 461 acgagagttgctcttcg 477
>gb|AF123395.1|AF123395 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT6a (RPT6a) mRNA, complete cds Length = 1442 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 308 ctcaactctcgcgttagaatgctccgggaagagttgcagctgcttcaagaaccgggctca 367 ||||| ||||| || ||||||||| | |||||||| ||||| ||||||||||| || || Sbjct: 232 ctcaattctcgagtgagaatgctcagagaagagttacagctccttcaagaacctgggtcc 291 Query: 368 tatgttggcgaggttgtgaaggttatgggcaagtcaaaggttctagtcaaggttcatcca 427 ||||| || || || || || |||||||| ||| ||||| | || |||||||||||| Sbjct: 292 tatgtgggagaagtggtaaaagttatgggaaagaacaaggtcttggttaaggttcatcca 351 Query: 428 gaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaagataaccccttca 487 || || || ||||| |||||| |||| ||||||| || ||||| || || || || ||| Sbjct: 352 gaggggaagtatgttgttgatattgacaaaagtatagacattacgaaaatcactccatca 411 Query: 488 acaagagttgctcttcg 504 || |||||||||||||| Sbjct: 412 acgagagttgctcttcg 428
>dbj|AB044348.1| Arabidopsis thaliana AtSUG1 mRNA, complete cds Length = 1547 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 308 ctcaactctcgcgttagaatgctccgggaagagttgcagctgcttcaagaaccgggctca 367 ||||| ||||| || ||||||||| | |||||||| ||||| ||||||||||| || || Sbjct: 293 ctcaattctcgagtgagaatgctcagagaagagttacagctccttcaagaacctgggtcc 352 Query: 368 tatgttggcgaggttgtgaaggttatgggcaagtcaaaggttctagtcaaggttcatcca 427 ||||| || || || || || |||||||| ||| ||||| | || |||||||||||| Sbjct: 353 tatgtgggagaagtggtaaaagttatgggaaagaacaaggtcttggttaaggttcatcca 412 Query: 428 gaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaagataaccccttca 487 || || || ||||| |||||| |||| ||||||| || ||||| || || || || ||| Sbjct: 413 gaggggaagtatgttgttgatattgacaaaagtatagacattacgaaaatcactccatca 472 Query: 488 acaagagttgctcttcg 504 || |||||||||||||| Sbjct: 473 acgagagttgctcttcg 489
>ref|XM_741559.1| Aspergillus fumigatus Af293 proteasome regulatory particle subunit Rpt6 (Afu4g04660) partial mRNA Length = 1170 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaatatgtcgttga 447 |||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 199 aaggttcttgtcaaggtacatccagaaggaaaatatgtcgttga 242
>emb|AL035065.1|SPBC23G7 S.pombe chromosome II cosmid c23G7 Length = 35694 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 407 gttctagtcaaggttcatccagaaggcaaatatgtcgttgat 448 ||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 28285 gttctagtcaaagtccatcctgaaggcaaatatgtcgttgat 28244
>ref|NM_001021776.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC23G7.12c), partial mRNA Length = 1212 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 407 gttctagtcaaggttcatccagaaggcaaatatgtcgttgat 448 ||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 241 gttctagtcaaagtccatcctgaaggcaaatatgtcgttgat 282
>gb|U02280.1|SPU02280 Schizosaccharomyces pombe Let1 (let1) gene, complete cds Length = 1956 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 407 gttctagtcaaggttcatccagaaggcaaatatgtcgttgat 448 ||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 823 gttctagtcaaagtccatcctgaaggcaaatatgtcgttgat 864
>gb|AF220199.1|AF220199 Pinus taeda 26S proteasome regulatory subunit 8 mRNA, complete cds Length = 1747 Score = 58.0 bits (29), Expect = 3e-05 Identities = 242/313 (77%) Strand = Plus / Plus Query: 213 tgcgccagtactacctgcagcacatccacgacctgcagctccagatccggaccaagacgc 272 |||||||||| ||||| || || || ||||| || ||||||||| |||| ||||||| Sbjct: 174 tgcgccagtattaccttcaacatattcacgatctccagctccaggtccgtcagaagacgc 233 Query: 273 acaacctcaaccgcctcgaggcccagcgcaacgacctcaactctcgcgttagaatgctcc 332 |||| || ||||| || || |||||||| ||||| || || || || ||| ||| Sbjct: 234 acaatcttaaccgtcttgaagcccagcgaaacgatcttaattccaaagtgagagcgctga 293 Query: 333 gggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggttgtgaaggtta 392 |||| || || ||| |||| || |||||||| || |||||||| || ||||| || |||| Sbjct: 294 gggaggaattacagttgctccaggaaccgggatcgtatgttggtgaagttgttaaagtta 353 Query: 393 tgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaatatgtcgttgatcttg 452 |||| ||||| || ||| | || ||||| ||||| ||||| || ||||| |||||| | | Sbjct: 354 tggggaagtctaaagttttggttaaggtgcatcctgaaggaaagtatgtagttgatgtag 413 Query: 453 atgaaagtattgatattacaaagataaccccttcaacaagagttgctcttcggaacgaca 512 | | | ||||| || ||||| || || ||||| |||||||| |||||||| || || | Sbjct: 414 acaagaacattgacataacaaaaatcacaccttctacaagagtagctcttcgtaatgata 473 Query: 513 gctacatgcttca 525 ||||| ||||||| Sbjct: 474 gctacgtgcttca 486
>gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16 Length = 84334 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 417 aggttcatccagaaggcaaatatgtcgttgatcttgatgaaagtattgatattacaaaga 476 ||||||||||||| || || ||||| |||||| |||| ||||||| || ||||| || | Sbjct: 41758 aggttcatccagaggggaagtatgttgttgatattgacaaaagtatagacattacgaaaa 41817 Query: 477 taaccccttcaacaagagttgctcttcg 504 | || || ||||| |||||||||||||| Sbjct: 41818 tcactccatcaacgagagttgctcttcg 41845 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 323 agaatgctccgggaagagttgcagctgcttcaagaacc 360 ||||||||| | |||||||| ||||| ||||||||||| Sbjct: 41587 agaatgctcagagaagagttacagctccttcaagaacc 41624 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 324 gaatgctccgggaagagttgcagctgcttcaagaacc 360 |||||||| | |||||||| ||||| ||||||||||| Sbjct: 46234 gaatgctcagagaagagttacagctccttcaagaacc 46270
>emb|CR729418.2|CNS0GPRK Tetraodon nigroviridis full-length cDNA Length = 1325 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaatatgtcgt 444 |||||| | |||||||||||||||||||| |||| |||||| Sbjct: 253 aaggttttggtcaaggttcatccagaaggaaaatttgtcgt 293
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 193 ggccggcggcggggaggggctgcgccag 220 |||||||||||| ||||||||||||||| Sbjct: 4610135 ggccggcggcggtgaggggctgcgccag 4610108
>emb|CR661020.2|CNS0F90I Tetraodon nigroviridis full-length cDNA Length = 1253 Score = 46.1 bits (23), Expect = 0.12 Identities = 89/111 (80%) Strand = Plus / Plus Query: 327 tgctccgggaagagttgcagctgcttcaagaaccgggctcatatgttggcgaggttgtga 386 ||||||| |||||| ||||| | || || || | |||||| || || || |||||||| | Sbjct: 149 tgctccgagaagagctgcagttactccaggagcagggctcctacgtgggagaggttgtca 208 Query: 387 aggttatgggcaagtcaaaggttctagtcaaggttcatccagaaggcaaat 437 ||| |||||||| |||||| | |||||||||||||||||||| |||| Sbjct: 209 gggtcatgggcaaaaagaaggttttggtcaaggttcatccagaaggaaaat 259
>ref|XM_381781.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01605.1) partial mRNA Length = 1170 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 408 ttctagtcaaggttcatccagaaggcaaatatgt 441 |||| |||||||| || ||||||||||||||||| Sbjct: 203 ttctcgtcaaggtgcacccagaaggcaaatatgt 236
>emb|Z98866.1|CEY49E10 Caenorhabditis elegans YAC Y49E10, complete sequence Length = 125590 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 419 gttcatccagaaggcaaatatgtcgt 444 |||||||||||||| ||||||||||| Sbjct: 3403 gttcatccagaaggaaaatatgtcgt 3428
>emb|CR732730.2|CNS0GSBI Tetraodon nigroviridis full-length cDNA Length = 1304 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 248 aaggttttggtcaaggttcatccagaaggaaaat 281
>emb|CR731394.2|CNS0GRAF Tetraodon nigroviridis full-length cDNA Length = 1327 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 253 aaggttttggtcaaggttcatccagaaggaaaat 286
>emb|CR731336.1|CNS0GR8T Tetraodon nigroviridis full-length cDNA Length = 1317 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 250 aaggttttggtcaaggttcatccagaaggaaaat 283
>emb|CR725828.2|CNS0GMZU Tetraodon nigroviridis full-length cDNA Length = 1308 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 250 aaggttttggtcaaggttcatccagaaggaaaat 283
>emb|CR723657.2|CNS0GLBJ Tetraodon nigroviridis full-length cDNA Length = 1326 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 253 aaggttttggtcaaggttcatccagaaggaaaat 286
