Clone Name | bart11d03 |
---|---|
Clone Library Name | barley_pub |
>UFOG_PETHY (Q43716) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)| (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) Length = 473 Score = 55.1 bits (131), Expect = 1e-07 Identities = 36/120 (30%), Positives = 54/120 (45%) Frame = +2 Query: 176 WLAFGHMLPYLELAERLASRGHRVSYVSTXXXXXXXXXXXXXXXXXVDLVALPLPRVDGL 355 + AFGH+ P+++LA +L+S G +VS+ T +V L LP V+GL Sbjct: 19 FFAFGHISPFVQLANKLSSYGVKVSFF-TASGNASRVKSMLNSAPTTHIVPLTLPHVEGL 77 Query: 356 PDGAESTNDVPDDQRELHWKAFDGLXXXXXXXXXXXXXDEGTRPHWVIADCFHHWVAASA 535 P GAEST ++ EL A D + +PH+V+ D W+ A Sbjct: 78 PPGAESTAELTPASAELLKVALDLMQPQIKTLLSH------LKPHFVLFDFAQEWLPKMA 131
>XYLA_STRRO (P22857) Xylose isomerase (EC 5.3.1.5)| Length = 393 Score = 33.1 bits (74), Expect = 0.61 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +3 Query: 207 WSSPSGWRRGGTAC--PTSPRPATSRVSRRCARPQRREWTSWPSR 335 W+S G R P P T R RR + P R WTSWPSR Sbjct: 297 WASAEGCMRNYLILKQPRPPSAPTRRCRRRASAP--RVWTSWPSR 339
>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB| Length = 142 Score = 33.1 bits (74), Expect = 0.61 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = +3 Query: 159 ASWSSPGSRSATCSRTWSSPSGWRR--GGTACPTSPR-PATSRVSRRCA 296 +S SS SRS+ CSR+ S S WR G P +PR ATS V+ C+ Sbjct: 88 SSGSSRRSRSSGCSRSSRSCSCWRSPCGSRCAPPAPRATATSAVTASCS 136
>OLED_STRAT (Q53685) Oleandomycin glycosyltransferase (EC 2.4.1.-)| Length = 430 Score = 31.6 bits (70), Expect = 1.8 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +2 Query: 182 AFGHMLPYLELAERLASRGHRVSY 253 A GH+ P LE+ L +RGHRV+Y Sbjct: 17 AHGHVNPSLEVIRELVARGHRVTY 40
>SC10A_CANFA (O46669) Sodium channel protein type 10 alpha subunit (Sodium| channel protein type X alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.8) (NaNG) Length = 1962 Score = 30.8 bits (68), Expect = 3.0 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -1 Query: 225 SRSASSRYGSMWPNASQGTTTTRSGEEEDPAPSMAGIRSSLGLTTGR 85 S++AS R M P S+G+T + DP S LGLT+GR Sbjct: 461 SKNASERMRRMKPRVSEGSTDDNKSPQSDPYNQRR--MSFLGLTSGR 505
>MOSA_MAIZE (P15268) Autonomous transposable element EN-1 mosaic protein| (Suppressor-mutator system protein) (SPM) Length = 621 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/42 (47%), Positives = 26/42 (61%) Frame = -1 Query: 225 SRSASSRYGSMWPNASQGTTTTRSGEEEDPAPSMAGIRSSLG 100 SRS SR S PN +GTTT+RS +E+ A S+ +R S G Sbjct: 11 SRSRRSRGSSGAPNMFEGTTTSRSRQEQLLA-SLEQMRGSSG 51
>UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)| (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) (Proto-oncogene TRE-2) Length = 1406 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = +3 Query: 171 SPGSRSATCSRT-WSSPSGWRRGGTACPTSPRPATSRVSRRCARPQRR 311 SP S SA S + SPS R+ GT+CP+S + + R R + R Sbjct: 1159 SPSSLSANISSSPKGSPSSSRKSGTSCPSSKNSSPNSSPRTLGRSKGR 1206
>MGT_STRLI (Q54387) Macrolide glycosyltransferase (EC 2.4.1.-)| Length = 418 Score = 30.4 bits (67), Expect = 4.0 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +2 Query: 188 GHMLPYLELAERLASRGHRVSY 253 GH+ P LE+ L +RGHRV+Y Sbjct: 34 GHVNPSLEVIRELVARGHRVTY 55
