Clone Name | bart11c12 |
---|---|
Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 72.8 bits (177), Expect = 6e-13 Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Frame = +1 Query: 175 YAVIFNFGDSLVDAGNLVVDGIPEYLATAKLPYGMTYFGYPTGRCSDGRLVVDFIAQELG 354 + IFNFGDS D G G+ A P+G ++FG P GR DGRLV+DFIA+ LG Sbjct: 28 FPAIFNFGDSNSDTG-----GLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLG 82 Query: 355 LPLLPP-SKARNATFHHGANFAITGA 429 LP L + + F HGANFA G+ Sbjct: 83 LPYLSAFLDSVGSNFSHGANFATAGS 108
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 71.2 bits (173), Expect = 2e-12 Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Frame = +1 Query: 175 YAVIFNFGDSLVDAGNLVVDGIPEYLATAKLPYGMTYFGYPTGRCSDGRLVVDFIAQELG 354 + IFNFGDS D G P PYG T+F TGR SDGRL++DFIA+ Sbjct: 32 FPAIFNFGDSNSDTGGKAAAFYP-----LNPPYGETFFHRSTGRYSDGRLIIDFIAESFN 86 Query: 355 LPLLPP-SKARNATFHHGANFAITGAT-ALDTSYFVAKG 465 LP L P + + F HGA+FA G+T L T+ A G Sbjct: 87 LPYLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHG 125
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 44.7 bits (104), Expect = 2e-04 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%) Frame = +1 Query: 184 IFNFGDSLVDAGNLVVDGIPEYLATAKLPYGMTY-FGYPTGRCSDGRLVVDFIAQELGLP 360 +F FGDS+ D GN + + L PYGM + G TGR S+GR+ D+I++ LG+ Sbjct: 126 VFFFGDSIFDTGNN--NNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVK 183 Query: 361 LLPP----------SKARNATFHHGANFAITGATALDTSYFVAKGLGKTVWNSGSLHTQI 510 + P ++ + + G +FA GA L + W ++ Q+ Sbjct: 184 EIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQT--------SESWKVTTMLDQL 235 Query: 511 KWLQEMKPKI 540 + Q+ K ++ Sbjct: 236 TYFQDYKKRM 245
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 41.2 bits (95), Expect = 0.002 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%) Frame = +1 Query: 184 IFNFGDSLVDAGNLVVDGIPEYLATAKLPYGMTY-FGYPTGRCSDGRLVVDFIAQELGLP 360 +F FGDS+ D GN + + + + PYGM + F TGR S+G + D++A+ +G+ Sbjct: 205 VFFFGDSVFDTGN--NNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVK 262 Query: 361 LLPPS----KARNATFHHGANFAITGA 429 + P+ K + G +FA GA Sbjct: 263 EIVPAYLDPKIQPNDLLTGVSFASGGA 289
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 37.7 bits (86), Expect = 0.022 Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Frame = +1 Query: 166 ADKYAVIFNFGDSLVDAGN---LVVDGIPEYLATAKLPYGMTYFGYPTGRCSDGRLVVDF 336 A Y ++ FGDSL D GN VDGI ++ +L DF Sbjct: 22 AHAYNNLYVFGDSLSDGGNNGRYTVDGI---------------------NGTESKLYNDF 60 Query: 337 IAQELGLPLLPPSKARNATFHHGANFAITGATAL 438 IAQ+LG+ L+ K G N+A GATA+ Sbjct: 61 IAQQLGIELVNSKKG-------GTNYAAGGATAV 87
>ITAX_HUMAN (P20702) Integrin alpha-X precursor (Leukocyte adhesion| glycoprotein p150,95 alpha chain) (Leukocyte adhesion receptor p150,95) (Leu M5) (CD11c antigen) Length = 1163 Score = 37.4 bits (85), Expect = 0.029 Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 10/88 (11%) Frame = +1 Query: 193 FGDSLVD-AGNLVVDGIPEYLATAKLPYGMTYFGYPTGRCSDGRLVV--DFIAQELGLPL 363 FGDS+V A + VV G P+ + A G+ GY TG C L V + + LGL L Sbjct: 37 FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSL 96 Query: 364 ---LPPSK--ARNATFHH--GANFAITG 426 PS+ A T HH G N +TG Sbjct: 97 ASTTSPSQLLACGPTVHHECGRNMYLTG 124
>TYSY_ZYMMO (Q9Z671) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 296 Score = 32.0 bits (71), Expect = 1.2 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Frame = +1 Query: 382 RNATFHHGANFAITGATALDTSYFVAKGL--GKTVWNSGSLHTQIKWLQEMKPKICSSPK 555 R+A G F + GA AL GL G VW G +H + +MK ++ P+ Sbjct: 198 RSADVFLGLPFNLVGAAALQAMLADQAGLALGDLVWTGGDVHIYRNHIDQMKEQLAREPR 257 Query: 556 S 558 + Sbjct: 258 A 258
>PHF8_MOUSE (Q80TJ7) PHD finger protein 8| Length = 1023 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/68 (23%), Positives = 26/68 (38%) Frame = -2 Query: 491 PEFHTVLPSPLATK*LVSSAVAPVMAKLAPWWNVALRALDGGSSGSPSSCAMKSTTRRPS 312 P + L L SS+ +P + L WW G SS + + ++R Sbjct: 716 PSTQEAIQGMLCMANLQSSSSSPATSSLQAWWTGGQERSSGSSSSGLGTVSSSPASQRTP 775 Query: 311 EQRPVGYP 288 +RP+ P Sbjct: 776 GKRPIKRP 783
>Y1288_MYCBO (P64784) Hypothetical protein Mb1288c| Length = 419 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -1 Query: 546 AADFGLHLLQPLDLRVQGAGVPHRLAQPLG 457 A FGL +L L+++GAG PH ++P G Sbjct: 178 ATAFGLSILAIAALQLEGAGKPHHTSRPQG 207
>Y1258_MYCTU (P64783) Hypothetical protein Rv1258c/MT1297| Length = 419 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -1 Query: 546 AADFGLHLLQPLDLRVQGAGVPHRLAQPLG 457 A FGL +L L+++GAG PH ++P G Sbjct: 178 ATAFGLSILAIAALQLEGAGKPHHTSRPQG 207
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 392 VALRALDGGSSGSPSSCAMKSTTRRPSEQRPV 297 +A R GG G SS + T RRP E +P+ Sbjct: 2412 IAYRMKGGGQPGGGSSSGTEDTPRRPPEPKPI 2443 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,913,908 Number of Sequences: 219361 Number of extensions: 1052358 Number of successful extensions: 3909 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3901 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)