>emb|CR692841.2|CNS0FXJP Tetraodon nigroviridis full-length cDNA Length = 1293 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 226 aaggttttggtcaaggttcatccagaaggaaaat 259
>emb|CR685755.2|CNS0FS2V Tetraodon nigroviridis full-length cDNA Length = 1286 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 227 aaggttttggtcaaggttcatccagaaggaaaat 260
>emb|CR680649.2|CNS0FO51 Tetraodon nigroviridis full-length cDNA Length = 1339 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 272 aaggttttggtcaaggttcatccagaaggaaaat 305
>gb|DP000038.2| Colobus guereza target 106 genomic scaffold Length = 481828 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 197 ggcggcggggaggggctgcgcc 218 |||||||||||||||||||||| Sbjct: 441694 ggcggcggggaggggctgcgcc 441715
>emb|CR670139.2|CNS0FG1T Tetraodon nigroviridis full-length cDNA Length = 1294 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 226 aaggttttggtcaaggttcatccagaaggaaaat 259
>emb|CR665790.2|CNS0FCP0 Tetraodon nigroviridis full-length cDNA Length = 1320 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 250 aaggttttggtcaaggttcatccagaaggaaaat 283
>emb|CR663468.2|CNS0FAWI Tetraodon nigroviridis full-length cDNA Length = 1318 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 250 aaggttttggtcaaggttcatccagaaggaaaat 283
>emb|CR661954.2|CNS0F9QG Tetraodon nigroviridis full-length cDNA Length = 1317 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 250 aaggttttggtcaaggttcatccagaaggaaaat 283
>emb|CR660954.1|CNS0F8YO Tetraodon nigroviridis full-length cDNA Length = 1326 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 269 aaggttttggtcaaggttcatccagaaggaaaat 302
>emb|CR660030.2|CNS0F890 Tetraodon nigroviridis full-length cDNA Length = 1318 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 250 aaggttttggtcaaggttcatccagaaggaaaat 283
>emb|CR659714.2|CNS0F808 Tetraodon nigroviridis full-length cDNA Length = 1314 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 247 aaggttttggtcaaggttcatccagaaggaaaat 280
>emb|CR656879.2|CNS0F5TH Tetraodon nigroviridis full-length cDNA Length = 1281 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 404 aaggttctagtcaaggttcatccagaaggcaaat 437 |||||| | |||||||||||||||||||| |||| Sbjct: 226 aaggttttggtcaaggttcatccagaaggaaaat 259
>gb|DP000036.1| Papio anubis target 106 genomic scaffold Length = 492848 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 197 ggcggcggggaggggctgcgcc 218 |||||||||||||||||||||| Sbjct: 339710 ggcggcggggaggggctgcgcc 339731
>gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold Length = 583711 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 197 ggcggcggggaggggctgcgcc 218 |||||||||||||||||||||| Sbjct: 458488 ggcggcggggaggggctgcgcc 458509
>ref|NM_067208.3| Caenorhabditis elegans proteasome Regulatory Particle, ATPase-like family member (rpt-6) (rpt-6) mRNA, complete cds Length = 1416 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 419 gttcatccagaaggcaaatatgtcgt 444 |||||||||||||| ||||||||||| Sbjct: 300 gttcatccagaaggaaaatatgtcgt 325
>emb|CT033264.1| Platynereis dumerilii EST IB0AAA23DB12EM1 Length = 944 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 416 aaggttcatccagaaggcaaatatgtcgttgatcttga 453 |||||||| ||||||||||||| ||| |||||| |||| Sbjct: 76 aaggttcacccagaaggcaaatttgttgttgatattga 113
>emb|CT033184.1| Platynereis dumerilii EST IB0AAA25BD05EM1 Length = 900 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 416 aaggttcatccagaaggcaaatatgtcgttgatcttga 453 |||||||| ||||||||||||| ||| |||||| |||| Sbjct: 260 aaggttcacccagaaggcaaatttgttgttgatattga 297
>ref|NM_122007.2| Arabidopsis thaliana RPT6A; ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT5G20000 (RPT6A) mRNA, complete cds Length = 1741 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 324 gaatgctccgggaagagttgcagctgcttcaagaacc 360 |||||||| | |||||||| ||||| ||||||||||| Sbjct: 488 gaatgctcagagaagagttacagctccttcaagaacc 524