>TGM3_MOUSE (Q08189) Protein-glutamine gamma-glutamyltransferase E precursor| (EC 2.3.2.13) (TGase E) (TGE) (TG(E)) (Transglutaminase-3) [Contains: Protein-glutamine gamma-glutamyltransferase E 50 kDa noncatalytic chain; Protein-glutamine gamma-glutamyltra Length = 693 Score = 30.0 bits (66), Expect = 5.2 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = -1 Query: 189 PNASQGTTTTRSGEEEDPAPSMAG 118 PNAS G T++R+ E ED PS++G Sbjct: 462 PNASFGATSSRNPEGEDKEPSISG 485
>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) Length = 659 Score = 30.0 bits (66), Expect = 5.2 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = -1 Query: 243 RCPRDASRSASSRYGSMWPNASQGTT--TTRSGEEEDPAPSMAGIRSSLGLTTGRPCA 76 R P ++S + SR S P + T T+ G +E+ A + A +S G+TTG+P A Sbjct: 287 RSPSESSSESRSRSRSPTPGREEKITFITSFGGSDEEAAAAAAAAAAS-GVTTGKPPA 343
>RTBDN_SPETR (Q5DRQ5) Retbindin precursor| Length = 254 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +3 Query: 156 CASWSSPGSRSATCSRTWSSPSGWRRGGTACPT 254 C +W + TC RTW PSG R C T Sbjct: 144 CQNWFATCEADITCGRTWLWPSGKRSCEGRCRT 176
>UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15)| (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32) (Deubiquitinating enzyme 32) (NY-REN-60 antigen) Length = 1604 Score = 29.6 bits (65), Expect = 6.7 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +3 Query: 171 SPGSRSATC-SRTWSSPSGWRRGGTACPTSPRPATSRVSRRCARPQRR 311 SP S SA S SPS R+ GT+CP+S + + R R + R Sbjct: 1361 SPSSLSANIISSPKGSPSSSRKSGTSCPSSKNSSPNSSPRTLGRSKGR 1408
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 29.3 bits (64), Expect = 8.8 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 24/84 (28%) Frame = +3 Query: 156 CASWSSPGSRSATCSRTWSSPSGWRRGGTAC--------------------PTSPRPATS 275 C S ++P + S +T +S S W +AC P SPR AT Sbjct: 502 CTSQNTPRTPSTQADKTTASCSKWEHLRSACTQRDNPRTFSQGCTQKDNPGPPSPRRATQ 561 Query: 276 RVSRRCARPQRRE----WTSWPSR 335 + R P R W S+P R Sbjct: 562 GSNSRNPSPHRTNKDIPWASFPLR 585
>RT10_BRARE (Q5SPH9) Probable mitochondrial ribosomal protein S10| Length = 187 Score = 29.3 bits (64), Expect = 8.8 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = +2 Query: 494 VIADCFH-HWVAASAVEHKVPCAMLLPTAAV 583 V++ FH H+ AASAV+H C L+ T +V Sbjct: 13 VLSKIFHGHFTAASAVQHHTACPRLVHTVSV 43
>ATS16_MOUSE (Q69Z28) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 16) (ADAM-TS 16) (ADAM-TS16) Length = 1222 Score = 29.3 bits (64), Expect = 8.8 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 25/86 (29%) Frame = +3 Query: 156 CASWSSPGSRS----ATCSRTWSSPSGWRRG-----------------GTACPTSPRPAT 272 C S S P + S A CSRT GWR+ TAC + P+P T Sbjct: 979 CNSQSCPPAWSTGPWAECSRTCGK--GWRKRTVACKSTNPSARAQLLHDTACTSEPKPRT 1036 Query: 273 SRVS--RRCARPQRREW--TSWPSRC 338 + +RC + ++ +W ++W S+C Sbjct: 1037 HEICLLKRCHKHKKLQWLVSAW-SQC 1061
>NADK2_ARATH (Q9C5W3) NAD kinase 2, chloroplast precursor (EC 2.7.1.23)| (AtNADK-2) Length = 985 Score = 29.3 bits (64), Expect = 8.8 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 Query: 353 LPDGAESTNDVPDDQRELHWKAFDG 427 LPD A+ +PDD R W +FDG Sbjct: 909 LPDSAKLELKIPDDARSNAWVSFDG 933 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,568,915 Number of Sequences: 219361 Number of extensions: 1044579 Number of successful extensions: 4370 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4368 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)