>ref|XM_467498.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2597 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cttccggcgagcgtcgacgac 166 ||||||||||||||||||||| Sbjct: 8 cttccggcgagcgtcgacgac 28
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 agcgtcgacgacccgtcggcggcgt 179 |||| |||||||||||||||||||| Sbjct: 87490 agcgacgacgacccgtcggcggcgt 87514
>gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, complete sequence Length = 159722 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 181 ggccaagggcagggccggcggcggggaggggct 213 |||| ||||| ||| |||||||||||||||||| Sbjct: 95323 ggccgagggcgggggcggcggcggggaggggct 95355
>gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosome 7, complete sequence Length = 210387 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 tgatggcggcggtggcgatgg 125 ||||||||||||||||||||| Sbjct: 108792 tgatggcggcggtggcgatgg 108812
>gb|AC144485.2| Gasterosteus aculeatus clone CH213-101E8, complete sequence Length = 203829 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 aaggcaaatatgtcgttgatc 449 ||||||||||||||||||||| Sbjct: 42933 aaggcaaatatgtcgttgatc 42913
>emb|AL356319.18| Human DNA sequence from clone RP11-810G21 on chromosome 13 Contains a CpG island, complete sequence Length = 137260 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 181 ggccaagggcagggccggcggcggggaggggct 213 |||| ||||| ||| |||||||||||||||||| Sbjct: 40773 ggccgagggcgggggcggcggcggggaggggct 40805
>gb|AC007346.6| Homo sapiens chromosome 16 clone RP11-467J12, complete sequence Length = 204130 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 365 tcatatgttggcgaggttgtg 385 ||||||||||||||||||||| Sbjct: 172590 tcatatgttggcgaggttgtg 172610
>gb|AY079403.1| Arabidopsis thaliana putative 26S proteasome AAA-ATPase subunit RPT6a (At5g20000) mRNA, complete cds Length = 1291 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 324 gaatgctccgggaagagttgcagctgcttcaagaacc 360 |||||||| | |||||||| ||||| ||||||||||| Sbjct: 206 gaatgctcagagaagagttacagctccttcaagaacc 242
>gb|AY039965.1| Arabidopsis thaliana putative 26S proteasome AAA-ATPase subunit RPT6a (At5g20000) mRNA, complete cds Length = 1512 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 324 gaatgctccgggaagagttgcagctgcttcaagaacc 360 |||||||| | |||||||| ||||| ||||||||||| Sbjct: 284 gaatgctcagagaagagttacagctccttcaagaacc 320
>gb|AE008911.1| Salmonella typhimurium LT2, section 215 of 220 of the complete genome Length = 20615 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 gtcgatccactggttaatctt 565 ||||||||||||||||||||| Sbjct: 11762 gtcgatccactggttaatctt 11782
>emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigroviridis Length = 265677 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 agggcagggccggcggcgggg 206 ||||||||||||||||||||| Sbjct: 264945 agggcagggccggcggcgggg 264925
>emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence Length = 265677 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 agggcagggccggcggcgggg 206 ||||||||||||||||||||| Sbjct: 264945 agggcagggccggcggcgggg 264925
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ccgtcggcggcgtcggccaag 187 ||||||||||||||||||||| Sbjct: 3453288 ccgtcggcggcgtcggccaag 3453308
>gb|AC007906.8| Homo sapiens chromosome 16 clone RP11-295M3, complete sequence Length = 183257 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 365 tcatatgttggcgaggttgtg 385 ||||||||||||||||||||| Sbjct: 174206 tcatatgttggcgaggttgtg 174186
>gb|AY087503.1| Arabidopsis thaliana clone 36085 mRNA, complete sequence Length = 1475 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 324 gaatgctccgggaagagttgcagctgcttcaagaacc 360 |||||||| | |||||||| ||||| ||||||||||| Sbjct: 280 gaatgctcagagaagagttacagctccttcaagaacc 316
>ref|XM_574374.1| PREDICTED: Rattus norvegicus similar to MKIAA1064 protein (LOC499087), mRNA Length = 1659 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 tgatggcggcggtggcgatgg 125 ||||||||||||||||||||| Sbjct: 651 tgatggcggcggtggcgatgg 631
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cttccggcgagcgtcgacgac 166 ||||||||||||||||||||| Sbjct: 108202 cttccggcgagcgtcgacgac 108222
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_D06 Length = 112768 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cttccggcgagcgtcgacgac 166 ||||||||||||||||||||| Sbjct: 8822 cttccggcgagcgtcgacgac 8842
>dbj|AK069715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031I15, full insert sequence Length = 2597 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cttccggcgagcgtcgacgac 166 ||||||||||||||||||||| Sbjct: 8 cttccggcgagcgtcgacgac 28
>gb|AC148972.4| Mus musculus BAC clone RP24-82J4 from chromosome 7, complete sequence Length = 221912 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 tgatggcggcggtggcgatgg 125 ||||||||||||||||||||| Sbjct: 166068 tgatggcggcggtggcgatgg 166088
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tggcggcggtggcgatggaca 128 ||||||||||||||||||||| Sbjct: 2916441 tggcggcggtggcgatggaca 2916421
>emb|CT033586.1| Platynereis dumerilii EST IB0AAA17DA06EM1 Length = 885 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 413 gtcaaggttcatccagaaggcaaatatgtcgttgatcttga 453 |||||||| || ||||||||||||| ||| |||||| |||| Sbjct: 267 gtcaaggtccacccagaaggcaaatttgttgttgatattga 307
>gb|BC076008.1| Danio rerio deiodinase, iodothyronine, type I, mRNA (cDNA clone MGC:92323 IMAGE:7055017), complete cds Length = 1417 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 cctcaaccgcctcgaggcccagcg 300 |||||| ||||||||||||||||| Sbjct: 374 cctcaaacgcctcgaggcccagcg 351
>ref|XM_469170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 732 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tgatggcggcggtggcgatg 124 |||||||||||||||||||| Sbjct: 376 tgatggcggcggtggcgatg 357
>gb|AE008449.1| Streptococcus pneumoniae R6 section 65 of 184 of the complete genome Length = 11727 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 aagagttgcagctgcttcaa 355 |||||||||||||||||||| Sbjct: 3951 aagagttgcagctgcttcaa 3970
>gb|AC148658.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018P20 map near S6115, complete sequence Length = 139249 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gatggcggcggtggcgatgg 125 |||||||||||||||||||| Sbjct: 19324 gatggcggcggtggcgatgg 19305
>ref|XM_362587.1| Magnaporthe grisea 70-15 hypothetical protein (MG08170.4) partial mRNA Length = 1107 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ggcggcgtcggccaagggca 191 |||||||||||||||||||| Sbjct: 402 ggcggcgtcggccaagggca 421
>gb|AY423628.1| Beet leafhopper transmitted virescence phytoplasma plasmid pBLTVA-2, complete sequence Length = 2587 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gaccaagacgcacaacctca 281 |||||||||||||||||||| Sbjct: 55 gaccaagacgcacaacctca 74
>gb|AY423627.1| Beet leafhopper transmitted virescence phytoplasma plasmid pBLTVA-1, complete sequence Length = 10785 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gaccaagacgcacaacctca 281 |||||||||||||||||||| Sbjct: 55 gaccaagacgcacaacctca 74
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tgatggcggcggtggcgatg 124 |||||||||||||||||||| Sbjct: 25861669 tgatggcggcggtggcgatg 25861650 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggccggcggcggggaggggc 212 |||||||||||||||||||| Sbjct: 9988722 ggccggcggcggggaggggc 9988703
>gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genomic sequence, complete sequence Length = 44761 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tgatggcggcggtggcgatg 124 |||||||||||||||||||| Sbjct: 32612 tgatggcggcggtggcgatg 32593
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tactacctgcagcacatcca 240 |||||||||||||||||||| Sbjct: 2606139 tactacctgcagcacatcca 2606120 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 tccgggaagagttgcagctg 349 |||||||||||||||||||| Sbjct: 899590 tccgggaagagttgcagctg 899571
>gb|AY221259.1| Danio rerio iodothyronine deiodinase type I Deio1 mRNA, partial cds Length = 780 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 cctcaaccgcctcgaggcccagcg 300 |||||| ||||||||||||||||| Sbjct: 338 cctcaaacgcctcgaggcccagcg 315
>emb|CR759953.10| Zebrafish DNA sequence from clone DKEY-68D15 in linkage group 7, complete sequence Length = 162332 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 cctcaaccgcctcgaggcccagcg 300 |||||| ||||||||||||||||| Sbjct: 121649 cctcaaacgcctcgaggcccagcg 121672
>emb|CR847832.18| Zebrafish DNA sequence from clone DKEY-30K23 in linkage group 8, complete sequence Length = 135277 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 cctcaaccgcctcgaggcccagcg 300 |||||| ||||||||||||||||| Sbjct: 44422 cctcaaacgcctcgaggcccagcg 44445
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggccggcggcggggaggggc 212 |||||||||||||||||||| Sbjct: 38638 ggccggcggcggggaggggc 38619
>gb|AC055733.16| Homo sapiens 3 BAC RP11-39E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193425 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggccggcggcggggaggggc 212 |||||||||||||||||||| Sbjct: 149960 ggccggcggcggggaggggc 149941
>gb|AC108101.2| Homo sapiens chromosome 5 clone RP11-125H10, complete sequence Length = 144841 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tattgatattacaaagataa 479 |||||||||||||||||||| Sbjct: 4956 tattgatattacaaagataa 4937
>gb|AC026337.29| Homo sapiens 2 BAC RP11-105E24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171004 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 atgttggcgaggttgtgaag 388 |||||||||||||||||||| Sbjct: 57963 atgttggcgaggttgtgaag 57982
>gb|AC091977.3| Homo sapiens chromosome 5 clone RP11-528L24, complete sequence Length = 183494 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 tgatgaaagtattgatatta 470 |||||||||||||||||||| Sbjct: 166038 tgatgaaagtattgatatta 166019
>gb|AC092280.2| Homo sapiens chromosome 5 clone CTD-2028M21, complete sequence Length = 101502 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tattgatattacaaagataa 479 |||||||||||||||||||| Sbjct: 614 tattgatattacaaagataa 595
>gb|AC026704.5| Homo sapiens chromosome 5 clone CTD-2036P8, complete sequence Length = 89677 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 tgatgaaagtattgatatta 470 |||||||||||||||||||| Sbjct: 36386 tgatgaaagtattgatatta 36367
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 gccctgatggcggcggtggc 120 |||||||||||||||||||| Sbjct: 3863459 gccctgatggcggcggtggc 3863440 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cggccaagggcagggccggcggcg 203 |||||||||||| ||||||||||| Sbjct: 3531203 cggccaagggcatggccggcggcg 3531226
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gatggcggcggtggcgatgg 125 |||||||||||||||||||| Sbjct: 11958698 gatggcggcggtggcgatgg 11958679
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tgatggcggcggtggcgatg 124 |||||||||||||||||||| Sbjct: 25952978 tgatggcggcggtggcgatg 25952959 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggccggcggcggggaggggc 212 |||||||||||||||||||| Sbjct: 9986843 ggccggcggcggggaggggc 9986824
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 tcgaggcccagcgcaacgacctca 311 ||||||| |||||||||||||||| Sbjct: 36252 tcgaggcgcagcgcaacgacctca 36229
>ref|NM_001007283.1| Danio rerio deiodinase, iodothyronine, type I (dio1), mRNA Length = 1417 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 cctcaaccgcctcgaggcccagcg 300 |||||| ||||||||||||||||| Sbjct: 374 cctcaaacgcctcgaggcccagcg 351
>gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, complete sequence Length = 169122 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tattgatattacaaagataa 479 |||||||||||||||||||| Sbjct: 138721 tattgatattacaaagataa 138702
>gb|AC018678.9| Homo sapiens BAC clone RP11-279E17 from 2, complete sequence Length = 169991 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 atgttggcgaggttgtgaag 388 |||||||||||||||||||| Sbjct: 98211 atgttggcgaggttgtgaag 98230
>ref|XM_226449.3| PREDICTED: Rattus norvegicus similar to 4930566A11Rik protein (predicted) (LOC307834), mRNA Length = 1933 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 agggcagggccggcggcggggagg 209 ||||| |||||||||||||||||| Sbjct: 113 agggccgggccggcggcggggagg 90
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 aagagttgcagctgcttcaa 355 |||||||||||||||||||| Sbjct: 771536 aagagttgcagctgcttcaa 771555
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cccgtcggcggcgtcggcca 185 |||||||||||||||||||| Sbjct: 3122006 cccgtcggcggcgtcggcca 3122025
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 cgaggcccagcgcaacgacc 308 |||||||||||||||||||| Sbjct: 4915186 cgaggcccagcgcaacgacc 4915205
>emb|AL136504.2|HS139I22 Homo sapiens chromosome 3 sequence from BAC 139I22 map 3q21 region D3S3607-D3S1587, complete sequence Length = 184983 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggccggcggcggggaggggc 212 |||||||||||||||||||| Sbjct: 127467 ggccggcggcggggaggggc 127448
>dbj|AK064364.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-C01, full insert sequence Length = 1407 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggccggcggcggggaggggc 212 |||||||||||||||||||| Sbjct: 237 ggccggcggcggggaggggc 218
>gb|AF111709.1|AF111709 Oryza sativa subsp. indica Retrosat 1 retrotransposon and Ty3-Gypsy type Retrosat 2 retrotransposon, complete sequences; and unknown genes Length = 52684 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggcggcgtcggccaagggca 191 |||||||||||||||||||| Sbjct: 36635 ggcggcgtcggccaagggca 36616 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggcggcgtcggccaagggca 191 |||||||||||||||||||| Sbjct: 27128 ggcggcgtcggccaagggca 27109
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gatggcggcggtggcgatgg 125 |||||||||||||||||||| Sbjct: 12038005 gatggcggcggtggcgatgg 12037986
>emb|AL929491.5| Mouse DNA sequence from clone RP23-82K8 on chromosome 4, complete sequence Length = 39332 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 519 tgcttcaccttatcctgcccagca 542 |||||||||| ||||||||||||| Sbjct: 7128 tgcttcacctcatcctgcccagca 7151
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 ccgtcggcggcgtcggccaagggc 190 ||||||||||||||||| |||||| Sbjct: 59548 ccgtcggcggcgtcggcgaagggc 59525 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 ccgtcggcggcgtcggccaagggc 190 ||||||||||||||||| |||||| Sbjct: 54301 ccgtcggcggcgtcggcgaagggc 54278
>gb|AC158741.5| Oryctolagus cuniculus, clone Oryctolagus cuniculus-16721457A2, complete sequence Length = 38915 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 gcagggccggcggcggggaggggc 212 |||||||||| ||||||||||||| Sbjct: 7562 gcagggccgggggcggggaggggc 7585
>gb|AC154519.2| Mus musculus BAC clone RP23-216L13 from chromosome 9, complete sequence Length = 209719 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 gttgatcttgatgaaagtat 462 |||||||||||||||||||| Sbjct: 121633 gttgatcttgatgaaagtat 121652
>dbj|AB037768.1| Homo sapiens mRNA for KIAA1347 protein, partial cds Length = 4075 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ggccggcggcggggaggggc 212 |||||||||||||||||||| Sbjct: 48 ggccggcggcggggaggggc 67 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,953,675 Number of Sequences: 3902068 Number of extensions: 3953675 Number of successful extensions: 86128 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 84505 Number of HSP's gapped (non-prelim): 1610 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
